dan_8

TATACTTTAATTAATTATTTTTTTTTTAGTGGAAGAAAGGCATTTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGATATCGAAAGAATCTATCATAAGACACACGCGGCTATAATCGATGTCCTTAGAGTCTACAAGCTAAAAATTATAGTTAAGAGAGTCCT *********************************.((((((((.((((.((((.(((.((((((((..((((((((.........))...)))))))))))))).))))))).)))).)))).))))..**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M058 embryo	M044 female body	V106 head	V055 head	V105 male body	V039 embryo
..............................................................................................TCATAAGACACACGCGGCTAT...................................................	21	0	1	36449.00	36449	9139	10530	6435	5521	3874	950
..............................................................................................TCATAAGACACACGCGGCTATT..................................................	22	1	1	4808.00	4808	1699	1244	516	505	740	104
..............................................................................................TCATAAGACACACGCGGCTA....................................................	20	0	1	3578.00	3578	1244	794	380	412	595	153
..............................................................................................TCATAAGACACACGCGGCTAC...................................................	21	1	1	3102.00	3102	2759	168	39	54	55	27
..............................................................................................TCATAAGACACACGCGGCTATA..................................................	22	0	1	1954.00	1954	1567	157	38	55	52	85
..............................................................................................TCATAAGACACACGCGGCT.....................................................	19	0	1	1278.00	1278	184	270	457	264	59	44
...............................................................................................CATAAGACACACGCGGCTAT...................................................	20	0	1	884.00	884	19	842	11	8	4	0
..............................................................................................TGATAAGACACACGCGGCTAT...................................................	21	1	1	694.00	694	685	0	0	4	5	0
..............................................................................................TCATAAGACACACGCGGCTATTT.................................................	23	2	1	506.00	506	61	197	76	88	80	4
..............................................................................................TCATAAGAGACACGCGGCTAT...................................................	21	1	1	454.00	454	1	446	0	3	3	1
..............................................................................................TCATAAGACACACGCGGCTATAA.................................................	23	0	1	363.00	363	259	41	2	10	3	48
..............................................................................................TGATAAGACACACGCGGCTAC...................................................	21	2	1	220.00	220	220	0	0	0	0	0
..................................................AGCTAGCGGGTGTTTTATTTGGTA............................................................................................	24	0	1	216.00	216	8	34	150	16	7	1
..............................................................................................TCATAAGAAACACGCGGCTAT...................................................	21	1	1	204.00	204	15	181	2	1	5	0
.............................................................................................ATCATAAGACACACGCGGCTAT...................................................	22	0	1	188.00	188	41	63	35	26	21	2
..............................................................................................TCATAAGACACACGCGGCTATC..................................................	22	1	1	179.00	179	130	11	4	25	3	6
..............................................................................................TCATAAGACACACGCGGCTATAAA................................................	24	1	1	154.00	154	112	21	0	0	1	20
..............................................................................................TCATAAGACACACGCGGCTATTA.................................................	23	1	1	151.00	151	110	11	8	9	5	8
..............................................................................................TCATAAGACACACGCGGCTCT...................................................	21	1	1	148.00	148	0	0	5	122	1	20
..............................................................................................TCATAAGACACACTCGGCTAT...................................................	21	1	1	143.00	143	11	12	76	7	34	3
..............................................................................................TCATAAGACACACGCGGATAT...................................................	21	1	1	141.00	141	0	2	89	19	29	2
..............................................................................................TCATAAGACACACGCGGCTACA..................................................	22	1	1	137.00	137	121	8	0	1	1	6
..............................................................................................TCATAAGACACACGCGGCTAA...................................................	21	1	1	133.00	133	38	12	34	12	32	5
..............................................................................................TCATAAGACACACGCGGC......................................................	18	0	1	131.00	131	40	12	53	25	0	1
..............................................................................................TGATAAGACACACGCGGCTATT..................................................	22	2	1	113.00	113	108	0	0	0	5	0
..............................................................................................TTATAAGACACACGCGGCTAT...................................................	21	1	1	111.00	111	95	0	2	6	8	0
................................................................................................ATAAGACACACGCGGCTAT...................................................	19	0	1	111.00	111	26	26	10	31	14	4
..............................................................................................TCATAAGACACACGCGGCTAG...................................................	21	1	1	110.00	110	14	7	23	23	41	2
..............................................................................................TCATAAGACACACGCGTCTAT...................................................	21	1	1	107.00	107	8	2	64	13	18	2
..............................................................................................TCACAAGACACACGCGGCTAT...................................................	21	1	1	107.00	107	85	2	8	7	3	2
..............................................................................................TCATAAGACACACGAGGCTAT...................................................	21	1	1	106.00	106	24	1	51	11	19	0
..............................................................................................TCAGAAGACACACGCGGCTAT...................................................	21	1	1	105.00	105	91	1	0	11	1	1
...............................................................................................CATAAGACACACGCGGCTATT..................................................	21	1	1	105.00	105	4	96	2	0	3	0
..............................................................................................TGATAAGACACACGCGGCTA....................................................	20	1	1	100.00	100	100	0	0	0	0	0
..............................................................................................TCATAAGATACACGCGGCTAT...................................................	21	1	1	94.00	94	5	72	4	8	5	0
..............................................................................................TCATAAGACACACGCGGCTTT...................................................	21	1	1	86.00	86	11	3	3	62	4	3
..............................................................................................TGATAAGACACACGCGGCTATA..................................................	22	1	1	86.00	86	86	0	0	0	0	0
..............................................................................................GCATAAGACACACGCGGCTAT...................................................	21	1	1	81.00	81	34	28	1	10	5	3
..............................................................................................TCATAAGACACACGCGGCTATG..................................................	22	1	1	75.00	75	9	16	10	18	19	3
..............................................................................................TCATAAGACACACGCGGCTT....................................................	20	1	1	74.00	74	6	21	16	14	16	1
...............................................................................................CATAAGACACACGCGGCTA....................................................	19	0	1	74.00	74	1	69	3	0	1	0
..............................................................................................TCATAAGACACACGCTGCTAT...................................................	21	1	1	69.00	69	19	4	25	8	7	6
..............................................................................................TCATAAGACACACGCGGCCAT...................................................	21	1	1	67.00	67	3	5	8	45	5	1
..............................................................................................TCATAATACACACGCGGCTAT...................................................	21	1	1	66.00	66	16	7	23	5	9	6
..............................................................................................TCATAAGACACACGCGGCC.....................................................	19	1	1	66.00	66	63	0	0	3	0	0
..............................................................................................TCATAAGACACACGCGGCTATTTT................................................	24	2	1	65.00	65	2	34	11	13	5	0
..............................................................................................TCATAAGACACACGCGGCTACT..................................................	22	2	1	64.00	64	28	15	3	5	10	3
..............................................................................................TCATAAGACACAAGCGGCTAT...................................................	21	1	1	63.00	63	29	5	6	7	16	0
..............................................................................................TAATAAGACACACGCGGCTAT...................................................	21	1	1	63.00	63	3	3	27	14	16	0
..............................................................................................CCATAAGACACACGCGGCTAT...................................................	21	1	1	61.00	61	22	13	10	12	2	2
..............................................................................................TCATAGGACACACGCGGCTAT...................................................	21	1	1	58.00	58	18	9	16	11	2	2
..............................................................................................TCATAAGACACACGCGGCTATTG.................................................	23	2	1	58.00	58	0	10	24	14	10	0
..............................................................................................TCATAAGACACACGCGGCTGT...................................................	21	1	1	56.00	56	4	4	6	37	1	4
..............................................................................................TCATAAGACAAACGCGGCTAT...................................................	21	1	1	53.00	53	36	0	2	4	10	1
..............................................................................................TCAAAAGACACACGCGGCTAT...................................................	21	1	1	52.00	52	49	0	0	2	1	0
..............................................................................................TCATAAGACACACGCGGCGAT...................................................	21	1	1	49.00	49	2	0	0	45	0	2
..............................................................................................TCATAAGCCACACGCGGCTAT...................................................	21	1	1	49.00	49	39	1	1	6	1	1
.............................................................................................ATCATAAGACACACGCGGCT.....................................................	20	0	1	47.00	47	0	9	30	5	3	0
..............................................................................................TCATAAGACACACGCAGCTAT...................................................	21	1	1	44.00	44	3	5	6	10	12	8
..............................................................................................TCATAAGAGACACGCGGCTATT..................................................	22	2	1	43.00	43	0	43	0	0	0	0
..............................................................................................TCATAAGACACACACGGCTAT...................................................	21	1	1	43.00	43	7	10	7	9	10	0
..............................................................................................TCATAAGACACACGCGGCTATTAA................................................	24	2	1	41.00	41	23	7	0	3	1	7
..............................................................................................TCATAAGGCACACGCGGCTAT...................................................	21	1	1	40.00	40	4	10	11	12	1	2
..............................................................................................TCATAAGACACATGCGGCTAT...................................................	21	1	1	40.00	40	2	3	10	12	13	0
...............................................................................................CATAAGACGCACGCGGCTAT...................................................	20	1	1	39.00	39	0	39	0	0	0	0
..............................................................................................TCGTAAGACACACGCGGCTAT...................................................	21	1	1	39.00	39	4	3	22	7	2	1
..............................................................................................TCATAAGACACACGCCGCTAT...................................................	21	1	1	38.00	38	1	0	6	14	7	10
..............................................................................................TCATAAGACACACGCGCCTAT...................................................	21	1	1	37.00	37	3	6	4	22	0	2
..............................................................................................TCATAAGACACACGCGACTAT...................................................	21	1	1	36.00	36	4	0	10	15	5	2
..................................................AGCTAGCGGGTGTTTTATTTGG..............................................................................................	22	0	1	36.00	36	0	14	14	4	4	0
..............................................................................................ACATAAGACACACGCGGCTAT...................................................	21	1	1	36.00	36	18	6	0	8	4	0
..............................................................................................TCATAAGACACGCGCGGCTAT...................................................	21	1	1	35.00	35	2	5	6	4	17	1
..............................................................................................TCATAAGAGACACGCGGCTA....................................................	20	1	1	34.00	34	0	32	0	1	1	0
..............................................................................................TCATAAGAAACACGCGGCTATT..................................................	22	2	1	34.00	34	4	28	0	0	2	0
.............................................................................................CTCATAAGACACACGCGGCTAT...................................................	22	1	1	32.00	32	7	12	4	6	2	1
..............................................................................................TCATAAGACACACGCGGCTATAT.................................................	23	1	1	32.00	32	6	14	6	4	2	0
..............................................................................................TCAGAAGACACACGCGGCTAC...................................................	21	2	1	28.00	28	28	0	0	0	0	0
...............................................................................................CATAAGACACACGCGGCT.....................................................	18	0	1	28.00	28	1	26	0	1	0	0
..................................................AGCTAGCGGGTGTTTTATTTGGT.............................................................................................	23	0	1	28.00	28	2	5	18	3	0	0
..............................................................................................TCATAACACACACGCGGCTAT...................................................	21	1	1	27.00	27	4	6	7	6	3	1
..............................................................................................TCATAAGACGCACGCGGCTAT...................................................	21	1	1	27.00	27	6	4	9	5	2	1
..............................................................................................TCATAAGACACACCCGGCTAT...................................................	21	1	1	27.00	27	1	3	0	13	8	2
.............................................................................................ATCATAAGACACACGCGGCTA....................................................	21	0	1	27.00	27	6	5	6	2	8	0
..............................................................................................TCACAAGACACACGCGGCTAC...................................................	21	2	1	26.00	26	25	0	0	0	0	1
..................................................AGCTAGCGGGTGTTTTATTTG...............................................................................................	21	0	1	25.00	25	0	18	5	1	1	0
..............................................................................................TCACAAGACACACGCGGCTATT..................................................	22	2	1	25.00	25	23	0	1	1	0	0
..............................................................................................TCATAAGACACACGCGGGTAT...................................................	21	1	1	23.00	23	0	1	1	18	0	3
..............................................................................................TCATAAGACATACGCGGCTAT...................................................	21	1	1	23.00	23	6	3	2	0	12	0
..............................................................................................TCATAAGACACACGCGGCTATGT.................................................	23	2	1	23.00	23	1	7	10	4	1	0
..................................................AGCTAGCGGGTGTTTTATTT................................................................................................	20	0	1	23.00	23	0	21	1	0	1	0
..............................................................................................TCATAAAACACACGCGGCTAT...................................................	21	1	1	22.00	22	4	6	5	2	1	4
..............................................................................................TCATAAGACACACGCGGCTACAA.................................................	23	1	1	22.00	22	17	3	0	0	0	2
..............................................................................................TCATAAGACACCCGCGGCTAT...................................................	21	1	1	22.00	22	4	0	2	5	9	2
..............................................................................................TCATGAGACACACGCGGCTAT...................................................	21	1	1	22.00	22	2	1	8	8	2	1
..............................................................................................TCATAAGACACACGCGGCTATAAAA...............................................	25	2	1	21.00	21	14	4	0	0	0	3
..............................................................................................TCATAAGACACACGCGGCTAAA..................................................	22	1	1	21.00	21	14	2	0	1	3	1
..............................................................................................TCAGAAGACACACGCGGCTATT..................................................	22	2	1	21.00	21	21	0	0	0	0	0
..............................................................................................TCATAAGAAACACGCGGCTA....................................................	20	1	1	20.00	20	2	17	0	0	1	0
..............................................................................................TTATAAGACACACGCGGCTAC...................................................	21	2	1	19.00	19	19	0	0	0	0	0
..............................................................................................TCATAAGACACACGAGGATAT...................................................	21	2	1	19.00	19	0	0	13	0	6	0
..............................................................................................TCATAAGACACACGCGGCTAGT..................................................	22	2	1	19.00	19	2	1	3	4	9	0
..............................................................................................TCATAAGACACACGAGGCTATT..................................................	22	2	1	19.00	19	6	0	6	2	5	0
..............................................................................................TCATAAGACACTCGCGGCTAT...................................................	21	1	1	19.00	19	0	0	2	2	14	1
..............................................................................................TCATAAGACACACGTGGCTAT...................................................	21	1	1	19.00	19	4	1	9	1	4	0
...............................................................................................CATAAGACACACGCGGCTATA..................................................	21	0	1	19.00	19	4	15	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTC....................................................	20	1	1	18.00	18	2	0	1	7	0	8
..............................................................................................TCCTAAGACACACGCGGCTAT...................................................	21	1	1	17.00	17	10	0	1	3	2	1
...............................................................................................CATAAGACACACGCGGCTAC...................................................	20	1	1	17.00	17	4	13	0	0	0	0
..............................................................................................TCACAAGACACACGCGGCTATA..................................................	22	1	1	17.00	17	17	0	0	0	0	0
...............................................................................................CATAAGACACACGCGGCTATTT.................................................	22	2	1	17.00	17	0	17	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTATTC.................................................	23	2	1	17.00	17	4	6	1	4	2	0
..............................................................................................TCATAAGACACACGCGGCTATAC.................................................	23	1	1	16.00	16	9	0	1	2	1	3
..............................................................................................TCATAAGACACAGGCGGCTAT...................................................	21	1	1	16.00	16	1	3	1	0	11	0
.............................................................................................ATCATAAGACACACGCGGCTAC...................................................	22	1	1	16.00	16	15	1	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTAAT..................................................	22	2	1	16.00	16	0	0	2	2	10	2
..............................................................................................TCATAAGACACACGCGGCTATTGT................................................	24	2	1	16.00	16	0	1	11	4	0	0
..............................................................................................TCATAAGACACACGCGGCTCTT..................................................	22	2	1	16.00	16	0	0	0	11	0	5
..............................................................................................TCAGAAGACACACGCGGCTATA..................................................	22	1	1	15.00	15	15	0	0	0	0	0
..............................................................................................TGATAAGACACACGCGGCTATAA.................................................	23	1	1	15.00	15	15	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTTTT..................................................	22	2	1	15.00	15	2	3	0	10	0	0
..............................................................................................TCATAAGACACACTCGGCTATT..................................................	22	2	1	15.00	15	3	1	6	0	5	0
..............................................................................................TCATAAGACACACGCGGTTAT...................................................	21	1	1	15.00	15	4	2	1	6	1	1
..............................................................................................TCATAAGACAAACGCGGCTAC...................................................	21	2	1	15.00	15	15	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTACC..................................................	22	2	1	15.00	15	13	1	0	1	0	0
..............................................................................................TCATTAGACACACGCGGCTAT...................................................	21	1	1	14.00	14	13	0	0	1	0	0
..............................................................................................TCACAAGACACACGCGGCTA....................................................	20	1	1	14.00	14	11	0	1	1	1	0
..............................................................................................TCAAAAGACACACGCGGCTAC...................................................	21	2	1	14.00	14	14	0	0	0	0	0
..............................................................................................TCATAAGACTCACGCGGCTAT...................................................	21	1	1	14.00	14	10	0	1	0	1	2
..............................................................................................TCATAAGATACACGCGGCTATT..................................................	22	2	1	13.00	13	1	11	0	1	0	0
..............................................................................................TCATAAGACACACGCGGATATT..................................................	22	2	1	13.00	13	1	0	5	5	2	0
..............................................................................................TTATAAGACACACGCGGCTA....................................................	20	1	1	13.00	13	11	0	1	0	1	0
..............................................................................................TCATAAGATACACGCGGCTA....................................................	20	1	1	13.00	13	0	12	0	1	0	0
..............................................................................................TCATAAGCCACACGCGGCTAC...................................................	21	2	1	13.00	13	13	0	0	0	0	0
................................................................................................ATAAGACACACGCGGCTATT..................................................	20	1	1	12.00	12	3	3	0	4	1	1
..............................................................................................TCATAATACACACGCGGCTATT..................................................	22	2	1	12.00	12	5	1	3	1	1	1
..............................................................................................TCATAAGACACACGCGGCTATTTG................................................	24	3	1	12.00	12	0	2	7	3	0	0
..............................................................................................TCATAAGACACACTCGGCTA....................................................	20	1	1	12.00	12	1	0	4	0	7	0
..............................................................................................TCATAAGACACACGCGGCTATTAAA...............................................	25	3	1	12.00	12	9	2	0	0	0	1
..............................................................................................TCATAAGACACACGCGGCTG....................................................	20	1	1	12.00	12	1	0	3	6	1	1
..............................................................................................TCATAAGACACACGCGGCTATTAG................................................	24	2	1	12.00	12	0	0	12	0	0	0
..............................................................................................GCATAAGACACACGCGGCTATT..................................................	22	2	1	11.00	11	5	1	2	2	1	0
...............................................................................................CATAAGACTCACGCGGCTAT...................................................	20	1	1	11.00	11	0	11	0	0	0	0
..............................................................................................TCATAAGACAGACGCGGCTAT...................................................	21	1	1	11.00	11	0	1	2	2	6	0
..............................................................................................TTATAAGACACACGCGGCTATT..................................................	22	2	1	11.00	11	9	0	0	1	1	0
................................................................................................ATAAGACACACGCGGCTA....................................................	18	0	1	11.00	11	1	3	0	5	1	1
..................................................AGCTAGCGGGTGTTTTATTTGGTAG...........................................................................................	25	0	1	11.00	11	0	0	9	0	0	2
..............................................................................................TCATAAGACACACGCGGATA....................................................	20	1	1	11.00	11	0	0	4	0	7	0
..............................................................................................TCATAAGACCCACGCGGCTAT...................................................	21	1	1	11.00	11	1	1	2	6	0	1
..............................................................................................TCATAAGACACACGCGGAT.....................................................	19	1	1	11.00	11	0	0	10	1	0	0
..............................................................................................TCATAAGACACACGCGTCTA....................................................	20	1	1	11.00	11	0	0	1	3	6	1
..............................................................................................TCATAAGACAAACGCGGCTA....................................................	20	1	1	10.00	10	6	0	1	0	3	0
..............................................................................................TGATAAGACACACGCGGCTATTA.................................................	23	2	1	10.00	10	10	0	0	0	0	0
..............................................................................................TCATAATACACACGCGGCTAC...................................................	21	2	1	10.00	10	9	0	0	0	1	0
.............................................................................................TTCATAAGACACACGCGGCTAT...................................................	22	1	1	10.00	10	1	9	0	0	0	0
..............................................................................................TCATAAGACACACGCTGCTATT..................................................	22	2	1	10.00	10	2	0	2	0	5	1
..............................................................................................TCAAAAGACACACGCGGCTATT..................................................	22	2	1	10.00	10	9	0	1	0	0	0
..............................................................................................CCATAAGACACACGCGGCTAC...................................................	21	2	1	10.00	10	9	0	0	1	0	0
..............................................................................................TCATAAGACACACGCGGCTATGA.................................................	23	1	1	10.00	10	0	1	4	4	1	0
..............................................................................................TCATAAGACACAAGCGGCTA....................................................	20	1	1	10.00	10	4	0	1	2	3	0
..............................................................................................TCATAAGACACACGCGGCTATCT.................................................	23	2	1	10.00	10	1	5	1	3	0	0
..............................................................................................TCATAAGACACACGCGGCTTG...................................................	21	2	1	9.00	9	0	0	0	9	0	0
..............................................................................................TGATAAGACACACGCGGCTACA..................................................	22	2	1	9.00	9	9	0	0	0	0	0
..............................................................................................TCATAATACACACGCGGCTA....................................................	20	1	1	9.00	9	4	0	1	0	2	2
..............................................................................................TCATAAGACACACTCGTCTAT...................................................	21	2	1	9.00	9	0	0	7	0	2	0
..............................................................................................TCATAAAACACACGCGGCTATT..................................................	22	2	1	9.00	9	1	0	0	2	4	2
..............................................................................................TCATAAGACACACGCGGCTATTTA................................................	24	3	1	9.00	9	3	0	3	0	1	2
..............................................................................................TCAAAAGACACACGCGGCTATA..................................................	22	1	1	9.00	9	9	0	0	0	0	0
..............................................................................................TGATAAGACACACGCGGCT.....................................................	19	1	1	9.00	9	9	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGTCTATT..................................................	22	2	1	9.00	9	1	1	2	0	4	1
..............................................................................................TCATAAGACACACGCGGCTATCA.................................................	23	1	1	9.00	9	2	1	1	2	0	3
..............................................................................................TCATAAGACACACGAGGCTA....................................................	20	1	1	9.00	9	2	0	5	0	2	0
..............................................................................................TAATAAGACACACGCGGCTA....................................................	20	1	1	9.00	9	0	1	4	2	2	0
..............................................................................................TCATAAGACACCCGCGGCTATT..................................................	22	2	1	9.00	9	1	0	0	1	7	0
..............................................................................................TCATAAGACAAACGCGGCTATA..................................................	22	1	1	9.00	9	7	0	0	1	1	0
...............................................................................................CATAAGACCCACGCGGCTAT...................................................	20	1	1	9.00	9	0	9	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTATAG.................................................	23	1	1	9.00	9	0	5	3	1	0	0
..............................................................................................TTATAAGACACACGCGGCTATA..................................................	22	1	1	9.00	9	9	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGCCTATT..................................................	22	2	1	8.00	8	4	0	1	2	0	1
..............................................................................................TCATAAGACACACGCGGCTATTAT................................................	24	1	1	8.00	8	1	2	4	1	0	0
..............................................................................................TCATAAGACACACTCGGCT.....................................................	19	1	1	8.00	8	0	0	6	0	2	0
..............................................................................................TCATAAGACACACGCGGCTAAAA.................................................	23	1	1	8.00	8	8	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTTC...................................................	21	2	1	8.00	8	6	0	0	2	0	0
..............................................................................................TCATAAGACACACGCAGCTA....................................................	20	1	1	8.00	8	1	0	0	1	6	0
..............................................................................................TCATAAGCCACACGCGGCTA....................................................	20	1	1	8.00	8	8	0	0	0	0	0
..............................................................................................TCATAAGTCACACGCGGCTAT...................................................	21	1	1	8.00	8	1	0	1	4	1	1
.............................................................................................ATCATAAGACACACGCGGCTATT..................................................	23	1	1	8.00	8	0	3	4	1	0	0
.............................................................................................GTCATAAGACACACGCGGCTAT...................................................	22	1	1	8.00	8	0	8	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCAAT...................................................	21	1	1	8.00	8	4	0	1	2	0	1
..............................................................................................TCATAAGACACGCGCGGCTATT..................................................	22	2	1	8.00	8	1	1	0	0	5	1
.............................................................................................CTCATAAGACACACGCGGCTAC...................................................	22	2	1	8.00	8	6	1	0	0	1	0
..............................................................................................GCATAAGACACACGCGGCTA....................................................	20	1	1	8.00	8	3	3	0	1	0	1
...............................................................................................CATAAGACGCACGCGGCTATT..................................................	21	2	1	8.00	8	0	8	0	0	0	0
..............................................................................................TCATAAGAGACACGCGGCTATA..................................................	22	1	1	8.00	8	2	6	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCCTT...................................................	21	2	1	8.00	8	0	0	1	7	0	0
.................................................................................................TAAGACACACGCGGCTAT...................................................	18	0	1	8.00	8	3	2	1	1	1	0
..............................................................................................TCATAGGACACACGCGGCTATT..................................................	22	2	1	8.00	8	4	0	2	2	0	0
..............................................................................................TCATAAGACACACGCGTCT.....................................................	19	1	1	8.00	8	0	1	5	2	0	0
.............................................................................................ATCATAAGACACACGCGGCTATA..................................................	23	0	1	8.00	8	7	1	0	0	0	0
..............................................................................................ACATAAGACACACGCGGCTATT..................................................	22	2	1	7.00	7	4	1	0	2	0	0
..............................................................................................TCATAAGACACACGCGGCTATAAT................................................	24	0	1	7.00	7	1	4	1	1	0	0
..............................................................................................TCATAAGAAACACGCGGCTAC...................................................	21	2	1	7.00	7	6	1	0	0	0	0
..............................................................................................CCATAAGACACACGCGGCTA....................................................	20	1	1	7.00	7	4	0	0	1	1	1
..............................................................................................TCATAAGCCACACGCGGCTATA..................................................	22	1	1	7.00	7	7	0	0	0	0	0
..............................................................................................TGATAAGACACACGCGGCTATTT.................................................	23	3	1	7.00	7	7	0	0	0	0	0
.............................................................................................AGCATAAGACACACGCGGCTAT...................................................	22	1	1	7.00	7	6	0	0	1	0	0
..............................................................................................TCATAAGACACACGCGG.......................................................	17	0	1	7.00	7	0	0	0	7	0	0
..............................................................................................TCATAAGACACACGCGCCTA....................................................	20	1	1	7.00	7	1	0	0	3	1	2
..............................................................................................TCATAAGACACAAGCGGCTAC...................................................	21	2	1	7.00	7	7	0	0	0	0	0
..............................................................................................TGATAAGACACACGCGGCTATC..................................................	22	2	1	7.00	7	7	0	0	0	0	0
..............................................................................................TCAGAAGACACACGCGGCTA....................................................	20	1	1	7.00	7	6	0	0	1	0	0
..............................................................................................TCATAAGCCACACGCGGCTATT..................................................	22	2	1	7.00	7	6	0	1	0	0	0
..............................................................................................CCATAAGACACACGCGGCTATT..................................................	22	2	1	7.00	7	2	1	1	3	0	0
..............................................................................................TCATAAGACACACGCGGCTAGA..................................................	22	1	1	7.00	7	4	0	0	2	1	0
..............................................................................................TCATAAGACACACGCGGCGATT..................................................	22	2	1	6.00	6	0	0	0	6	0	0
..............................................................................................TCATAAGACACACGCGGCTGTT..................................................	22	2	1	6.00	6	0	0	1	5	0	0
..............................................................................................TCATAAGACACACGAGGCTATA..................................................	22	1	1	6.00	6	5	0	0	0	0	1
..............................................................................................TCATAAGACACACGAGGCTAC...................................................	21	2	1	6.00	6	6	0	0	0	0	0
..............................................................................................TCATACGACACACGCGGCTAT...................................................	21	1	1	6.00	6	0	0	1	5	0	0
..............................................................................................TCATAAGACACACGCGGT......................................................	18	1	1	6.00	6	0	5	0	1	0	0
.............................................................................................ATAATAAGACACACGCGGCTAT...................................................	22	1	1	6.00	6	4	1	0	1	0	0
..............................................................................................TCATAAGACACACACGGCTATT..................................................	22	2	1	6.00	6	1	1	2	1	0	1
..............................................................................................TCATAAGACACACGCGGCTATGG.................................................	23	2	1	6.00	6	0	1	5	0	0	0
..............................................................................................TCATAAGACACACACGGCTA....................................................	20	1	1	6.00	6	0	1	0	3	2	0
..............................................................................................GCATAAGACACACGCGGCTAC...................................................	21	2	1	6.00	6	5	1	0	0	0	0
..............................................................................................TCAAAAGACACACGCGGCTA....................................................	20	1	1	6.00	6	6	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCCCT...................................................	21	2	1	6.00	6	0	0	0	6	0	0
..............................................................................................TCATAAGAGACACGCGGCTATTT.................................................	23	3	1	6.00	6	0	6	0	0	0	0
..............................................................................................TCATAAGAGACACGCGGCTAC...................................................	21	2	1	6.00	6	0	5	1	0	0	0
................................................................................................ATAAGACACACGCGGCTAC...................................................	19	1	1	6.00	6	5	1	0	0	0	0
..............................................................................................TCATAAGACACACGCCGCTA....................................................	20	1	1	6.00	6	0	0	0	3	3	0
..............................................................................................TCATAAGACACACGCGGCGAC...................................................	21	2	1	6.00	6	5	0	0	1	0	0
..............................................................................................TCATAAGACACACGCTGCT.....................................................	19	1	1	6.00	6	1	0	4	1	0	0
..............................................................................................TCGTAAGACACACGCGGCTATT..................................................	22	2	1	5.00	5	0	0	3	0	2	0
..............................................................................................TCATAAGACACACGCTGCTAC...................................................	21	2	2	5.00	10	9	0	0	0	1	0
..............................................................................................TCATAAGACACACTCGGCTATA..................................................	22	1	1	5.00	5	3	0	1	0	1	0
..............................................................................................TCATAAGAAACACGCGGCTATA..................................................	22	1	1	5.00	5	3	2	0	0	0	0
..............................................................................................TCATAAGACACACGCGGGTTT...................................................	21	2	1	5.00	5	0	0	0	4	0	1
..............................................................................................TCATAAGACACACGCGGCCAC...................................................	21	2	1	5.00	5	1	0	0	3	0	1
..............................................................................................TAATAAGACACACGCGGATAT...................................................	21	2	1	5.00	5	0	0	2	1	2	0
..............................................................................................TCATAAGACACACGCGGCGA....................................................	20	1	1	5.00	5	0	0	0	5	0	0
...............................................................................................CATAAGACACACGCGGCTACT..................................................	21	2	1	5.00	5	1	4	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTATTTTT...............................................	25	3	1	5.00	5	0	4	1	0	0	0
..............................................................................................TCTTAAGACACACGCGGCTAT...................................................	21	1	1	5.00	5	1	0	1	2	0	1
..............................................................................................TCATAAGACAGACGCGGCTATT..................................................	22	2	1	5.00	5	0	0	0	2	3	0
..............................................................................................TCATAAGACACACGCGGCTCTA..................................................	22	1	1	5.00	5	0	0	0	2	0	3
..............................................................................................TCATAAGACACACGCGGCTCTC..................................................	22	2	1	5.00	5	0	0	0	4	0	1
..............................................................................................TAATAAGACACACGCGGCTATT..................................................	22	2	1	5.00	5	0	0	1	2	2	0
...................................................GCTAGCGGGTGTTTTATTTGGTA............................................................................................	23	0	1	5.00	5	0	5	0	0	0	0
..............................................................................................TCATAAGACACACGCGACTA....................................................	20	1	1	5.00	5	2	0	1	1	1	0
..............................................................................................TCATAGGACACACGCGGCTAC...................................................	21	2	1	5.00	5	5	0	0	0	0	0
..............................................................................................TCATAAGCCACACGCGTCTAT...................................................	21	2	1	5.00	5	5	0	0	0	0	0
..............................................................................................TCATATGACACACGCGGCTAT...................................................	21	1	1	5.00	5	1	0	1	2	0	1
..............................................................................................TCATAAGACACACGCGGATATC..................................................	22	2	1	5.00	5	0	0	0	5	0	0
..............................................................................................TCATAAGGCACACGCGGCTATT..................................................	22	2	1	5.00	5	2	1	0	2	0	0
..............................................................................................TGATAAGACACACGCGGCTATAAA................................................	24	2	1	5.00	5	5	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCCA....................................................	20	1	1	5.00	5	1	0	0	4	0	0
..............................................................................................TCATAAGACACTCGCGGCTATT..................................................	22	2	1	5.00	5	0	1	0	0	4	0
..............................................................................................TCATAAGACACACGAGGCT.....................................................	19	1	1	5.00	5	0	0	4	0	0	1
..............................................................................................TCATAAGACAAACGCGGCTATT..................................................	22	2	2	4.50	9	4	0	1	0	4	0
..............................................................................................TCATAAGACTCACGCGGCTAC...................................................	21	2	1	4.00	4	4	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCGAG...................................................	21	2	1	4.00	4	0	0	0	4	0	0
...............................................................................................GATAAGACACACGCGGCTAT...................................................	20	1	1	4.00	4	0	4	0	0	0	0
..............................................................................................TCATAATACACACGCGGCTATA..................................................	22	1	1	4.00	4	4	0	0	0	0	0
...............................................................................................CATAAGACACACGCGGCTACA..................................................	21	1	1	4.00	4	2	2	0	0	0	0
..............................................................................................TCATAAGAGACACGCGGCTATTTT................................................	24	3	1	4.00	4	0	4	0	0	0	0
..............................................................................................TCGTAAGACACACGCGGCTA....................................................	20	1	1	4.00	4	1	0	1	2	0	0
..............................................................................................TCATTAGACACACGCGGCTAC...................................................	21	2	1	4.00	4	4	0	0	0	0	0
..............................................................................................TCATAAGACACACGGGGCTAT...................................................	21	1	1	4.00	4	0	0	1	2	1	0
..............................................................................................TCATAAGACACGCGCGGCTA....................................................	20	1	1	4.00	4	0	0	0	0	3	1
..............................................................................................TGATAAGACAAACGCGGCTAT...................................................	21	2	1	4.00	4	4	0	0	0	0	0
..............................................................................................TCATAAGACACACGCGGCTACAAA................................................	24	2	1	4.00	4	2	2	0	0	0	0
..............................................................................................TCATAAGACACACGCGGATAC...................................................	21	2	1	4.00	4	0	0	0	2	2	0
..............................................................................................TCATAAGACACACGCGGCTGTC..................................................	22	2	1	4.00	4	0	0	0	4	0	0
..............................................................................................TCATAAGAGACACGCGGCTATC..................................................	22	2	1	4.00	4	0	4	0	0	0	0
...............................................................................................AATAAGACACACGCGGCTAT...................................................	20	1	1	4.00	4	1	3	0	0	0	0
..............................................................................................ACATAAGACACACGCGGCTATA..................................................	22	1	1	4.00	4	3	1	0	0	0	0
..............................................................................................TCATAAGACACACGCCGCTAC...................................................	21	2	1	4.00	4	0	0	0	2	1	1
..................................................AGATAGCGGGTGTTTTATTTGGTA............................................................................................	24	1	1	4.00	4	2	0	2	0	0	0
..............................................................................................TCATAAGGCACACGCGGCTAC...................................................	21	2	1	4.00	4	2	2	0	0	0	0
..............................................................................................GCATAAGACACACGCGGCGAT...................................................	21	2	1	4.00	4	0	0	0	3	0	1
..........................................................................................GATCTCATAAGACACACGCGGCTAT...................................................	25	3	1	4.00	4	4	0	0	0	0	0
..............................................................................................TCACAAGACACACGCGGCCAT...................................................	21	2	1	4.00	4	0	0	0	4	0	0
..............................................................................................TCATAAGACACACACGGCT.....................................................	19	1	1	4.00	4	0	0	2	2	0	0
..............................................................................................TCATAAGACACACGAGGCTTT...................................................	21	2	1	4.00	4	3	0	0	1	0	0
..............................................................................................TCATAAGACACACGCGGCTATGTT................................................	24	2	1	4.00	4	0	1	2	1	0	0
..............................................................................................TCATAAGACACACGCGGCGGT...................................................	21	2	1	4.00	4	0	0	0	4	0	0
.............................................................................................ATCATAAGACACACGCGGCTATTT.................................................	24	2	1	4.00	4	0	2	2	0	0	0
..............................................................................................TCATAAGACACACTCTGCTAT...................................................	21	2	1	4.00	4	0	0	2	0	1	1
..............................................................................................TCATAAGGCACACGCGGCTA....................................................	20	1	1	4.00	4	3	1	0	0	0	0
..............................................................................................ACATAAGACACACGCGGCTAC...................................................	21	2	1	4.00	4	4	0	0	0	0	0
..............................................................................................TCATAAGACACATGCGGCT.....................................................	19	1	1	4.00	4	0	0	1	3	0	0
..............................................................................................TCATAAGACGCACGCGGCTATT..................................................	22	2	1	4.00	4	0	0	0	2	2	0
.............................................................................................ATCATAAGACACACGCGGCTATTAT................................................	25	1	1	4.00	4	0	1	2	1	0	0
..............................................................................................TCATAAGACACACGCGGCCATT..................................................	22	2	1	4.00	4	2	0	0	2	0	0
.............................................................................................CTCATAAGACACACGCGGCTATT..................................................	23	2	1	4.00	4	3	1	0	0	0	0
..............................................................................................TCATAAGACACCCGCGGCTA....................................................	20	1	1	4.00	4	0	0	1	2	1	0
..............................................................................................TCATAAGATACACGCGGCTGT...................................................	21	2	1	4.00	4	0	0	0	3	0	1
..............................................................................................TCATAAGACACACGCGCCTCT...................................................	21	2	1	4.00	4	0	0	0	4	0	0
..............................................................................................TCATAAGACACACGCGGCTTA...................................................	21	2	1	4.00	4	0	1	2	1	0	0
..............................................................................................TCATAAGACACACGCGGGTCT...................................................	21	2	1	4.00	4	0	0	0	4	0	0
..............................................................................................TCATAAGACACAAGCGGCTATT..................................................	22	2	2	3.50	7	5	0	1	0	1	0

ATATGAAATTAATTAATAAAAAAAAAATCACCTTCTTTCCGTAAACAACGTCGATCGCCCACAAAATAAACCATCGACTATAGCTTTCTTAGATAGTATTCTGTGTGCGCCGATATTAGCTACAGGAATCTCAGATGTTCGATTTTTAATATCAATTCTCTCAGGA **********************************.((((((((.((((.((((.(((.((((((((..((((((((.........))...)))))))))))))).))))))).)))).)))).))))..*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M044 female body	M058 embryo	V055 head
........................................................GCCCACAAGATAAACCGTC...........................................................................................	19	2	3	0.33	1	1	0	0
.......................................................CGACCACAAAATAAACCAA............................................................................................	19	2	16	0.06	1	0	1	0
..............................................................................................GGTCTTCAGTGTGCGCCGA.....................................................	19	3	17	0.06	1	0	0	1
..........................................................CCACAAAATAGGACATCGA.........................................................................................	19	3	20	0.05	1	0	1	0

Species	Coordinate	ID	Type	Alignment
droAna3	scaffold_13117:3438206-3438371 +	dan_8	confident	TATACTT-TA------------------------------------ATT-AATTA--T---------TTTTT------------TTTTA-GTG------G-----AAGAAAGGCATTTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGATA-TC-GAAA-G---AATCTATCATAAGACACACGC------------GGCTATAATCGATGTCCTT----AGAGTCTACA-----------------------------------------------------------------------AGCTAAAAATTATAGTTAA---GAGAGTCCT------
droBip1	scf7180000395895:114508-114676 -			ATTTCTT-CA-----------------------------GGAT--AAT------------------------------------AAAGT-GATTTTCTAA-----GAAGAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGATA-TC-AATA-G---AATCTATCATAAGACACACGC------------GGCTATAATCGATGTCCTT----AAGGTCGACTCTTGACAAAAAATATCAA---------------------------------------------------A--------GATTATACTTAA-----------------G
droKik1	scf7180000302621:197152-197258 -			------------------------------------------------------------------------------------------------------------AAAGGCCTCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGCGC-TC-AAAT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGCTT------AAAACCAACAGTG---------------AC---------------------------------------------------------------------------------T------
droFic1	scf7180000453882:284485-284649 +			TGTC-----------------------------------ATAT----GT-AGGTT--C---------CTTA------------AAAAAA-GTGTCTCT-A-----CTTAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAT-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGTTT------TAAAACGTCA---------------------------------------------------------------------AAGACCAAAGATTGTGTCCAA---A-AAA---T------
droEle1	scf7180000491023:208773-208926 +			AATC-----------------------------------ACTT--GTATTACACT--C----------TCTT-----------TAGGAA-GTGACTTT-G-----CTCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTTT------AATGACTTCA---------------------------------------------------------------------AAA-----AGTTCATG----------------T------
droRho1	scf7180000779985:153686-153885 -			TATC-----------------------------------CGTG----AT-AAACT--C---------TCCA------------TAGGAA-GTGCCAGT-G-----TTCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACAGATGTTT------AAAGACTTCAATG---------------AGTTAAAAACCGAACTGAAAAATCCCCAGCAATATCAGTGTACTGTCCAAA--------------------------TAATCCT------
droBia1	scf7180000298389:100023-100203 +			CTCG-----------------------------------GATT--AAGT-----TCTCTCCACA---TGAGT------------AGAAATGTGCCTTT-A-----TGCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGTTC------GAAGACGTCAGTAGGGTAGA-------------------------------------------------------------A-----AGTTCATAGAAAACCAG-TGGTACT------
droTak1	scf7180000414425:202588-202745 +			CAACCCCC-T------------------------ATTAA---TCG-TA------TCTCTCTACA-------------------GAGAAA-GTGCCATT-A-----TGCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTTA------AATGACGTCG---------------------------------------------------------------------AAA-----------------------AACTCCA------
droEug1	scf7180000409110:915702-915887 +			TTTTCTT-TT----------------CCTA-TATATGTA---C-------------------------------ATACATATATAGAAA-GTGCCATA-AATAACTTAAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATAT-G---AATCTATCATAAGACACACGC------------GGCTATAGCCGATGCTT------AAAGACGTCAGTG---------------TATTGAAAATCGAACT--------------------------------------------------------------AATCTAATTTAC
dm3	chrX:12530329-12530494 +	dme-mir-970	Known_mirbase	CATA-----------------------------------CGAT--AAAT-GGGAT--A---------CGAGT------------TGAAA-GTGCCCATAA-----TCGAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGTTGTCT------AAGAGCTTCA---------------------------------------------------------------------AAAT-CGATAATAACAAACAA---TA-----------AA
droSim2	x:11886899-11887029 +	dsi-mir-970	Known_mirbase	CAAA-----------------------------------CGAT--AAAT-GAGAT--A---------CGAGT------------TGAAA-GTGAACGTAA-----TCGTAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGAAT-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTC-----------------------------------------------------------------------------------------------------------------------------
droSec2	scaffold_21:285054-285214 +	dse_16	confident	CAAA-----------------------------------CGAT--AAAT-GAGAT--A---------CGAGT------------TGAAA-GTGAACGTAA-----TCGAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGAAT-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTCT------AAATGCTTCA---------------------------------------------------------------------AAAT--GATAATTACATT-------A-----------AA
droYak3	X:6807109-6807249 +	dya_13	confident	TGTACTCG-T------------------------ATATACGAT--AGGT-GTAAT--A---------CAAGT------------TGATA-GTGCATTTAA-----TCGAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTC-----------------------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4690:14328978-14329106 -	der_14	confident	CATACC------------------------------------T--AAGT-GTGAT--A---------CGAGT------------TGAAA-GTGCCTTA-A-----TCGAAAGGCATCCGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTC-----------------------------------------------------------------------------------------------------------------------------
dp5	XL_group1a:3316362-3316547 +	dps-mir-970	Known_mirbase	AACAAAC-AAACTAATGCTGCCCAACCCAATCATATGAA---CCG--A------TCACCCCAAAAAGTGAGCAGA-------------------CATC-G-----CGACATGGCATCTGTTGCAGCTAGCGGGTGTTTTATCTGGTAGCTGTAC-CC-TTTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGCCC------AAACCATCCA---------------------------------------------------------------------AGATTCAATAATTA-------------------------
droPer2	scaffold_77:191848-192033 -	dpe_15	confident	TACAAAC-AAACTAATGCTGCCCAACCCAATCATATGAA---CCG--A------TCACCCCAAAAAGTGAGCAGA-------------------CATC-G-----CGACATGGCATCTGTTGCAGCTAGCGGGTGTTTTATCTGGTAGCTGTAC-CC-TTTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGCCC------AAACCATCCA---------------------------------------------------------------------AGATTCAATAATTA-------------------------
droWil2	scf2_1100000004909:1892750-1892913 +	dwi_18	confident	TCTA-----------------------------------CTAT--CCAT------TTTTCTATATAGAGTGTACAA------------------TCGT-A-----TT-CAGGGCATTTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGCAC-TAAAATTTCAATAATCTATCATAAGACACACGC------------GGCTATGACCGATGTCT------TTCTTAGCCA---------------------------------------------------------------------A-------CAATAATAATAAA---AA-----------AA
droVir3	scaffold_13042:2658828-2658943 +	dvi-mir-970	Known_mirbase	ATAC-AT-TG-------------------------------------AT-TTACT--G---------T----------------GAATA-CTATATAG-A-----ACAACTGACGTCTGTTGTAGCCAGCGGATGTTTTATTTGGTAGTTGCGC-TT-TATT-A---AATCTATCATAAGACACACGC------------GGCTATAA-------------------------------------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6328:940425-940586 -			TGAAACTG-G-------------------------------------AT-GAAA---A---------T----------------AATGA-TTG-CATT-G-----TGTA----TATGT-------GTTATGTATGTTATATTTGTATATTAT-C-TA-CTTT-T---AA--TATCAAAAGACAAAGGGTATCCAAGAGGAAGCTATGTAAGATAAAT--GATATTAAATATCAA--------------------------------------------------------------------T--GATAAAGATTACAAAACA---GAAAG---T------
droGri2	scaffold_15203:5475220-5475344 +			TACA-----------------------------------ACTT--AAAGCTAGCT--AT--------CCAGT------------AGAAA-GTCTGCCCAA-----AAAATTGACGTCTGTTGTAGCCTGCGTATGTTTTATTTGGTAGTTGTAACTAAAATC-G---AATCTATCATAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droAna3

TATACTT-TA------------------------------------ATT-AATTA--T---------TTTTT------------TTTTA-GTG------G-----AAGAAAGGCATTTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGATA-TC-GAAA-G---AATCTATCATAAGACACACGC------------GGCTATAATCGATGTCCTT----AGAGTCTACA-----------------------------------------------------------------------AGCTAAAAATTATAGTTAA---GAGAGTCCT------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	36449.00	36449	10530	9139	950	5521	3874	6435
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	4808.00	4808	1244	1699	104	505	740	516
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	3578.00	3578	794	1244	153	412	595	380
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	3102.00	3102	168	2759	27	54	55	39
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	1954.00	1954	157	1567	85	55	52	38
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	1278.00	1278	270	184	44	264	59	457
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	884.00	884	842	19	0	8	4	11
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	506.00	506	197	61	4	88	80	76
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	23	1	363.00	363	41	259	48	10	3	2
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	216.00	216	34	8	1	16	7	150
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	188.00	188	63	41	2	26	21	35
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	179.00	179	11	130	6	25	3	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	24	1	154.00	154	21	112	20	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	133.00	133	12	38	5	12	32	34
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	131.00	131	12	40	1	25	0	53
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	111.00	111	26	26	4	31	14	10
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	110.00	110	7	14	2	23	41	23
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	105.00	105	96	4	0	0	3	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	75.00	75	16	9	3	18	19	10
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	74.00	74	21	6	1	14	16	16
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	74.00	74	69	1	0	0	1	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	66.00	66	0	63	0	3	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	64.00	64	15	28	3	5	10	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	58.00	58	10	0	0	14	10	24
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	47.00	47	9	0	0	5	3	30
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGG....................................................................................................................................................................................................	22	1	36.00	36	14	0	0	4	4	14
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	32.00	32	14	6	0	4	2	6
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	28.00	28	26	1	0	1	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGT...................................................................................................................................................................................................	23	1	28.00	28	5	2	0	3	0	18
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	27.00	27	5	6	0	2	8	6
...........................................................................................................................AGCTAGCGGGTGTTTTATTTG.....................................................................................................................................................................................................	21	1	25.00	25	18	0	0	1	1	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	23	1	23.00	23	7	1	0	4	1	10
...........................................................................................................................AGCTAGCGGGTGTTTTATTT......................................................................................................................................................................................................	20	1	23.00	23	21	0	0	0	1	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAA...................................................................................................................................	25	1	21.00	21	4	14	3	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	19.00	19	1	2	0	4	9	3
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	19.00	19	15	4	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	18.00	18	0	2	8	7	0	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	17.00	17	13	4	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT.....................................................................................................................................	22	1	17.00	17	17	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	17.00	17	6	4	0	4	2	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	23	1	16.00	16	0	9	3	2	1	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	16.00	16	1	15	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	16.00	16	0	0	2	2	10	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	15.00	15	1	13	0	1	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	12.00	12	3	3	1	4	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTG....................................................................................................................................	24	1	12.00	12	2	0	0	3	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	12.00	12	0	1	1	6	1	3
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	11.00	11	3	1	1	5	1	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	11.00	11	0	0	2	0	0	9
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	10.00	10	5	1	0	3	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTG.......................................................................................................................................	21	1	9.00	9	0	0	0	9	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTA....................................................................................................................................	24	1	9.00	9	0	3	2	0	1	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	9.00	9	5	0	0	1	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTC.......................................................................................................................................	21	1	8.00	8	0	6	0	2	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	8.00	8	3	0	0	1	0	4
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	8.00	8	2	3	0	1	1	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	8.00	8	1	7	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAT....................................................................................................................................	24	1	7.00	7	4	1	0	1	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GG...........................................................................................................................................	17	1	7.00	7	0	0	0	7	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGT..........................................................................................................................................	18	1	6.00	6	5	0	0	1	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGG.....................................................................................................................................	23	1	6.00	6	1	0	0	0	0	5
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAC.......................................................................................................................................	19	1	6.00	6	1	5	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTACT......................................................................................................................................	21	1	5.00	5	4	1	0	0	0	0
............................................................................................................................GCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	23	1	5.00	5	5	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	24	1	4.00	4	2	0	0	0	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTA.......................................................................................................................................	21	1	4.00	4	1	0	0	1	0	2

droBip1

ATTTCTT-CA-----------------------------GGAT--AAT------------------------------------AAAGT-GATTTTCTAA-----GAAGAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGATA-TC-AATA-G---AATCTATCATAAGACACACGC------------GGCTATAATCGATGTCCTT----AAGGTCGACTCTTGACAAAAAATATCAA---------------------------------------------------A--------GATTATACTTAA-----------------G	Size	Hit Count	Total Norm	Total
No Reads

droKik1

------------------------------------------------------------------------------------------------------------AAAGGCCTCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGCGC-TC-AAAT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGCTT------AAAACCAACAGTG---------------AC---------------------------------------------------------------------------------T------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGTC-----------------------------------ATAT----GT-AGGTT--C---------CTTA------------AAAAAA-GTGTCTCT-A-----CTTAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAT-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGTTT------TAAAACGTCA---------------------------------------------------------------------AAGACCAAAGATTGTGTCCAA---A-AAA---T------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AATC-----------------------------------ACTT--GTATTACACT--C----------TCTT-----------TAGGAA-GTGACTTT-G-----CTCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTTT------AATGACTTCA---------------------------------------------------------------------AAA-----AGTTCATG----------------T------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TATC-----------------------------------CGTG----AT-AAACT--C---------TCCA------------TAGGAA-GTGCCAGT-G-----TTCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACAGATGTTT------AAAGACTTCAATG---------------AGTTAAAAACCGAACTGAAAAATCCCCAGCAATATCAGTGTACTGTCCAAA--------------------------TAATCCT------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CTCG-----------------------------------GATT--AAGT-----TCTCTCCACA---TGAGT------------AGAAATGTGCCTTT-A-----TGCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGTTC------GAAGACGTCAGTAGGGTAGA-------------------------------------------------------------A-----AGTTCATAGAAAACCAG-TGGTACT------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CAACCCCC-T------------------------ATTAA---TCG-TA------TCTCTCTACA-------------------GAGAAA-GTGCCATT-A-----TGCAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTTA------AATGACGTCG---------------------------------------------------------------------AAA-----------------------AACTCCA------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TTTTCTT-TT----------------CCTA-TATATGTA---C-------------------------------ATACATATATAGAAA-GTGCCATA-AATAACTTAAGAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATAT-G---AATCTATCATAAGACACACGC------------GGCTATAGCCGATGCTT------AAAGACGTCAGTG---------------TATTGAAAATCGAACT--------------------------------------------------------------AATCTAATTTAC	Size	Hit Count	Total Norm	Total
No Reads

dm3

CATA-----------------------------------CGAT--AAAT-GGGAT--A---------CGAGT------------TGAAA-GTGCCCATAA-----TCGAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGTTGTCT------AAGAGCTTCA---------------------------------------------------------------------AAAT-CGATAATAACAAACAA---TA-----------AA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	431794.00	431794	0	0	0	0	237	19	19	12	6	34	20	23	21	54	68	6	0	11	5	0	56	290	18	78	0	70	3020	28	88	126	1979	1646	14	4	7	419	263	556	238	359	21	340	407	294	102	534	170	338	372	715	660	387	82	418	170	50	423	352	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1489	1546	1263	914	377	248	63	122	151	497	1043	1097	125	60	778	895	75	206	2191	426	687	30	20	570	1044	4919	102	1197	1481	2462	2720	634	811	96	144	163	140	394	733	24	2594	319	14	206	4	194	167	572	5	1190	97	1137	1256	0	0	0	0	3	22	2	2	9	0	179	865	810	627	454	697	1538	1392	1178	844	1373	563	946	1101	407	7	3	5	0	0	2106	276	1280	646	413	695	2972	4394	0	2635	62	42	1115	2280	159	2431	125	2619	201	3261	502	104	292	477	2990	59	3562	1066	806	1619	820	22	0	1	1322	28	1340	331	0	0	0	0	0	266	607	5	1	16	2	0	0	3232	2720	1428	515	2021	530	535	2457	1274	2131	1233	3420	1445	2301	2790	8246	26	23	11846	3	1	0	0	477	537	15	430	2265	1253	603	194	197	563	1850	557	459	536	300	498	334	423	968	455	591	844	386	156	183	127	141	2056	520	734	1214	1214	404	432	3150	6735	3951	10820	4886	14555	3316	9908	1218	2001	690	21	326	4787	5075	4337	3760	1495	653	923	532	958	191	1757	3913	1246	2800	2420	463	1650	1158	258	4050	286	3262	6392	4389	6645	5880	3216	445	1550	8503	4586	1403	3302	490	4565	20361	4760	3513	15843	5870	6313	2814	4823	6695	6401	13070	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	28717.00	28717	0	0	0	0	3	0	2	2	1	0	0	0	2	1	3	2	0	4	0	0	0	10	0	12	0	8	110	15	27	30	81	71	3	1	82	18	14	17	16	10	2	26	16	15	8	15	6	8	21	31	25	21	2	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	93	83	41	13	5	2	9	7	19	46	32	2	0	25	17	1	7	48	13	27	0	0	7	19	86	5	25	75	151	123	31	41	3	4	4	1	17	30	5	105	83	3	24	0	7	13	42	2	46	38	57	59	0	0	0	0	0	0	0	0	0	0	11	43	43	23	23	23	37	38	39	39	14	21	29	36	17	1	0	0	1	0	200	66	192	65	68	90	102	241	0	79	41	20	39	120	52	112	41	103	70	134	55	0	45	80	130	9	152	57	39	102	40	3	0	0	59	0	51	11	0	0	0	0	0	4	12	0	0	7	1	0	0	293	255	175	12	89	28	35	53	83	46	29	89	65	48	92	474	3	0	723	0	0	0	0	8	14	1	30	132	82	43	13	4	19	108	21	20	58	15	54	29	17	59	22	40	28	7	4	8	6	5	309	45	29	25	66	35	41	120	265	169	445	163	447	91	258	142	290	35	0	8	365	291	317	250	156	23	57	27	102	18	75	154	51	120	126	36	142	86	57	262	20	160	400	433	535	198	144	51	118	477	214	62	190	53	465	2386	676	571	1242	583	813	266	455	1149	270	2098	0
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.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	9465.00	9465	0	0	0	0	2	0	2	1	1	0	0	0	0	1	4	1	0	0	0	0	0	6	2	3	0	2	12	0	7	5	70	60	0	1	0	15	11	17	13	9	3	14	8	7	1	17	5	9	12	15	13	9	4	0	11	0	33	11	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	10	7	5	13	21	5	4	6	27	8	6	4	0	1	22	1	2	24	9	23	1	1	5	7	157	1	3	20	29	13	12	5	1	0	3	1	1	21	12	56	131	1	67	0	13	27	138	2	46	7	58	54	0	0	0	0	1	0	0	0	0	0	4	41	31	22	16	15	22	38	17	17	10	14	36	26	14	0	0	0	0	0	21	0	3	16	1	6	71	106	0	83	2	0	38	95	7	95	8	119	5	153	25	13	4	0	5	0	123	2	14	11	36	0	0	0	8	1	8	9	0	0	0	0	0	15	30	0	0	0	0	0	0	23	13	8	2	21	4	1	37	9	24	16	48	29	32	55	104	0	0	152	22	10	0	0	1	2	0	17	74	6	3	1	2	10	96	6	15	4	4	5	4	2	24	0	5	6	2	0	0	2	1	20	7	19	4	5	6	8	82	178	89	221	97	305	52	173	16	9	9	0	0	188	153	163	121	91	12	11	10	8	5	47	108	40	101	35	5	30	18	5	22	35	109	272	21	75	29	47	3	9	128	25	21	29	5	62	1179	74	84	364	119	143	14	41	56	50	120	0
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.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTA....................................................................................................................................	24	1	51.00	51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	3	3	0	1	0	4	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTT..................................................................................................................................................................................................	24	1	48.00	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	4	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	0	1	1	1	0	1	0	1	0	0	3	0	0	0	0	0	0	2	2	1	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATT...................................................................................................................................	25	1	46.00	46	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	3	0	0	0	2	0	4	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GG...........................................................................................................................................	17	1	45.00	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	7	1	6	3	4	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAGT...................................................................................................................................	25	1	45.00	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	1	1	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAATT.....................................................................................................................................	23	1	43.00	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	1	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	2	1	0	0	0	0	0	0	1	0	0	0	2	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAGC................................................................................................................................................................................................	26	1	43.00	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	2	0	0	0	1	1	1	0	0	1	0	0	0	0	2	1	1	1	2	1	2	6	0	0	0	2	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	25	1	41.00	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	1	5	0	9	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	24	1	41.00	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	1	0	2	0	4	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	1	0	0	0	0	0	1	0

droSim2

CAAA-----------------------------------CGAT--AAAT-GAGAT--A---------CGAGT------------TGAAA-GTGAACGTAA-----TCGTAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGAAT-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTC-----------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	52310.00	52310	15676	1341	1750	784	1425	8417	4912	5606	4011	2897	626	804	507	3495	4	18	37
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	10128.00	10128	6016	684	377	59	210	1402	280	354	238	211	27	30	9	227	0	0	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	8205.00	8205	3658	120	84	27	100	2987	308	300	248	199	20	12	54	88	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	4278.00	4278	237	13	17	0	672	3281	3	8	3	2	41	0	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	3418.00	3418	2151	201	226	26	0	0	200	136	133	116	76	18	48	86	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	3396.00	3396	2314	281	47	10	52	369	76	76	82	50	24	3	0	12	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	2869.00	2869	1567	154	66	67	0	0	208	191	86	72	26	35	55	338	1	1	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAC....................................................................................................................................	24	1	1620.00	1620	817	18	4	0	26	755	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	23	1	1084.00	1084	1052	28	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	885.00	885	823	20	0	12	0	0	1	1	6	3	0	1	1	17	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	762.00	762	641	20	8	20	0	0	1	1	3	3	0	2	0	63	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	678.00	678	647	13	2	0	0	0	2	4	3	3	1	1	0	2	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	23	1	617.00	617	199	6	1	12	7	105	39	30	104	65	3	2	14	30	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	567.00	567	535	16	3	3	0	0	2	0	5	0	0	1	0	2	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	24	1	540.00	540	28	1	2	7	0	0	64	50	243	135	5	0	2	3	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	535.00	535	160	8	34	7	13	69	44	73	36	25	18	16	7	22	1	1	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAT....................................................................................................................................	24	1	508.00	508	493	7	1	1	0	0	1	0	3	2	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	387.00	387	357	26	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACT....................................................................................................................................	24	1	359.00	359	339	17	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGA....................................................................................................................................	24	1	350.00	350	335	13	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	345.00	345	331	9	1	1	0	0	0	0	0	0	0	0	0	3	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	308.00	308	283	10	2	0	0	6	0	3	0	2	0	1	0	1	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	258.00	258	205	13	5	0	0	18	5	5	4	1	0	1	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	243.00	243	114	12	20	4	0	0	26	19	9	5	2	5	4	22	1	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	199.00	199	140	26	20	4	0	0	4	2	2	0	0	0	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	199.00	199	140	8	0	2	0	0	17	14	8	5	3	0	1	1	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	198.00	198	14	1	3	62	28	74	0	5	0	2	1	0	0	8	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATT....................................................................................................................................	24	1	161.00	161	156	2	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	158.00	158	151	4	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAA...................................................................................................................................	25	1	141.00	141	2	0	1	0	0	0	24	10	69	31	3	0	0	1	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	123.00	123	22	1	18	2	0	2	6	2	0	1	8	26	6	26	3	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACT...................................................................................................................................	25	1	112.00	112	105	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	109.00	109	99	1	0	3	0	0	0	0	0	1	0	0	0	5	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	106.00	106	102	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCG.........................................................................................................................................	19	1	96.00	96	80	13	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTA....................................................................................................................................	24	1	79.00	79	73	2	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	74.00	74	64	7	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCT....................................................................................................................................	24	1	66.00	66	64	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	63.00	63	30	0	4	1	4	13	2	4	1	2	0	0	1	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATA....................................................................................................................................	24	1	59.00	59	57	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	51.00	51	47	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	50.00	50	41	1	2	2	0	0	1	0	2	0	0	0	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGT....................................................................................................................................	24	1	50.00	50	47	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	46.00	46	8	0	2	5	0	3	3	4	1	1	10	6	0	3	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGC..........................................................................................................................................	19	1	44.00	44	4	1	1	0	5	32	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTT...................................................................................................................................	25	1	43.00	43	41	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACA....................................................................................................................................	24	1	42.00	42	38	1	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGT....................................................................................................................................	24	1	40.00	40	39	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCC.........................................................................................................................................	20	1	37.00	37	36	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	37.00	37	2	0	0	3	0	32	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	36.00	36	29	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGG....................................................................................................................................	24	1	34.00	34	33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACTC.....................................................................................................................................	23	1	34.00	34	33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTT....................................................................................................................................	24	1	34.00	34	29	3	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGC.....................................................................................................................................	23	1	33.00	33	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	30.00	30	5	1	0	3	3	18	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	23	1	29.00	29	28	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	25.00	25	20	0	0	0	0	0	2	1	0	1	0	0	0	1	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGG....................................................................................................................................................................................................	22	1	25.00	25	4	0	3	2	0	3	1	6	4	0	0	0	0	1	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCG.....................................................................................................................................	23	1	24.00	24	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	24.00	24	16	4	2	0	0	0	1	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAAA..................................................................................................................................	26	1	23.00	23	0	0	0	0	0	0	1	3	14	4	0	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	22.00	22	14	2	0	0	0	0	1	1	1	0	0	1	0	2	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACCG..................................................................................................................................	26	1	22.00	22	0	0	0	0	1	21	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AGACACACGC------------GGCTAT.......................................................................................................................................	16	1	22.00	22	0	0	0	0	0	0	0	1	0	1	20	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	21.00	21	15	2	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTG....................................................................................................................................	24	1	20.00	20	19	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	18.00	18	13	2	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0
...........................................................................................................................................................................TATCATAAGACACACGC------------GGCT.........................................................................................................................................	21	1	18.00	18	17	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	25	1	17.00	17	0	0	0	0	0	0	3	1	9	3	0	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTA....................................................................................................................................	24	1	16.00	16	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCCT....................................................................................................................................	24	1	15.00	15	13	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAACT.....................................................................................................................................	23	1	13.00	13	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................GCTGAAT-TG-ATTT-G---AATCTA........................................................................................................................................................................	20	1	13.00	13	2	0	0	0	0	1	5	5	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GG...........................................................................................................................................	17	1	13.00	13	0	0	0	0	0	0	0	2	2	0	9	0	0	0	0	0	0
...................................................................................................A-----TCGTAAGGCATCTGTTGC..........................................................................................................................................................................................................................	19	1	12.00	12	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATTT...................................................................................................................................	25	1	11.00	11	8	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GG...........................................................................................................................................	18	1	11.00	11	0	0	0	0	1	10	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCA....................................................................................................................................	24	1	10.00	10	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACTT..................................................................................................................................	26	1	10.00	10	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTT....................................................................................................................................	24	1	10.00	10	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTA....................................................................................................................................	24	1	10.00	10	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGAT...................................................................................................................................	25	1	10.00	10	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACTC..................................................................................................................................	26	1	10.00	10	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................GCTGAAT-TG-ATTT-G---AATCT.........................................................................................................................................................................	19	1	9.00	9	5	0	0	0	0	0	1	0	2	1	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTAT........................................................................................................................................................................................................	18	1	9.00	9	2	0	0	0	2	5	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAAC....................................................................................................................................	23	1	9.00	9	1	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGA....................................................................................................................................	24	1	9.00	9	7	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	23	1	9.00	9	3	1	0	0	1	1	0	2	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAATC.....................................................................................................................................	23	1	9.00	9	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	24	1	9.00	9	3	0	0	0	0	0	0	1	1	4	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTT........................................................................................................................................	21	1	8.00	8	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATACT....................................................................................................................................	25	1	8.00	8	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGG.....................................................................................................................................	23	1	8.00	8	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	7.00	7	0	0	0	0	0	0	0	0	0	0	1	0	2	4	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTG....................................................................................................................................	24	1	7.00	7	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	7.00	7	4	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAATT.....................................................................................................................................	23	1	7.00	7	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACA...................................................................................................................................	25	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCG.........................................................................................................................................	20	1	6.00	6	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	6.00	6	0	0	0	2	0	0	0	0	0	0	0	0	0	4	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACG....................................................................................................................................	24	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	24	1	6.00	6	5	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	6.00	6	1	0	2	1	0	0	2	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAC......................................................................................................................................	22	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGT...................................................................................................................................................................................................	23	1	6.00	6	1	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	5.00	5	0	0	0	0	0	1	0	1	0	0	3	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACC...................................................................................................................................	25	1	5.00	5	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATG......................................................................................................................................	23	1	5.00	5	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTT......................................................................................................................................................................................................	20	1	5.00	5	1	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAG.......................................................................................................................................	22	1	5.00	5	3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................GACACACGC------------GGCTAT.......................................................................................................................................	15	1	5.00	5	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	5.00	5	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------G............................................................................................................................................	16	1	5.00	5	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATT.......................................................................................................................................................................................................	19	1	5.00	5	0	0	0	0	0	4	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTG...................................................................................................................................	25	1	5.00	5	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TATCATAAGACACACGC------------GGCTA........................................................................................................................................	22	1	5.00	5	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAAA...................................................................................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAC....................................................................................................................................	25	1	5.00	5	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGAA...................................................................................................................................	25	1	5.00	5	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATT...................................................................................................................................	25	1	4.00	4	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGG....................................................................................................................................	24	1	4.00	4	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGC.......................................................................................................................................	21	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGAC.........................................................................................................................................	19	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	24	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATC......................................................................................................................................	23	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACG......................................................................................................................................	22	1	4.00	4	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTA...................................................................................................................................	25	1	4.00	4	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCGT....................................................................................................................................	24	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	24	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAGA....................................................................................................................................	23	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	23	1	4.00	4	0	0	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAA.................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	2	0	0	0	1	0	0	1	0	0	0

droSec2

CAAA-----------------------------------CGAT--AAAT-GAGAT--A---------CGAGT------------TGAAA-GTGAACGTAA-----TCGAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGAAT-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTCT------AAATGCTTCA---------------------------------------------------------------------AAAT--GATAATTACATT-------A-----------AA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	24083.00	24083	6527	5524	1241	10791
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	1699.00	1699	359	459	52	829
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	1500.00	1500	306	404	23	767
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	1218.00	1218	77	119	8	1014
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	824.00	824	293	264	31	236
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	741.00	741	58	84	12	587
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	696.00	696	88	104	11	493
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	534.00	534	501	8	2	23
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	23	1	380.00	380	21	46	0	313
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAT....................................................................................................................................	24	1	321.00	321	17	23	1	280
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	304.00	304	58	9	6	231
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	23	1	274.00	274	17	35	1	221
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	260.00	260	21	28	5	206
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	221.00	221	10	23	0	188
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATT....................................................................................................................................	24	1	195.00	195	8	13	1	173
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	193.00	193	10	16	117	50
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	163.00	163	46	30	24	63
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	138.00	138	5	16	2	115
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACT....................................................................................................................................	24	1	138.00	138	10	11	0	117
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	124.00	124	20	26	14	64
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAC....................................................................................................................................	24	1	124.00	124	6	11	1	106
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCT....................................................................................................................................	24	1	113.00	113	4	9	0	100
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	75.00	75	6	15	2	52
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	24	1	70.00	70	5	7	1	57
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	68.00	68	11	8	1	48
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	23	1	59.00	59	1	3	1	54
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGT....................................................................................................................................	24	1	51.00	51	1	2	1	47
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	50.00	50	0	4	0	46
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGT....................................................................................................................................	24	1	50.00	50	1	1	0	48
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGA....................................................................................................................................	24	1	49.00	49	2	2	0	45
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	47.00	47	39	3	1	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	46.00	46	12	11	2	21
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACA....................................................................................................................................	24	1	45.00	45	1	4	0	40
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	45.00	45	5	0	5	35
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATA....................................................................................................................................	24	1	40.00	40	1	3	0	36
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGT...................................................................................................................................................................................................	23	1	40.00	40	5	6	17	12
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	39.00	39	34	1	0	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	38.00	38	1	4	0	33
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGA....................................................................................................................................	24	1	32.00	32	2	2	0	28
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTT....................................................................................................................................	24	1	31.00	31	1	5	0	25
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGG....................................................................................................................................................................................................	22	1	30.00	30	2	9	2	17
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	28.00	28	1	3	0	24
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACT...................................................................................................................................	25	1	28.00	28	1	6	0	21
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	28.00	28	6	11	0	11
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTA....................................................................................................................................	24	1	27.00	27	1	2	0	24
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	25.00	25	22	0	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTT...................................................................................................................................	25	1	23.00	23	3	0	0	20
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATAT...................................................................................................................................	25	1	23.00	23	1	4	0	18
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	23.00	23	7	8	1	7
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	20.00	20	1	5	0	14
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATTT...................................................................................................................................	25	1	19.00	19	0	3	0	16
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCG.....................................................................................................................................	23	1	19.00	19	1	2	0	16
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	18.00	18	3	2	1	12
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	18.00	18	0	9	5	4
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	17.00	17	15	2	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	17.00	17	7	6	0	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCA....................................................................................................................................	24	1	16.00	16	0	1	0	15
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCCT....................................................................................................................................	24	1	13.00	13	0	1	0	12
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	12.00	12	1	0	0	11
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTG....................................................................................................................................	24	1	11.00	11	0	1	0	10
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACTT.....................................................................................................................................	23	1	11.00	11	1	1	0	9
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAT.....................................................................................................................................	21	1	11.00	11	0	0	0	11
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	10.00	10	9	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTT....................................................................................................................................	24	1	10.00	10	1	2	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAT...................................................................................................................................	25	1	10.00	10	3	0	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	10.00	10	1	1	0	8
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTA....................................................................................................................................	24	1	9.00	9	1	0	0	8
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	9.00	9	1	2	0	6
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATT...................................................................................................................................	25	1	8.00	8	0	1	0	7
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	8.00	8	2	1	0	5
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	24	1	7.00	7	2	0	0	5
...................................................................................................A-----TCGAAAGGCATCTGTTGC..........................................................................................................................................................................................................................	19	1	7.00	7	3	0	1	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	7.00	7	0	0	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACAT...................................................................................................................................	25	1	7.00	7	0	0	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCCA....................................................................................................................................	24	1	7.00	7	0	0	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATG....................................................................................................................................	24	1	7.00	7	1	1	0	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCGA....................................................................................................................................	24	1	7.00	7	0	0	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	6.00	6	5	0	0	1
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATTT.....................................................................................................................................	21	1	6.00	6	0	1	0	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTA....................................................................................................................................	24	1	6.00	6	0	0	0	6
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATTG...................................................................................................................................	25	1	6.00	6	0	0	0	6
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTA...................................................................................................................................	25	1	6.00	6	1	0	0	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCGT....................................................................................................................................	24	1	6.00	6	0	0	0	6
...........................................................................................................................AGCTAGCGGGTGTTTTATTTG.....................................................................................................................................................................................................	21	1	5.00	5	0	0	1	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACAA...................................................................................................................................	25	1	5.00	5	1	0	0	4
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATA......................................................................................................................................	20	1	5.00	5	1	1	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATAA...................................................................................................................................	25	1	5.00	5	1	1	0	3
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATCT.....................................................................................................................................	21	1	5.00	5	1	0	0	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAG....................................................................................................................................	24	1	5.00	5	0	0	0	5
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAT.....................................................................................................................................	22	1	5.00	5	5	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGAT...................................................................................................................................	25	1	4.00	4	1	1	0	2
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	4.00	4	1	0	0	3
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAA.....................................................................................................................................	21	1	4.00	4	0	1	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGC.....................................................................................................................................	23	1	4.00	4	1	0	0	3
...................................................................................................................................................GCTGAAT-TG-ATTT-G---AATCTA........................................................................................................................................................................	20	1	4.00	4	1	0	1	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACA...................................................................................................................................	25	1	4.00	4	0	0	0	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAATT.....................................................................................................................................	23	1	4.00	4	0	0	0	4
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAA.....................................................................................................................................	22	1	3.00	3	2	0	0	1
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAAC....................................................................................................................................	22	1	3.00	3	1	0	0	2
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT.....................................................................................................................................	22	1	3.00	3	3	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATATT....................................................................................................................................	25	1	3.00	3	0	0	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATG...................................................................................................................................	25	1	3.00	3	0	0	0	3
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAC.......................................................................................................................................	19	1	3.00	3	0	1	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACTT..................................................................................................................................	26	1	3.00	3	0	1	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATGT...................................................................................................................................	25	1	3.00	3	0	0	0	3
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATCT.....................................................................................................................................	22	1	3.00	3	3	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	3.00	3	0	0	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAA...................................................................................................................................	25	1	3.00	3	0	0	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTG...................................................................................................................................	25	1	3.00	3	0	0	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACCT..................................................................................................................................	26	1	3.00	3	0	0	0	3
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAC.....................................................................................................................................	22	1	2.00	2	2	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	24	1	2.00	2	0	1	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGTT...................................................................................................................................	25	1	2.00	2	0	0	0	2
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	2.00	2	2	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATC......................................................................................................................................	23	1	2.00	2	0	0	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTA.......................................................................................................................................	21	1	2.00	2	0	0	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACG......................................................................................................................................	22	1	2.00	2	0	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACTC.....................................................................................................................................	23	1	2.00	2	0	0	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAACT.....................................................................................................................................	23	1	2.00	2	0	0	0	2

droYak3

TGTACTCG-T------------------------ATATACGAT--AGGT-GTAAT--A---------CAAGT------------TGATA-GTGCATTTAA-----TCGAAAGGCATCTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTC-----------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	26138.00	26138	4943	7348	3832	402	2656	4544	2280	22	6	105	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	2708.00	2708	1860	324	101	11	100	166	132	2	0	12	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	1588.00	1588	518	62	948	3	13	23	21	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	1581.00	1581	427	329	186	19	168	304	143	1	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	1536.00	1536	1054	102	69	8	108	162	33	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	657.00	657	0	634	9	1	2	11	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	563.00	563	404	39	3	3	39	67	7	0	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	502.00	502	109	57	4	0	106	200	25	0	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAC....................................................................................................................................	24	1	429.00	429	375	3	0	0	19	28	4	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	421.00	421	76	62	4	3	99	160	15	0	0	2	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	367.00	367	93	77	75	5	27	68	22	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	23	1	317.00	317	79	39	8	1	63	118	9	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAT....................................................................................................................................	24	1	287.00	287	162	10	0	0	31	71	13	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	271.00	271	181	8	20	1	18	38	5	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	23	1	216.00	216	161	10	0	1	12	26	6	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	174.00	174	100	14	0	0	14	42	4	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	167.00	167	146	7	1	0	3	8	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	164.00	164	81	5	0	0	30	48	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	143.00	143	43	15	0	0	27	53	5	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	23	1	125.00	125	21	9	1	0	33	58	3	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	123.00	123	94	5	0	1	5	16	2	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	109.00	109	2	35	2	3	13	38	16	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	107.00	107	80	8	2	0	3	12	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACT....................................................................................................................................	24	1	102.00	102	68	2	0	0	12	20	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACT...................................................................................................................................	25	1	101.00	101	89	0	0	0	1	9	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	96.00	96	70	6	7	0	3	6	1	0	0	3	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	95.00	95	13	11	1	0	17	50	3	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	91.00	91	68	1	5	0	2	15	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCT....................................................................................................................................	24	1	85.00	85	34	8	0	0	12	26	4	0	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	85.00	85	25	18	0	0	12	24	6	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGT....................................................................................................................................	24	1	82.00	82	29	4	1	0	10	32	6	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	80.00	80	38	5	1	1	11	20	4	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	78.00	78	9	32	5	9	3	13	7	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGT....................................................................................................................................	24	1	76.00	76	22	4	0	0	15	32	3	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	73.00	73	56	1	3	1	6	5	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	72.00	72	72	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	24	1	62.00	62	17	9	0	0	8	23	5	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATT....................................................................................................................................	24	1	45.00	45	14	3	0	0	10	15	3	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACA....................................................................................................................................	24	1	43.00	43	21	7	0	0	5	5	5	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	37.00	37	20	3	1	0	2	10	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGA....................................................................................................................................	24	1	37.00	37	26	1	0	0	1	9	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTA....................................................................................................................................	24	1	34.00	34	18	1	0	0	8	4	3	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	33.00	33	7	0	26	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTT....................................................................................................................................	24	1	32.00	32	9	2	0	0	2	17	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	32.00	32	19	1	0	0	4	8	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCG.....................................................................................................................................	23	1	31.00	31	13	3	0	0	6	9	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	31.00	31	0	29	0	0	0	1	1	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	30.00	30	1	28	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	29.00	29	13	2	2	0	1	5	6	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	28.00	28	22	1	1	0	3	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTG....................................................................................................................................	24	1	28.00	28	15	1	0	0	3	8	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	28.00	28	15	0	0	0	2	11	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	27.00	27	5	1	0	0	3	4	2	0	0	0	12
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	24.00	24	12	2	0	0	4	6	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAG....................................................................................................................................	24	1	24.00	24	4	1	0	0	7	11	1	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGT...................................................................................................................................................................................................	23	1	24.00	24	1	4	5	5	1	5	3	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTA....................................................................................................................................	24	1	21.00	21	10	0	0	0	2	8	1	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCC.........................................................................................................................................	20	1	19.00	19	19	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCG.........................................................................................................................................	19	1	19.00	19	19	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGG.....................................................................................................................................	23	1	18.00	18	12	4	0	0	0	2	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGC.....................................................................................................................................	23	1	17.00	17	14	0	0	0	0	2	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCA....................................................................................................................................	24	1	17.00	17	2	3	0	0	2	9	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	16.00	16	14	1	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	15.00	15	1	13	0	0	0	1	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGG....................................................................................................................................................................................................	22	1	15.00	15	2	3	2	0	1	5	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATA....................................................................................................................................	24	1	14.00	14	7	0	0	0	3	3	1	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCC.........................................................................................................................................	22	1	12.00	12	12	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACC...................................................................................................................................	25	1	11.00	11	10	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATG....................................................................................................................................	24	1	11.00	11	5	1	0	0	1	4	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCCT....................................................................................................................................	24	1	11.00	11	5	1	0	0	1	4	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACA...................................................................................................................................	25	1	10.00	10	7	0	0	0	1	2	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	10.00	10	1	1	0	0	4	2	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	9.00	9	6	0	1	0	2	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAA.....................................................................................................................................	22	1	9.00	9	0	9	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GG...........................................................................................................................................	17	1	9.00	9	0	0	0	0	0	8	0	0	0	1	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	9.00	9	0	3	1	3	0	1	1	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	24	1	9.00	9	2	2	0	0	2	3	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAACT.....................................................................................................................................	23	1	9.00	9	5	0	0	0	1	2	1	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	8.00	8	0	6	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTT...................................................................................................................................	25	1	8.00	8	3	3	0	0	1	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGG....................................................................................................................................	24	1	7.00	7	6	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	7.00	7	2	0	0	0	1	3	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAGT...................................................................................................................................	25	1	7.00	7	2	1	0	0	2	2	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTG....................................................................................................................................	24	1	7.00	7	5	0	0	0	0	2	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATT...................................................................................................................................	25	1	7.00	7	0	2	0	0	1	2	2	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	24	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATA......................................................................................................................................	20	1	6.00	6	0	1	0	0	1	2	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGA....................................................................................................................................	24	1	6.00	6	0	0	0	0	0	6	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGC...................................................................................................................................................................................................	23	1	6.00	6	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAA...................................................................................................................................	25	1	6.00	6	1	3	0	0	2	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATC......................................................................................................................................	23	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	24	1	5.00	5	5	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAATT.....................................................................................................................................	23	1	5.00	5	1	0	0	0	3	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGCT....................................................................................................................................	24	1	5.00	5	2	0	0	0	2	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGTT...................................................................................................................................	25	1	5.00	5	2	1	0	0	1	1	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	5.00	5	0	1	0	0	0	2	2	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	24	1	5.00	5	1	0	0	0	2	2	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTG.....................................................................................................................................................................................................	21	1	5.00	5	0	3	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATG......................................................................................................................................	23	1	5.00	5	4	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAC....................................................................................................................................	25	1	5.00	5	5	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	25	1	5.00	5	2	2	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAT.....................................................................................................................................	22	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TATCATAAGACACACGC------------GGCTA........................................................................................................................................	22	1	4.00	4	3	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATGT.....................................................................................................................................	21	1	4.00	4	0	0	0	0	2	1	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTCC.......................................................................................................................................	21	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGTT.....................................................................................................................................	23	1	4.00	4	3	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAT...................................................................................................................................	25	1	4.00	4	3	1	0	0	0	0	0	0	0	0	0
............................................................................................................................GCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	23	1	4.00	4	0	3	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACTC.....................................................................................................................................	23	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTT....................................................................................................................................	24	1	4.00	4	2	0	0	0	1	0	1	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGC..........................................................................................................................................	19	1	4.00	4	2	0	0	0	1	0	1	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCG.........................................................................................................................................	22	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TATCATAAGACACACGC------------GGCT.........................................................................................................................................	21	1	4.00	4	2	0	0	0	1	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAC......................................................................................................................................	22	1	4.00	4	2	1	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACCT..................................................................................................................................	26	1	3.00	3	2	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	24	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTG....................................................................................................................................	24	1	3.00	3	0	0	0	0	0	3	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGAT...................................................................................................................................	25	1	3.00	3	0	1	0	0	1	1	0	0	0	0	0
...................................................................................................................................................GCTGTAA-TG-ATTT-G---AATCTA........................................................................................................................................................................	20	1	3.00	3	1	0	0	1	0	1	0	0	0	0	0

droEre2

CATACC------------------------------------T--AAGT-GTGAT--A---------CGAGT------------TGAAA-GTGCCTTA-A-----TCGAAAGGCATCCGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGTAA-TG-ATTT-G---AATCTATCATAAGACACACGC------------GGCTATAACCGATGTC-----------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	31844.00	31844	13525	1425	1069	286	4730	10809	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	1545.00	1545	496	52	75	11	238	673	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	1461.00	1461	489	24	47	11	389	501	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	1079.00	1079	1045	5	2	0	11	16	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	831.00	831	179	25	63	2	96	466	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	822.00	822	104	1	74	0	60	583	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	808.00	808	15	9	49	1	132	602	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	757.00	757	171	45	33	9	190	309	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	550.00	550	72	5	58	1	45	369	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	527.00	527	119	0	15	5	75	313	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	507.00	507	140	276	6	1	34	50	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	23	1	507.00	507	78	2	47	1	50	328	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAT....................................................................................................................................	24	1	504.00	504	23	0	52	0	46	383	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGT....................................................................................................................................	24	1	333.00	333	14	0	17	0	3	299	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	284.00	284	36	0	27	0	10	211	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGT....................................................................................................................................	24	1	254.00	254	11	0	14	1	7	221	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	241.00	241	15	0	29	0	10	187	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	23	1	238.00	238	24	0	27	0	5	182	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	231.00	231	19	0	34	0	15	163	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAA....................................................................................................................................	24	1	216.00	216	25	0	20	0	15	150	6
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAC....................................................................................................................................	24	1	161.00	161	13	0	11	0	8	129	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	157.00	157	38	3	7	1	15	93	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	154.00	154	3	1	11	0	20	119	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATT....................................................................................................................................	24	1	145.00	145	12	0	15	0	16	102	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	141.00	141	15	3	8	1	12	102	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	120.00	120	19	0	17	0	9	75	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	114.00	114	20	0	15	0	10	69	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAG....................................................................................................................................	24	1	104.00	104	2	0	4	0	8	90	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGT...................................................................................................................................................................................................	23	1	101.00	101	1	0	4	2	21	68	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	93.00	93	86	0	2	0	0	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCG.....................................................................................................................................	23	1	90.00	90	4	0	4	0	8	74	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAC.....................................................................................................................................	23	1	86.00	86	6	0	11	0	9	60	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	75.00	75	9	3	0	0	4	59	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACT....................................................................................................................................	24	1	71.00	71	3	1	11	0	3	53	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTG....................................................................................................................................	24	1	71.00	71	6	0	1	0	5	59	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	70.00	70	9	1	2	0	20	38	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGG....................................................................................................................................................................................................	22	1	69.00	69	2	0	2	0	10	55	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGA....................................................................................................................................	24	1	68.00	68	5	0	9	0	3	51	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCT....................................................................................................................................	24	1	64.00	64	6	0	3	0	3	52	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTT....................................................................................................................................	24	1	64.00	64	0	0	6	0	1	57	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	63.00	63	4	1	5	1	2	50	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	61.00	61	19	0	7	0	5	30	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGTA....................................................................................................................................	24	1	60.00	60	2	0	1	0	3	54	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGA....................................................................................................................................	24	1	57.00	57	1	0	9	0	6	41	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACT...................................................................................................................................	25	1	54.00	54	3	0	4	0	5	42	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAT...................................................................................................................................	25	1	53.00	53	2	0	4	0	5	42	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	49.00	49	47	0	0	0	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTA....................................................................................................................................	24	1	43.00	43	3	1	5	1	5	28	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	38.00	38	3	2	3	0	6	24	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	37.00	37	10	0	1	0	13	13	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATA....................................................................................................................................	24	1	36.00	36	3	0	8	0	4	21	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACA....................................................................................................................................	24	1	34.00	34	5	0	1	0	3	25	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGC.....................................................................................................................................	23	1	33.00	33	5	0	0	0	1	27	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCGT....................................................................................................................................	24	1	33.00	33	0	0	2	0	2	29	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAGT...................................................................................................................................	25	1	31.00	31	3	0	0	0	1	27	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	31.00	31	0	0	1	0	9	21	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	30.00	30	29	0	0	0	0	1	0
...................................................................................................................................................GCTGTAA-TG-ATTT-G---AATCTA........................................................................................................................................................................	20	1	30.00	30	0	0	1	5	4	20	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	26.00	26	4	0	2	0	8	12	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	25.00	25	0	1	4	0	0	20	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATG....................................................................................................................................	24	1	24.00	24	3	0	2	0	1	18	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	22.00	22	4	0	0	0	2	16	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	22.00	22	22	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATAT...................................................................................................................................	25	1	22.00	22	1	0	1	0	2	18	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAA...................................................................................................................................	25	1	21.00	21	5	0	0	0	1	15	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTCA....................................................................................................................................	24	1	20.00	20	1	0	3	0	1	15	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	19.00	19	3	0	3	0	3	10	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACA...................................................................................................................................	25	1	18.00	18	1	0	1	0	1	15	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTG.....................................................................................................................................................................................................	21	1	17.00	17	1	0	1	0	5	10	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGG.....................................................................................................................................	23	1	17.00	17	2	0	1	0	0	14	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATT...................................................................................................................................	25	1	17.00	17	2	0	2	0	2	11	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGGT....................................................................................................................................	24	1	17.00	17	0	0	0	0	0	17	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCCT....................................................................................................................................	24	1	17.00	17	3	0	5	0	0	9	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	16.00	16	3	0	1	1	1	10	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATGT...................................................................................................................................	25	1	15.00	15	1	0	1	0	2	11	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGTT...................................................................................................................................	25	1	14.00	14	0	0	0	0	0	14	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAT.....................................................................................................................................	22	1	14.00	14	13	0	0	0	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCGA....................................................................................................................................	24	1	13.00	13	1	0	1	0	2	9	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATTGT....................................................................................................................................	22	1	13.00	13	0	0	0	0	0	13	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	13.00	13	2	0	0	0	2	9	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	12.00	12	5	0	1	0	0	6	0
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	12.00	12	4	1	0	0	3	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAAG...................................................................................................................................	25	1	11.00	11	0	0	1	0	0	10	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	24	1	11.00	11	1	0	3	0	1	6	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTT....................................................................................................................................	24	1	11.00	11	1	0	4	0	1	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATTG...................................................................................................................................	25	1	11.00	11	0	0	0	0	0	11	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAATT.....................................................................................................................................	23	1	10.00	10	0	0	3	1	0	6	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	10.00	10	10	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATAG...................................................................................................................................	25	1	9.00	9	1	0	0	0	0	8	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	24	1	9.00	9	0	0	0	0	2	7	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATAA...................................................................................................................................	25	1	8.00	8	1	0	2	0	1	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTGG....................................................................................................................................	24	1	8.00	8	0	0	1	0	0	7	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAA.....................................................................................................................................	22	1	8.00	8	8	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAA.....................................................................................................................................	24	1	8.00	8	1	0	1	0	1	5	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATG......................................................................................................................................	23	1	8.00	8	0	0	1	0	1	6	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAACCT..................................................................................................................................	26	1	8.00	8	0	0	0	0	0	8	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	8.00	8	1	6	0	0	0	1	0
............................................................................................................................GCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	23	1	8.00	8	1	0	1	0	1	5	0
...................................................................................................A-----TCGAAAGGCATCCGTTGC..........................................................................................................................................................................................................................	19	1	8.00	8	3	3	0	0	0	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATTT...................................................................................................................................	25	1	7.00	7	1	0	0	0	0	6	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	7.00	7	6	0	0	0	1	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGCT....................................................................................................................................	24	1	7.00	7	0	0	1	0	0	6	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTT...................................................................................................................................	25	1	7.00	7	1	0	0	0	1	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACG....................................................................................................................................	24	1	7.00	7	0	0	0	0	0	7	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAAT....................................................................................................................................	25	1	7.00	7	0	0	0	0	0	7	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAT.....................................................................................................................................	21	1	7.00	7	1	0	2	0	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	6.00	6	1	0	2	0	0	3	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTA...................................................................................................................................	25	1	6.00	6	1	0	1	0	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACAT...................................................................................................................................	25	1	6.00	6	0	0	0	0	0	6	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACTG...................................................................................................................................	25	1	6.00	6	0	0	2	0	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGTG...................................................................................................................................	25	1	6.00	6	0	0	1	0	0	5	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATA......................................................................................................................................	20	1	6.00	6	0	0	2	0	0	4	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	24	1	6.00	6	0	0	1	0	0	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCCA....................................................................................................................................	24	1	6.00	6	0	0	0	0	1	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGGA....................................................................................................................................	24	1	6.00	6	0	0	3	0	0	3	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	5.00	5	2	1	0	0	1	1	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAA.....................................................................................................................................	21	1	5.00	5	0	0	1	0	1	3	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAGT....................................................................................................................................	22	1	5.00	5	0	0	0	0	0	5	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT.....................................................................................................................................	22	1	5.00	5	5	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATA...................................................................................................................................	25	1	5.00	5	0	0	0	0	1	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTG....................................................................................................................................	24	1	5.00	5	0	0	0	0	0	5	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAA.................................................................................................................................................................................................	25	1	5.00	5	0	0	1	0	3	1	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTT..................................................................................................................................................................................................	24	1	5.00	5	0	0	0	1	2	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATG...................................................................................................................................	25	1	5.00	5	0	0	0	0	1	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAATGT..................................................................................................................................	26	1	5.00	5	0	0	0	0	1	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTA....................................................................................................................................	24	1	5.00	5	0	0	2	0	0	3	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGAT...................................................................................................................................	25	1	5.00	5	0	0	1	0	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAAGA...................................................................................................................................	25	1	5.00	5	0	0	0	0	0	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAGT.....................................................................................................................................	23	1	5.00	5	0	0	0	0	1	4	0

dp5

AACAAAC-AAACTAATGCTGCCCAACCCAATCATATGAA---CCG--A------TCACCCCAAAAAGTGAGCAGA-------------------CATC-G-----CGACATGGCATCTGTTGCAGCTAGCGGGTGTTTTATCTGGTAGCTGTAC-CC-TTTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGCCC------AAACCATCCA---------------------------------------------------------------------AGATTCAATAATTA-------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	38278.00	38278	81	18408	2349	5681	1053	4604	5278	146	322	356
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	4163.00	4163	13	2085	227	650	67	326	647	49	64	35
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	2968.00	2968	33	1490	84	446	58	265	541	12	30	9
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	1955.00	1955	3	225	570	1038	5	24	66	7	10	7
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	1653.00	1653	0	1612	5	20	1	8	6	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	670.00	670	23	412	11	73	7	113	20	2	6	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	586.00	586	2	380	20	35	8	34	84	7	11	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	472.00	472	0	199	36	126	17	42	36	5	5	6
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	408.00	408	0	160	42	99	13	47	39	1	2	5
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTA..................................................................................................................................................................................................	24	1	196.00	196	0	47	21	12	28	69	16	0	0	3
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	188.00	188	0	182	1	3	0	1	1	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	163.00	163	0	59	1	13	8	36	31	0	14	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	135.00	135	0	130	0	2	1	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	125.00	125	0	20	31	54	4	4	8	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	102.00	102	0	80	1	0	0	0	12	4	4	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	56.00	56	1	17	5	12	1	10	9	0	0	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	54.00	54	0	27	0	6	0	13	8	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	53.00	53	0	20	1	9	0	7	10	2	0	4
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	52.00	52	1	23	0	11	0	7	10	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	46.00	46	0	20	2	3	3	6	11	0	1	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT.....................................................................................................................................	22	1	41.00	41	0	40	0	0	0	0	1	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	40.00	40	0	39	0	0	0	0	0	1	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	35.00	35	1	15	5	13	1	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGG....................................................................................................................................................................................................	22	1	32.00	32	1	18	2	1	1	3	3	0	1	2
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	30.00	30	0	0	12	18	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	29.00	29	0	24	0	0	1	1	1	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	27.00	27	0	2	3	8	3	10	1	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGT...................................................................................................................................................................................................	23	1	25.00	25	0	4	4	0	7	6	1	0	0	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	23.00	23	0	21	1	0	0	1	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTG.....................................................................................................................................................................................................	21	1	22.00	22	0	12	0	0	5	1	4	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	21.00	21	0	12	0	0	0	4	2	0	3	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	21.00	21	0	20	0	1	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	20.00	20	1	1	0	18	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	19.00	19	0	18	1	0	0	0	0	0	0	0
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	15.00	15	0	14	0	0	1	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	14.00	14	0	8	0	0	0	1	2	0	3	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	12.00	12	0	2	2	4	0	0	3	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACA......................................................................................................................................	22	1	12.00	12	0	7	3	0	1	1	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCT......................................................................................................................................................................................................	20	1	11.00	11	0	5	1	0	0	1	4	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	10.00	10	0	0	0	1	2	7	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	10.00	10	0	4	1	1	0	1	2	1	0	0
...................................................................................................................................................GCTGTAC-CC-TTTT-G---AATCTA........................................................................................................................................................................	20	1	10.00	10	0	4	3	1	2	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	9.00	9	0	5	0	3	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAA......................................................................................................................................	22	1	9.00	9	0	7	0	1	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	8.00	8	0	7	0	1	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	8.00	8	0	3	0	1	1	1	2	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAC.......................................................................................................................................	19	1	8.00	8	0	0	2	5	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	8.00	8	0	2	0	5	0	1	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTTT....................................................................................................................................	23	1	7.00	7	0	7	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTC.......................................................................................................................................	21	1	7.00	7	0	0	0	6	0	1	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATC......................................................................................................................................	21	1	6.00	6	0	6	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATC.......................................................................................................................................................................................................	19	1	5.00	5	1	2	1	0	0	0	1	0	0	0
.............................................................................................................................CTAGCGGGTGTTTTATCTGGTAGCT...............................................................................................................................................................................................	25	1	5.00	5	0	3	2	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	5.00	5	0	4	0	0	0	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	4.00	4	0	1	0	1	0	0	1	1	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGC..........................................................................................................................................	21	1	4.00	4	0	0	1	1	1	0	0	0	0	1
................................................................................................................................................................................TAAGACACACGC------------GGCTATT......................................................................................................................................	19	1	4.00	4	0	3	1	0	0	0	0	0	0	0
.................................................................................................................................................................................AAGACACACGC------------GGCTATT......................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	4.00	4	0	0	0	0	1	2	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT.....................................................................................................................................	23	1	4.00	4	0	1	0	0	0	2	0	1	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	4.00	4	0	2	0	0	0	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAGA....................................................................................................................................	24	1	4.00	4	0	1	0	0	0	0	1	2	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTT..................................................................................................................................................................................................	24	1	3.00	3	0	1	0	0	2	0	0	0	0	0
............................................................................................................................GCTAGCGGGTGTTTTATCTGGTA..................................................................................................................................................................................................	23	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAA.......................................................................................................................................	20	1	3.00	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGC..........................................................................................................................................	19	1	3.00	3	0	2	0	0	0	0	1	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	3.00	3	0	1	0	2	0	0	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCC.........................................................................................................................................	22	1	3.00	3	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGC.......................................................................................................................................	21	1	3.00	3	0	0	3	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTG.......................................................................................................................................	21	1	3.00	3	0	0	0	0	2	1	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATTT.....................................................................................................................................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTAA.................................................................................................................................................................................................	25	1	3.00	3	0	1	1	0	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTA....................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GG...........................................................................................................................................	20	1	2.00	2	0	0	0	0	0	1	1	0	0	0
...................................................................................................................................................GCTGTAC-CC-TTTT-G---AATCTATCATAA..................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCTT........................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGG.......................................................................................................................................	21	1	2.00	2	0	1	0	0	0	1	0	0	0	0
.............................................................................................................................CTAGCGGGTGTTTTATCTGGT...................................................................................................................................................................................................	21	1	2.00	2	0	1	0	0	0	0	0	0	1	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAA.......................................................................................................................................	19	1	2.00	2	0	0	0	0	1	0	1	0	0	0
............................................................................................................................GCTAGCGGGTGTTTTATCTG.....................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................TAGCGGGTGTTTTATCTGG....................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCG.........................................................................................................................................	19	1	2.00	2	0	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAG.......................................................................................................................................	22	1	2.00	2	0	0	0	0	0	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATACA....................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTAG.................................................................................................................................................................................................	25	1	2.00	2	0	1	0	0	1	0	0	0	0	0

droPer2

TACAAAC-AAACTAATGCTGCCCAACCCAATCATATGAA---CCG--A------TCACCCCAAAAAGTGAGCAGA-------------------CATC-G-----CGACATGGCATCTGTTGCAGCTAGCGGGTGTTTTATCTGGTAGCTGTAC-CC-TTTT-G---AATCTATCATAAGACACACGC------------GGCTATGACCGATGCCC------AAACCATCCA---------------------------------------------------------------------AGATTCAATAATTA-------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	18308.00	18308	436	3915	334	3462	8976	1185
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	1521.00	1521	253	247	15	224	655	127
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	1010.00	1010	21	289	13	206	380	101
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	501.00	501	59	64	0	97	270	11
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	297.00	297	0	286	0	6	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	231.00	231	38	52	6	27	101	7
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	206.00	206	4	30	3	52	104	13
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	194.00	194	29	52	12	32	61	8
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTA..................................................................................................................................................................................................	24	1	154.00	154	5	8	2	52	81	6
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	101.00	101	0	38	1	12	31	19
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	95.00	95	0	12	2	28	51	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	61.00	61	4	0	1	9	47	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	60.00	60	12	5	1	16	23	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	52.00	52	2	1	0	12	37	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	51.00	51	0	9	1	12	27	2
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	44.00	44	3	4	0	8	24	5
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	43.00	43	9	2	2	6	23	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	30.00	30	0	28	0	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	29.00	29	4	12	0	3	10	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	23.00	23	0	21	0	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	20.00	20	0	10	0	2	7	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	17.00	17	1	2	0	2	12	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	16.00	16	0	6	0	5	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTCC.......................................................................................................................................	21	1	15.00	15	0	0	0	3	12	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	14.00	14	1	4	0	3	6	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGG....................................................................................................................................................................................................	22	1	13.00	13	3	1	0	1	8	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGT...................................................................................................................................................................................................	23	1	13.00	13	0	1	0	10	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTG.......................................................................................................................................	21	1	12.00	12	0	0	0	2	10	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	10.00	10	0	0	0	4	6	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	10.00	10	0	0	0	0	9	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACA......................................................................................................................................	22	1	8.00	8	0	4	2	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	7.00	7	2	0	0	1	4	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	7.00	7	0	6	0	0	1	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	7.00	7	0	6	0	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAA......................................................................................................................................	22	1	7.00	7	0	1	0	2	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	7.00	7	0	2	1	1	3	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT.....................................................................................................................................	22	1	6.00	6	0	6	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	6.00	6	0	0	0	1	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	6.00	6	2	0	0	0	4	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	6.00	6	0	1	0	1	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGG.......................................................................................................................................	21	1	5.00	5	0	0	0	0	5	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCG.........................................................................................................................................	19	1	5.00	5	1	0	0	0	4	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTAA.................................................................................................................................................................................................	25	1	5.00	5	0	1	0	2	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	5.00	5	0	0	0	1	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGT..........................................................................................................................................	18	1	5.00	5	0	0	0	0	5	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	4.00	4	0	4	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG.....................................................................................................................................	23	1	4.00	4	0	4	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	4.00	4	0	2	0	0	2	0
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	4.00	4	0	2	0	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGCT......................................................................................................................................	22	1	4.00	4	0	0	0	0	4	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	4.00	4	0	0	0	1	1	2
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	3.00	3	1	0	0	2	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTG.....................................................................................................................................................................................................	21	1	3.00	3	1	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGC.......................................................................................................................................	21	1	3.00	3	0	0	0	0	3	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTC..................................................................................................................................................................................................	24	1	3.00	3	0	0	1	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTGT......................................................................................................................................	22	1	3.00	3	0	0	0	1	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	3.00	3	0	0	0	0	3	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG.....................................................................................................................................	23	1	3.00	3	0	1	0	0	2	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	3.00	3	0	1	0	1	1	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTT..................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0
...........................................................................................................................AGCTAGCGGGTGTTTTATCTGGTG..................................................................................................................................................................................................	24	1	2.00	2	0	0	0	1	1	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTTT....................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTC.......................................................................................................................................	21	1	2.00	2	0	0	0	1	1	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAA.......................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTA.......................................................................................................................................	21	1	2.00	2	0	0	0	0	2	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	2.00	2	0	0	0	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCTT....................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0

droWil2

TCTA-----------------------------------CTAT--CCAT------TTTTCTATATAGAGTGTACAA------------------TCGT-A-----TT-CAGGGCATTTGTTGCAGCTAGCGGGTGTTTTATTTGGTAGCTGCAC-TAAAATTTCAATAATCTATCATAAGACACACGC------------GGCTATGACCGATGTCT------TTCTTAGCCA---------------------------------------------------------------------A-------CAATAATAATAAA---AA-----------AA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	41690.00	41690	13561	8776	943	4105	14305
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	8483.00	8483	6936	644	100	253	550
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	2750.00	2750	879	661	95	316	799
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	2599.00	2599	1903	338	21	54	283
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	1470.00	1470	1102	182	23	48	115
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	1374.00	1374	933	180	12	99	150
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	760.00	760	4	731	1	3	21
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	596.00	596	17	17	10	337	215
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	346.00	346	129	31	2	49	135
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	270.00	270	252	2	1	7	8
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	256.00	256	254	1	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	245.00	245	126	69	3	1	46
.................................................................................................T-A-----TT-CAGGGCATTTGTTGC..........................................................................................................................................................................................................................	19	1	241.00	241	7	4	0	51	179
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	207.00	207	7	24	5	40	131
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	205.00	205	167	4	2	0	32
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT.....................................................................................................................................	23	1	198.00	198	42	58	4	12	82
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	181.00	181	166	9	2	1	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	118.00	118	113	2	0	1	2
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGG....................................................................................................................................................................................................	22	1	83.00	83	21	1	3	15	43
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	81.00	81	44	9	1	8	19
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGT...................................................................................................................................................................................................	23	1	71.00	71	0	4	2	40	25
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	60.00	60	2	56	0	1	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCG.........................................................................................................................................	19	1	59.00	59	58	0	0	0	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	55.00	55	0	53	0	0	2
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	45.00	45	0	2	2	10	31
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	45.00	45	25	11	0	2	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC.....................................................................................................................................	23	1	35.00	35	7	15	1	0	12
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACA......................................................................................................................................	22	1	31.00	31	10	7	1	10	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	31.00	31	7	11	0	5	8
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	25.00	25	23	2	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	23.00	23	1	22	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCC.........................................................................................................................................	20	1	23.00	23	23	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	2	22.00	44	27	8	2	0	7
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	1	21.00	21	17	1	1	0	2
................................................................................................GT-A-----TT-CAGGGCATTTGTTGC..........................................................................................................................................................................................................................	20	1	17.00	17	0	0	0	5	12
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAC.......................................................................................................................................	20	1	17.00	17	0	17	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTG.....................................................................................................................................................................................................	21	1	14.00	14	1	3	0	2	8
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	14.00	14	0	9	0	0	5
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	14.00	14	0	3	1	3	7
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	12.00	12	1	2	0	4	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	11.00	11	2	3	0	1	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT.....................................................................................................................................	23	1	10.00	10	2	2	0	0	6
............................................................................................................................................................................ATCATAAGACACACGC------------GGC..........................................................................................................................................	19	1	9.00	9	7	0	0	0	2
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	8.00	8	7	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTTT....................................................................................................................................	24	1	8.00	8	0	2	0	1	5
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT.....................................................................................................................................	23	1	7.00	7	1	1	0	0	5
...........................................................................................................................................................................TATCATAAGACACACGC------------GGCT.........................................................................................................................................	21	1	6.00	6	3	3	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	6.00	6	0	6	0	0	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GGCT.........................................................................................................................................	22	1	5.00	5	2	0	0	0	3
.............................................................................................................................CTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	22	1	5.00	5	0	0	1	4	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATA......................................................................................................................................	20	1	4.00	4	0	2	1	0	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	4.00	4	3	0	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC.....................................................................................................................................	23	1	4.00	4	4	0	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAA.................................................................................................................................................................................................	25	1	4.00	4	0	1	0	2	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGAC.........................................................................................................................................	19	1	3.00	3	3	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTT........................................................................................................................................	21	1	3.00	3	1	1	0	0	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATC......................................................................................................................................	21	1	3.00	3	0	3	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	3.00	3	3	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGT..........................................................................................................................................	18	1	3.00	3	0	0	0	0	3
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAGC................................................................................................................................................................................................	26	1	3.00	3	0	2	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGA.....................................................................................................................................	23	1	2.00	2	0	0	0	1	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAA......................................................................................................................................	22	1	2.00	2	0	0	0	1	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAC.....................................................................................................................................	22	1	2.00	2	0	2	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATATT....................................................................................................................................	24	1	2.00	2	1	1	0	0	0
.................................................................................................T-A-----TT-CAGGGCATTTGTTGG..........................................................................................................................................................................................................................	19	1	2.00	2	1	0	0	0	1
...................................................................................................A-----TT-CAGGGCATTTGTTGC..........................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	2	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTG..................................................................................................................................................................................................	24	1	2.00	2	0	0	1	0	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCG.........................................................................................................................................	20	1	2.00	2	2	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAG.......................................................................................................................................	20	1	2.00	2	1	1	0	0	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAAA................................................................................................................................................................................................	26	1	2.00	2	0	0	0	2	0
................................................................................................................................................................................TAAGACACACGC------------GGCTATT......................................................................................................................................	19	1	2.00	2	0	2	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTC........................................................................................................................................	21	1	2.00	2	1	0	0	0	1
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT.....................................................................................................................................	22	1	2.00	2	0	2	0	0	0
..............................................................................................................................TAGCGGGTGTTTTATTTGGTAGCT...............................................................................................................................................................................................	24	1	2.00	2	0	0	0	1	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACTT.....................................................................................................................................	23	1	2.00	2	0	1	0	0	1
...............................................................................................CGT-A-----TT-CAGGGCATTTGTTGC..........................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	1	0
...........................................................................................................................AGCTAGCGGGTGTTTTATTTGGTAGA................................................................................................................................................................................................	26	1	2.00	2	0	0	0	1	1
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATTT.....................................................................................................................................	21	1	2.00	2	0	0	0	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTGG.......................................................................................................................................	21	2	1.50	3	3	0	0	0	0
............................................................................................................................GCTAGCGGGTGTTTTATTTGGTA..................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0

droVir3

ATAC-AT-TG-------------------------------------AT-TTACT--G---------T----------------GAATA-CTATATAG-A-----ACAACTGACGTCTGTTGTAGCCAGCGGATGTTTTATTTGGTAGTTGCGC-TT-TATT-A---AATCTATCATAAGACACACGC------------GGCTATAA-------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT.......................................................................................................................................	21	1	104018.00	104018	770	3208	12243	1274	676	473	822	198	103	244	72	97	359	64	868	745	323	914	748	261	2143	439	2673	1550	1930	1891	2442	2873	3056	4453	2497	5496	878	2050	970	1037	1458	1057	1226	1752	3	4	9	2	3	8	5	6	16	11	23	31	18	27	22	34	41	64	130	738	3373	9778	94	73	543	374	354	164	3291	5536	2010	1916	4079	3726	144	214	208	288	325
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	8131.00	8131	426	2247	638	52	24	25	27	40	5	50	0	11	23	4	9	19	7	15	13	2	135	6	85	56	52	46	63	70	134	219	122	254	33	97	46	38	81	57	37	74	1	2	1	1	0	3	2	0	2	0	1	3	1	2	2	8	5	15	12	21	211	701	0	4	16	24	29	13	323	394	181	205	293	238	10	6	13	19	27
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATT......................................................................................................................................	22	1	7021.00	7021	66	338	913	140	66	15	42	30	6	19	10	14	36	9	16	10	5	12	11	4	108	8	182	132	155	134	198	188	159	231	112	272	39	88	41	49	52	53	80	88	0	2	1	0	0	0	0	0	0	3	2	4	3	5	3	9	8	27	17	54	345	705	0	37	62	32	26	21	287	278	205	164	298	200	17	16	16	21	22
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT.......................................................................................................................................	22	1	3363.00	3363	35	186	328	47	28	23	29	6	5	7	1	0	14	3	24	22	7	20	26	9	55	9	117	45	75	68	128	97	124	175	58	122	9	39	22	25	27	39	27	47	0	0	1	0	0	0	1	0	1	2	1	2	0	0	1	2	1	6	7	21	155	277	2	22	35	7	5	7	118	169	76	60	116	123	2	4	3	5	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATA......................................................................................................................................	22	1	2568.00	2568	31	201	120	24	5	3	8	1	4	1	0	11	36	4	0	4	0	2	0	0	4	0	13	19	45	28	46	55	19	15	10	14	33	5	66	48	88	71	22	10	1	1	2	4	0	1	0	0	2	2	2	0	1	1	0	0	1	3	0	8	35	73	0	9	11	56	43	22	241	272	86	137	162	158	26	23	29	38	52
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	1919.00	1919	81	894	198	4	2	7	9	6	1	7	0	1	3	1	11	11	4	5	2	1	34	1	23	15	8	12	5	6	24	47	25	41	6	23	13	2	21	4	12	14	0	2	3	1	4	1	2	0	3	0	3	0	1	1	0	7	4	29	5	6	119	45	0	1	0	14	11	8	3	6	3	1	1	0	8	3	10	17	13
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTT-------------------------------------------------------------------------------------------------------------------------------------	23	1	1493.00	1493	4	60	253	11	8	3	6	2	0	2	1	0	6	0	33	35	11	25	16	7	8	16	166	7	15	8	26	9	33	58	19	54	11	17	9	5	9	10	9	12	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	2	0	1	3	209	176	0	8	13	5	1	4	6	28	10	9	14	7	1	0	2	5	3
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT.......................................................................................................................................	20	1	1125.00	1125	1	0	1046	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	5	2	6	5	4	9	3	11	0	1	3	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	13	0	0	1	0	0	0	1	2	0	1	0	2	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATC......................................................................................................................................	22	1	1063.00	1063	62	88	128	13	1	10	4	0	0	6	0	1	1	1	0	3	1	1	0	0	38	0	6	10	6	5	5	4	49	43	29	68	0	25	0	0	1	3	6	31	1	2	3	0	1	1	1	0	0	2	3	0	0	0	2	2	2	3	1	3	19	76	0	0	1	3	2	1	39	46	37	51	57	47	1	0	3	3	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAC.......................................................................................................................................	21	1	849.00	849	54	281	29	255	0	3	2	0	0	2	0	1	0	1	1	4	3	2	0	0	24	3	3	5	4	2	5	6	4	11	3	8	3	5	1	2	2	3	2	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	27	15	0	0	0	1	2	0	11	19	2	8	8	5	0	1	4	0	3
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	658.00	658	40	281	24	3	3	1	0	0	0	4	0	0	2	1	4	2	1	2	0	2	6	3	7	2	5	5	8	4	17	14	5	6	0	1	1	1	3	4	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	21	24	0	2	0	1	1	0	19	32	13	17	22	28	1	3	1	2	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAA-------------------------------------------------------------------------------------------------------------------------------------	23	1	614.00	614	0	1	34	2	2	0	0	0	0	0	0	2	22	4	0	0	0	0	0	0	0	0	2	7	38	13	23	17	5	1	3	8	30	1	28	23	110	46	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	10	0	11	2	26	17	5	5	9	6	6	8	4	6	14	12	14	20
...........................................................................................................................AGCCAGCGGATGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	513.00	513	10	15	30	8	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	6	1	2	3	9	13	9	1	4	5	0	1	0	0	0	0	4	1	0	0	0	0	0	1	2	1	2	1	3	2	3	1	1	0	1	2	25	3	15	7	0	12	10	0	0	0	72	59	29	41	45	44	0	0	0	1	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT.......................................................................................................................................	19	1	507.00	507	1	1	75	1	2	4	3	2	0	2	0	1	4	0	2	3	0	2	1	0	14	1	9	5	19	11	13	17	25	31	12	29	3	19	5	13	10	3	8	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	8	28	87	0	0	4	0	1	0	5	6	3	0	2	1	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	362.00	362	12	192	21	2	0	1	0	1	0	0	0	0	1	0	2	0	2	0	0	0	4	0	5	2	1	0	2	0	2	5	2	4	1	1	0	2	0	1	0	2	0	1	0	0	0	0	1	1	0	1	1	0	0	0	0	2	0	7	1	0	32	22	0	0	0	5	4	1	0	0	0	0	3	0	0	3	3	3	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	350.00	350	15	63	15	2	1	0	5	0	0	0	1	0	1	0	10	5	3	5	8	13	7	14	10	2	2	2	4	3	5	7	5	15	3	5	1	1	1	2	2	1	0	1	0	0	0	0	0	0	0	0	2	0	1	0	0	2	3	1	0	0	2	2	0	0	0	1	0	2	11	21	5	16	17	21	2	0	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTC-------------------------------------------------------------------------------------------------------------------------------------	23	1	254.00	254	7	12	27	3	1	3	0	0	0	3	1	1	0	0	0	0	0	0	0	0	14	0	5	4	2	1	3	2	25	21	11	26	1	8	0	0	0	0	2	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	7	21	0	1	0	1	1	1	3	4	3	1	8	4	0	0	1	1	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA.......................................................................................................................................	21	1	221.00	221	1	46	12	1	0	0	1	0	1	1	0	0	2	0	3	3	0	2	5	1	5	2	3	2	3	5	3	3	4	9	4	10	5	1	6	2	10	4	4	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	22	0	0	1	3	4	0	1	5	2	2	4	2	0	1	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCC-------------------------------------------------------------------------------------------------------------------------------------	23	1	221.00	221	31	3	26	0	3	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	11	0	3	2	0	0	1	0	15	16	9	16	0	16	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	11	0	0	0	0	0	0	3	9	6	7	10	8	0	0	1	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	159.00	159	16	143	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATT......................................................................................................................................	21	1	104.00	104	0	0	98	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAT-------------------------------------------------------------------------------------------------------------------------------------	23	1	96.00	96	1	5	12	1	0	0	0	0	0	0	0	0	1	0	1	1	1	0	1	0	0	0	6	2	3	0	1	1	2	0	1	1	3	0	3	2	12	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	10	8	0	1	0	0	1	0	0	2	0	0	2	0	0	0	0	1	3
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATCT-------------------------------------------------------------------------------------------------------------------------------------	23	1	91.00	91	5	5	11	0	0	5	0	0	0	0	0	0	0	0	0	2	0	0	0	0	6	0	1	2	1	2	0	0	6	9	4	7	0	3	1	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	2	0	1	1	1	0	0	1	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG.......................................................................................................................................	21	1	86.00	86	13	32	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	6	0	0	2	1	0	0	0	0	0	0	1	0	2	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	10	4	0	0	0	0	1	0	0	1	0	1	1	1	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATT......................................................................................................................................	23	1	82.00	82	0	12	13	1	0	0	0	0	0	0	0	0	1	0	0	1	1	0	1	0	1	0	6	0	1	1	2	0	1	4	1	1	0	1	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	4	0	0	2	1	0	0	6	2	4	1	2	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATTTG.....................................................................................................................................................................................................	21	1	76.00	76	2	10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	13	3	5	12	10	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATTG-------------------------------------------------------------------------------------------------------------------------------------	23	1	71.00	71	1	28	6	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	7	0	0	0	1	0	0	0	3	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	71.00	71	2	19	8	0	0	2	1	0	0	0	0	1	0	0	0	1	0	0	0	1	2	0	2	0	1	0	0	1	1	1	4	2	0	3	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	13	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATG......................................................................................................................................	22	1	66.00	66	2	6	20	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	2	1	2	1	0	0	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	2	0	1	0	3	1	0	1	2	1	0	0	1	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	65.00	65	0	1	61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATA......................................................................................................................................	23	1	53.00	53	1	4	4	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	2	1	1	1	0	1	0	0	1	0	1	6	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	2	0	3	1	1	4	2	5	0	0	0	1	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCG.........................................................................................................................................	19	1	46.00	46	5	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TAAGACACACGC------------GGCTAT.......................................................................................................................................	18	1	44.00	44	0	0	20	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	1	1	1	0	2	6	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
.........................................................................................................ACAACTGACGTCTGTTGT..........................................................................................................................................................................................................................	18	1	38.00	38	2	2	0	0	0	0	4	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	4	2	2	5	2	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTG........................................................................................................................................	20	1	35.00	35	4	24	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATTTGGT...................................................................................................................................................................................................	23	1	34.00	34	0	0	3	4	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	5	1	0	2	0	0	0	0	1	0	0	1	4	2	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATT......................................................................................................................................	20	1	34.00	34	0	0	6	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	2	1	2	1	0	4	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	5	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCC.........................................................................................................................................	20	1	33.00	33	2	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAG-------------------------------------------------------------------------------------------------------------------------------------	23	1	32.00	32	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	3	0	0	0	0	0	0	0	0	2	5	5	6
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTC........................................................................................................................................	20	2	31.00	62	5	20	0	0	0	1	2	2	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	4	0	0	0	0	0	1	0	0	0	5	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	2	0	0	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGT-------------------------------------------------------------------------------------------------------------------------------------	23	1	31.00	31	0	4	7	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATTTGG....................................................................................................................................................................................................	22	1	31.00	31	0	1	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	2	3	6	3	2	1	0	0	0	2	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAC.......................................................................................................................................	22	1	30.00	30	1	18	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATTT......................................................................................................................................................................................................	20	1	29.00	29	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	1	5	2	5	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	29.00	29	0	2	4	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	2	0	0	2	0	0	0	2	2	1	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAA-------------------------------------------------------------------------------------------------------------------------------------	24	1	25.00	25	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	1	0	1	0	1	0	8	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	1	0	0
...................................................................................................A-----ACAACTGACGTCTGTTGT..........................................................................................................................................................................................................................	19	1	25.00	25	0	1	1	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	0	3	1	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	24.00	24	0	0	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATTT-------------------------------------------------------------------------------------------------------------------------------------	22	1	23.00	23	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACT......................................................................................................................................	22	1	22.00	22	0	2	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	0	0	0	0	0	0	0	1	0	1	1	3	0	0	1	0	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATC......................................................................................................................................	23	1	22.00	22	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	4	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCG.........................................................................................................................................	20	1	19.00	19	2	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATTT-------------------------------------------------------------------------------------------------------------------------------------	24	1	18.00	18	0	2	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGC..........................................................................................................................................	19	1	18.00	18	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	1	2	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTT........................................................................................................................................	21	1	15.00	15	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATA......................................................................................................................................	21	1	15.00	15	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATTTGGTAG.................................................................................................................................................................................................	25	1	15.00	15	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATT.......................................................................................................................................................................................................	19	1	14.00	14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	1	0	2	3	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATC......................................................................................................................................	21	1	13.00	13	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................GTTGCGC-TT-TATT-A---AATCTA........................................................................................................................................................................	20	1	13.00	13	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAA.......................................................................................................................................	22	1	11.00	11	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	1	0	1	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATAC-------------------------------------------------------------------------------------------------------------------------------------	23	1	11.00	11	3	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTAT........................................................................................................................................................................................................	18	1	11.00	11	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTA.......................................................................................................................................	21	1	10.00	10	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GG...........................................................................................................................................	17	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTCC.......................................................................................................................................	21	2	8.00	16	1	3	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTTG.......................................................................................................................................	21	1	7.00	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATCC-------------------------------------------------------------------------------------------------------------------------------------	24	1	7.00	7	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCA.........................................................................................................................................	19	1	6.00	6	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACC......................................................................................................................................	22	1	6.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
............................................................................................................................................................................ATCATAAGACACACGC------------GG...........................................................................................................................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATA......................................................................................................................................	20	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATG......................................................................................................................................	23	1	6.00	6	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0
.............................................................................................................................CCAGCGGATGTTTTATTTGGTA..................................................................................................................................................................................................	22	1	5.00	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................GTTGCGC-TT-TATT-A---AATCT.........................................................................................................................................................................	19	1	5.00	5	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TAAGACACACGC------------GGCTATT......................................................................................................................................	19	1	5.00	5	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATTT-------------------------------------------------------------------------------------------------------------------------------------	21	2	4.50	9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCT.........................................................................................................................................	17	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTACTT-------------------------------------------------------------------------------------------------------------------------------------	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................AGCGGATGTTTTATTTGGTA..................................................................................................................................................................................................	20	1	4.00	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAG.......................................................................................................................................	22	1	4.00	4	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTG........................................................................................................................................	21	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TAG-A-----ACAACTGACGTCTGTTGT..........................................................................................................................................................................................................................	22	1	4.00	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGT..........................................................................................................................................	18	1	4.00	4	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAAT......................................................................................................................................	22	2	3.50	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATTTGGTC..................................................................................................................................................................................................	24	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTATAT-------------------------------------------------------------------------------------------------------------------------------------	24	1	3.00	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTATAA-------------------------------------------------------------------------------------------------------------------------------------	21	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTC........................................................................................................................................	21	1	3.00	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATAA-------------------------------------------------------------------------------------------------------------------------------------	22	1	3.00	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTATGG-------------------------------------------------------------------------------------------------------------------------------------	23	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAGT......................................................................................................................................	22	1	3.00	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCTATCC-------------------------------------------------------------------------------------------------------------------------------------	22	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAC.......................................................................................................................................	19	1	3.00	3	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................AGCCAGCGGATGTTTTATC.......................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.................................................................................................................................................................................AAGACACACGC------------GGCTATT......................................................................................................................................	18	1	3.00	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0

droMoj3

TGAAACTG-G-------------------------------------AT-GAAA---A---------T----------------AATGA-TTG-CATT-G-----TGTA----TATGT-------GTTATGTATGTTATATTTGTATATTAT-C-TA-CTTT-T---AA--TATCAAAAGACAAAGGGTATCCAAGAGGAAGCTATGTAAGATAAAT--GATATTAAATATCAA--------------------------------------------------------------------T--GATAAAGATTACAAAACA---GAAAG---T------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

TACA-----------------------------------ACTT--AAAGCTAGCT--AT--------CCAGT------------AGAAA-GTCTGCCCAA-----AAAATTGACGTCTGTTGTAGCCTGCGTATGTTTTATTTGGTAGTTGTAACTAAAATC-G---AATCTATCATAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------	21	1	3992.00	3992	2543	1449
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTA........................................................................................................................................	20	1	263.00	263	137	126
..............................................................................................................................................................................CATAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------	20	1	249.00	249	248	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCT.........................................................................................................................................	20	1	245.00	245	110	135
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------	22	1	139.00	139	91	48
.............................................................................................................................................................................TCATAAGACACACGC------------GGCT.........................................................................................................................................	19	1	104.00	104	81	23
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTA........................................................................................................................................	21	1	64.00	64	30	34
..............................................................................................................................................................................CATAAGACACACGC------------GGCTA........................................................................................................................................	19	1	17.00	17	16	1
...............................................................................................................................................................................ATAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------	19	1	16.00	16	8	8
.............................................................................................................................................................................TCATAAGACACACGC------------GGC..........................................................................................................................................	18	1	8.00	8	8	0
..............................................................................................................................................................................CATAAGACACACGC------------GGCT.........................................................................................................................................	18	1	6.00	6	6	0
...........................................................................................................................AGCCTGCGTATGTTTTATTTGGTA..................................................................................................................................................................................................	24	1	6.00	6	5	1
............................................................................................................................................................................ATCATAAGACACACGC------------GGCTT........................................................................................................................................	21	1	5.00	5	3	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTT........................................................................................................................................	20	1	4.00	4	1	3
................................................................................................................................................................................TAAGACACACGC------------GGCTAT---------------------------------------------------------------------------------------------------------------------------------------	18	1	4.00	4	3	1
...........................................................................................................................AGCCTGCGTATGTTTTATTTGGT...................................................................................................................................................................................................	23	1	3.00	3	1	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAG---------------------------------------------------------------------------------------------------------------------------------------	21	1	2.00	2	0	2
............................................................................................................................................................................ATCATAAGACACACGC------------GGC..........................................................................................................................................	19	1	2.00	2	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCTAA---------------------------------------------------------------------------------------------------------------------------------------	21	1	2.00	2	0	2
.............................................................................................................................................................................TCATAAGACACACGC------------GGCC.........................................................................................................................................	19	1	1.00	1	0	1
............................................................................................................................GCCTGCGTATGTTTTATTTGGT...................................................................................................................................................................................................	22	1	1.00	1	1	0
.............................................................................................................................................................................TCATAAGACACACGC------------GGCA.........................................................................................................................................	19	1	1.00	1	0	1
...............................................................................................................................................................................ATAAGACACACGC------------GGCTA........................................................................................................................................	18	1	1.00	1	0	1
...........................................................................................................................AGCCTGCGTATGTTTTATTTGG....................................................................................................................................................................................................	22	1	1.00	1	1	0
............................................................................................................................................................................ATCATAAGACACACGC------------GGCC.........................................................................................................................................	20	1	1.00	1	0	1
.............................................................................................................................CCTGCGTATGTTTTATTTGGTGT.................................................................................................................................................................................................	23	1	1.00	1	1	0
............................................................................................................................GCCTGCGTATGTTTTATTTGGTA..................................................................................................................................................................................................	23	1	1.00	1	1	0
..........................................................................................................................................................................CTATCATAAGACACACGC------------GG...........................................................................................................................................	20	1	1.00	1	1	0

dan_8

scaffold_13117:3438256-3438321 +

Known Ortholog

Canonical miRNA

intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-29.8	-29.6	-29.5