ID:

dan_79

 Coordinate:

scaffold_12916:9464639-9464699 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.6 -24.3 -24.2

Flybase annnotation

CDS [Dana\GF15499-cds]; exon [dana_GLEANR_16265:3]

No Repeatable elements found

Sense Strand Reads

#################################################################################################################################################################
TATACTTGTTCATCAGACTCCAGGGCTTTGCCGCCGTTATCCTTTATTGCGTGCTGAACGTGGCGGTGCATGTACTGATGTACACCTACTACTACCTGTCCTCGGTCAGCCAGGCGGTGCAGTCGAGTCTGTGGTGGAAGAAGTACATCACCATGGTCCAG
***************************************..((.((((((.((((((.((.((.((((..(((((....)))))........))))...)).)).)))).)).)))))).))...************************************ 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V106
head
......................................................................................TACTACTACCTGTCCTCGGTCAGC................................................... 24 0 1 182.00 182 68 33 81 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAGC................................................... 25 0 1 139.00 139 96 14 29 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCC.................................................. 25 0 1 106.00 106 29 76 1 0 0
.ATACTTGTTCATCAGACTCCAGGGC....................................................................................................................................... 25 0 1 81.00 81 22 38 21 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTCCAG 25 0 1 72.00 72 47 19 6 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCCA................................................. 26 0 1 66.00 66 61 5 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCCAGG............................................... 28 0 1 63.00 63 57 4 2 0 0
........TTCATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 27 0 1 52.00 52 7 45 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCCAG................................................ 27 0 1 46.00 46 43 2 1 0 0
.......................................TCCTTTATTGCGTGCTGAACGTGGCGG............................................................................................... 27 0 1 37.00 37 34 3 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAG.................................................... 23 0 1 36.00 36 32 4 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAG.................................................... 24 0 1 35.00 35 35 0 0 0 0
.ATACTTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 27 0 1 33.00 33 26 7 0 0 0
.ATACTTGTTCATCAGACTCCAGGGCT...................................................................................................................................... 26 0 1 27.00 27 14 12 0 1 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAGCCA................................................. 27 0 1 24.00 24 23 1 0 0 0
TATACTTGTTCATCAGACTCCAGGGC....................................................................................................................................... 26 0 1 23.00 23 11 7 5 0 0
.ATACTTGTTCATCAGACTCCAGGG........................................................................................................................................ 24 0 1 21.00 21 11 8 2 0 0
..TACTTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 26 0 1 20.00 20 14 6 0 0 0
......TGTTCATCAGACTCCAGGGCTTTGC.................................................................................................................................. 25 0 1 18.00 18 12 6 0 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTCC.. 23 0 1 17.00 17 4 13 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAGCCAG................................................ 28 0 1 16.00 16 16 0 0 0 0
TATACTTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 28 0 1 15.00 15 11 4 0 0 0
........TTCATCAGACTCCAGGGCTTTGCC................................................................................................................................. 24 0 1 15.00 15 2 13 0 0 0
.......................................TCCTTTATTGCGTGCTGAACGTGGC................................................................................................. 25 0 1 15.00 15 12 1 2 0 0
........TTCATCAGACTCCAGGGCTTTGCCGCCGT............................................................................................................................ 29 0 1 14.00 14 9 5 0 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTCCA. 24 0 1 13.00 13 10 3 0 0 0
................................................................................TACACCTACTACTACCTGTCCTCGGT....................................................... 26 0 1 13.00 13 10 3 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAGCC.................................................. 26 0 1 13.00 13 8 5 0 0 0
..TACTTGTTCATCAGACTCCAGGGCT...................................................................................................................................... 25 0 1 13.00 13 9 4 0 0 0
..TACTTGTTCATCAGACTCCAGGGC....................................................................................................................................... 24 0 1 13.00 13 10 0 3 0 0
........TTCATCAGACTCCAGGGCTTTGCCGCCG............................................................................................................................. 28 0 1 13.00 13 10 3 0 0 0
......TGTTCATCAGACTCCAGGGCTTTG................................................................................................................................... 24 0 1 11.00 11 11 0 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCA..................................................... 22 0 1 11.00 11 11 0 0 0 0
.......GTTCATCAGACTCCAGGGCTTTGC.................................................................................................................................. 24 0 1 10.00 10 4 5 1 0 0
.ATACTTGTTCATCAGACTCCAGGGCC...................................................................................................................................... 26 1 1 9.00 9 0 9 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCA..................................................... 23 0 1 9.00 9 9 0 0 0 0
........TTCATCAGACTCCAGGGCTTTGCCGC............................................................................................................................... 26 0 1 8.00 8 7 1 0 0 0
.........TCATCAGACTCCAGGGCTTTGCCGCCGT............................................................................................................................ 28 0 1 8.00 8 7 0 1 0 0
.....TTGTTCATCAGACTCCAGGGCTTTG................................................................................................................................... 25 0 1 8.00 8 8 0 0 0 0
.......................................TCCTTTATTGCGTGCTGAACGTGGCG................................................................................................ 26 0 1 8.00 8 8 0 0 0 0
................................................................................TACACCTACTACTACCTGTCCTCGGTCA..................................................... 28 0 1 8.00 8 7 1 0 0 0
..............................................................................................................CAGGCGGTGCAGTCGAGTCTGTGG........................... 24 0 1 7.00 7 3 4 0 0 0
........TTCATCAGACTCCAGGGCTTTGCCG................................................................................................................................ 25 0 1 7.00 7 5 2 0 0 0
.........TCATCAGACTCCAGGGCTTTGCCGCCG............................................................................................................................. 27 0 1 7.00 7 7 0 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAGCCAGG............................................... 29 0 1 7.00 7 7 0 0 0 0
.........................................................................................TACTACCTGTCCTCGGTCAGCCAGG............................................... 25 0 1 6.00 6 3 1 2 0 0
.......GTTCATCAGACTCCAGGGCTTTGCC................................................................................................................................. 25 0 1 6.00 6 1 5 0 0 0
......TGTTCATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 29 0 1 6.00 6 3 3 0 0 0
........TGCATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 27 1 1 6.00 6 0 6 0 0 0
........................................................................................CTACTACCTGTCCTCGGTCAGCCAGG............................................... 26 0 1 6.00 6 4 1 1 0 0
.......GTTCATCAGACTCCAGGGCTTTG................................................................................................................................... 23 0 1 5.00 5 5 0 0 0 0
................................................................................TACACCTACTACTACCTGTCCTCGG........................................................ 25 0 1 5.00 5 5 0 0 0 0
..........CATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 25 0 1 5.00 5 1 4 0 0 0
.....TTGTTCATCAGACTCCAGGGCTTT.................................................................................................................................... 24 0 1 4.00 4 2 2 0 0 0
.ATACTTGTTCATCAGACTCCAGG......................................................................................................................................... 23 0 1 4.00 4 1 2 1 0 0
TATACTTGTTCATCAGACTCCAGGG........................................................................................................................................ 25 0 1 4.00 4 4 0 0 0 0
........................................................................................................................................GGAGAAGTACATCACCATGGTCCAG 25 1 1 4.00 4 0 4 0 0 0
.......................................TCCTTTATTGCGTGCTGAACGTG................................................................................................... 23 0 1 4.00 4 4 0 0 0 0
.....................................TATCCTTTATTGCGTGCTGAACGTGGC................................................................................................. 27 0 1 4.00 4 4 0 0 0 0
......................................................................................TACTACTAGCTGTCCTCGGTCAGC................................................... 24 1 1 4.00 4 4 0 0 0 0
.......................................TCCTTTATTGCGTGCTGAACGTGG.................................................................................................. 24 0 1 4.00 4 4 0 0 0 0
.....................................TATCCTTTATTGCGTGCTGAACGTG................................................................................................... 25 0 1 4.00 4 3 1 0 0 0
........TTCATCAGACTCCAGGGCTTTGC.................................................................................................................................. 23 0 1 4.00 4 2 2 0 0 0
......................................................................................TACTACTAGCTGTCCTCGGTCAGCCAGG............................................... 28 1 1 4.00 4 4 0 0 0 0
......TGTTCATCAGACTCCAGGGCTTTGCC................................................................................................................................. 26 0 1 4.00 4 2 2 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTC...................................................... 22 0 1 4.00 4 4 0 0 0 0
TATACTTGTTCATCAGACTCCAGGGCT...................................................................................................................................... 27 0 1 4.00 4 2 2 0 0 0
....................................TTATCCTTTATTGCGTGCTGAACGTG................................................................................................... 26 0 1 4.00 4 2 1 1 0 0
.........TCATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 26 0 1 4.00 4 1 3 0 0 0
TATACTTGTTCATCAGACTCCAGG......................................................................................................................................... 24 0 1 4.00 4 3 0 1 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTC... 22 0 1 4.00 4 2 2 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCCAGGC.............................................. 29 0 1 4.00 4 4 0 0 0 0
......................................................TGAACGTGGCGGTGCATGTACTGATG................................................................................. 26 0 1 4.00 4 3 1 0 0 0
.....................................TATCCTTTATTGCGTGCTGAACGTGG.................................................................................................. 26 0 1 3.00 3 2 1 0 0 0
..TACTTGTTCATCAGACTCCAGG......................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0
.....................................TATCCTTTATTGCGTGCTGAACGTGGCGG............................................................................................... 29 0 1 3.00 3 3 0 0 0 0
....................................TTATCCTTTATTGCGTGCTGAACGTGG.................................................................................................. 27 0 1 3.00 3 2 1 0 0 0
..........................................................................................................CAGCCAGGCGGTGCAGTCGAGTCT............................... 24 0 1 3.00 3 2 1 0 0 0
..................................................................................CACCTACTACTACCTGTCCTCGGTCAGC................................................... 28 0 1 3.00 3 3 0 0 0 0
......................................................................................TGCTACTACCTGTCCTCGGTCAGCC.................................................. 25 1 1 3.00 3 0 3 0 0 0
........................................................................TACTGATGTACACCTACTACTACCTG............................................................... 26 0 1 3.00 3 3 0 0 0 0
....................................................................................CCTACTACTACCTGTCCTCGGTCAGC................................................... 26 0 1 3.00 3 2 1 0 0 0
.....................................................................................CTACTACTGCCTGTCCTCGGTCAGC................................................... 25 1 1 3.00 3 2 1 0 0 0
.....TTGTTCATCAGACTCCAGGGCTTTGCC................................................................................................................................. 27 0 1 3.00 3 1 2 0 0 0
................................................................................................TGTCCTCGGTCAGCCAGGCGGTGCA........................................ 25 0 1 3.00 3 3 0 0 0 0
......................................................................................................................................TGGAAGAAGTACATCACCATGGTCC.. 25 0 1 3.00 3 2 1 0 0 0
.....................................................................................CTACTACTCCCTGTCCTCGGTCAGC................................................... 25 1 1 3.00 3 2 1 0 0 0
.......................................................................................ACTACTACCTGTCCTCGGTCAGCCAGG............................................... 27 0 1 3.00 3 3 0 0 0 0
......................................................................................TAATACTACCTGTCCTCGGTCAGCC.................................................. 25 1 1 3.00 3 0 3 0 0 0
......................................................TGAACGTGGCGGTGCATGTACTGATGTA............................................................................... 28 0 1 3.00 3 3 0 0 0 0
........................................................................TACTGATGTACACCTACTACTACCTGTCC............................................................ 29 0 1 3.00 3 2 1 0 0 0
........................................CCTTTATTGCGTGCTGAACGTGGC................................................................................................. 24 0 1 3.00 3 3 0 0 0 0
..................TCCAGGGCTTTGCCGCCGTTATCC....................................................................................................................... 24 0 1 3.00 3 1 2 0 0 0
................................................................................TACACCTACTACTACCTGTCCTCGGTC...................................................... 27 0 1 3.00 3 0 3 0 0 0
..........................TTTGCCGCCGTTATCCTTTATTGC............................................................................................................... 24 0 1 3.00 3 0 3 0 0 0
.................................................................................ACACCTACTACTACCTGTCCTCGGTCA..................................................... 27 0 1 3.00 3 1 2 0 0 0
.......................................................................................ACTACTACCTGTCCTCGGTCAG.................................................... 22 0 1 3.00 3 3 0 0 0 0
............................................................TGGCGGTGCATGTACTGATGTACACC........................................................................... 26 0 1 3.00 3 1 2 0 0 0
................................GCCGTTATCCTTTATTGCGTGCTGAACG..................................................................................................... 28 0 1 3.00 3 3 0 0 0 0
.................................................................................ACACCTACTACTACCTGTCCTCGGTC...................................................... 26 0 1 3.00 3 0 3 0 0 0
.........................................................................................................................................AAGAAGTACATCACCATGGTCCAG 24 0 1 3.00 3 2 1 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCATC................................................... 24 1 1 3.00 3 0 0 3 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCCAGT............................................... 28 1 1 3.00 3 3 0 0 0 0
......TGTTCATCAGACTCCAGGGCTTTGCCGC............................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0
.ATATTTGTTCATCAGACTCCAGGGC....................................................................................................................................... 25 1 1 3.00 3 0 3 0 0 0
.....................................................................................CGACTACTACCTGTCCTCGGTCAGC................................................... 25 1 1 3.00 3 0 3 0 0 0
...................................................................................ACCTACTACTACCTGTCCTCGGTCAGC................................................... 27 0 1 3.00 3 3 0 0 0 0
.ATACTTGTTCATCAGACTCCAGGGCTTTG................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
................................................................................................TGTCCTCGGTCAGCCAGGCGGTGCAGTC..................................... 28 0 1 2.00 2 2 0 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTC...................................................... 21 0 1 2.00 2 1 1 0 0 0
..............................................................................TGTACACCTACTACTACCTGTCCTCGG........................................................ 27 0 1 2.00 2 2 0 0 0 0
..................................CGTTATCCTTTATTGCGTGCTGAACG..................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
.......GTTCATCAGACTCCAGGGCTTTGCCG................................................................................................................................ 26 0 1 2.00 2 1 1 0 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTCCAT 25 1 1 2.00 2 1 1 0 0 0
.........................................................................................TACTACCTGTCCTCGGTCAGCCAGGCGG............................................ 28 0 1 2.00 2 2 0 0 0 0
......................................ATCCTTTATTGCGTGCTGAACGTGG.................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.......................................TCCTTTATGGCGTGCTGAACGTGGC................................................................................................. 25 1 1 2.00 2 2 0 0 0 0
..TACTTGTTCATCAGACTCCAGGG........................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0
..............................................................................TGTACACCTACTACTACCTGTCCTCGGT....................................................... 28 0 1 2.00 2 2 0 0 0 0
..........................................................................................................CAGCCAGGCGGTGCAGTCGAGTC................................ 23 0 1 2.00 2 2 0 0 0 0
......................................................................................TACTACTACCTGTCCTCGG........................................................ 19 0 1 2.00 2 2 0 0 0 0
....CTTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0
.......................................TCCTTTATGGCGTGCTGAACGTGGCGG............................................................................................... 27 1 1 2.00 2 2 0 0 0 0
.....................................................................................CTACTACTGCCTGTCCTCGGTCAG.................................................... 24 1 1 2.00 2 2 0 0 0 0
............................................TATTGCGTGCTGAACGTGGCGG............................................................................................... 22 0 1 2.00 2 2 0 0 0 0
.....TTGTTCATCAGACTCCAGGGCT...................................................................................................................................... 22 0 1 2.00 2 1 1 0 0 0
......................................................................................TACTACTAACTGTCCTCGGTCAG.................................................... 23 1 1 2.00 2 2 0 0 0 0
.ATACTTGTTCATCAGACTCCAGGGCTTT.................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
...................................GTTATCCTTTATTGCGTGCTGAACGTGG.................................................................................................. 28 0 1 2.00 2 2 0 0 0 0
......................................................................TGTACTGATGTACACCTACTACTACC................................................................. 26 0 1 2.00 2 0 2 0 0 0
.......................................TCCTTTATGGCGTGCTGAACGTGG.................................................................................................. 24 1 1 2.00 2 2 0 0 0 0
........................................................................................................................................TAAGAAGTACATCACCATGGTCCAG 25 1 1 2.00 2 1 1 0 0 0
..............................................................................................................CAGGCGGTGCAGTCGAGTCTGTG............................ 23 0 1 2.00 2 1 1 0 0 0
......................................................................TTTACTGATGTACACCTACTACTACC................................................................. 26 1 1 2.00 2 0 2 0 0 0
................................................................................................................GGCGGTGCAGTCGAGTCTGTGG........................... 22 0 1 2.00 2 2 0 0 0 0
.ATACTTGTGCATCAGACTCCAGGGCTT..................................................................................................................................... 27 1 1 2.00 2 2 0 0 0 0
......................................ATCCTTTATTGCGTGCTGAACGTGGCGG............................................................................................... 28 0 1 2.00 2 2 0 0 0 0
.......GTTCATCAGACTCCAGGGCTTTGCCGC............................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
......................................................................................TAGTACTACCTGTCCTCGGTCAGC................................................... 24 1 1 2.00 2 0 1 1 0 0
.......................................................GAACGTGGCGGTGCATGTACTGATG................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.................................................................................ACACCTACTACTACCTGTCCTCGGT....................................................... 25 0 1 2.00 2 2 0 0 0 0
...........................................................................................................AGCCAGGCGGTGCAGTCGAGTCT............................... 23 0 1 2.00 2 2 0 0 0 0
.AGACTTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0
...........................................................................................................AGCCAGGCGGTGCAGTCGAGTC................................ 22 0 1 2.00 2 2 0 0 0 0
...........................................................................................................AGCCAGGCGGTGCAGTCGAGTCTG.............................. 24 0 1 2.00 2 2 0 0 0 0
..TACTTGTTGATCAGACTCCAGGGCT...................................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAGCCAT................................................ 27 1 1 2.00 2 2 0 0 0 0
........TTAATCAGACTCCAGGGCTTTGCC................................................................................................................................. 24 1 1 2.00 2 0 2 0 0 0
............TCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0
TATACTTGTTCATCAGACTCCAGGGCC...................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0
.......................................................................................ACTACTACCTGTCCTCGGTCAGCCA................................................. 25 0 1 2.00 2 1 1 0 0 0
............................TGCCGCCGTTATCCTTTATTGCGTGC........................................................................................................... 26 0 1 2.00 2 0 0 2 0 0
.....................................................................................................................TGCAGTCGAGTCTGTGGTGGAAG..................... 23 0 1 2.00 2 0 2 0 0 0
............TCAGACTCCAGGGCTTTGCCGCCGTT........................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
.......................................................................................ACTACTACCTGTCCTCGGTCAGC................................................... 23 0 1 2.00 2 2 0 0 0 0
.....TTGTTCATCAGACTCCAGGGCTTTGC.................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0
......................................................................................TACTACTAACTGTCCTCGGTCAGC................................................... 24 1 1 2.00 2 2 0 0 0 0
......................................................................................TACTACTACCTGCCCTCGGTCAGC................................................... 24 1 1 2.00 2 0 0 2 0 0
.AGACTTGTTCATCAGACTCCAGGGC....................................................................................................................................... 25 1 1 2.00 2 0 2 0 0 0
..............................................TTGCGTGCTGAACGTGGCGGTGC............................................................................................ 23 0 1 2.00 2 0 2 0 0 0
.AGACTTGTTCATCAGACTCCAGGGCC...................................................................................................................................... 26 2 1 2.00 2 0 2 0 0 0
......................................................................................TACTACTACCTGTCCTCAGTCAGC................................................... 24 1 1 2.00 2 0 2 0 0 0
........TTCATCAGGCTCCAGGGCTTTGCCGCCG............................................................................................................................. 28 1 1 2.00 2 2 0 0 0 0
..........CATCAGACTCCAGGGCTTTGCCGCCGT............................................................................................................................ 27 0 1 2.00 2 1 0 1 0 0
.ATACTTGTTCATCAGACTCCACGGC....................................................................................................................................... 25 1 1 2.00 2 0 0 2 0 0
...................................................................GCATGTACTGATGTACACCTACTAC..................................................................... 25 0 1 1.00 1 1 0 0 0 0
......................................................................................TAATACTACCTGTCCTCGGTCAGC................................................... 24 1 1 1.00 1 0 1 0 0 0
..........................................TTTATTGCGTGCTGAACGTGGCGG............................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.......................................TCCTTTATCGCGTGCTGAACGTGGCGG............................................................................................... 27 1 1 1.00 1 1 0 0 0 0
......................................................................................TACTACTAACTGTCCTCGGTCAGCCAGG............................................... 28 1 1 1.00 1 1 0 0 0 0
......TGTTCATCAGACTCCAGGGCTTTGCCG................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
........................................................................................CTACTGCCTGTCCTCGGTCAGCCA................................................. 24 1 1 1.00 1 0 1 0 0 0
..............................................TTGCGTGCTGAACGTGGCGGT.............................................................................................. 21 0 1 1.00 1 0 0 0 1 0
........TACATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.ATACTTGTGCATCAGACTCCAGGG........................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
TATACTTGTTCATCAGACTCCACGGC....................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0
............................................................TGGTGGTGCATGTACTGATGTACACC........................................................................... 26 1 1 1.00 1 0 1 0 0 0
..TACTTGTTGATCAGACTCCAGCGCTT..................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
............TCAGACTCCAGGGCTTTGCCGCCGTTA.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.ATACTTGTTCATCAGACTCCGGGGCTT..................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
......................................................................................TAATACTACCTGTCCTCGGTCAGCCA................................................. 26 1 1 1.00 1 0 1 0 0 0
............................................TGTTGCGTGCTGAACGTGGCGGTG............................................................................................. 24 1 1 1.00 1 0 1 0 0 0
.ATACTTGTCCATCAGACTCCAGGGC....................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.ATACTAGTTCATCAGACTCCAGGGC....................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCG..................................................... 22 1 1 1.00 1 1 0 0 0 0
....................................................................................................................GTGCAGTCGAGTCTGTGGTGGAAGAAA.................. 27 1 1 1.00 1 0 1 0 0 0
......................................................................................TTCTACTACCTGTCCTCGGTCAGC................................................... 24 1 1 1.00 1 0 0 1 0 0
........................................................................................CTACTACCTGTCCCCGGTCAGCCAGG............................................... 26 1 1 1.00 1 0 0 1 0 0
........................................................................................................................................GAAGAAGTGCATCACCATGGTCCAG 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAACC.................................................. 26 1 1 1.00 1 1 0 0 0 0
...........ATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................GAAGTAGTACATCACCATGGT.... 21 1 1 1.00 1 0 0 1 0 0
......TGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
............................................................................................................GCCAGGCGGTGCAGTCGAGTCTGTGGT.......................... 27 0 1 1.00 1 1 0 0 0 0
........................................................................................CTACTACCAGTCCTCGGTCAGCCA................................................. 24 1 1 1.00 1 1 0 0 0 0
......................................................................................TACTACTACCTGTCCTCTGTCAGC................................................... 24 1 1 1.00 1 0 0 1 0 0
.......................................TCCTTTATTGCGTGCTGGACGTGGCGG............................................................................................... 27 1 1 1.00 1 1 0 0 0 0
........TTCATCAGACTCCAGGGCTTTGCCCCCG............................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0
TGTACTTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
.........TCATCAGACTCCAGGGCTTTGCCGC............................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.ATACTTGTGCATCAGACTCCAGGGCT...................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGCCAGC................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................TGCAGTCGAGTCTGTGGTGGAAGAAG.................. 26 0 1 1.00 1 0 0 0 1 0
..................................................................................CACCTACTACTACCTGTCCTCGGTCA..................................................... 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................TCCTCGGTCAGCCAGGCGGTGCAGTCGA................................... 28 0 1 1.00 1 1 0 0 0 0
......................................................................................TACTACTAGCTGGCCTCGGTCAG.................................................... 23 2 1 1.00 1 1 0 0 0 0
....................................TTATCCTTTATTGCGTGCTGAACG..................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
...................................GTTATCCTTTATTGCGTGCTGAACGTG................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..................................................................................................TCCTCGGTCAGCCAGGCGGTGCAGTC..................................... 26 0 1 1.00 1 0 1 0 0 0
.................................................................................................................GCGGTGCAGTCGAGTCTGTGG........................... 21 0 1 1.00 1 0 0 0 1 0
................................GCCGTTATCCTTTATTGCGTGCTG......................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................TACCTGTCCTCGGTCAGCCAGG............................................... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................CAGCCAGGCGGTGCAGTCGAG.................................. 21 0 1 1.00 1 0 1 0 0 0
......................................................................................TACTACTACCCGTCCTCGGTCAGC................................................... 24 1 1 1.00 1 1 0 0 0 0
........................................................................................TTACTACCTGTCCTCGGTCAGCCAGG............................................... 26 1 1 1.00 1 1 0 0 0 0
..TACTTGGTCATCAGACTCCAGGGC....................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0
..................................................................................................TCCTCGGTCAGCCAGGCGGTGC......................................... 22 0 1 1.00 1 0 0 0 0 1
......................................................................................TACTACTACCTGTCCTCGGTCAGCCATT............................................... 28 2 1 1.00 1 1 0 0 0 0
.......................................TCCTTTATGGCGTGCTGAACGTG................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTCCAA 25 1 1 1.00 1 0 1 0 0 0
..................................................................................CACCTACTACTACCTGTCCTCGGTCAG.................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................TTTATTGCGTGCTGAACGTGGCGGT.............................................................................................. 25 0 1 1.00 1 1 0 0 0 0
......TGCTCATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 29 1 1 1.00 1 0 1 0 0 0
...........................................................................................................AGCCAGGCGGTGCAGTCGAGTCTGTG............................ 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................TGCAGTCGAGTCTGTGGTGGAAGAT................... 25 1 1 1.00 1 0 1 0 0 0
...............................................TGCGTGCTGAACGTGGCGGTGCATG......................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................TCCTCGGTCAGCCAGGCGGTGCA........................................ 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCAGCA.................................................. 26 1 1 1.00 1 0 1 0 0 0
....................................................GCTGAACGTGGCGGTGCA........................................................................................... 18 0 1 1.00 1 1 0 0 0 0
........TTAATCAGACTCCAGGGCTTTGCCG................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0
.....TTGTTCATGAGACTCCAGGGCTTTGCCGC............................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
.................................CCGTTATCCTTTATTGCGTGCTGAACGTG................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.......CTTCATCAGACTCCAGGGCTTTGCCGCC.............................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0
.....................................TATCCTTTATTGCGTGCTGAAGGTGGC................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
........................................CCTTTATTGCGTGCTGAACGTGGCG................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
...................................................................................ACCTACTACTACCTGTCCTCGGTCA..................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................AAGAAGTACATCACCATGGTCCA. 23 0 1 1.00 1 1 0 0 0 0
......................................................................................TACTACTACCTGTCCTCGGACAAC................................................... 24 2 1 1.00 1 0 0 1 0 0
...............................................................................CTACACCTACTACTACCTGTCCTCGGT....................................................... 27 1 1 1.00 1 0 1 0 0 0
........TTCATCAGACTCCAGGGCTCTGCCGCC.............................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
..TACTTGTTAATCAGACTCCAGGGCTT..................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...........................................................................................CTACCTGTCCTCGGTCAG.................................................... 18 0 1 1.00 1 1 0 0 0 0
.ATACTTGTTCATCAGACTCCAG.......................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
...........................................TTATTGCGTGCTGAACGTGGCGG............................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.ATACTTGTTCATCAGACTCCAAGGCTT..................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
..........................................................................CTGATGTACACCTACTACTACCTGTCC............................................................ 27 0 1 1.00 1 1 0 0 0 0
..........CATCAGACTCCAGGGCTTTGCCGC............................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
......TGTTCATTCGACTCCAGGGCTTTGCC................................................................................................................................. 26 2 1 1.00 1 0 1 0 0 0
...................................................................................................CCTCGGTCAGCCAGGCGGT........................................... 19 0 1 1.00 1 1 0 0 0 0
........................................................................................CTACTACCTGTCCTCGGTCAGGC.................................................. 23 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGTACAG 25 1 1 1.00 1 0 0 1 0 0
......................................................................................TACTACTAGCTGTCCTCGGTCAGCCAG................................................ 27 1 1 1.00 1 1 0 0 0 0
.....................................................................................CTTCTACTACCTGTCCTCGGTCAGCCAG................................................ 28 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................GGAGAAGTACATCACCATGGTCC.. 23 1 1 1.00 1 0 1 0 0 0
......................................................................................TACTACTAGCTGTCCTCGGTCAG.................................................... 23 1 1 1.00 1 1 0 0 0 0
..TACCTGTTCATCAGACTCCAGGGCT...................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
......TGTTCATCAGACTCCAGGGCT...................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
....................................................................................CCTACTACTACCTGTCCTCGGTCAGCC.................................................. 27 0 1 1.00 1 1 0 0 0 0
................................................................................TAAACCTACTACTACCTGTCCTCGG........................................................ 25 1 1 1.00 1 0 1 0 0 0
........TTCATCAGACTCCAGGGCTTTG................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...ACTTGTTCATCAGACTCCAGGG........................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
..TACTTGTTCATCAGACTCCAGGGCC...................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
............................TGCCGCCGGTATCCTTTATTGCGTGC........................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.............CAGACTCCAGGGCTTTGCCGCCGT............................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0
.......GGTCATCAGACTCCAGGGCTTTGC.................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0
.....................................................................................................TCGGTCAGCCAGGCGGTGCAGTC..................................... 23 0 1 1.00 1 0 1 0 0 0
.....TTGTTCATCAGACTCCAGGGCTT..................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.........................................................................................................TCAGCCAGGCGGTGCAGTCGAGTCTG.............................. 26 0 1 1.00 1 1 0 0 0 0
......................................................................................TACTACTACCTGTCCTCGGTCAAC................................................... 24 1 1 1.00 1 0 1 0 0 0
.ATACTTGTTCATCAGACTCCAGGGTT...................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
............................................................................................TACCTGTCCTCGGTCAGCC.................................................. 19 0 1 1.00 1 0 1 0 0 0
..........................................................CGTGGCGGTGCATGTACTGATGTA............................................................................... 24 0 1 1.00 1 1 0 0 0 0
TATACTTGTTCATCAGACTCCAGGAC....................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0
.......................................................................................................................................GGAAGAAGTACATCACCATGGTCCA. 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................CTACTACTGCCTGTCCTCGGTCA..................................................... 23 1 1 1.00 1 1 0 0 0 0
......TGCTCATCAGACTCCAGGGCTTTG................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
......................................................................................TACTACTCCCTGTCATCGGTCAGC................................................... 24 2 1 1.00 1 0 1 0 0 0
..............................................TTGCGTGCTGAACGTGGCGTT.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0
..........................................................CTTGGCGGTGCATGTACTGATGTACACC........................................................................... 28 1 1 1.00 1 0 1 0 0 0
.....................................................................................CTACTACTACCTGTCCTCGGTCATC................................................... 25 1 1 1.00 1 0 0 1 0 0
.ATACTTGTGCATCAGACTCCAGGGC....................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
....TTCTTTCATCAGACTCCAGGGCTTTGC.................................................................................................................................. 27 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................GAAGAAGTACATCACCATGGT.... 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................TACGACCTGTCCTCGGTCAGCCAGGCT............................................. 27 2 1 1.00 1 0 1 0 0 0
......................................................................................TACTACTACCTGTCCTCGGCCAGCC.................................................. 25 1 1 1.00 1 0 1 0 0 0
...........................................................................TGATGTACACCTACTACTACCTGTCC............................................................ 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................GTACTACTACCTGTCCTCGGTCAGCC.................................................. 26 1 1 1.00 1 1 0 0 0 0
................................GCCGTTATCCTTTATTGCGTGCTGAA....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
......................................................................................TAATACTACCTGTCCTCGGTCAGCT.................................................. 25 2 1 1.00 1 0 1 0 0 0
.ATACTTGTCCATCAGACTCCAGGGCTT..................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
............................................................................................TACCTGTCCTCGGTCAGCCAGGCG............................................. 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................CTACTACTTCCTGTCCTCGGTCAGCCAG................................................ 28 1 1 1.00 1 1 0 0 0 0
.......................................................GAGCGTGGCGGTGCATGTACTGATG................................................................................. 25 1 1 1.00 1 1 0 0 0 0
................................................................................TACACCTAGTACTACCTGTCCTCGGTCA..................................................... 28 1 1 1.00 1 1 0 0 0 0
..................................................................................................................CGGTGCAGTCGAGTCTGTGG........................... 20 0 1 1.00 1 0 0 0 1 0
..................................................GTGCTGAACGTGGCGGTGCA........................................................................................... 20 0 1 1.00 1 0 0 0 1 0
........TTCATCAGGCTCCAGGGCTTTGCCGCC.............................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.......................................ACCTTTATTGCGTGCTGAACGTGGCGG............................................................................................... 27 1 1 1.00 1 1 0 0 0 0
...........................................................................................................AGCCAGGCGGTGCAGTCGAGTCTGT............................. 25 0 1 1.00 1 1 0 0 0 0
........................................................................................CTACTACCTGTCCTCGGTCAGCCAGGCGG............................................ 29 0 1 1.00 1 0 1 0 0 0
..................................................................................................TCCTCGGTCAGCCAGGCGG............................................ 19 0 1 1.00 1 1 0 0 0 0

Anti-sense strand reads

ATATGAACAAGTAGTCTGAGGTCCCGAAACGGCGGCAATAGGAAATAACGCACGACTTGCACCGCCACGTACATGACTACATGTGGATGATGATGGACAGGAGCCAGTCGGTCCGCCACGTCAGCTCAGACACCACCTTCTTCATGTAGTGGTACCAGGTC
************************************..((.((((((.((((((.((.((.((((..(((((....)))))........))))...)).)).)))).)).)))))).))...*************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body
..........................................................................................................................AGCTCAGACACCACCTTCTTCATG............... 24 0 1 35.00 35 26 7 2 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCATG............... 25 0 1 31.00 31 21 10 0 0
......................................................................................................................CGTCAGCTCAGACACCACCTTCTTCATG............... 28 0 1 26.00 26 23 3 0 0
........................................................................................................................TCAGCTCAGACACCACCTTCTTCATG............... 26 0 1 25.00 25 12 13 0 0
.......................................................................................................................GTCAGCTCAGACACCACCTTCTTCATG............... 27 0 1 20.00 20 19 1 0 0
..ATGAACTAGTAGTATGAGG............................................................................................................................................ 19 2 4 13.00 52 6 46 0 0
........................CGAAACGGCGGCAATAGGAAATA.................................................................................................................. 23 0 1 12.00 12 2 10 0 0
.................................................................................................CAGGAGCCAGTCGGTCCGCCACGT........................................ 24 0 1 11.00 11 0 11 0 0
..........................................................................GACTACATGTGGATGATGATGG................................................................. 22 0 1 10.00 10 6 2 1 1
........................CGAAACGGCGGCAATAGGAAATAAC................................................................................................................ 25 0 1 9.00 9 2 7 0 0
.........................................................................TGACTACATGTGGATGATGATGG................................................................. 23 0 1 9.00 9 6 3 0 0
.............................................................................................................................TCAGACACCACCTTCTTCATG............... 21 0 1 7.00 7 0 7 0 0
...........................................................................................................................GCTCAGACACCACCTTCTTCATG............... 23 0 1 6.00 6 4 1 1 0
................................CGGCAATAGGAAATAACGCACGACTT....................................................................................................... 26 0 1 5.00 5 0 5 0 0
....................................................................GTACATGACTACATGTGGATGATGATGG................................................................. 28 0 1 5.00 5 4 1 0 0
......................CCCGAAACGGCGGCAATAGGAAATAAC................................................................................................................ 27 0 1 5.00 5 1 4 0 0
....................................................................GTACATGACTACATGTGGATGATGATG.................................................................. 27 0 1 5.00 5 3 1 1 0
.......................................................................CATGACTACATGTGGATGATGATGG................................................................. 25 0 1 4.00 4 3 0 1 0
..............................................................................................GGACAGGAGCCAGTCGGTCCGCCA........................................... 24 0 1 4.00 4 1 1 2 0
...................................................................................................GGAGCCAGTCGGTCCGCCACGT........................................ 22 0 1 4.00 4 3 1 0 0
............................................ATAACGCACGACTTGCACCGCCACGT........................................................................................... 26 0 1 4.00 4 0 4 0 0
......................................................................................................................CGTCAGCTCAGACACCACCTTCTTCAT................ 27 0 1 4.00 4 3 1 0 0
.......................................AGGAAATAACGCACGACTTGCACCG................................................................................................. 25 0 1 4.00 4 1 3 0 0
............................................................................................................................CTCAGACACCACCTTCTTCATG............... 22 0 1 4.00 4 1 3 0 0
.........................GAAACGGCGGCAATAGGAAATAAC................................................................................................................ 24 0 1 4.00 4 3 1 0 0
........................CGAAACGGCGGCAATAGGAAAGA.................................................................................................................. 23 1 1 3.00 3 0 3 0 0
..........................................................................................................................AGCTCAGACACCACCTTCTTCAGG............... 24 1 1 3.00 3 0 3 0 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCATGT.............. 26 0 1 3.00 3 3 0 0 0
......................................................................................................................................ACCTTCTTCATGTAGTGGTACCAGGT. 26 0 1 3.00 3 0 3 0 0
......................................................................ACATGACTACATGTGGATGATGATGG................................................................. 26 0 1 3.00 3 2 1 0 0
.......................................................................................................................GTCAGCTCAGACACCACCTTCTTCAT................ 26 0 1 3.00 3 3 0 0 0
....................................................................GTACATGACTACATGTGGATGATGAT................................................................... 26 0 1 3.00 3 0 1 2 0
................................................................................................................CCGCCACGTCAGCTCAGACACCACCT....................... 26 0 1 3.00 3 2 1 0 0
........................CGAAACGGCGGCAATAGGAAA.................................................................................................................... 21 0 1 3.00 3 1 2 0 0
...........................AACGGCGGCAATAGGAAATAAC................................................................................................................ 22 0 1 3.00 3 2 1 0 0
.........................................................................CGACTACATGTGGATGATGATGG................................................................. 23 1 1 3.00 3 0 3 0 0
........................CGAAACGGCGGCAATAGGAAAT................................................................................................................... 22 0 1 3.00 3 1 2 0 0
................................................................................................ACAGGAGCCAGTCGGTCCGCCACGT........................................ 25 0 1 3.00 3 3 0 0 0
........................................................................................GATGATGGACAGGAGCCAGTCGGT................................................. 24 0 1 2.00 2 1 1 0 0
........................................GGAAATAACGCACGACTTGCACCGCC............................................................................................... 26 0 1 2.00 2 2 0 0 0
....................................................................................................................................CCACCTTCTTCATGTAGTGGTACCAGGT. 28 0 1 2.00 2 1 1 0 0
...................GGTCCCGAAACGGCGGCAATAGGAAAT................................................................................................................... 27 0 1 2.00 2 2 0 0 0
........................................................................................................................TCAGCTCAGACACCACCTTCTTCAGG............... 26 1 1 2.00 2 0 2 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAGACAC............................ 25 0 1 2.00 2 2 0 0 0
.......................CCGAAACGGCGGCAATAGGAAAT................................................................................................................... 23 0 1 2.00 2 0 2 0 0
..............................................................................................................GTCCGCCACGTCAGCTCAGACACCACC........................ 27 0 1 2.00 2 2 0 0 0
...................................................................................................................CCACGTCAGCTCAGACACCACCTTCT.................... 26 0 1 2.00 2 0 2 0 0
.................................................................................................................CGCCACGTCAGCTCAGACACCACCT....................... 25 0 1 2.00 2 0 2 0 0
................................................................CCACGTACATGACTACATGTGGATGAT...................................................................... 27 0 1 2.00 2 0 2 0 0
.......................CCGAAACGGCGGCAATAGGAAA.................................................................................................................... 22 0 1 2.00 2 0 2 0 0
........................................................................................................................TCAGCTCAGACACCACCTTCTTCATGT.............. 27 0 1 2.00 2 2 0 0 0
.................................................................................................................CGCCACGTCAGCTCAGACACCATC........................ 24 1 1 2.00 2 0 2 0 0
........................................................................................................................CCAGCTCAGACACCACCTTCTTCATG............... 26 1 1 2.00 2 0 2 0 0
..................................................................................................AGGAGCCAGTCGGTCCGCCACTT........................................ 23 1 1 2.00 2 0 2 0 0
..........................................................................................................................AGCTCAGACACCACCTTCTTCAT................ 23 0 1 2.00 2 2 0 0 0
......................................TAGGAAATAACGCACGACTTGCACCG................................................................................................. 26 0 1 2.00 2 0 2 0 0
...........................................................................................................................GCTCAGACACCACCTTCTTCAGG............... 23 1 1 2.00 2 0 2 0 0
..........................................................................................................................AGCTCAGACACCACCGTCTTCATG............... 24 1 1 1.00 1 1 0 0 0
......................CCCGAAACGGCGGCAATAGGAAATAA................................................................................................................. 26 0 1 1.00 1 0 1 0 0
........................................................................................................................TCAGCTCAGACACCACCTTCTTCACG............... 26 1 1 1.00 1 1 0 0 0
................................................................CCACGTACATGACTACATGTGGATGA....................................................................... 26 0 1 1.00 1 0 1 0 0
......................................................................ACATGACTACATGTGGATGATGATG.................................................................. 25 0 1 1.00 1 1 0 0 0
......................................................................................................................................ACCTTCTTCATGTAGTGGTACCAGTT. 26 1 1 1.00 1 0 1 0 0
................................CGGCAATAGGAAATAACGCACGACT........................................................................................................ 25 0 1 1.00 1 0 1 0 0
.................................................................................................................CGCCACGTCAGCTCAGACACCACC........................ 24 0 1 1.00 1 1 0 0 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCATGTAGT........... 29 0 1 1.00 1 1 0 0 0
.......................................................................................TGATGATGGACAGGAGCCAGTCGGT................................................. 25 0 1 1.00 1 0 1 0 0
...........................AACGGCGGCAATAGGAAATAA................................................................................................................. 21 0 1 1.00 1 1 0 0 0
........................................GGAAATAACGCACGACTTGCACCGACA.............................................................................................. 27 1 1 1.00 1 0 1 0 0
..............ACTGAGGTCCCGAAACGGCGGCAA........................................................................................................................... 24 1 1 1.00 1 1 0 0 0
.............................................................................................TGGACAGGAGCCAGTCGGTCCGC............................................. 23 0 1 1.00 1 0 1 0 0
...................................................................................................................CCACGTCAGCTCAGACACCACCTTCTT................... 27 0 1 1.00 1 0 1 0 0
......................................CAGGAAATAACGCACGACTTGCACCGC................................................................................................ 27 1 1 1.00 1 0 1 0 0
.................................................................................................CAGGAGCCAGTCGGTCCGCCGATT........................................ 24 3 1 1.00 1 0 1 0 0
....................................................................GTCCATGACTACATGCGCATGATGATG.................................................................. 27 3 1 1.00 1 0 0 1 0
...TGAACAAGTAGTCTGAGGTCCCGA...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.........................................................................TGACTACATGTGGATGATGACGG................................................................. 23 1 1 1.00 1 0 1 0 0
.............................................................................................................GGTCCGCCACGTCAGCTCAGACACCA.......................... 26 0 1 1.00 1 0 1 0 0
.........................................................................................................................CAGTTCAGACACCACCTTCTTCATG............... 25 1 1 1.00 1 1 0 0 0
.....................................................................TACATGACTACATGTGGATGATGATGG................................................................. 27 0 1 1.00 1 1 0 0 0
..............................................................................................................GTCCGCCACGTCAGCTCAGACACCAC......................... 26 0 1 1.00 1 0 1 0 0
..........................AAACGGCGGCAATAGGAAATAAC................................................................................................................ 23 0 1 1.00 1 1 0 0 0
.................................GGCAATAGGAAATAACGCACGACTT....................................................................................................... 25 0 1 1.00 1 0 1 0 0
.........................................................................CGACTACATGTGGATGATGATTG................................................................. 23 2 1 1.00 1 0 1 0 0
........................................................................................................................TCAGCTCAGACACCACCTTC..................... 20 0 1 1.00 1 1 0 0 0
..............................GGCGGCAATAGGAAATAACGCACGACT........................................................................................................ 27 0 1 1.00 1 1 0 0 0
.....................................................................................................AGCCAGTCGGTCCGCCACGTCAGC.................................... 24 0 1 1.00 1 1 0 0 0
.............................................................................................................................CCAGACACCACCTTCTTTATG............... 21 2 1 1.00 1 0 1 0 0
.......................................................................................................................GTCAGCTCAGACACCACCTTCTTCAGG............... 27 1 1 1.00 1 0 1 0 0
......................................................................................................................CGTCAGCTCAGACACCACCGTCTTCATG............... 28 1 1 1.00 1 1 0 0 0
................................................CGCACGACTTGCACCGCCACGGA.......................................................................................... 23 1 1 1.00 1 0 1 0 0
.................GAGGTCCCGAAACGGCGGCAATAG........................................................................................................................ 24 0 1 1.00 1 1 0 0 0
...............CTGAGGTCCCGAAACGGCGGCA............................................................................................................................ 22 0 1 1.00 1 1 0 0 0
..........................................................................................................................AGCTCAGACACCACCTTCTTCATGTA............. 26 0 1 1.00 1 1 0 0 0
......................................................................................................................CGTCAGCTCAGACACCACCTTCTTCA................. 26 0 1 1.00 1 0 1 0 0
..................................................................................................AGGAGCCAGTCGGTCCGCCACGT........................................ 23 0 1 1.00 1 0 1 0 0
.......................................................................CATGACTACATGTGGATGATGATG.................................................................. 24 0 1 1.00 1 1 0 0 0
............................................................................................................................CTCAGACACCACCTTCTTCAT................ 21 0 1 1.00 1 1 0 0 0
...................................................................................................GGAGCCAGTCGGTCCGCCACG......................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................................................................CCAGACACCACCTTCTTCATGTAGT........... 25 1 1 1.00 1 0 1 0 0
..........................................................................................TGATGGACAGGAGCCAGTCGGTCCG.............................................. 25 0 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAGAC.............................. 23 0 1 1.00 1 0 1 0 0
.................................GCCACTAGGAAATAACGCACGACTT....................................................................................................... 25 2 1 1.00 1 0 0 1 0
.................................................................................................CAGGAGCCAGTCGGTACGCCACGT........................................ 24 1 1 1.00 1 0 1 0 0
............................................................................................................CGGTCCGCCACGTCATCTCAG................................ 21 1 1 1.00 1 0 1 0 0
.......................................AGGAAATAACGCACGACTTGCACCGCCAC............................................................................................. 29 0 1 1.00 1 1 0 0 0
...................................................................................TGGATGATGATGGACAGGAGCCAGT..................................................... 25 0 1 1.00 1 1 0 0 0
....................................................................................................GAGCCAGTCGGTCCGCCACGT........................................ 21 0 1 1.00 1 1 0 0 0
................................................................CCACGTACATGACTACATGTGGATTA....................................................................... 26 1 1 1.00 1 0 1 0 0
.......................................................................................................................GTCAGCTCAGACACCACCTTCTTCAG................ 26 1 1 1.00 1 1 0 0 0
.......................CCGAAACGGCGGCAATAGGAAATAAC................................................................................................................ 26 0 1 1.00 1 0 1 0 0
...............................................................................................GACAGGAGCCAGTCGGTCCGCCAC.......................................... 24 0 1 1.00 1 1 0 0 0
........................................................................................................................ACAGCTCAGACACCACCTTCTTCATG............... 26 1 1 1.00 1 0 1 0 0
..................................................................ACGTACATGACTACATGTGTATGATGAT................................................................... 28 1 1 1.00 1 1 0 0 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCATGTAG............ 28 0 1 1.00 1 1 0 0 0
......................CCCGAAACGGCGGCAATAGGAAATA.................................................................................................................. 25 0 1 1.00 1 0 1 0 0
..........................................................................................................GTCGGTCCGCCACGTCAGCTC.................................. 21 0 1 1.00 1 1 0 0 0
.......................................AGGAAATAACGCACGACTTGCACCGC................................................................................................ 26 0 1 1.00 1 1 0 0 0
................................................................................................................CCGCCACGTCAGCTCAGACACCACCTTCT.................... 29 0 1 1.00 1 1 0 0 0
................................................................................................................CCGCCACGTCAGCTCAGACACCACC........................ 25 0 1 1.00 1 1 0 0 0
.......................................................................................................CCAGTCGGTCCGCCACGTCAGCTCAG................................ 26 0 1 1.00 1 1 0 0 0
..........................................................................GACTACATGTGGATGATGATTG................................................................. 22 1 1 1.00 1 0 1 0 0
.......................CCGAAACGGCGGCAATAGGAAATA.................................................................................................................. 24 0 1 1.00 1 0 1 0 0
...................................................................................................................CCACGTCAGCTCAGACACCACC........................ 22 0 1 1.00 1 1 0 0 0
..........................................................................................................................AGCTCAGACACCACCTTCTTCATGT.............. 25 0 1 1.00 1 1 0 0 0
.....................................................................................................................................CACCTTCTTCATGTAGTGGTACCAGGT. 27 0 1 1.00 1 1 0 0 0
...............CTGAGGTCCCGAAACGGCGGCAA........................................................................................................................... 23 0 1 1.00 1 0 1 0 0
.........................................................................................................................CAGCTCATACACCACCTTCTTCATG............... 25 1 1 1.00 1 0 0 1 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCAGG............... 25 1 1 1.00 1 0 1 0 0
....................................................................................................................................CCACCTTCTTCATGTAGTGGTACCAGTT. 28 1 1 1.00 1 0 1 0 0
..............................................................................................................................CAGACACCACCTTCTTCATGT.............. 21 0 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAG................................ 21 0 1 1.00 1 1 0 0 0
.................................................GCACGACTTGCACCGCCAC............................................................................................. 19 0 1 1.00 1 1 0 0 0
...........................................................................................................................GCTCAGACACCACCTTCTTCATT............... 23 1 1 1.00 1 0 1 0 0
.............................................................................................................GGTCCGCCACGTCAGCTCAGACA............................. 23 0 1 1.00 1 0 1 0 0
...............................................................................................................TCCGCCACGTCAGCTCAGACACCACC........................ 26 0 1 1.00 1 1 0 0 0
................................................................................................................CCGCCACGTCAGCTCAGACACCACCTT...................... 27 0 1 1.00 1 1 0 0 0
.......................................................................................................................GTCAGCTCAGACACCACCTTCTTCATGT.............. 28 0 1 1.00 1 1 0 0 0
.......CAAGTAGTCTGAGGTCCCGAA..................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
.............GTCTGAGGTCCCGAAACGGCGGCAA........................................................................................................................... 25 0 1 1.00 1 1 0 0 0
........................................................................ATGACTACATGTGGATGATGA.................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................GATGATGATGGACAGGAGCCAG...................................................... 22 0 1 1.00 1 0 1 0 0
.............................................................................................................................TCAGACACCACCTTCTTCATGTAGT........... 25 0 1 1.00 1 0 1 0 0
..............TCTGAGGTCCCGAAACGGCGGCAAT.......................................................................................................................... 25 0 1 1.00 1 0 1 0 0
........................CGAAACGGCGGCAATAGGAAATAGC................................................................................................................ 25 1 1 1.00 1 0 1 0 0
.................................................................................................CAGGAGCCAGTCGGTCCGCCACGTC....................................... 25 0 1 1.00 1 0 1 0 0
..............CCTGAGGTCCCGAAACGGCGGCAAT.......................................................................................................................... 25 1 1 1.00 1 0 1 0 0
...................................................................................................GGAGCCAGTCGGTCCGCCACGTC....................................... 23 0 1 1.00 1 0 1 0 0
....................................................................................................GAGCCAGTCGGTCCGCCATGGC....................................... 22 2 1 1.00 1 0 1 0 0
........................CGAAACGGCGGCAATAGGAAATAA................................................................................................................. 24 0 1 1.00 1 0 1 0 0
...................................................................AGTACATGACTACATGTGGATGATGACGG................................................................. 29 2 1 1.00 1 0 1 0 0
............AGTCTGAGGTCCCGAAACGGCGGCA............................................................................................................................ 25 0 1 1.00 1 0 1 0 0
.......................................................................................................................GTCAGCTCAGACACCACCTTCTTCGT................ 26 1 1 1.00 1 0 1 0 0
........................................................................................................................TCAGCTCAGACCCCACCTTCTTCAGG............... 26 2 1 1.00 1 0 1 0 0
............................................AAAACGCACGACTTGCACCG................................................................................................. 20 1 1 1.00 1 1 0 0 0
.............................................................................................................................CCAGACACCACCTTCTTCATGTAGTGGT........ 28 1 1 1.00 1 0 1 0 0
..........................................................................................................................TGCTCAGACACCACCTTCTTCATG............... 24 1 1 1.00 1 0 1 0 0
..........................................................................................................GTCGGTCCGCCACGTCAGCTCAGAC.............................. 25 0 1 1.00 1 1 0 0 0
....................GTCCCGAAACGGCGGCAATAGGAAATAAC................................................................................................................ 29 0 1 1.00 1 1 0 0 0
........................................................................................................................CCAGCTCAGACACCACCTTCTTCATGT.............. 27 1 1 1.00 1 0 1 0 0
.............................................................................................TGGACAGGAGCCAGTCGGT................................................. 19 0 1 1.00 1 0 0 0 1
..................................................................................................................GCCACGTCAGCTCAGACACCACCTTCTT................... 28 0 1 1.00 1 1 0 0 0
....................GTCCCGAAACGGCGGCAATAGGAAAT................................................................................................................... 26 0 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAGACA............................. 24 0 1 1.00 1 1 0 0 0
.......................................................................................................................................CCTTCTTCATGTAGTGGTACCAGGT. 25 0 1 1.00 1 0 1 0 0
.......................CCAAAAGGGCGGCAATAGGAAATA.................................................................................................................. 24 2 1 1.00 1 0 0 1 0
..................................................................................................................GCCACGTCAGCTCAGACACCACCT....................... 24 0 1 1.00 1 0 1 0 0
..............................................................................................................................CAGACACCACCTTCTTCATG............... 20 0 1 1.00 1 0 1 0 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCAT................ 24 0 1 1.00 1 1 0 0 0
...................................................................................................................CCACGTCAGCTCAGACACCACCTTC..................... 25 0 1 1.00 1 1 0 0 0
........................................GGAAATAACGCACGACTTGCACCG................................................................................................. 24 0 1 1.00 1 0 1 0 0
.............GTCTGAGGTCCCGAAACAGCGGCAAT.......................................................................................................................... 26 1 1 1.00 1 1 0 0 0
.....................TCCCGAAACGGCGGCAATAGGAAATAAC................................................................................................................ 28 0 1 1.00 1 1 0 0 0
.............................................................CCGCCACGTACATGACTACAT............................................................................... 21 0 1 1.00 1 0 1 0 0
.................................................................................................CAGGAGCCAGTCCGTCCGCCACGT........................................ 24 1 1 1.00 1 0 1 0 0
......................................................................TCATGACTACATGTGGATGATGATG.................................................................. 25 1 1 1.00 1 1 0 0 0
......................................................................................ATGATGATGGACAGGAGCCAGTCGGT................................................. 26 0 1 1.00 1 1 0 0 0
...................................CAATAGGAAATAACGCACGACTTGCAC................................................................................................... 27 0 1 1.00 1 0 1 0 0
..........................................................................GACTACATGTGGATGATGATG.................................................................. 21 0 1 1.00 1 1 0 0 0
..................................GCAATAGGAAATAACGCACGACTT....................................................................................................... 24 0 1 1.00 1 1 0 0 0
..................................................................................................................GCCACGTCAGCTCAGACACCACC........................ 23 0 1 1.00 1 1 0 0 0
.........................................................................................................................CAGCTCAGACACCACCGTCTTCATG............... 25 1 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCTGACA............................. 24 1 1 1.00 1 0 1 0 0
...........AAGTCTGAGGTCCCGAAACGGCGGCAA........................................................................................................................... 27 1 1 1.00 1 1 0 0 0
........................................GGAAATAACGCACGACTTGCAC................................................................................................... 22 0 1 1.00 1 0 1 0 0
.......................................................................................CGATGATGGACAGGAGCCAGTCGGT................................................. 25 1 1 1.00 1 0 1 0 0
.....................................................................................................................ACGTCAGCTCAGACACCACCTTCTTCAT................ 28 0 1 1.00 1 1 0 0 0
...............................................................................................GACAGGAGCCAGTCGGTCCGCCACG......................................... 25 0 1 1.00 1 0 1 0 0
......................................................................................................................CGTCAGCTCAGACACCACCTTCTTCAGG............... 28 1 1 1.00 1 0 1 0 0
.................................................................................................................CGCCACGTCAGCTCAGACACCACCTT...................... 26 0 1 1.00 1 0 1 0 0
....................................................................................................................CACGTCAGCTCAGACACCACCTTCTT................... 26 0 1 1.00 1 0 1 0 0
..................................................CACGACTTGCACCGCCACGTACATTA..................................................................................... 26 1 1 1.00 1 0 1 0 0
................................................................................................................CCGCCACGTCAGCTCAGACACCAC......................... 24 0 1 1.00 1 1 0 0 0
.........................................................................TGACTACATGTGGATGATGATG.................................................................. 22 0 1 1.00 1 1 0 0 0
........................................GGAAATAACGCACGACTTGCACCGCCAC............................................................................................. 28 0 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAGACACCAC......................... 28 0 1 1.00 1 1 0 0 0
................................................................................................................CCGCCACGTCAGCTCAGACACCA.......................... 23 0 1 1.00 1 1 0 0 0
.....................................................................TACATGACTACATGTGGATGATGATTG................................................................. 27 1 1 1.00 1 0 1 0 0
.................................................................................................CAGGAGCCAGTCGGTCCGCCACCT........................................ 24 1 1 1.00 1 0 1 0 0
.........................................................................................................................CAGCTCAGACACCACCTTCTTCA................. 23 0 1 1.00 1 0 1 0 0
.................................................................................................CAGGAGCCAGTCGGTCCGCCACTG........................................ 24 2 1 1.00 1 0 1 0 0
.................................................GCACGACTTGCACCGCCACGTACAT....................................................................................... 25 0 1 1.00 1 1 0 0 0
............AGTCTGAGGTCCCGAAACGGCGGCAAT.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0
......................................................................................................GCCAGTCGGTCCGCCACGTCAGCTCA................................. 26 0 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAGACACCA.......................... 27 0 1 1.00 1 1 0 0 0
............AGTCTGAGGTCCCGAAACGGCGGC............................................................................................................................. 24 0 1 1.00 1 1 0 0 0
....................................................................................................................CACGTCAGCTCAGACACCACCTT...................... 23 0 1 1.00 1 0 1 0 0
.........................................................................CGACTACATGTGGATGATGACGG................................................................. 23 2 1 1.00 1 0 1 0 0
.........................................................................TGACTACATGTGGATGATGATTG................................................................. 23 1 1 1.00 1 0 1 0 0
...................................................................................................................CCACGTCAGCTCAGACACCACCTT...................... 24 0 1 1.00 1 0 1 0 0
....................................................................TTACATGACTACATGTGGATGATGATG.................................................................. 27 1 1 1.00 1 1 0 0 0
............................................................................................................CGGTCCGCCACGTCAGCTCAGACACCACC........................ 29 0 1 1.00 1 1 0 0 0
..............................GGCGGCAATAGGAAATAAC................................................................................................................ 19 0 1 1.00 1 1 0 0 0
...........TAGTCTGAGGTCCCGAAACGGCGGCAA........................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.............................................................................................................GGTCCGCCACGTCAGCTCAGACACCAC......................... 27 0 1 1.00 1 1 0 0 0
................................................................................................................CCGCCACGTCAGCTCAGAGACCACCTT...................... 27 1 1 1.00 1 1 0 0 0
ATATGAACAAGTAGTCTGAGGTCCCG....................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
....................................................................................GGATGATGATGGACAGGAGCCAG...................................................... 23 0 1 1.00 1 0 0 1 0
.....................................................................................................................ACGTCAGCTCAGACACCACCTTCTTCATG............... 29 0 1 1.00 1 1 0 0 0
............................................................................CTACATGTGGATGATGATGTACAG............................................................. 24 1 2 0.50 1 1 0 0 0
.......................................................................CAGGACTACATGTGGATGATGATG.................................................................. 24 1 2 0.50 1 1 0 0 0
............................................................................CTACATGTGGATGATGATGG................................................................. 20 0 2 0.50 1 0 0 1 0
........................................................................ATGAGTACATGTGGATGATGATG.................................................................. 23 1 2 0.50 1 0 0 1 0
...........................................................................ACTACATGTGGATGATGATGG................................................................. 21 0 2 0.50 1 0 1 0 0
............................................................................CTACATGTGGATGATGATGGACAG............................................................. 24 0 2 0.50 1 0 0 1 0
.........................................................................TGAGTACATGTGGATGATGATTG................................................................. 23 2 2 0.50 1 0 1 0 0
................................................................................ATGTGGATGATGATGGACAGGAG.......................................................... 23 0 3 0.33 1 0 1 0 0
...............................................................................................................................AGACACCACCTTCTTCATG............... 19 0 3 0.33 1 0 1 0 0
.................................................................................TGTGGATGATGATGGACAGG............................................................ 20 0 3 0.33 1 1 0 0 0
..ATGCACAAGTGGTCTGAGG............................................................................................................................................ 19 2 4 0.25 1 0 0 1 0
.............................................................................TACATGTGGATGATGATGGACA.............................................................. 22 0 5 0.20 1 0 1 0 0
..............................................................................ACATGTGGATGATGATGGACA.............................................................. 21 0 5 0.20 1 1 0 0 0
...TGAACTAGTAGTATGAGG............................................................................................................................................ 18 2 13 0.15 2 0 2 0 0
.............................CCGCGGCAATAGGAAACAAA................................................................................................................ 20 3 8 0.13 1 0 0 1 0
..ATGAACTAGTAGTATGCGG............................................................................................................................................ 19 3 16 0.13 2 0 2 0 0
..ATGAACTAGTAGTATGAG............................................................................................................................................. 18 2 15 0.07 1 1 0 0 0
..ATGAACTAGCAGTATGAGG............................................................................................................................................ 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:9464589-9464749 + dan_79 TATACTTGTTCATCAGACTCCAGGGCTTTGCCGCCGTT---ATCCTTTATTGCGTGCTGAACGTGGCGGTGCATGTACTGATGTACACCTACTACTACCTGTCCTCGGTCAGCCAGGCGGTGCAGTCGAGTCTGTGGTGGAAGAAGTACATCACCATGGTCCAG
droBip1 scf7180000396580:1578574-1578734 - TATATTTGTTCATAAGGCTCCAAGGATTTGCTGCCGTTA---TCCTTTATTGCGTCTTGAACGTAGCTGTTCATGTACTGATGTACACCTACTACTATCTGTCCTCCGTCAGCAAGGCGGTGCAGTCGAGTCTTTGGTGGAAGAAGTACATCACCATGGCCCAG
droKik1 scf7180000302706:1857307-1857470 + GATACTTGTATCTCATTTTTAGTGGCTATGGAGGCCTCCTGTTCCCTGTGTGCCTTCTTAACGTTGCGGTGCACGTCATCATGTACACCTATTACTACCTATCCTCGGTCAGCCCCGAGGTGCAGGCCAGTCTCTGGTGGAAGAAGTACATCACCATCGTCCAG
droFic1 scf7180000454104:1208005-1208165 - GATACTTGTACCTCACCTACAGCGGCTATGGAGGAACTCTATTCCCATTGTGCCTGCTAAATGTGGCCGTCCATGTGATTATGTACACTTATTACTATTTATCGTGCGTCAGCAAGGACTTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAG
droEle1 scf7180000490967:1103171-1103331 - GATACATATACATTACGTACAGCGGCTATGGCGGCACATTGTTCCCGCTCTGCCTCCTGAACGTGGCCGTGCACGTGCTCATGTACTCCTACTACTACCTCTCCTCCGTCAGCAAGGATGTGCAGTCGAGTC---GGTGGAAAAAGTACATAACCATTGTCCAG
droRho1 scf7180000777865:418320-418480 + GATACATATACCTCACCTTCAGCGGGTATGGCGGCCCCTATTTCCCGTCTTGCCTCCTCAATGTGGCCGTGCATGTGCTCATGTACTCCTACTACTACATCTCTTCCGTCAACAAGGATGTGCAGTCGAGTT---CGTGGAAGAAGTACATCACCATTGTCCAG
droBia1 scf7180000302402:3121410-3121570 + GATACAGCCAAATCACCTTCAACGGATACGGCGGTACCTTGTTCCCACTGTGCCTCCTCAACGTGGCAGTGCACGTGATCATGTACTCCTACTACTACTTGTCCTCCGTCAACAAGGCTGTGCAGTCGAGTC---GGTGGAAGAAGTGCCTCACCATTGTCCAG
droTak1 scf7180000415653:694697-694860 + GTTATCTGTACTATTACTTCTTTGGATATGGCGGCATCGCGTTTCCACTGTGCTTTCTCAACGTGGCCGTCCATGTCGTCATGTACACCTACTATTACCTCTCCTCGATCAGCCTGGAAGTGCAGCAGAGTCTGTGGTGGAAGAAGTACATCACCCTCGTCCAG
droEug1 scf7180000407136:52393-52550 - TATACTATT------TCTTTGTCGGATATGGCGGCATTGCGTTCCCGCAGTGTTACCTAAACGTGATCATGCATGTGATCATGTACACCTACTATTACCTCTCTTCGATCAGTCCGGAAGTTCAGAAGAGTCTCTGGTGGAAGAAGTACATAACACTCACCCAA
dm3 chr3R:5639175-5639335 + GATACCTGCACATTACCTTCAACGGCTATGGAGGCACTCTGTTCCCATTATGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAG
droSim2 3r:15395167-15395327 - GATACCTGCACATCACCTTCAACGGCTACGGAGGCACTCTGTTCCCATTGTGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAG
droSec2 scaffold_0:16265386-16265545 - T-TACCTGCACATCACCTTCAACGGCTATGGAGGCACTCTCTTCCCATTGTGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAG
droYak3 3R:9686025-9686184 + T-TACATGCACATCACCTACAGCGGCTATGGCGGCATTCTCTTCCCATCGTGCCTGCTCAACGTGGCGGTCCACGTGATCATGTACTCCTACTACTACCTGTCCTCCGTCCGCAAGGATGTGCAGACCAGTC---GGTGGAAGAAGTACATCACCGTGGTCCAG
droEre2 scaffold_4770:15965893-15966053 - GCTACGTGAACATCACCTTCAACGGCTATGGAGGCGTTTTCTTCCCATCCTGCCTGCTCAACGTGGCGGTCCATGTGATCATGTACACCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGTCGAGCA---CGTGGAAAAAGTACATCACCATTGTCCAG
dp5 2:12442104-12442267 + GTTTCCTGTACATACGTTTCCACGGACACGGCGGCCATGGCTTCTTCCTCTGCTTCTTCAACGTCCTCGTGCACGTGCTCATGTACACCTACTACTACGTTTCCTCCGTACGCAGGGATGGCCAGGCAAAGGTCTGGTTCAAGCAGTACATCACCATCGTTCAG
droPer2 scaffold_0:8030075-8030238 - CCCACCTGCTGATCCGATTCTATGGCCATGGCGGCCATGTCTACTTCATCTGCATGTTCAATGTGCTGGTTCACATCGTGATGTACGGCTACTACTATGCCTCCTCCCAGAGCCGCAATCTCCAGGAGAGCCTCTGGTGGAAGAAGTACCTGACCCTCACCCAG
droWil2 scf2_1100000004510:2093212-2093375 - CCTATTTAACTATGCGAGTCAATGGCTATGGCGGCTTGCCGGTTACTGTGTCCACGGCCAACACTTTTGTTCATACCCTCATGTATGGCTACTACTATCTGGCATCACAGTATCCCAATTTAAGCAAAAGCCTGTGGTGGAAAAAATACATAACCATTTTGCAG
droVir3 scaffold_12855:8075133-8075296 + TCTACAGTGGACTGCGATTCTATGGCTATGGTGGACATTTTGTGCTGACGGGCTATCTGAATGTGTTTGTGCATTGCGTGATGTACATATACTATTACATATCGTCCCAGAGCCAGGCTGTGAAGCAGAGCCCCTGGTGGAAGCAGTACATCACCATCATACAG
droMoj3 scaffold_6540:23310291-23310454 + GATATTTCATAATCAGATTCATCGGCTTTGGGGGTCATCTTCTAGTAATGGGAGTCTTGAATGTCTTCGTGCACGTTATCATGTACAGCTACTACTACGCCGCGGCCCAGAGCTCGACTAAAAACAAGCTAATCTGGTGGAAGCAGTACATCACTATACTGCAG
droGri2 scaffold_15074:4675697-4675860 + GTTACTTTGTGATACGGTTCAATGGCTATGGAGGCCATCCAATTATCACGGGCCTTCTCAATCTCTTCGTACACGTTGTGATGTATAGCTACTACTATATCTCATCGCAGATACCGGCCATCAAGAGGAGACTCTGGTGGAAGCAGTACATTACCATGCTGCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TATACTTGTTCATCAGACTCCAGGGCTTTGCCGCCGTT---ATCCTTTATTGCGTGCTGAACGTGGCGGTGCATGTACTGATGTACACCTACTACTACCTGTCCTCGGTCAGCCAGGCGGTGCAGTCGAGTCTGTGGTGGAAGAAGTACATCACCATGGTCCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................TACTACTACCTGTCCTCGGTCAGC...................................................241182.00182683381000
........................................................................................CTACTACTACCTGTCCTCGGTCAGC...................................................251139.00139961429000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCC..................................................251106.0010629761000
.ATACTTGTTCATCAGACTCCAGGGC..........................................................................................................................................25181.0081223821000
...........................................................................................................................................GAAGAAGTACATCACCATGGTCCAG25172.007247196000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCA.................................................26166.00666150000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCAGG...............................................28163.00635742000
........TTCATCAGACTCCAGGGCTTTGCCGCC.................................................................................................................................27152.00527450000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCAG................................................27146.00464321000
..........................................TCCTTTATTGCGTGCTGAACGTGGCGG...............................................................................................27137.00373430000
.........................................................................................TACTACTACCTGTCCTCGGTCAG....................................................23136.00363240000
........................................................................................CTACTACTACCTGTCCTCGGTCAG....................................................24135.00353500000
.ATACTTGTTCATCAGACTCCAGGGCTT........................................................................................................................................27133.00332670000
.ATACTTGTTCATCAGACTCCAGGGCT.........................................................................................................................................26127.002714120010
........................................................................................CTACTACTACCTGTCCTCGGTCAGCCA.................................................27124.00242310000
TATACTTGTTCATCAGACTCCAGGGC..........................................................................................................................................26123.00231175000
.ATACTTGTTCATCAGACTCCAGGG...........................................................................................................................................24121.00211182000
..TACTTGTTCATCAGACTCCAGGGCTT........................................................................................................................................26120.00201460000
......TGTTCATCAGACTCCAGGGCTTTGC.....................................................................................................................................25118.00181260000
...........................................................................................................................................GAAGAAGTACATCACCATGGTCC..23117.00174130000
........................................................................................CTACTACTACCTGTCCTCGGTCAGCCAG................................................28116.00161600000
TATACTTGTTCATCAGACTCCAGGGCTT........................................................................................................................................28115.00151140000
........TTCATCAGACTCCAGGGCTTTGCC....................................................................................................................................24115.00152130000
..........................................TCCTTTATTGCGTGCTGAACGTGGC.................................................................................................25115.00151212000
........TTCATCAGACTCCAGGGCTTTGCCGCCGT...............................................................................................................................29114.0014950000
...........................................................................................................................................GAAGAAGTACATCACCATGGTCCA.24113.00131030000
...................................................................................TACACCTACTACTACCTGTCCTCGGT.......................................................26113.00131030000
........................................................................................CTACTACTACCTGTCCTCGGTCAGCC..................................................26113.0013850000
..TACTTGTTCATCAGACTCCAGGGCT.........................................................................................................................................25113.0013940000
..TACTTGTTCATCAGACTCCAGGGC..........................................................................................................................................24113.00131003000
........TTCATCAGACTCCAGGGCTTTGCCGCCG................................................................................................................................28113.00131030000
......TGTTCATCAGACTCCAGGGCTTTG......................................................................................................................................24111.00111100000
.........................................................................................TACTACTACCTGTCCTCGGTCA.....................................................22111.00111100000
.......GTTCATCAGACTCCAGGGCTTTGC.....................................................................................................................................24110.0010451000
.ATACTTGTTCATCAGACTCCAGGGCC.........................................................................................................................................2619.009090000
........................................................................................CTACTACTACCTGTCCTCGGTCA.....................................................2319.009900000
........TTCATCAGACTCCAGGGCTTTGCCGC..................................................................................................................................2618.008710000
.........TCATCAGACTCCAGGGCTTTGCCGCCGT...............................................................................................................................2818.008701000
.....TTGTTCATCAGACTCCAGGGCTTTG......................................................................................................................................2518.008800000
..........................................TCCTTTATTGCGTGCTGAACGTGGCG................................................................................................2618.008800000
...................................................................................TACACCTACTACTACCTGTCCTCGGTCA.....................................................2818.008710000
.................................................................................................................CAGGCGGTGCAGTCGAGTCTGTGG...........................2417.007340000
........TTCATCAGACTCCAGGGCTTTGCCG...................................................................................................................................2517.007520000
.........TCATCAGACTCCAGGGCTTTGCCGCCG................................................................................................................................2717.007700000
........................................................................................CTACTACTACCTGTCCTCGGTCAGCCAGG...............................................2917.007700000
............................................................................................TACTACCTGTCCTCGGTCAGCCAGG...............................................2516.006312000
.......GTTCATCAGACTCCAGGGCTTTGCC....................................................................................................................................2516.006150000
......TGTTCATCAGACTCCAGGGCTTTGCCGCC.................................................................................................................................2916.006330000
...........................................................................................CTACTACCTGTCCTCGGTCAGCCAGG...............................................2616.006411000
.......GTTCATCAGACTCCAGGGCTTTG......................................................................................................................................2315.005500000
...................................................................................TACACCTACTACTACCTGTCCTCGG........................................................2515.005500000
..........CATCAGACTCCAGGGCTTTGCCGCC.................................................................................................................................2515.005140000
.....TTGTTCATCAGACTCCAGGGCTTT.......................................................................................................................................2414.004220000
.ATACTTGTTCATCAGACTCCAGG............................................................................................................................................2314.004121000
TATACTTGTTCATCAGACTCCAGGG...........................................................................................................................................2514.004400000
..........................................TCCTTTATTGCGTGCTGAACGTG...................................................................................................2314.004400000
.....................................T---ATCCTTTATTGCGTGCTGAACGTGGC.................................................................................................2714.004400000
..........................................TCCTTTATTGCGTGCTGAACGTGG..................................................................................................2414.004400000
.....................................T---ATCCTTTATTGCGTGCTGAACGTG...................................................................................................2514.004310000
........TTCATCAGACTCCAGGGCTTTGC.....................................................................................................................................2314.004220000
......TGTTCATCAGACTCCAGGGCTTTGCC....................................................................................................................................2614.004220000
........................................................................................CTACTACTACCTGTCCTCGGTC......................................................2214.004400000
TATACTTGTTCATCAGACTCCAGGGCT.........................................................................................................................................2714.004220000
....................................TT---ATCCTTTATTGCGTGCTGAACGTG...................................................................................................2614.004211000
.........TCATCAGACTCCAGGGCTTTGCCGCC.................................................................................................................................2614.004130000
TATACTTGTTCATCAGACTCCAGG............................................................................................................................................2414.004301000
...........................................................................................................................................GAAGAAGTACATCACCATGGTC...2214.004220000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCAGGC..............................................2914.004400000
.........................................................TGAACGTGGCGGTGCATGTACTGATG.................................................................................2614.004310000
.....................................T---ATCCTTTATTGCGTGCTGAACGTGG..................................................................................................2613.003210000
..TACTTGTTCATCAGACTCCAGG............................................................................................................................................2213.003300000
.....................................T---ATCCTTTATTGCGTGCTGAACGTGGCGG...............................................................................................2913.003300000
....................................TT---ATCCTTTATTGCGTGCTGAACGTGG..................................................................................................2713.003210000
.............................................................................................................CAGCCAGGCGGTGCAGTCGAGTCT...............................2413.003210000
.....................................................................................CACCTACTACTACCTGTCCTCGGTCAGC...................................................2813.003300000
...........................................................................TACTGATGTACACCTACTACTACCTG...............................................................2613.003300000
.......................................................................................CCTACTACTACCTGTCCTCGGTCAGC...................................................2613.003210000
.....TTGTTCATCAGACTCCAGGGCTTTGCC....................................................................................................................................2713.003120000
...................................................................................................TGTCCTCGGTCAGCCAGGCGGTGCA........................................2513.003300000
.........................................................................................................................................TGGAAGAAGTACATCACCATGGTCC..2513.003210000
..........................................................................................ACTACTACCTGTCCTCGGTCAGCCAGG...............................................2713.003300000
.........................................................TGAACGTGGCGGTGCATGTACTGATGTA...............................................................................2813.003300000
...........................................................................TACTGATGTACACCTACTACTACCTGTCC............................................................2913.003210000
...........................................CCTTTATTGCGTGCTGAACGTGGC.................................................................................................2413.003300000
..................TCCAGGGCTTTGCCGCCGTT---ATCC.......................................................................................................................2413.003120000
...................................................................................TACACCTACTACTACCTGTCCTCGGTC......................................................2713.003030000
..........................TTTGCCGCCGTT---ATCCTTTATTGC...............................................................................................................2413.003030000
....................................................................................ACACCTACTACTACCTGTCCTCGGTCA.....................................................2713.003120000
..........................................................................................ACTACTACCTGTCCTCGGTCAG....................................................2213.003300000
...............................................................TGGCGGTGCATGTACTGATGTACACC...........................................................................2613.003120000
................................GCCGTT---ATCCTTTATTGCGTGCTGAACG.....................................................................................................2813.003300000
....................................................................................ACACCTACTACTACCTGTCCTCGGTC......................................................2613.003030000
............................................................................................................................................AAGAAGTACATCACCATGGTCCAG2413.003210000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCAGT...............................................2813.003300000
......TGTTCATCAGACTCCAGGGCTTTGCCGC..................................................................................................................................2813.003300000
......................................................................................ACCTACTACTACCTGTCCTCGGTCAGC...................................................2713.003300000
.ATACTTGTTCATCAGACTCCAGGGCTTTG......................................................................................................................................2912.002200000
...................................................................................................TGTCCTCGGTCAGCCAGGCGGTGCAGTC.....................................2812.002200000
.........................................................................................TACTACTACCTGTCCTCGGTC......................................................2112.002110000
.................................................................................TGTACACCTACTACTACCTGTCCTCGG........................................................2712.002200000
..................................CGTT---ATCCTTTATTGCGTGCTGAACG.....................................................................................................2612.002200000
.......GTTCATCAGACTCCAGGGCTTTGCCG...................................................................................................................................2612.002110000
...........................................................................................................................................GAAGAAGTACATCACCATGGTCCAT2512.002110000
............................................................................................TACTACCTGTCCTCGGTCAGCCAGGCGG............................................2812.002200000
.........................................ATCCTTTATTGCGTGCTGAACGTGG..................................................................................................2512.002200000
..TACTTGTTCATCAGACTCCAGGG...........................................................................................................................................2312.002200000
.................................................................................TGTACACCTACTACTACCTGTCCTCGGT.......................................................2812.002200000
.............................................................................................................CAGCCAGGCGGTGCAGTCGAGTC................................2312.002200000
.........................................................................................TACTACTACCTGTCCTCGG........................................................1912.002200000
....CTTGTTCATCAGACTCCAGGGCTT........................................................................................................................................2412.002110000
...............................................TATTGCGTGCTGAACGTGGCGG...............................................................................................2212.002200000
.....TTGTTCATCAGACTCCAGGGCT.........................................................................................................................................2212.002110000
.ATACTTGTTCATCAGACTCCAGGGCTTT.......................................................................................................................................2812.002200000
...................................GTT---ATCCTTTATTGCGTGCTGAACGTGG..................................................................................................2812.002200000
.........................................................................TGTACTGATGTACACCTACTACTACC.................................................................2612.002020000
.................................................................................................................CAGGCGGTGCAGTCGAGTCTGTG............................2312.002110000
...................................................................................................................GGCGGTGCAGTCGAGTCTGTGG...........................2212.002200000
.........................................ATCCTTTATTGCGTGCTGAACGTGGCGG...............................................................................................2812.002200000
.......GTTCATCAGACTCCAGGGCTTTGCCGC..................................................................................................................................2712.002110000
..........................................................GAACGTGGCGGTGCATGTACTGATG.................................................................................2512.002200000
....................................................................................ACACCTACTACTACCTGTCCTCGGT.......................................................2512.002200000
..............................................................................................................AGCCAGGCGGTGCAGTCGAGTCT...............................2312.002200000
..............................................................................................................AGCCAGGCGGTGCAGTCGAGTC................................2212.002200000
..............................................................................................................AGCCAGGCGGTGCAGTCGAGTCTG..............................2412.002200000
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCAT................................................2712.002200000
............TCAGACTCCAGGGCTTTGCCGCC.................................................................................................................................2312.002020000
TATACTTGTTCATCAGACTCCAGGGCC.........................................................................................................................................2712.002020000
..........................................................................................ACTACTACCTGTCCTCGGTCAGCCA.................................................2512.002110000
............................TGCCGCCGTT---ATCCTTTATTGCGTGC...........................................................................................................2612.002002000
........................................................................................................................TGCAGTCGAGTCTGTGGTGGAAG.....................2312.002020000
............TCAGACTCCAGGGCTTTGCCGCCGTT---...........................................................................................................................2612.002200000
..........................................................................................ACTACTACCTGTCCTCGGTCAGC...................................................2312.002200000
.....TTGTTCATCAGACTCCAGGGCTTTGC.....................................................................................................................................2612.002200000
.................................................TTGCGTGCTGAACGTGGCGGTGC............................................................................................2312.002020000
..........CATCAGACTCCAGGGCTTTGCCGCCGT...............................................................................................................................2712.002101000
......................................................................GCATGTACTGATGTACACCTACTAC.....................................................................2511.001100000
.............................................TTTATTGCGTGCTGAACGTGGCGG...............................................................................................2411.001010000
......TGTTCATCAGACTCCAGGGCTTTGCCG...................................................................................................................................2711.001100000
.................................................TTGCGTGCTGAACGTGGCGGT..............................................................................................2111.001000010
............TCAGACTCCAGGGCTTTGCCGCCGTT---A..........................................................................................................................2711.001100000
.........................................................................................TACTACTACCTGTCCTCGGTCG.....................................................2211.001100000
.......................................................................................................................GTGCAGTCGAGTCTGTGGTGGAAGAAA..................2711.001010000
...........ATCAGACTCCAGGGCTTTGCCGCC.................................................................................................................................2411.001100000
......TGTTCATCAGACTCCAGGGCTT........................................................................................................................................2211.001010000
...............................................................................................................GCCAGGCGGTGCAGTCGAGTCTGTGGT..........................2711.001100000
.........TCATCAGACTCCAGGGCTTTGCCGC..................................................................................................................................2511.001010000
........................................................................................................................TGCAGTCGAGTCTGTGGTGGAAGAAG..................2611.001000010
.....................................................................................CACCTACTACTACCTGTCCTCGGTCA.....................................................2611.001100000
.....................................................................................................TCCTCGGTCAGCCAGGCGGTGCAGTCGA...................................2811.001100000
....................................TT---ATCCTTTATTGCGTGCTGAACG.....................................................................................................2411.001010000
...................................GTT---ATCCTTTATTGCGTGCTGAACGTG...................................................................................................2711.001100000
.....................................................................................................TCCTCGGTCAGCCAGGCGGTGCAGTC.....................................2611.001010000
....................................................................................................................GCGGTGCAGTCGAGTCTGTGG...........................2111.001000010
................................GCCGTT---ATCCTTTATTGCGTGCTG.........................................................................................................2411.001100000
...............................................................................................TACCTGTCCTCGGTCAGCCAGG...............................................2211.001100000
.............................................................................................................CAGCCAGGCGGTGCAGTCGAG..................................2111.001010000
.....................................................................................................TCCTCGGTCAGCCAGGCGGTGC.........................................2211.001000001
.........................................................................................TACTACTACCTGTCCTCGGTCAGCCATT...............................................2811.001100000
...........................................................................................................................................GAAGAAGTACATCACCATGGTCCAA2511.001010000
.....................................................................................CACCTACTACTACCTGTCCTCGGTCAG....................................................2711.001100000
.............................................TTTATTGCGTGCTGAACGTGGCGGT..............................................................................................2511.001100000
..............................................................................................................AGCCAGGCGGTGCAGTCGAGTCTGTG............................2611.001100000
........................................................................................................................TGCAGTCGAGTCTGTGGTGGAAGAT...................2511.001010000
..................................................TGCGTGCTGAACGTGGCGGTGCATG.........................................................................................2511.001100000
.....................................................................................................TCCTCGGTCAGCCAGGCGGTGCA........................................2311.001100000
........................................................................................CTACTACTACCTGTCCTCGGTCAGCA..................................................2611.001010000
.......................................................GCTGAACGTGGCGGTGCA...........................................................................................1811.001100000
.................................CCGTT---ATCCTTTATTGCGTGCTGAACGTG...................................................................................................2911.001100000
...........................................CCTTTATTGCGTGCTGAACGTGGCG................................................................................................2511.001100000
......................................................................................ACCTACTACTACCTGTCCTCGGTCA.....................................................2511.001100000
............................................................................................................................................AAGAAGTACATCACCATGGTCCA.2311.001100000
..............................................................................................CTACCTGTCCTCGGTCAG....................................................1811.001100000
.ATACTTGTTCATCAGACTCCAG.............................................................................................................................................2211.001010000
..............................................TTATTGCGTGCTGAACGTGGCGG...............................................................................................2311.001100000
.............................................................................CTGATGTACACCTACTACTACCTGTCC............................................................2711.001100000
..........CATCAGACTCCAGGGCTTTGCCGC..................................................................................................................................2411.001010000
......................................................................................................CCTCGGTCAGCCAGGCGGT...........................................1911.001100000
......TGTTCATCAGACTCCAGGGCT.........................................................................................................................................2111.001000010
.......................................................................................CCTACTACTACCTGTCCTCGGTCAGCC..................................................2711.001100000
........TTCATCAGACTCCAGGGCTTTG......................................................................................................................................2211.001100000
...ACTTGTTCATCAGACTCCAGGG...........................................................................................................................................2211.001010000
..TACTTGTTCATCAGACTCCAGGGCC.........................................................................................................................................2511.001010000
.............CAGACTCCAGGGCTTTGCCGCCGT...............................................................................................................................2411.001001000
........................................................................................................TCGGTCAGCCAGGCGGTGCAGTC.....................................2311.001010000
.....TTGTTCATCAGACTCCAGGGCTT........................................................................................................................................2311.001010000
............................................................................................................TCAGCCAGGCGGTGCAGTCGAGTCTG..............................2611.001100000
...............................................................................................TACCTGTCCTCGGTCAGCC..................................................1911.001010000
.............................................................CGTGGCGGTGCATGTACTGATGTA...............................................................................2411.001100000
..........................................................................................................................................GGAAGAAGTACATCACCATGGTCCA.2511.001100000
...........................................................................................................................................GAAGAAGTACATCACCATGGT....2111.001100000
..............................................................................TGATGTACACCTACTACTACCTGTCC............................................................2611.001100000
................................GCCGTT---ATCCTTTATTGCGTGCTGAA.......................................................................................................2611.001100000
...............................................................................................TACCTGTCCTCGGTCAGCCAGGCG.............................................2411.001100000
.....................................................................................................................CGGTGCAGTCGAGTCTGTGG...........................2011.001000010
.....................................................GTGCTGAACGTGGCGGTGCA...........................................................................................2011.001000010
..............................................................................................................AGCCAGGCGGTGCAGTCGAGTCTGT.............................2511.001100000
...........................................................................................CTACTACCTGTCCTCGGTCAGCCAGGCGG............................................2911.001010000
.....................................................................................................TCCTCGGTCAGCCAGGCGG............................................1911.001100000
droBip1
TATATTTGTTCATAAGGCTCCAAGGATTTGCTGCCGTTA---TCCTTTATTGCGTCTTGAACGTAGCTGTTCATGTACTGATGTACACCTACTACTATCTGTCCTCCGTCAGCAAGGCGGTGCAGTCGAGTCTTTGGTGGAAGAAGTACATCACCATGGCCCAGSizeHit CountTotal NormTotal
No Reads
droKik1
GATACTTGTATCTCATTTTTAGTGGCTATGGAGGCCTCCTGTTCCCTGTGTGCCTTCTTAACGTTGCGGTGCACGTCATCATGTACACCTATTACTACCTATCCTCGGTCAGCCCCGAGGTGCAGGCCAGTCTCTGGTGGAAGAAGTACATCACCATCGTCCAGSizeHit CountTotal NormTotal
No Reads
droFic1
GATACTTGTACCTCACCTACAGCGGCTATGGAGGAACTCTATTCCCATTGTGCCTGCTAAATGTGGCCGTCCATGTGATTATGTACACTTATTACTATTTATCGTGCGTCAGCAAGGACTTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAGSizeHit CountTotal NormTotal
No Reads
droEle1
GATACATATACATTACGTACAGCGGCTATGGCGGCACATTGTTCCCGCTCTGCCTCCTGAACGTGGCCGTGCACGTGCTCATGTACTCCTACTACTACCTCTCCTCCGTCAGCAAGGATGTGCAGTCGAGTC---GGTGGAAAAAGTACATAACCATTGTCCAGSizeHit CountTotal NormTotal
No Reads
droRho1
GATACATATACCTCACCTTCAGCGGGTATGGCGGCCCCTATTTCCCGTCTTGCCTCCTCAATGTGGCCGTGCATGTGCTCATGTACTCCTACTACTACATCTCTTCCGTCAACAAGGATGTGCAGTCGAGTT---CGTGGAAGAAGTACATCACCATTGTCCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GATACAGCCAAATCACCTTCAACGGATACGGCGGTACCTTGTTCCCACTGTGCCTCCTCAACGTGGCAGTGCACGTGATCATGTACTCCTACTACTACTTGTCCTCCGTCAACAAGGCTGTGCAGTCGAGTC---GGTGGAAGAAGTGCCTCACCATTGTCCAGSizeHit CountTotal NormTotal
No Reads
droTak1
GTTATCTGTACTATTACTTCTTTGGATATGGCGGCATCGCGTTTCCACTGTGCTTTCTCAACGTGGCCGTCCATGTCGTCATGTACACCTACTATTACCTCTCCTCGATCAGCCTGGAAGTGCAGCAGAGTCTGTGGTGGAAGAAGTACATCACCCTCGTCCAGSizeHit CountTotal NormTotal
No Reads
droEug1
TATACTATT------TCTTTGTCGGATATGGCGGCATTGCGTTCCCGCAGTGTTACCTAAACGTGATCATGCATGTGATCATGTACACCTACTATTACCTCTCTTCGATCAGTCCGGAAGTTCAGAAGAGTCTCTGGTGGAAGAAGTACATAACACTCACCCAASizeHit CountTotal NormTotal
No Reads
dm3
GATACCTGCACATTACCTTCAACGGCTATGGAGGCACTCTGTTCCCATTATGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................TGTGCAGACGAGTC---GGTGGA.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................ACTACCTGTCCTCCGTCAGCA..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TGCAGACGAGTC---GGTGGAAGT....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................ATGTGCAGACGAGTC---GGTGG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................TCCATGTGATCATGTACGCCT..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TACTACCTGTCCTCCGTCAGCAAGGATG............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................TGGCGGTCCATGTGATCATGTA...............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
droSim2
GATACCTGCACATCACCTTCAACGGCTACGGAGGCACTCTGTTCCCATTGTGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................CAGACGAGTC---GGTGGAAGA....................1911.00100000010000000000
droSec2
T-TACCTGCACATCACCTTCAACGGCTATGGAGGCACTCTCTTCCCATTGTGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGACGAGTC---GGTGGAAGAAGTACATCACCATTGTCCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................ACGAGTC---GGTGGAAGAAGTA................2011.0011000
.....................................................................................................................ATGTGCAGACGAGTC---GGTGGA.......................2111.0010100
......................................................................................................................TGTGCAGACGAGTC---GGTGGA.......................2011.0010100
...........................................................................TGATCATGTACGCCTACTACT....................................................................2111.0011000
.....................................................................................................................ATGTGCAGACGAGTC---GGTGG........................2011.0010100
........................................................................................CTACTACTACCTGTCCTCCG........................................................2011.0011000
...........................................................................................................................................GAAGAAGTACATCACCATTGT....2111.0010100
.................................................................................................................AAGGATGTGCAGACGAGTC---GGT..........................2211.0010010
.............................................................................................ACTACCTGTCCTCCGTCAGCA..................................................2111.0011000
......TGCACATCACCTTCAACGGCTT........................................................................................................................................2211.0011000
.........................CTATGGAGGCACTCTCTTCCC......................................................................................................................2111.0011000
........................................................................................CTACTACTACCTGTCCTCCGT.......................................................2111.0010100
droYak3
T-TACATGCACATCACCTACAGCGGCTATGGCGGCATTCTCTTCCCATCGTGCCTGCTCAACGTGGCGGTCCACGTGATCATGTACTCCTACTACTACCTGTCCTCCGTCCGCAAGGATGTGCAGACCAGTC---GGTGGAAGAAGTACATCACCGTGGTCCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GCTACGTGAACATCACCTTCAACGGCTATGGAGGCGTTTTCTTCCCATCCTGCCTGCTCAACGTGGCGGTCCATGTGATCATGTACACCTACTACTACCTGTCCTCCGTCAGCAAGGATGTGCAGTCGAGCA---CGTGGAAAAAGTACATCACCATTGTCCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................CCATCCTGCCTGCTCAACGTG...................................................................................................2111.0011000000
...........................................................................TGATCATGTACACCTACTACTACC.................................................................2411.0011000000
dp5
GTTTCCTGTACATACGTTTCCACGGACACGGCGGCCATGGCTTCTTCCTCTGCTTCTTCAACGTCCTCGTGCACGTGCTCATGTACACCTACTACTACGTTTCCTCCGTACGCAGGGATGGCCAGGCAAAGGTCTGGTTCAAGCAGTACATCACCATCGTTCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................CTCGTGCACGTGCTCATGTA...............................................................................2011.0010000001000
...........................................................................................................GTACGCAGGGATGGCCAGG......................................1911.0010000001000
......................CGGACACGGCGGCCATGGC...........................................................................................................................1911.0010100000000
droPer2
CCCACCTGCTGATCCGATTCTATGGCCATGGCGGCCATGTCTACTTCATCTGCATGTTCAATGTGCTGGTTCACATCGTGATGTACGGCTACTACTATGCCTCCTCCCAGAGCCGCAATCTCCAGGAGAGCCTCTGGTGGAAGAAGTACCTGACCCTCACCCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................GTTCACATCGTGATGTACGGC...........................................................................2111.001000001
...............................................................................................................GCCGCAATCTCCAGGAGAGCC................................2111.001000001
droWil2
CCTATTTAACTATGCGAGTCAATGGCTATGGCGGCTTGCCGGTTACTGTGTCCACGGCCAACACTTTTGTTCATACCCTCATGTATGGCTACTACTATCTGGCATCACAGTATCCCAATTTAAGCAAAAGCCTGTGGTGGAAAAAATACATAACCATTTTGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TCTACAGTGGACTGCGATTCTATGGCTATGGTGGACATTTTGTGCTGACGGGCTATCTGAATGTGTTTGTGCATTGCGTGATGTACATATACTATTACATATCGTCCCAGAGCCAGGCTGTGAAGCAGAGCCCCTGGTGGAAGCAGTACATCACCATCATACAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GATATTTCATAATCAGATTCATCGGCTTTGGGGGTCATCTTCTAGTAATGGGAGTCTTGAATGTCTTCGTGCACGTTATCATGTACAGCTACTACTACGCCGCGGCCCAGAGCTCGACTAAAAACAAGCTAATCTGGTGGAAGCAGTACATCACTATACTGCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GTTACTTTGTGATACGGTTCAATGGCTATGGAGGCCATCCAATTATCACGGGCCTTCTCAATCTCTTCGTACACGTTGTGATGTATAGCTACTACTATATCTCATCGCAGATACCGGCCATCAAGAGGAGACTCTGGTGGAAGCAGTACATTACCATGCTGCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/15/2015 at 02:34 PM