ID:

dan_735

 Coordinate:

scaffold_12916:15268850-15269000 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.6 -31.8 -31.8

Flybase annnotation

exon [dana_GLEANR_16615:1]; CDS [Dana\GF15854-cds]; intron [Dana\GF15854-in]

No Repeatable elements found

mature
  1. scaffold_9234:4098-4124 +
  2. scaffold_12586:163502-163528 -
  3. scaffold_12905:348562-348588 -
  4. scaffold_12911:1431296-1431322 +
  5. dan_735  scaffold_12916:15268946-15268972 +
  6. scaffold_12935:36428-36454 +
  7. scaffold_12966:167250-167276 -
  8. scaffold_12984:45190-45216 +
  9. scaffold_13034:880791-880817 -
  10. scaffold_13137:1214786-1214812 +
  11. scaffold_13137:1216718-1216744 -
  12. scaffold_13174:75115-75141 +
  13. scaffold_13195:4057-4083 -
  14. scaffold_13248:2329429-2329455 -
  15. scaffold_13258:697603-697629 +
  16. scaffold_13266:7741472-7741498 +
  17. scaffold_13280:588445-588471 -
  18. scaffold_13334:263461-263487 +
  19. scaffold_13334:1006399-1006425 +
  20. scaffold_13337:8198141-8198167 -
star
  1. scaffold_12911:1431228-1431254 +
  2. dan_735  scaffold_12916:15268878-15268904 +
  3. scaffold_12984:45122-45148 +
  4. scaffold_13137:1214718-1214744 +
  5. scaffold_13248:2329497-2329523 -
  6. scaffold_13266:7741404-7741430 +
  7. scaffold_13334:263393-263419 +
  8. scaffold_13334:1006331-1006357 +
  9. scaffold_13337:8198209-8198235 -

Sense Strand Reads

---------------------------------#################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTGTAGTTGCAACATCATAATTGCAACGCATAATGACCCTGCAGTTCCAGTGTTGAGGAGTTCCTTGTGGAACTCTCCATTACCTGCTCACCATGCATTAGGAATTCCCCAGTGCTGGTATATGAAATTCGTTAAGGAATTTTTGTATGGGATGTCCTATGCATCGGTGACCTGGGGAATTTTCTCCCTAACTGGTTAGGGAATTTCCCCAGGAATACCTGCAAAGAAATCCTAGGGAAGGTATTTGGTA
******************************************************************************..........(((((((((((.((((..((((........(((((.(((((((......))))))))))))))))..)))))))))).)))))..****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V106
head
 V055
head
 V105
male body
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTGACC.............................................................................. 27 0 20 7.90 158 146 7 5 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGACC.............................................................................. 25 0 20 4.05 81 72 6 3 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTGAC............................................................................... 26 0 20 0.95 19 15 4 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGTG..................................................................................................................................................................................... 24 0 18 0.78 14 1 1 9 3 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTGA................................................................................ 25 0 20 0.65 13 3 1 8 0 0 1
...................................................................................................................................................ATGGGATGTCCTATGCATCGGTGACC.............................................................................. 26 0 20 0.65 13 10 2 1 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGTGG.................................................................................................................................................................................... 25 0 18 0.50 9 2 4 1 2 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTGGG.......................................................................... 24 0 19 0.47 9 2 7 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCT............................................................................. 26 0 20 0.40 8 4 3 1 0 0 0
................................................................................................................................................TGTATGGGATGTCCTATGCATCGGT.................................................................................. 25 0 20 0.35 7 6 1 0 0 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTGG........................................................................... 23 0 20 0.35 7 0 7 0 0 0 0
..............................................................................CATTACCTGCTCACCATGCATTAGGAA.................................................................................................................................................. 27 0 9 0.33 3 0 1 0 2 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTGGGGA........................................................................ 26 0 18 0.28 5 0 5 0 0 0 0
................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTGACC.............................................................................. 29 0 19 0.26 5 5 0 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTG................................................................................. 24 0 20 0.25 5 1 2 2 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCTG............................................................................ 27 0 20 0.25 5 0 4 1 0 0 0
......................................................................................................................GTATATGAAATTCGTTAAGGAATTT............................................................................................................ 25 0 13 0.23 3 1 0 1 1 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGGGA........................................................................ 24 0 18 0.22 4 1 3 0 0 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGGG......................................................................... 23 0 18 0.22 4 0 4 0 0 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTGGGG......................................................................... 25 0 18 0.22 4 0 4 0 0 0 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTGGGGA........................................................................ 25 0 18 0.22 4 1 3 0 0 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTGGGGAA....................................................................... 27 0 18 0.22 4 0 4 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCTGG........................................................................... 28 0 19 0.21 4 0 4 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAATT..................................................................... 24 0 20 0.20 4 0 4 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGAC............................................................................... 24 0 20 0.20 4 2 2 0 0 0 0
........................................TGCAGTTCCAGTGTTGAGGAGTTC........................................................................................................................................................................................... 24 0 15 0.20 3 2 1 0 0 0 0
..................................................................................................................................................TACGGGATGTCCTATGCATCGGTGACC.............................................................................. 27 1 20 0.20 4 4 0 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGTGGAA.................................................................................................................................................................................. 27 0 18 0.17 3 1 0 1 0 0 1
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAAT...................................................................... 26 0 18 0.17 3 1 2 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTG....................................................................................................................................................................................... 22 0 18 0.17 3 0 1 2 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAATTTTC.................................................................. 27 0 19 0.16 3 1 2 0 0 0 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTGGG.......................................................................... 23 0 19 0.16 3 1 2 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAATTTT................................................................... 26 0 19 0.16 3 0 2 0 1 0 0
..............................................TGCAGTGTTGAGGAGTTCCTTGTGG.................................................................................................................................................................................... 25 1 20 0.15 3 3 0 0 0 0 0
..........................................................................................................TCCCCAGTGCTGGTATATGAAATTCGTT..................................................................................................................... 28 0 20 0.15 3 0 2 1 0 0 0
................................................................................................................................................TGTATGGGATGTCCTATGCATCGGC.................................................................................. 25 1 20 0.15 3 3 0 0 0 0 0
...............................................CCAGTGTTGAGGAGTTCCTTGTGGAAC................................................................................................................................................................................. 27 0 20 0.15 3 1 1 0 0 0 1
..................................................................................................................................................................CATCGGTGACCTGGGGAATTTTCTCC............................................................... 26 0 20 0.15 3 2 1 0 0 0 0
....................................................................................................................................................TTGGATGTCCTATGCATCGGTGACCT............................................................................. 26 1 20 0.15 3 3 0 0 0 0 0
..................................................................................................................................................TATTGGATGTCCTATGCATCGGTGACC.............................................................................. 27 1 20 0.15 3 3 0 0 0 0 0
................................................................................................................................................................TGCATCGGTGACCTGGGGAATTTTC.................................................................. 25 0 20 0.15 3 3 0 0 0 0 0
..................................................................................................................................................TGTGGGATGTCCTATGCATCGGTGACC.............................................................................. 27 1 20 0.15 3 3 0 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATATGAAATTCGC...................................................................................................................... 28 1 20 0.15 3 3 0 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATATGAAATTCGTT..................................................................................................................... 29 0 20 0.15 3 1 2 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTGACCT............................................................................. 28 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................................................................................TTTCCTATGCATCGGTGACCTGGG.......................................................................... 24 1 20 0.15 3 3 0 0 0 0 0
....................................ACCCTGCAGTTCCAGTGTTGAGGAG.............................................................................................................................................................................................. 25 0 7 0.14 1 0 1 0 0 0 0
....................................ACCCTGCAGTTCCACTGTTGAGGAG.............................................................................................................................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0
........................................TGCAGTTCCAGTGTTGAGGAGTTCC.......................................................................................................................................................................................... 25 0 15 0.13 2 1 1 0 0 0 0
.................ATGGTTGCAACGCATAACG....................................................................................................................................................................................................................... 19 3 16 0.13 2 0 0 0 0 2 0
..........................................CAGTTCCAGTGTTGAGGAGTTCC.......................................................................................................................................................................................... 23 0 17 0.12 2 1 1 0 0 0 0
........................................................................................TCACCATGCATTAGGAATTCCCCAGT......................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAA....................................................................... 25 0 18 0.11 2 0 2 0 0 0 0
.............................................................................................ATGAATTAGGAATTCCCCGG.......................................................................................................................................... 20 2 9 0.11 1 0 0 0 0 1 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTGGGG......................................................................... 24 0 18 0.11 2 0 2 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGTGGA................................................................................................................................................................................... 26 0 18 0.11 2 1 1 0 0 0 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTGGGGAA....................................................................... 26 0 18 0.11 2 0 2 0 0 0 0
...........................................................................................................................................................................................................................CTGCAAAGAAATCCTAGGGAAGG......... 23 0 19 0.11 2 1 0 0 0 0 1
....................................................................................................................................................TTGGATGTCCTATGCATCGGTGACCTGG........................................................................... 28 1 19 0.11 2 2 0 0 0 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGG.......................................................................... 22 0 19 0.11 2 0 2 0 0 0 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTGG........................................................................... 22 0 20 0.10 2 0 2 0 0 0 0
......................................................................................................................................................GGATGTCCTATGCATCGGTGACC.............................................................................. 23 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................TGCATCGGTGACCTGGGGA........................................................................ 19 0 20 0.10 2 1 1 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGT.................................................................................. 23 0 20 0.10 2 1 1 0 0 0 0
...................................................TGTTGAGGAGTTCCTTGTGGAACTC............................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
...............................................CCAGTGTTGAGGAGTTCCTTGTGG.................................................................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................................................................................CATCGGTGACCTGGGGAATTTTCTC................................................................ 25 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATTGGTGACC.............................................................................. 27 1 20 0.10 2 2 0 0 0 0 0
................................................CAGTGTTGAGGAGTTCCTTGTGGAAC................................................................................................................................................................................. 26 0 20 0.10 2 1 1 0 0 0 0
....................................................................................................................................................TTGGATGTCCTATGCATCGGTGACCC............................................................................. 26 2 20 0.10 2 2 0 0 0 0 0
....................................................................................................................................................TTGGATGTCCTATGCATCGGTGAC............................................................................... 24 1 20 0.10 2 2 0 0 0 0 0
..........................................................................................................TCCCCAGTGCTGGTATATGAAATTCGT...................................................................................................................... 27 0 20 0.10 2 1 1 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGG......................................................................... 20 0 20 0.10 2 0 2 0 0 0 0
......................................CCTGCAGTTCCAGTGTTGAGGAGT............................................................................................................................................................................................. 24 0 13 0.08 1 1 0 0 0 0 0
....................................................................................................................TTGTATATGAAATTCGTTAAGGAAT.............................................................................................................. 25 1 13 0.08 1 1 0 0 0 0 0
......................................CCTGCAGTTCCAGTGTTGAGGAGTTCC.......................................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0
.......................................CTGCAGTTCCAGTGTTGAGGAGTTC........................................................................................................................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0
........................................TGCAGTTCCAGTGTTGAGGAGT............................................................................................................................................................................................. 22 0 15 0.07 1 0 1 0 0 0 0
........................................TGCAGTTCCAGTGTTGAGG................................................................................................................................................................................................ 19 0 15 0.07 1 0 0 1 0 0 0
........................................TGCAGTTCCAGTGTTGAGGAGTTCCTTGT...................................................................................................................................................................................... 29 0 15 0.07 1 0 1 0 0 0 0
........................................TGCAGTTCCAGTGTTGACGAG.............................................................................................................................................................................................. 21 1 15 0.07 1 0 0 1 0 0 0
........................................TGCAGTTCCAGTGTTGAGGAGTTCCTT........................................................................................................................................................................................ 27 0 15 0.07 1 0 1 0 0 0 0
........................................TGCAGTTCCAGTGTTGAGGAGTTCCT......................................................................................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0
........................................TGCAGTTCCAGTGTTGAGCAGTTCTTTG....................................................................................................................................................................................... 28 2 16 0.06 1 0 0 0 0 1 0
..........................................CAGTTCCAGTGTTGAGGAGTTCCT......................................................................................................................................................................................... 24 0 17 0.06 1 0 1 0 0 0 0
.................................................................................................................................................................................................TGGTTAGGGAATTTCCCCAGGAAT.................................. 24 0 17 0.06 1 1 0 0 0 0 0
.............................................TTCCAGTGTTGAGGAGTTCCTTG....................................................................................................................................................................................... 23 0 17 0.06 1 0 1 0 0 0 0
.............................................TTCCAGTGTTGAGGAGTTCCTTGT...................................................................................................................................................................................... 24 0 17 0.06 1 1 0 0 0 0 0
.............................................TTCCAGTGTTGAGGAGTTCCT......................................................................................................................................................................................... 21 0 17 0.06 1 1 0 0 0 0 0
..........................................CAGTTCCAGTGTTGAGGAGTTCCTTGT...................................................................................................................................................................................... 27 0 17 0.06 1 1 0 0 0 0 0
.............................................TTCCAGTGTTGAGGAGTTCCTTGTG..................................................................................................................................................................................... 25 0 17 0.06 1 1 0 0 0 0 0
.............................................................TTCCTTGTGGAACTCTCCATTACC...................................................................................................................................................................... 24 0 18 0.06 1 1 0 0 0 0 0
..............................................TCCAGTGTGGAGGAGTTCCTTGTGG.................................................................................................................................................................................... 25 1 18 0.06 1 0 1 0 0 0 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTGGGGAATT..................................................................... 28 0 18 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................GATGTCCTATGCATCGGTGACCTGGG.......................................................................... 26 0 18 0.06 1 0 1 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGTGGAACT................................................................................................................................................................................ 29 0 18 0.06 1 1 0 0 0 0 0
..............................................TCAAGTGTTGAGGAGTTCCTTGT...................................................................................................................................................................................... 23 1 18 0.06 1 1 0 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGT...................................................................................................................................................................................... 23 0 18 0.06 1 0 1 0 0 0 0
..............................................TCCAGTGTTGAGCAGTTCCTTGTGGA................................................................................................................................................................................... 26 1 18 0.06 1 0 1 0 0 0 0
............................................................................................................................................................CCTATGCATCGGTGACCTGGGGA........................................................................ 23 0 18 0.06 1 0 1 0 0 0 0
..............................................................TCCTTGTGGAACTCTCCATTACCTGC................................................................................................................................................................... 26 0 18 0.06 1 0 1 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGA...................................................................................................................................................................................... 23 1 18 0.06 1 1 0 0 0 0 0
.........................................................................................................................................................TGTCCTATGCCTCGGTGACCTGGGG......................................................................... 25 1 18 0.06 1 1 0 0 0 0 0
..................................................................TGTGGAACTCTCCATTACCTGCTCAC............................................................................................................................................................... 26 0 18 0.06 1 0 1 0 0 0 0
.............................................................TGCCTTGTGGAACTCTCCATTACCTGC................................................................................................................................................................... 27 1 18 0.06 1 1 0 0 0 0 0
..............................................TCCAGTGTTGAGCAGTTCCTTGTGGAACA................................................................................................................................................................................ 29 2 18 0.06 1 0 1 0 0 0 0
..............................................TCCAGTGTTGAGGAGTTCCTTGTTGAA.................................................................................................................................................................................. 27 1 18 0.06 1 0 0 1 0 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAAA...................................................................... 26 1 18 0.06 1 0 1 0 0 0 0
.............................................................................................................................................................................TGGGGAATTTTCTCCCTAACTGGTTAGG.................................................. 28 0 18 0.06 1 1 0 0 0 0 0
...........................................................................................................................................................TCCTATGAATCGGTGACCTGGGGA........................................................................ 24 1 18 0.06 1 1 0 0 0 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAATT..................................................................... 27 0 18 0.06 1 0 1 0 0 0 0
.............................................................TTCCTTGTGGAACTCTCCATTACCTGC................................................................................................................................................................... 27 0 18 0.06 1 0 1 0 0 0 0
............................................................................................................................................................................................................................TGCAAAGAAATCCTAGGGAAGG......... 22 0 19 0.05 1 0 1 0 0 0 0
................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTTA................................................................................ 27 1 19 0.05 1 0 0 1 0 0 0
..........................................................................................AACATGGATAAGGAATTCCC............................................................................................................................................. 20 3 19 0.05 1 0 0 0 0 1 0
................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTGA................................................................................ 27 0 19 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................TCCTATGCATCGGTGACCTGGCGA........................................................................ 24 1 19 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................GGGATGTCCTATGCATCGGTGACCTGG........................................................................... 27 0 19 0.05 1 0 1 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATATGAA............................................................................................................................ 22 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................TCGGTGACCTGGGGAATTTTCTCCCTAA........................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................GTGATGTCCTATGCATCGGTGACC.............................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................AGCGGTGACCTGGGGAATTTTCTC................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATATGAAATTCG....................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................ATGGGATGTCTTATGCATCGGTGACC.............................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................AATGGGATGTCCTATGCATCGGTGACC.............................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................ATGGGATGTCATATGCATC..................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................TGCATGGGATGTCCTATGCATCGGTGAC............................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
................................................CAGTGTTGAGGAGTTCCTTGTGGAA.................................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................................ATGGGATGTCCTCTGCATCGGTGACC.............................................................................. 26 1 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................TAAGGGATGTCCTATGCATCGGTGACC.............................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................GTCCTATGCATCGGTGACCTG............................................................................ 21 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................TCGGTGACCTGGGGAATTTTCTCCC.............................................................. 25 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................AGGTGATGTCCTATGCATCGGTGACC.............................................................................. 26 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................TGGGGAATTTTCTCCCTAACTGGT...................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...............................................CCAGTGTTGAGGAGTTCCTTGTGGAACT................................................................................................................................................................................ 28 0 20 0.05 1 0 1 0 0 0 0
................................................CAGTGTTGAGGAGTTCCTTGTGGAACT................................................................................................................................................................................ 27 0 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTGATC.............................................................................. 27 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................AGTTTTTGTATGGGATGTC.............................................................................................. 19 1 20 0.05 1 0 0 0 1 0 0
...............................................CCAGTGTTGAGGCGTTCCTTGTGGAAC................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................GCATCGGTGACCTGGGGAATTTTCTC................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATAT............................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
...............................................CCAGTTTTGAGGAGTTCCTTGTGGAA.................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................TGTCCTATGCATAGGTGACCTGGG.......................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................TTCCCAGTGCTGGTATATGAAATTCAC...................................................................................................................... 27 3 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................GCATCGGTGACCTGGGGAATTTTCTCC............................................................... 27 0 20 0.05 1 0 1 0 0 0 0
..................................................GTGTTGAGGAGTTCCTTGTGGA................................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGAATCGGTCACC.............................................................................. 25 2 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAAA...................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TTCGATGTCCTATGCATCGGTGACCT............................................................................. 26 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCTGTGACC.............................................................................. 27 1 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................TTTGGGATGTCCTATGCATCGGTGACC.............................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................TCGTTGACCTGGGGAATTTTCTCCCC............................................................. 26 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGCGACCTGG........................................................................... 28 1 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................TATGGGATGTTCTGTGCATCGGGGACC.............................................................................. 27 3 20 0.05 1 0 0 1 0 0 0
...................................................................................................................................................ATCGGATGTCCTATGCATCGGTGACC.............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................ATTCCCCAGTGCTGGTATATGAAATTCG....................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATATGAAATTCGT...................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................TCGGTGACCTGGGGAATTTTCT................................................................. 22 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................GCATCGTTGACCTGGGGAATTTTCTCCC.............................................................. 28 1 20 0.05 1 1 0 0 0 0 0
...................................................TGTTGAGGAGTTCCTTGTGGAACT................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................TTGTATGGGATGTCCTATGCATCGGTG................................................................................. 27 0 20 0.05 1 0 0 1 0 0 0
....................................................GTTGAGGAGTGCCGTGT...................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0
....................................................................................................................................................TGGGATGTTCTATGCATCGGTGACCTGG........................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................ATGGGATGTCCTATGCATCGGTGAGC.............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGG................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................TTTTTGTATGGGATGTCCTA........................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTG................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................TTGTATGGGATGTCCTATGCATCGGC.................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................ATGGGATGTCCTATGCATCGGT.................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATTCATCGGTGACCT............................................................................. 26 1 20 0.05 1 0 0 1 0 0 0
.......................................................GAGGAGCTCCTTGTGGTAGTCTC............................................................................................................................................................................. 23 3 20 0.05 1 0 0 0 0 1 0
.................................................AGTGTTGAGGAGTTCCTTGTGGCACT................................................................................................................................................................................ 26 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................GGATCGGTGACCTGGGGAATTTTCTC................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................GGCTTGCATATGAAATTCGTTA.................................................................................................................... 22 3 20 0.05 1 0 0 1 0 0 0
......................................................................................................GAATTCCCCAGTGCTGGTATATGAAA........................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................TTCCCCAGTGCTGGTATATGAAATTC........................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................ATGCATCGGTGACCTGGGGAATTTTT.................................................................. 26 1 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................................AGCGGATGTCCTATGCATCGGTGACC.............................................................................. 26 2 20 0.05 1 1 0 0 0 0 0
......................................................TGATGAGTTCCTTGTGGAACTCTC............................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAATTT.................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
...............................................CCAGTGTTGAGGAGTTCCTTGTGGAA.................................................................................................................................................................................. 26 0 20 0.05 1 0 0 0 0 0 1
....................................................GTTGAGGAGTTCCTTGTGGA................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGA................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAAT...................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATC..................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGAA....................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTGGC.......................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCCTCGGTTACC.............................................................................. 25 2 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................TTGGATGTCCTATGCATCGGTGACT.............................................................................. 25 2 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................GGATGTCCTATTCATCCGTGACCTT............................................................................ 25 3 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................GATGTCCTATGCATCGGTGACC.............................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................TGTATGTTATGTCCTACGCATCGGT.................................................................................. 25 3 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGG.......................................................................... 19 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................TTCGATGTCCTATGCATCGGTGACC.............................................................................. 25 2 20 0.05 1 1 0 0 0 0 0
...............................................CCAGTGTTGAGGAGTTCCTTGTG..................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................TGCATCGGTGACCTGGGGAATTTTCT................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGTTGAC............................................................................... 24 1 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................................CATCGGTGACCTGGGGAATTTTC.................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................ATGGGATGACCTATGCATCGGTGACC.............................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................................TCCCCAGTGCTGGTATATGAAATTC........................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................TATGCATCGGTGACCTGGGGA........................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTGGCCT............................................................................. 28 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................TGTCCTATGCATCGGTGACCTG............................................................................ 22 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TTGGATGTCCTATGCATTGGTGACCTGG........................................................................... 28 2 20 0.05 1 1 0 0 0 0 0
...............................................CCAGTGTTGAGGAGTTCCTTGTGGAAAA................................................................................................................................................................................ 28 2 20 0.05 1 0 0 0 0 0 1
....................................................................................................................................................TGGGAGGTCCTATGCATCGGTGACC.............................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................TGCGATGTCCTATGCATCGGTGACCT............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................TGCAACGGGTACCTGGGGA........................................................................ 19 3 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................TATGGGATGGCCTATGCATCGTTGACC.............................................................................. 27 2 20 0.05 1 0 0 0 0 1 0
...............................................CCAGTGTTGAGGAGTTCCTTGTGGAAT................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................TTCATCGGTGACCTGGGGAATTTTC.................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................GGGATGTCGTATGCATCGGTGACCTG............................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCTTCGGTGA................................................................................ 25 1 20 0.05 1 0 0 1 0 0 0
..............................................TGCAGTGTTGAGGAGTTCCTTGTG..................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................TCGGTGACCTGGGGAATTTTCTCC............................................................... 24 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................TGCATCGGTGACCTGGGGAATTTTCTCC............................................................... 28 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................AGGTGATGTCCTATGCATCGGTGA................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................TGAATCGGTGACCTGGGGAATTTTCT................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTTTCC.............................................................................. 25 2 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................ATGCATCGGTGACCTGGGGA........................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TTGGATTTCCTATGCATCGGTGACCT............................................................................. 26 2 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................TGCATGGGATGTCCTATGCATCGGT.................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................CATCGGTGACCTGGGGAA....................................................................... 18 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................ATGCATCGGTGACCTGGGG......................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCC............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................TATGGGATGTCCTATGCATCGGTT................................................................................. 24 1 20 0.05 1 0 0 1 0 0 0
............................................................................................CATACATTAACAATTCCCCAGTG........................................................................................................................................ 23 3 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................GTATGGGATGTCCTATGCATCGG................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GAACATCAACGTTGTAGTATTAACGTTGCGTATTACTGGGACGTCAAGGTCACAACTCCTCAAGGAACACCTTGAGAGGTAATGGACGAGTGGTACGTAATCCTTAAGGGGTCACGACCATATACTTTAAGCAATTCCTTAAAAACATACCCTACAGGATACGTAGCCACTGGACCCCTTAAAAGAGGGATTGACCAATCCCTTAAAGGGGTCCTTATGGACGTTTCTTTAGGATCCCTTCCATAAACCAT
******************************************************************************..........(((((((((((.((((..((((........(((((.(((((((......))))))))))))))))..)))))))))).)))))..****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
 V055
head
............................................CAAGGTCACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 28 0 17 1.18 20 8 12 0 0 0 0
...............................ATTACTGGGACGTCAAGGTCACAAC................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
.............................................................................GGTAATGGACGAGTGGTACGTAAT...................................................................................................................................................... 24 0 9 0.78 7 1 0 3 1 2 0
............................................CAAGGTCACAACTCCTCAAGGAACAC..................................................................................................................................................................................... 26 0 17 0.53 9 3 2 1 3 0 0
......................................................................................................CTTAAGGGGTCACGACCATATACTTT........................................................................................................................... 26 0 20 0.50 10 9 1 0 0 0 0
.....................................................................................................CCTTAAGGGGTCACGACCATATACTTT........................................................................................................................... 27 0 20 0.40 8 8 0 0 0 0 0
........................................................................TGAGAGGTAATGGACGAGTGGTACGT......................................................................................................................................................... 26 0 11 0.36 4 2 0 2 0 0 0
...............................................GGTCACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 25 0 20 0.35 7 6 1 0 0 0 0
........................................................................................................TAAGGGGTCACGACCATATACTTT........................................................................................................................... 24 0 20 0.30 6 3 3 0 0 0 0
.......................................................................................................TTAAGGGGTCACGACCATATACTTT........................................................................................................................... 25 0 20 0.30 6 4 2 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAACACCTT.................................................................................................................................................................................. 29 0 17 0.29 5 4 1 0 0 0 0
....................................TGGGACGTCAAGGTCACAAC................................................................................................................................................................................................... 20 0 7 0.29 2 0 2 0 0 0 0
..........................................................................................................................................................CAGGATACGTAGCCACTGGACCCCTT....................................................................... 26 0 18 0.17 3 1 2 0 0 0 0
...........................................................................................................................................................................GGACCCCTTAAAAGAGGGATTGACCAAT.................................................... 28 0 19 0.16 3 1 1 1 0 0 0
...........................................................................................................GGGGTCACGACCATATACTTTAAG........................................................................................................................ 24 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................................AAGGGGTCACGACCATATACTTT........................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0
..................................................CACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 22 0 20 0.15 3 0 3 0 0 0 0
....................................TGGGTCGTCAAGGTCACAACTCCTC.............................................................................................................................................................................................. 25 1 7 0.14 1 0 0 1 0 0 0
............................................................................AGGTAATGGACGAGTGGTACGTAAT...................................................................................................................................................... 25 0 9 0.11 1 0 0 1 0 0 0
..............................................................................GTAATGGACGAGTGGTACGTAATCCT................................................................................................................................................... 26 0 9 0.11 1 0 0 0 1 0 0
...................................................................................GGACGAGTGGTACGTAATCC.................................................................................................................................................... 20 0 9 0.11 1 0 0 1 0 0 0
..........................................................................AGAGGTAATGGACGAGTGGTACGTAAT...................................................................................................................................................... 27 0 9 0.11 1 0 0 1 0 0 0
.............................................................................GGTAATGGACGAGTGGTACGTAATC..................................................................................................................................................... 25 0 9 0.11 1 0 0 1 0 0 0
...............................................................................................CGTAATCCTTAAGGGGTCACGACCAT.................................................................................................................................. 26 0 9 0.11 1 0 1 0 0 0 0
.......................................................................................................................................................CTACAGGATACGTAGCCACTGGACC........................................................................... 25 0 19 0.11 2 0 2 0 0 0 0
.....................................................................CCTTGAGAGGTAATGGACGAGT................................................................................................................................................................ 22 0 20 0.10 2 0 0 1 0 1 0
................................................GTCACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................................................................TTCTTTGGGATCCCATCGA........ 19 3 20 0.10 2 2 0 0 0 0 0
....................................................................................................TCCTTAAGGGGTCACGACCATATACTTT........................................................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................AAGGGGTCACGACCATATACTT............................................................................................................................ 22 0 20 0.10 2 2 0 0 0 0 0
...................................................ACAACTCCTCAAGGAACACC.................................................................................................................................................................................... 20 0 20 0.10 2 1 1 0 0 0 0
............................................................................AGGTAATGGACGAGTGATACGTAAT...................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0
.................................................TCACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
..................................................CACAACTCCTCAAGGAACACCTT.................................................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0
..................................................CACAACTCCTCAAGGAACAACT................................................................................................................................................................................... 22 1 20 0.10 2 0 2 0 0 0 0
.........................................................................GAGAGGTAATGGACGAGTGGTACGT......................................................................................................................................................... 25 0 11 0.09 1 0 0 1 0 0 0
...........................................................................GAGGTAATGGACGAGTGGTACGT......................................................................................................................................................... 23 0 11 0.09 1 0 0 1 0 0 0
.............................................................................GGTAATGGACGAGTGGTACGT......................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
..........................................................................AGAGGTAATGGACGAGTGGTACGT......................................................................................................................................................... 24 0 11 0.09 1 0 1 0 0 0 0
......................................................................CTTGAGAGGTAATGGACGAGTGGTACG.......................................................................................................................................................... 27 0 11 0.09 1 0 1 0 0 0 0
.............................................................................GGTAATGGTCAAGTGGCACGT......................................................................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 1
..............................................................................................................................TTAAGCAATTCCTTAAAAACATACCCTA................................................................................................. 28 0 13 0.08 1 0 1 0 0 0 0
.......................................GACGTCAAGGTCACAACTCCTCAAGGAA........................................................................................................................................................................................ 28 0 13 0.08 1 1 0 0 0 0 0
.....................................GGGACGTCAAGGTCACAACTCCTCAAG........................................................................................................................................................................................... 27 0 13 0.08 1 1 0 0 0 0 0
.............................................................................GGTAATAGTCAAGTGGTACGT......................................................................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 1
.........................................................................................................................................................................................AGGGATTGACCAATCCCTTAAAGGGGT....................................... 27 0 14 0.07 1 0 1 0 0 0 0
.....................................GGGACGTCAAGGTCACAAATC................................................................................................................................................................................................. 21 1 14 0.07 1 0 1 0 0 0 0
.........................................CGTCAAGGTCACAACTCCTCAGGGAA........................................................................................................................................................................................ 26 1 15 0.07 1 0 1 0 0 0 0
.......................................................................................................................................................CTACAGGATACGTAGCCACTGGACCCCTT....................................................................... 29 0 17 0.06 1 0 1 0 0 0 0
......................................................................................................................................................CCTACAGGATACGTAGCCACTGGACCCC......................................................................... 28 0 17 0.06 1 1 0 0 0 0 0
...........................................TCAAGGTCACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 29 0 17 0.06 1 1 0 0 0 0 0
...........................................TCAAGGTCACAACTCCTCAAGGAACAC..................................................................................................................................................................................... 27 0 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAAGA...................................................................................................................................................................................... 25 1 17 0.06 1 0 1 0 0 0 0
...........................................TCAAGGTCACAACTCCTCAAGGAACACC.................................................................................................................................................................................... 28 0 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCCCAACTCCTCAAGGAACACCTT.................................................................................................................................................................................. 29 1 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAACACC.................................................................................................................................................................................... 27 0 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAACA...................................................................................................................................................................................... 25 0 17 0.06 1 0 1 0 0 0 0
............................................AAAGGTCACAACTCCTCAAGGAACACC.................................................................................................................................................................................... 27 1 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAACATCTT.................................................................................................................................................................................. 29 1 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAACACGT................................................................................................................................................................................... 28 1 17 0.06 1 0 1 0 0 0 0
............................................CAAGGTCACAACTCCTCAAGGAA........................................................................................................................................................................................ 23 0 17 0.06 1 0 1 0 0 0 0
.........................................................................................................................................................ACAGGATACGTAGCCACTGGACCCCT........................................................................ 26 0 18 0.06 1 1 0 0 0 0 0
...........................................................................................................................................................................GGACCCCTTAAAAGAGGGATTGACCAATC................................................... 29 0 18 0.06 1 0 1 0 0 0 0
............................................................................................................................................................GGATACGTAGCCACTGGACCCCCT....................................................................... 24 1 18 0.06 1 1 0 0 0 0 0
..........................................................................................................................................................CAGGATACGTAGCCACTGGACCCCT........................................................................ 25 0 18 0.06 1 0 1 0 0 0 0
...........................................................................................................................................................AGGATACGGAGCCACTGGACCCCTT....................................................................... 25 1 18 0.06 1 1 0 0 0 0 0
........................................................................................................................TACACTTTAAGCAAATCCGTAA............................................................................................................. 22 3 18 0.06 1 1 0 0 0 0 0
............................................................................................................................................................GGATACGTAGCCACTGGACCCCT........................................................................ 23 0 18 0.06 1 1 0 0 0 0 0
.........................................................................................................................................................ACAGGATACGTAGCCACTGGACCCCTT....................................................................... 27 0 18 0.06 1 1 0 0 0 0 0
.......................................................................TTGAGAGGTAATGGACGAGTGGTA............................................................................................................................................................ 24 0 18 0.06 1 1 0 0 0 0 0
..............................................AGGTCACAACTCCTCAAGGAACACCTT.................................................................................................................................................................................. 27 0 18 0.06 1 1 0 0 0 0 0
..................................................................................................................................................................GTAGCCACTGGACCCCTTAAA.................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.................................TACTGGGACACCAAGGTCG....................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0
..................................................CACAACTCCTCAAGGAAAAC..................................................................................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
.............................................................................................................GGACACGACCATATACTTTAAGCA...................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................GGGGTCACGACCATATACTTTAAGCAAT.................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................ATACCCTACAGGATACGTAGCCACT................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
...............................................GGTCACAACTCCTCAAGGAACACC.................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................TGTCACGACCATGTACTTTAA......................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................................CCTTAAGGGGTCACGACCATATACTT............................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................AAGGGGTCACGACCATATACTTTA.......................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................GCCACTGGACCCCTTAGGGGAGGGA............................................................. 25 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................CTTAAGGGGTCACGACCATATACTGT........................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................CCCTACAGGATACGTAGCCACTGGAC............................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
...................................................ACAACTCCTCAAGGAACACCT................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................CTTAAGGGGTCACGACCATATAC.............................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................AGGGGTCACGACCATATACTTT........................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 1
..............................................................................................................................................................................CCCCTTAAAAGAGGGATTGACCAAT.................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................CCCTACAGGATACGTAGCCACTGGA............................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................TAAGGGGTCACGACCATATACTTTA.......................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................GGGGTCACGACCATATACTTTAGG........................................................................................................................ 24 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................CCACTGGACCCCTTAAAAGAGGGATT........................................................... 26 0 20 0.05 1 0 1 0 0 0 0
............................................................................................................GGGTCACGACCATATACTGT........................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................CATACCCTACAGGATACGTAGCCAT................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................GGGGTCACGACCATATACTTT........................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
......................................................ACTCCTCAAGGAACACCTT.................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................TTAAGGGGTCACGACCATATACTT............................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................GGTCACGACCATATACTTTAGG........................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0
..................................................CACAACTCCTCAAGGAACAC..................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................TAAGGGGTCACGACCATATACT............................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0
..................................................CACAACCCCTCAAGGAACACC.................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
.....................................................................CCTTGAGAGGTAATGGACGA.................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1 0
.........................................................................................................AAGGGGTCACGACCATATGCTTT........................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0
.......................................................................................................TTAAGGGGTCACGACCATATACTGT........................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................CCCTTAAAAGAGGGATTGACTAAT.................................................... 24 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................CTTAAAAGAGGGATTGACCAAT.................................................... 22 0 20 0.05 1 0 1 0 0 0 0
..................................................CACAACTCCTCAAGGAACA...................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................CTTAAGGGGTCACGACCATAT................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................CCTTAAAAGAGGGATTGACCAAT.................................................... 23 0 20 0.05 1 0 0 0 1 0 0
..................................................................................................TTTCCTTAAGGGGTCACGACCATATACT............................................................................................................................. 28 2 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................CCACTGGACCCCTTAAAAGAGGGAT............................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................CTTAAAAACATACCCTACAGGATATGGA...................................................................................... 28 2 20 0.05 1 0 1 0 0 0 0
.........................................................................................................AAGGGGTCACGACCATATACTTTAAG........................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
........................................................TCCTCAAGGAACTCCATGA................................................................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0 0
.............................................................AAAGAACACCTTGAGAGGTAATGGACG................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 1 0
.......................................................................................................TTAAGGGGTCACGACCATATACT............................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................CTTAAGGGGTCACGACCATATACT............................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
...............................................GGTCACAACTCCTCAGGGAACACC.................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................ATTAAAGGGTCACGACCATATACT............................................................................................................................. 24 2 20 0.05 1 0 0 0 1 0 0
........................................................................................................TAAGGGGTCACGACCATATACTGT........................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
................................................GTCACAACTCCTCAAGGAAC....................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................AGCCACTGGACCCCTTAAAAGAGGTA............................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................CATACCCTACAGGATACGTAGCCAC................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................AAAAACATACCCTACAGGATACGTA...................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:15268800-15269050 + dan_735 CTTG----TAGTTGCAACATCATAATTGCAACGCATAATGACCCTGCAGTTCCA---GTGTTGAGGAGTTCCTTGTGGAACTCTCCATT-----------------------ACCTGCTCACCATGCATTAGGAATTCCCCAGTGCTGGTATATGAAATTCGTTAAGGAATTTTTGTATGGGATGTCCTATGCATCGGTGACCTGGGGAATTTTCTCCCTAACTGGTTAGGGAATTTCCCCAGGAATACCTGCAAAGAAATCCTAGGGAAGGTATTTGGTA
droBip1 scf7180000395039:8263-8505 - TAAC----CCTT----------------------------------TAGTACTAGGAGTACTGAGGAGTTTACAAGGGAACTCTCTCTTGTTCACAAAGGGAAAGGGTATTAACCTGCTCACCACTCTTAGGGAATTACCTAGTGACCGTATATGAAAATCGTTGAAGAGTTTTTGTATGGGATGTCATATGCATCGGTGACCTGCGGATTTGTTTTCTCAACGAGCTGCGGAATTATCACACAAATTCATGCAAATAAATCTTAGGAAAGGTATGGGTTA
droKik1 scf7180000302384:129474-129510 - CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000451508:281053-281089 + CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491028:1695591-1695627 - CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778654:25520-25556 + CTTTT---T*GTTGCAACGTCATAATTGCAACGCATAATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302422:9057994-9058030 + CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415604:211046-211082 - CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409463:537164-537204 + CTTATAGGTAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:7366508-7366544 + CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:7119632-7119668 + CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_3:2881644-2881680 + CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:5537390-5537426 - CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:16281295-16281331 + CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group3:719820-719856 - CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:2196098-2196134 - CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004585:5346911-5346947 + AT---------CTACCAGGTCATAATTGCCACGCATAATGAGGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:18483099-18483135 - CTCG----TAGTTGCAACGTCATAATTGCAGCGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:4938494-4938530 + CTCG----TAGTTGCAACGTCATAATTGCAGCGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTTG----TAGTTGCAACATCATAATTGCAACGCATAATGACCCTGCAGTTCCA---GTGTTGAGGAGTTCCTTGTGGAACTCTCCATT-----------------------ACCTGCTCACCATGCATTAGGAATTCCCCAGTGCTGGTATATGAAATTCGTTAAGGAATTTTTGTATGGGATGTCCTATGCATCGGTGACCTGGGGAATTTTCTCCCTAACTGGTTAGGGAATTTCCCCAGGAATACCTGCAAAGAAATCCTAGGGAAGGTATTTGGTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGTGACC..............................................................................27207.9015871465000
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGACC..............................................................................25204.05816723000
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGTGAC...............................................................................26200.95194150000
..................................................TCCA---GTGTTGAGGAGTTCCTTGTG............................................................................................................................................................................................................24180.7814119003
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGTGA................................................................................25200.6513138010
.................................................................................................................................................................................ATGGGATGTCCTATGCATCGGTGACC..............................................................................26200.65132101000
..................................................TCCA---GTGTTGAGGAGTTCCTTGTGG...........................................................................................................................................................................................................25180.509421002
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTGGG..........................................................................24190.479720000
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCT.............................................................................26200.408341000
..............................................................................................................................................................................TGTATGGGATGTCCTATGCATCGGT..................................................................................25200.357160000
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTGG...........................................................................23200.357700000
.....................................................................................CATT-----------------------ACCTGCTCACCATGCATTAGGAA..................................................................................................................................................2790.333100002
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTGGGGA........................................................................26180.285500000
..............................................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTGACC..............................................................................29190.265050000
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGTG.................................................................................24200.255212000
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCTG............................................................................27200.255401000
....................................................................................................................................................GTATATGAAATTCGTTAAGGAATTT............................................................................................................25130.233011001
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGGGA........................................................................24180.224310000
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGGG.........................................................................23180.224400000
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTGGGG.........................................................................25180.224400000
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTGGGGA........................................................................25180.224310000
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTGGGGAA.......................................................................27180.224400000
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCTGG...........................................................................28190.214400000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAATT.....................................................................24200.204400000
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGAC...............................................................................24200.204220000
............................................TGCAGTTCCA---GTGTTGAGGAGTTC..................................................................................................................................................................................................................24150.203120000
..................................................TCCA---GTGTTGAGGAGTTCCTTGTGGAA.........................................................................................................................................................................................................27180.173011010
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAAT......................................................................26180.173210000
..................................................TCCA---GTGTTGAGGAGTTCCTTG..............................................................................................................................................................................................................22180.173102000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAATTTTC..................................................................27190.163210000
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTGGG..........................................................................23190.163210000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAATTTT...................................................................26190.163200001
........................................................................................................................................TCCCCAGTGCTGGTATATGAAATTCGTT.....................................................................................................................28200.153201000
..............................................................................................................................................................................TGTATGGGATGTCCTATGCATCGGC..................................................................................25200.153030000
...................................................CCA---GTGTTGAGGAGTTCCTTGTGGAAC........................................................................................................................................................................................................27200.153110010
................................................................................................................................................................................................CATCGGTGACCTGGGGAATTTTCTCC...............................................................26200.153120000
..............................................................................................................................................................................................TGCATCGGTGACCTGGGGAATTTTC..................................................................25200.153030000
.......................................................................................................................................TTCCCCAGTGCTGGTATATGAAATTCGC......................................................................................................................28200.153030000
.......................................................................................................................................TTCCCCAGTGCTGGTATATGAAATTCGTT.....................................................................................................................29200.153210000
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGTGACCT.............................................................................28200.153030000
........................................ACCCTGCAGTTCCA---GTGTTGAGGAG.....................................................................................................................................................................................................................2570.141100000
............................................TGCAGTTCCA---GTGTTGAGGAGTTCC.................................................................................................................................................................................................................25150.132110000
..............................................CAGTTCCA---GTGTTGAGGAGTTCC.................................................................................................................................................................................................................23170.122110000
......................................................................................................................TCACCATGCATTAGGAATTCCCCAGT.........................................................................................................................................2690.111010000
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAA.......................................................................25180.112200000
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTGGGG.........................................................................24180.112200000
..................................................TCCA---GTGTTGAGGAGTTCCTTGTGGA..........................................................................................................................................................................................................26180.112110000
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTGGGGAA.......................................................................26180.112200000
.........................................................................................................................................................................................................................................................CTGCAAAGAAATCCTAGGGAAGG.........23190.112010010
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGG..........................................................................22190.112200000
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTGG...........................................................................22200.102200000
....................................................................................................................................................................................GGATGTCCTATGCATCGGTGACC..............................................................................23200.102020000
..............................................................................................................................................................................................TGCATCGGTGACCTGGGGA........................................................................19200.102110000
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGT..................................................................................23200.102110000
..........................................................TGTTGAGGAGTTCCTTGTGGAACTC......................................................................................................................................................................................................25200.102020000
...................................................CCA---GTGTTGAGGAGTTCCTTGTGG...........................................................................................................................................................................................................24200.102200000
................................................................................................................................................................................................CATCGGTGACCTGGGGAATTTTCTC................................................................25200.102200000
....................................................CA---GTGTTGAGGAGTTCCTTGTGGAAC........................................................................................................................................................................................................26200.102110000
........................................................................................................................................TCCCCAGTGCTGGTATATGAAATTCGT......................................................................................................................27200.102110000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGG.........................................................................20200.102200000
..........................................CCTGCAGTTCCA---GTGTTGAGGAGT....................................................................................................................................................................................................................24130.081010000
..........................................CCTGCAGTTCCA---GTGTTGAGGAGTTCC.................................................................................................................................................................................................................27130.081010000
...........................................CTGCAGTTCCA---GTGTTGAGGAGTTC..................................................................................................................................................................................................................25130.081010000
............................................TGCAGTTCCA---GTGTTGAGGAGT....................................................................................................................................................................................................................22150.071100000
............................................TGCAGTTCCA---GTGTTGAGG.......................................................................................................................................................................................................................19150.071001000
............................................TGCAGTTCCA---GTGTTGAGGAGTTCCTTGT.............................................................................................................................................................................................................29150.071100000
............................................TGCAGTTCCA---GTGTTGAGGAGTTCCTT...............................................................................................................................................................................................................27150.071100000
............................................TGCAGTTCCA---GTGTTGAGGAGTTCCT................................................................................................................................................................................................................26150.071100000
..............................................CAGTTCCA---GTGTTGAGGAGTTCCT................................................................................................................................................................................................................24170.061100000
...............................................................................................................................................................................................................................TGGTTAGGGAATTTCCCCAGGAAT..................................24170.061010000
.................................................TTCCA---GTGTTGAGGAGTTCCTTG..............................................................................................................................................................................................................23170.061100000
.................................................TTCCA---GTGTTGAGGAGTTCCTTGT.............................................................................................................................................................................................................24170.061010000
.................................................TTCCA---GTGTTGAGGAGTTCCT................................................................................................................................................................................................................21170.061010000
..............................................CAGTTCCA---GTGTTGAGGAGTTCCTTGT.............................................................................................................................................................................................................27170.061010000
.................................................TTCCA---GTGTTGAGGAGTTCCTTGTG............................................................................................................................................................................................................25170.061010000
....................................................................TTCCTTGTGGAACTCTCCATT-----------------------ACC......................................................................................................................................................................24180.061010000
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTGGGGAATT.....................................................................28180.061100000
.....................................................................................................................................................................................GATGTCCTATGCATCGGTGACCTGGG..........................................................................26180.061100000
..................................................TCCA---GTGTTGAGGAGTTCCTTGTGGAACT.......................................................................................................................................................................................................29180.061010000
..................................................TCCA---GTGTTGAGGAGTTCCTTGT.............................................................................................................................................................................................................23180.061100000
..........................................................................................................................................................................................CCTATGCATCGGTGACCTGGGGA........................................................................23180.061100000
.....................................................................TCCTTGTGGAACTCTCCATT-----------------------ACCTGC...................................................................................................................................................................26180.061100000
..................................................TCCA---GTGTTGAGGAGTTCCTTGA.............................................................................................................................................................................................................23180.061010000
.........................................................................TGTGGAACTCTCCATT-----------------------ACCTGCTCAC...............................................................................................................................................................26180.061100000
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAAA......................................................................26180.061100000
...........................................................................................................................................................................................................TGGGGAATTTTCTCCCTAACTGGTTAGG..................................................28180.061010000
.........................................................................................................................................................................................TCCTATGCATCGGTGACCTGGGGAATT.....................................................................27180.061100000
....................................................................TTCCTTGTGGAACTCTCCATT-----------------------ACCTGC...................................................................................................................................................................27180.061100000
..........................................................................................................................................................................................................................................................TGCAAAGAAATCCTAGGGAAGG.........22190.051100000
..............................................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTGA................................................................................27190.051010000
...................................................................................................................................................................................GGGATGTCCTATGCATCGGTGACCTGG...........................................................................27190.051100000
.......................................................................................................................................TTCCCCAGTGCTGGTATATGAA............................................................................................................................22200.051001000
..................................................................................................................................................................................................TCGGTGACCTGGGGAATTTTCTCCCTAA...........................................................28200.051100000
.......................................................................................................................................TTCCCCAGTGCTGGTATATGAAATTCG.......................................................................................................................27200.051100000
....................................................CA---GTGTTGAGGAGTTCCTTGTGGAA.........................................................................................................................................................................................................25200.051000010
........................................................................................................................................................................................GTCCTATGCATCGGTGACCTG............................................................................21200.051001000
..................................................................................................................................................................................................TCGGTGACCTGGGGAATTTTCTCCC..............................................................25200.051010000
...........................................................................................................................................................................................................TGGGGAATTTTCTCCCTAACTGGT......................................................24200.051010000
...................................................CCA---GTGTTGAGGAGTTCCTTGTGGAACT.......................................................................................................................................................................................................28200.051100000
....................................................CA---GTGTTGAGGAGTTCCTTGTGGAACT.......................................................................................................................................................................................................27200.051000001
...............................................................................................................................................................................................GCATCGGTGACCTGGGGAATTTTCTC................................................................26200.051010000
.......................................................................................................................................TTCCCCAGTGCTGGTATAT...............................................................................................................................19200.051010000
...............................................................................................................................................................................................GCATCGGTGACCTGGGGAATTTTCTCC...............................................................27200.051100000
.........................................................GTGTTGAGGAGTTCCTTGTGGA..........................................................................................................................................................................................................22200.051100000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAAA......................................................................23200.051100000
......................................................................................................................................ATTCCCCAGTGCTGGTATATGAAATTCG.......................................................................................................................28200.051100000
.......................................................................................................................................TTCCCCAGTGCTGGTATATGAAATTCGT......................................................................................................................28200.051010000
..................................................................................................................................................................................................TCGGTGACCTGGGGAATTTTCT.................................................................22200.051100000
..........................................................TGTTGAGGAGTTCCTTGTGGAACT.......................................................................................................................................................................................................24200.051000001
.............................................................................................................................................................................TTGTATGGGATGTCCTATGCATCGGTG.................................................................................27200.051001000
................................................................................................................................................................................TATGGGATGTCCTATGCATCGG...................................................................................22200.051010000
..........................................................................................................................................................................TTTTTGTATGGGATGTCCTA...........................................................................................20200.051001000
..............................................................................................................................................................................TGTATGGGATGTCCTATGCATCGGTG.................................................................................26200.051100000
.............................................................................................................................................................................TTGTATGGGATGTCCTATGCATCGGC..................................................................................26200.051010000
.................................................................................................................................................................................ATGGGATGTCCTATGCATCGGT..................................................................................22200.051100000
....................................................................................................................................GAATTCCCCAGTGCTGGTATATGAAA...........................................................................................................................26200.051100000
.......................................................................................................................................TTCCCCAGTGCTGGTATATGAAATTC........................................................................................................................26200.051010000
.............................................................................................................................................................................................ATGCATCGGTGACCTGGGGAATTTTT..................................................................26200.051000010
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAATTT....................................................................25200.051100000
...................................................CCA---GTGTTGAGGAGTTCCTTGTGGAA.........................................................................................................................................................................................................26200.051000010
...........................................................GTTGAGGAGTTCCTTGTGGA..........................................................................................................................................................................................................20200.051000001
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGA................................................................................23200.051100000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAAT......................................................................23200.051010000
................................................................................................................................................................................TATGGGATGTCCTATGCATC.....................................................................................20200.051000001
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGAA.......................................................................22200.051100000
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTGGC..........................................................................24200.051010000
.....................................................................................................................................................................................GATGTCCTATGCATCGGTGACC..............................................................................22200.051010000
............................................................................................................................................................................................TATGCATCGGTGACCTGGG..........................................................................19200.051001000
...................................................CCA---GTGTTGAGGAGTTCCTTGTG............................................................................................................................................................................................................23200.051100000
..............................................................................................................................................................................................TGCATCGGTGACCTGGGGAATTTTCT.................................................................26200.051100000
................................................................................................................................................................................................CATCGGTGACCTGGGGAATTTTC..................................................................23200.051010000
........................................................................................................................................TCCCCAGTGCTGGTATATGAAATTC........................................................................................................................25200.051010000
............................................................................................................................................................................................TATGCATCGGTGACCTGGGGA........................................................................21200.051010000
.......................................................................................................................................................................................TGTCCTATGCATCGGTGACCTG............................................................................22200.051100000
...................................................CCA---GTGTTGAGGAGTTCCTTGTGGAAAA.......................................................................................................................................................................................................28200.051000010
...................................................CCA---GTGTTGAGGAGTTCCTTGTGGAAT........................................................................................................................................................................................................27200.051010000
..................................................................................................................................................................................................TCGGTGACCTGGGGAATTTTCTCC...............................................................24200.051010000
..............................................................................................................................................................................................TGCATCGGTGACCTGGGGAATTTTCTCC...............................................................28200.051010000
.............................................................................................................................................................................................ATGCATCGGTGACCTGGGGA........................................................................20200.051100000
................................................................................................................................................................................................CATCGGTGACCTGGGGAA.......................................................................18200.051000001
.............................................................................................................................................................................................ATGCATCGGTGACCTGGGG.........................................................................19200.051100000
..................................................................................................................................................................................TGGGATGTCCTATGCATCGGTGACCC.............................................................................26200.051010000
................................................................................................................................................................................TATGGGATGTCCTATGCATCGGTT.................................................................................24200.051001000
...............................................................................................................................................................................GTATGGGATGTCCTATGCATCGG...................................................................................23200.051100000
droBip1
TAAC----CCTT----------------------------------TAGTACTAGGAGTACTGAGGAGTTTACAAGGGAACTCTCTCTTGTTCACAAAGGGAAAGGGTATTAACCTGCTCACCACTCTTAGGGAATTACCTAGTGACCGTATATGAAAATCGTTGAAGAGTTTTTGTATGGGATGTCATATGCATCGGTGACCTGCGGATTTGTTTTCTCAACGAGCTGCGGAATTATCACACAAATTCATGCAAATAAATCTTAGGAAAGGTATGGGTTASizeHit CountTotal NormTotal
No Reads
droKik1
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTTTT---T*GTTGCAACGTCATAATTGCAACGCATAATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTTATAGGTAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droSim2
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CTTG----TAGTTGCAACGTCATAATTGCAACGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AT---------CTACCAGGTCATAATTGCCACGCATAATGAGGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droMoj3
CTCG----TAGTTGCAACGTCATAATTGCAGCGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTCG----TAGTTGCAACGTCATAATTGCAGCGCATAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:08 PM