ID:

dan_622

 Coordinate:

scaffold_12916:9462644-9462794 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.8

Flybase annnotation

exon [dana_GLEANR_16265:1]; CDS [Dana\GF15499-cds]; intron [Dana\GF15499-in]

Repeatable elements

NameClassFamilyStrand
T-richLow_complexityLow_complexity+
mature
  1. scaffold_216:324-349 +
  2. scaffold_8285:464-489 -
  3. scaffold_8493:975-1000 +
  4. scaffold_12605:45548-45573 -
  5. scaffold_12916:7777460-7777485 +
  6. dan_622  scaffold_12916:9462691-9462716 +
  7. scaffold_12948:517388-517413 +
  8. scaffold_12984:540854-540879 -
  9. scaffold_13280:510728-510753 +
  10. scaffold_13334:1093162-1093187 -
  11. scaffold_13335:815033-815058 +
  12. scaffold_13337:18169815-18169840 +
  13. scaffold_13339:871061-871086 +
  14. scaffold_13340:19981224-19981249 +
  15. scaffold_13767:103205-103230 +
star
  1. scaffold_216:289-316 +
  2. scaffold_8285:497-524 -
  3. scaffold_8493:940-967 +
  4. scaffold_12605:45581-45608 -
  5. scaffold_12916:7777425-7777452 +
  6. dan_622  scaffold_12916:9462656-9462683 +
  7. scaffold_12948:517353-517380 +
  8. scaffold_12984:540887-540914 -
  9. scaffold_13280:510693-510720 +
  10. scaffold_13334:1093195-1093222 -
  11. scaffold_13335:814998-815025 +
  12. scaffold_13337:18169780-18169807 +
  13. scaffold_13339:871026-871053 +
  14. scaffold_13340:19981189-19981216 +
  15. scaffold_13767:103170-103197 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGATTTGCGGAGCATCATCAAGGGCTATAACATCTTCCAGATAATATACAGTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCACTCGGATTTAAACCAAATAATTTTTTTTAAGTAAAACGATCAATTCTTTATAAAATACAAAAGTTTTTTTTTTTTTGGTTTGGTTTTTATATTTTTTTTATTTTTTTTTCAAAAACATAGCTGAAAACCTACAT
**************************************************************........((((....(((.((..((...(((........)))))..)).)))....))))******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V055
head
 V106
head
...........................TAACATCTTCCAGATAATATACAGTGCC.................................................................................................................................................................................................... 28 0 1 9.00 9 7 2 0 0 0 0
..............TCATCAAGGGCTATAACATCTTCCAGA.................................................................................................................................................................................................................. 27 0 1 7.00 7 6 0 1 0 0 0
.GATTTGCGGAGCATCATCAAGGGC.................................................................................................................................................................................................................................. 24 0 1 5.00 5 1 2 1 1 0 0
...............CATCAAGGGCTATAACATCTTCCAGA.................................................................................................................................................................................................................. 26 0 1 4.00 4 1 2 1 0 0 0
................................TCTTCCAGATAATATACAGTGCCGCTC................................................................................................................................................................................................ 27 0 1 4.00 4 2 2 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTCGGA................................................................................................................................ 26 0 15 3.47 52 44 8 0 0 0 0
....................................CCAGATAATATACAGTGCCGCTCAAC............................................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0
...........................TAACATCTTCCAGATAATATACAGTGC..................................................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGATT.............................................................................................................................. 25 0 15 2.60 39 20 17 2 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 0 15 2.07 31 19 11 1 0 0 0
..................................TTCCAGATAATATACAGTGCCGCTCAAC............................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0
..............................CATCTTCCAGATAATATACAGTGCC.................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
................................TCTTCCAGATAATATACAGTGCCGC.................................................................................................................................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTCGG................................................................................................................................. 25 0 15 1.47 22 15 7 0 0 0 0
........................................................................................................TTCATAACGAGCACTCGGATTTAAACC........................................................................................................................ 27 0 15 1.47 22 16 4 1 0 0 1
.................................................................................................TAATATCTTCATAACGAGCACTCGGATT.............................................................................................................................. 28 0 15 1.13 17 10 7 0 0 0 0
............CATCATCAAGGGCTATAACATCTTCC..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.......CGGAGCATCATCAAGGGCTATAACATC......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
...........................TAACATCTTCCAGATAATATACAGT....................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
............CATCATCAGGGGCTATAACATCTTCCA.................................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
.............ATCATCAAGGGCTATAACATCTTCCA.................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.........................TATAACATCTTCCAGATAATATACAGT....................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................TAACATCTTCTAGATAATATACAGT....................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
...............CATCAAGGGCTATAACATCTTCCAG................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
..................................TTCCAGATAATATACAGTGCCGCTC................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.................................CTTCCAGATAATATACAGTGCCGCTCA............................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..........................ATAACATCTTCCAGATAATATACAGTGCC.................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
.....TGCGGAGCATCATCAAGGGCTATAT............................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0
............CATCATCAAGGGCTATAACATCTTC...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
................ATCAAGGGCTATAACATCTTCCAGAT................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
..ATTTGCGGAGCATCATCAAGGT................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
......GCGGAGCATCATCAAGGGCTATAACA........................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
....TTGCGGAGCATCATCAAGGGC.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
....TTGCGGAGAATCATCAAGGGCTATAACA........................................................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
......GCCGAGCATCATCAAGGGCTATAACATC......................................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
............CATCATCAAGGGCTATAACATCTTCCAGA.................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0
.........GACTATCATCAAGGGCTATAAAATCT........................................................................................................................................................................................................................ 26 3 1 1.00 1 1 0 0 0 0 0
......................................AGATAATATACAGTGCCGCTCAAC............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...TTTGCGGAGCATCATCAAGGGCTATAAC............................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
.........GAGCATCATCAAGGGCTATAACATCT........................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTCGGAT............................................................................................................................... 27 0 15 1.00 15 10 5 0 0 0 0
..............................CATCTTCCAGATAATATACAGTGCCGC.................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
..........AGCATCATCAAGGGCTATAACATCT........................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
................................TCTTCCAGATAATATACAGTGCCGCT................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
...................................TCCAGATAGTATACAGTGCCGCTCAAC............................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0
TGATTTGCGGAGCATCATCAAGGGC.................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
..................................TGCTAGATAATATACAGTGCCGCTCAAC............................................................................................................................................................................................. 28 2 1 1.00 1 1 0 0 0 0 0
.....TGCGGAGCATCATCAAGGGCTATAACA........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
.GATTTGCGGAGCATCATCAAGGGCTA................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
...TTTGCGGAGCATCATCAAGGGCTAT............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.............ATCATCAAGGGCTATAACATCTTCCAGA.................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
...............................ATCCTCCAGATAATATACAGTGCCGC.................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................TCAATTCTTTATAAAATACAAAAGTTT.................................................................... 27 0 15 0.93 14 14 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGA................................................................................................................................ 23 0 15 0.87 13 5 8 0 0 0 0
..........................................................................................TAGAACATAATATCTTCATAACGAGCAC..................................................................................................................................... 28 0 15 0.67 10 8 2 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGATTTA............................................................................................................................ 27 0 15 0.67 10 0 10 0 0 0 0
......................................................................................................TCTTCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 28 0 15 0.67 10 7 3 0 0 0 0
..............................................................TTAATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 1 15 0.53 8 8 0 0 0 0 0
........................................................................................................TTCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 26 0 15 0.53 8 6 2 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGATTT............................................................................................................................. 26 0 15 0.53 8 2 6 0 0 0 0
.............AGCTTCAAGGGCTATAACATC......................................................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGAT............................................................................................................................... 24 0 15 0.47 7 5 2 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGATC.............................................................................................................................. 25 1 15 0.47 7 7 0 0 0 0 0
............................................................................................................................................................TCAATTCTTTATAAAATACAAAAGTT..................................................................... 26 0 15 0.47 7 7 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTTCAAAAACATAGCTGAAAACC..... 25 0 15 0.40 6 5 1 0 0 0 0
...............................................................GAATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 27 0 15 0.40 6 2 4 0 0 0 0
......................................................................................................TCTTCATAACGAGCACTCGGATTTAAA.......................................................................................................................... 27 0 15 0.33 5 1 4 0 0 0 0
........................................................................TGACTTCTTTTTTAGACTTAGAACA.......................................................................................................................................................... 25 0 15 0.27 4 1 3 0 0 0 0
...............................................................................................CATAATATCTTCATAACGAGCACTCGGA................................................................................................................................ 28 0 15 0.27 4 1 3 0 0 0 0
.........................................................................................................TCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 25 0 15 0.27 4 2 2 0 0 0 0
.........................................................................................................TCATAACGAGCACTCGGATTTAAACCAAA..................................................................................................................... 29 0 15 0.27 4 1 3 0 0 0 0
......................................................................................................TCTTCATAACGAGCACTCGGATTTAAACC........................................................................................................................ 29 0 15 0.27 4 2 2 0 0 0 0
.................................................................................................TAATAACTTCATACCGAGCTCT.................................................................................................................................... 22 3 17 0.24 4 0 0 0 0 4 0
.........................................................................................TTAGAACATAATATCTTCATAACGAGCAC..................................................................................................................................... 29 0 15 0.20 3 2 1 0 0 0 0
...........................................................AACTGAATAGGTTTGACTTCTTTTT....................................................................................................................................................................... 25 0 15 0.20 3 1 1 1 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTC................................................................................................................................... 23 0 15 0.20 3 3 0 0 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTAGAC.................................................................................................................................................................. 27 0 15 0.20 3 2 1 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGATTTAA........................................................................................................................... 28 0 15 0.20 3 0 3 0 0 0 0
...................................................................................................................CACTCGGATTTAAACCAAATAATTTT.............................................................................................................. 26 0 15 0.20 3 3 0 0 0 0 0
..............................................TACAGTGCCGCTCAACTGAATAGGT.................................................................................................................................................................................... 25 0 15 0.20 3 1 0 2 0 0 0
...................................................................................................................CACTCGGATTTAAACCAAATAATTTTT............................................................................................................. 27 0 15 0.20 3 2 1 0 0 0 0
.................................................................................................TAATACCTTCATACCGAGCTCT.................................................................................................................................... 22 3 15 0.20 3 0 0 0 0 3 0
..................................................................................................AATATCTTCATAACGAGCACTCGGA................................................................................................................................ 25 0 15 0.20 3 3 0 0 0 0 0
............................................................................................GAACATAATATCTTCATAACGAGCAC..................................................................................................................................... 26 0 15 0.20 3 3 0 0 0 0 0
.....................................................................................................ATCTTCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 29 0 15 0.13 2 1 1 0 0 0 0
...............................................................................................CATAATATCTTCATAACGAGCACTCG.................................................................................................................................. 26 0 15 0.13 2 1 1 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCG.................................................................................................................................. 21 0 15 0.13 2 1 1 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTCG.................................................................................................................................. 24 0 15 0.13 2 1 1 0 0 0 0
.................................................................................................................................................................................................................................TCAAAAACATAGCTGAAAACCTA... 23 0 15 0.13 2 2 0 0 0 0 0
..................................................................................................AATATCTTCATAACGAGCACTCGG................................................................................................................................. 24 0 15 0.13 2 1 1 0 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTAGACC................................................................................................................................................................. 28 1 15 0.13 2 2 0 0 0 0 0
..........................................................................................................CATAACGAGCACTCGGATTTAAAC......................................................................................................................... 24 0 15 0.13 2 1 1 0 0 0 0
........................................................................................................TGCATAACGAGCACTCGGATTTAAACC........................................................................................................................ 27 1 15 0.13 2 2 0 0 0 0 0
..........................................................................................TAGAACATAATATCTTCATAACGAGC....................................................................................................................................... 26 0 15 0.13 2 1 0 1 0 0 0
..............................................................TGAATAGGGTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 1 15 0.13 2 0 2 0 0 0 0
......................................................................................................TCTTCATAACGAGCACTCGGA................................................................................................................................ 21 0 15 0.13 2 0 2 0 0 0 0
.................................................................................................................AGCACTCGGATTTAAACCAAATAATTTT.............................................................................................................. 28 0 15 0.13 2 2 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGATTTAAA.......................................................................................................................... 29 0 15 0.13 2 0 2 0 0 0 0
..........................................................................................................................................................GATCAATTCTTTATAAAATACAAAAGTT..................................................................... 28 0 15 0.13 2 2 0 0 0 0 0
.................................................................................................TAATATCTTCCTAACGAGCACTCGGA................................................................................................................................ 26 1 15 0.13 2 2 0 0 0 0 0
..............................................TACAGTGCCGCTCAACTGAATAGGTT................................................................................................................................................................................... 26 0 15 0.13 2 2 0 0 0 0 0
......................................................................................................TCTTCATAACGAGCACTCGGATTTAA........................................................................................................................... 26 0 15 0.13 2 0 2 0 0 0 0
........................................................................................................TTCATAACGAGCACTCGGATTTAAACCA....................................................................................................................... 28 0 15 0.13 2 0 2 0 0 0 0
.............................................................CTGAATAGGTTTGACTTCTTTTTTAGAC.................................................................................................................................................................. 28 0 15 0.13 2 2 0 0 0 0 0
.....................................................................................................ATCTTCATAACGAGCACTCGGATTTA............................................................................................................................ 26 0 15 0.13 2 0 2 0 0 0 0
..................................................................................................................................................................................AGTTTTTTTTTTTTTGGTTTGGTTT................................................ 25 0 13 0.08 1 0 1 0 0 0 0
.........................................................................................................................................................................................TTTTTTTTGGTTTGGTTTTTATATTT........................................ 26 0 14 0.07 1 1 0 0 0 0 0
...........................................................................................................................................................................................TTTTTTGGTTTGGTTTTTATATTTT....................................... 25 0 14 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTTCTTTTGGTTTGGTTTTTATAT.......................................... 24 1 14 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................................TTTTTGGTTTGGTTTTTATATTTTTTT.................................... 27 0 14 0.07 1 1 0 0 0 0 0
......................................................................................................................................................................................TTTTTTTTTTTGGTTTGGTTTT............................................... 22 0 14 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................................TTTTTTTGGTTTGGTTTTTATATTTT....................................... 26 0 14 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................................................TGTGGTTTGGTTTTTATATTTTTTT.................................... 25 1 14 0.07 1 1 0 0 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTATACT................................................................................................................................................................. 28 1 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................CGAAAACATAGCTGAAAACCT.... 21 1 15 0.07 1 1 0 0 0 0 0
.......................................................................TGGACTTCTTTTTTAGACT................................................................................................................................................................. 19 1 15 0.07 1 1 0 0 0 0 0
........................................................................................................TTCATAACGACCACTCGGATTTAAAC......................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
..............................................................................................................................AAACCAAATAATTTTTTTTAAGT...................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................TCTTCATAACGAGCACTCGGATTT............................................................................................................................. 24 0 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................AAAAAGATAGCTGAAAACC..... 19 1 15 0.07 1 1 0 0 0 0 0
..................................................................TAGTTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 24 1 15 0.07 1 1 0 0 0 0 0
..............................................................................................ACATAATATCTTCATAACGAGCACTCGG................................................................................................................................. 28 0 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................CCAATTCTTTATAAAATACAAAAGTT..................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
................................................................AATAGGTTTGACTTCTTTTTTAGACC................................................................................................................................................................. 26 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTTCAAAAACATAGCTGAAAACCTA... 27 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................TTCATAACGAGCACTCGGATTT............................................................................................................................. 22 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................CATAACGAGCACTCGGATTTAAACCAAA..................................................................................................................... 28 0 15 0.07 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................CTTTTTTCAAAAACATAGCTGAAAACC..... 27 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................ACAATTCTTTATAAAATACAAAAGTTT.................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTCGGAC............................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
...................................................................................................ATATCTTCATAACGAGCACTCGGAT............................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
.........................................................................................TTAGAACATAATATCTTCATAACGAG........................................................................................................................................ 26 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................TGTTCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 28 1 15 0.07 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................TTTCAAAAACATAGCTGAAAACC..... 23 0 15 0.07 1 1 0 0 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTAGA................................................................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................TTTATCAAAAACATAGCTGAAAACC..... 25 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................TAACGAGCACTCGGATTTAAACCAA...................................................................................................................... 25 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................TTATATCTTCATAACGAGCACTCGG................................................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
...........................................................................................................................................................CTCAATTCTTTATAAAATACAAAAGTT..................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGAA............................................................................................................................... 24 1 15 0.07 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................TGTTTTTTTCAAAAACATAGCTGAAAAC...... 28 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TGTTTTTTCAAAAACATAGCTGAAAACC..... 28 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATAACTTCATACCGAGCTCTC................................................................................................................................... 23 3 15 0.07 1 0 0 0 0 1 0
....................................................................................................TATCTTCAGAACGAGCACTCGGA................................................................................................................................ 23 1 15 0.07 1 0 1 0 0 0 0
................................................................................................ATAATATCTTCATAACGAGCA...................................................................................................................................... 21 0 15 0.07 1 0 0 0 1 0 0
..............................................................TAAATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 1 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCTCTCGGATT.............................................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TTTTTTTTCAAAAACATAGCTGAAAACC..... 28 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................CATAACGAGCACTCGGAT............................................................................................................................... 18 0 15 0.07 1 0 1 0 0 0 0
............................................................................................................................................................TCAATTCTTTATAAAGTACAAAAGTT..................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACT.................................................................................................................................... 22 0 15 0.07 1 1 0 0 0 0 0
.......................................................GCTCAACTGAATAGGTTTGACTTCTTTT........................................................................................................................................................................ 28 0 15 0.07 1 0 1 0 0 0 0
.............................................................................................AACATAATATCTTCATAACGAGC....................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................TTAATAACGAGCACTCGGATTTAAACC........................................................................................................................ 27 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................AACATAATATCTTCATAACGAGCAC..................................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
..................................................................................................AATATCTTCATAACAAGCACTCGGA................................................................................................................................ 25 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATACCTTCATACCGAGCTCTC................................................................................................................................... 23 3 15 0.07 1 0 0 0 0 1 0
.................................................................................................TAATATCTGCATAACGAGCACTCGGA................................................................................................................................ 26 1 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................AAACGATCAATTCTTTATAAAATACA........................................................................... 26 0 15 0.07 1 1 0 0 0 0 0
.............................................................................................GATCTAATATCTTCATAACGAGCACTCGG................................................................................................................................. 29 3 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCATAACGGGCACTCGGATTT............................................................................................................................. 26 1 15 0.07 1 0 1 0 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTAGT................................................................................................................................................................... 26 1 15 0.07 1 0 0 1 0 0 0
........................................................................................................TGAATAACGAGCACTCGGATTTAAACC........................................................................................................................ 27 2 15 0.07 1 1 0 0 0 0 0
................................................................................................................................................................................................................................TTCAAAAACATAGCTGAAAACCTACAT 27 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................TAGAACATAATATCTTCATAACGAGCACT.................................................................................................................................... 29 0 15 0.07 1 1 0 0 0 0 0
...................................................TGCCGCTCAACTGAATAGGTTTGACT.............................................................................................................................................................................. 26 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................................AGCACTCGGATTTAAACCGAATAATT................................................................................................................ 26 1 15 0.07 1 0 1 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGGTT.............................................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................................GGAAAACGATCAATTCTTTATAAAATACA........................................................................... 29 1 15 0.07 1 1 0 0 0 0 0
.......................................................................................................CTTCATAACGAGCACTCGGATT.............................................................................................................................. 22 0 15 0.07 1 0 1 0 0 0 0
........................................................................TGATTTCTTTTTTAGACTTAGAACA.......................................................................................................................................................... 25 1 15 0.07 1 1 0 0 0 0 0
..............................................................TTAATAGGTTTGACTTCTTTTTTAGAC.................................................................................................................................................................. 27 1 15 0.07 1 1 0 0 0 0 0
........................................................................TGACTTCTTTTTTAGACTTAGAACATA........................................................................................................................................................ 27 0 15 0.07 1 0 1 0 0 0 0
..................................................................TAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 24 0 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................GCAATTCTTTATAAAATACAAAAGTTT.................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTTGGATC.............................................................................................................................. 25 2 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CTTTTCAAAAACATAGCTGAAAACC..... 25 1 15 0.07 1 1 0 0 0 0 0
..............................................................TGATTAGGTTTGACTTCTTTTTTAGACC................................................................................................................................................................. 28 2 15 0.07 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................TTTTTTTCAAAAACATAGCTGAAAACC..... 27 0 15 0.07 1 1 0 0 0 0 0
..................................................................................................AATATCTTCATAACGAGCACTCGGATT.............................................................................................................................. 27 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................TTATATCTTCATAACGAGCACTC................................................................................................................................... 23 1 15 0.07 1 1 0 0 0 0 0
...............................................................................................CATAATATCTTCATAACGAGCACT.................................................................................................................................... 24 0 15 0.07 1 1 0 0 0 0 0
....................................................GCCGCTCAACTGAATAGGTTTGAC............................................................................................................................................................................... 24 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAAAGAGCACTCGGAT............................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAATGAGCACTCGGA................................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0 0
.....................................................................................................AGCTTCATAACGAGCACTCGGATT.............................................................................................................................. 24 1 15 0.07 1 1 0 0 0 0 0
................................................................................................CTAATATCTTCATAACGAGCACTC................................................................................................................................... 24 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................TTTTAAGTAAAACGATCAATTCTT...................................................................................... 24 0 15 0.07 1 1 0 0 0 0 0
.........................................................................................................GCATAACGAGCACTCGGATTTAAACC........................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATAACTTCATAACGAGCACTCGGA................................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCATAACGAGCACTCGGT................................................................................................................................ 23 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................TTTTTTTAAGTAAAACGATCAATTCTT...................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
..............................................................TGCATAGGTTTGACTTCTTTTTTAGAC.................................................................................................................................................................. 27 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................CATAACGAGCACTCGGATTTAAACCA....................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0
.....................................................................................................ATCTTCATAACGAGCACTCGGAT............................................................................................................................... 23 0 15 0.07 1 0 1 0 0 0 0
...........................................................................................................................................................ATCAATTCTTTATAAAATACAAAAGTTT.................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
..............................................................................................ACATAATATCTTCATAACGAGCACTCG.................................................................................................................................. 27 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCCCTCGGA................................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0 0
.......................................................................................................CTTCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 27 0 15 0.07 1 0 1 0 0 0 0
..........................................................................................TAGAACATAATATCTTCATAACGATCAC..................................................................................................................................... 28 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................CATAACGAACACTCGGATTTAAACCAAA..................................................................................................................... 28 1 15 0.07 1 0 1 0 0 0 0
..............................................................AGAATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 1 15 0.07 1 1 0 0 0 0 0
...................................................................................................................CGCTCGGATTTAAACCAAATAATTTTTT............................................................................................................ 28 1 15 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTCAAAAACATAGCTGAAAACCTACAT 29 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................TTCATAACGAGCACTCGGA................................................................................................................................ 19 0 15 0.07 1 1 0 0 0 0 0
........................................................................................................TGCATAACGAGCACTCGGATTT............................................................................................................................. 22 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................TCATAACGAGCACTCGGATTTAAACC........................................................................................................................ 26 0 15 0.07 1 1 0 0 0 0 0
...................................................................................................................CACTCGGATTTAAACCAAATAATTT............................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
..................................................................................................AATATCTTCATAACGAGCACTCG.................................................................................................................................. 23 0 15 0.07 1 1 0 0 0 0 0
..................................................................................................................GCACTCGGATTTAAACCAAATAATT................................................................................................................ 25 0 15 0.07 1 1 0 0 0 0 0
.............................................................CTGAATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 29 0 15 0.07 1 0 1 0 0 0 0
..............................................................TTCATAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 2 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATCACGAGCACTCGGAT............................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
..............................................TACAGTGCCGCTCAACTGAATAGG..................................................................................................................................................................................... 24 0 15 0.07 1 0 1 0 0 0 0
.............................................................................................AACATAATATCTTCATAACGAGCACTC................................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAAGATCTTCATAACGAGCACTCGGAT............................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAAGATCTTCATAACGAGCACTCGGA................................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0 0
....................................................................................................TACCTTCATAACGAGCACTCGGA................................................................................................................................ 23 1 15 0.07 1 1 0 0 0 0 0
...............................................................................................CATAATATCTTCAGAACGAGCACTCGG................................................................................................................................. 27 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAAAGAGCACTCGG................................................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................TTTTTTTTTCAAAAACATAGCTGAAAACC..... 29 0 15 0.07 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................TTCTCAAAAACATAGCTGAAAACCTA... 26 1 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCAGAACGAGCACTCGGATTT............................................................................................................................. 26 1 15 0.07 1 0 1 0 0 0 0
........................................................................TGACTTCTGTTTTAGACTTAGAACATAA....................................................................................................................................................... 28 1 15 0.07 1 0 1 0 0 0 0
....................................................................................................TATTTTCATAACGAGCACTCGGATTC............................................................................................................................. 26 2 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTTCAAAAACATAGCTAAAAACC..... 25 1 15 0.07 1 1 0 0 0 0 0
..................................................................................................AGTATCTTCATAACGAGCACTCG.................................................................................................................................. 23 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................TCATTTGTTTATAAAATACAAAAGTTT.................................................................... 27 2 15 0.07 1 1 0 0 0 0 0
..............................................................TTAATAGGTTTGACTTCTTTTTTAGACC................................................................................................................................................................. 28 2 15 0.07 1 1 0 0 0 0 0
......................................................................................................TCTCCATAACGAGCACTCGGATTT............................................................................................................................. 24 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................................................................TGTTTTCAAAAACATAGCTGAAAACC..... 26 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................................TTAAACCAAATAATTTTTTTTAAGT...................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
....................................................................................................................................................TAAAACGATCAATTCTTTATAAAATACA........................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
..............................................................TGATTAGGTTTGACTTCTTTTTTAGACT................................................................................................................................................................. 28 1 15 0.07 1 1 0 0 0 0 0
..............................................................................................................................................TTTAAGTAAAACGATCAATTCTTTAT................................................................................... 26 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................CATAACGAGCACTCGGATTTAAACC........................................................................................................................ 25 0 15 0.07 1 1 0 0 0 0 0
..............................................................TGAATAGGTTTGACTTCTTTTTTAG.................................................................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
....................................................................................................TATCTTCCTAACGAGCACTCGGATTA............................................................................................................................. 26 2 15 0.07 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................TTTCAAAAACATAGCTGAAAACCTACA. 27 0 15 0.07 1 0 1 0 0 0 0
............................................................................................................TAACGAGCACTCGGATTTAAACCAAA..................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0
..............................................................TTAATAGGTTTGACTTCTTTTTTAGA................................................................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
................................................................................................ATAATATCTTCATAACGAGCACTCGGAT............................................................................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................TAATATCTTCATAACGAGCACTCTGAA............................................................................................................................... 27 2 15 0.07 1 1 0 0 0 0 0
.........................................................................................TTAGAACATAATATCTTCATAACGAGC....................................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
............................................................................................GAACATAATATCTTCATAACGAGCACTC................................................................................................................................... 28 0 15 0.07 1 0 1 0 0 0 0
..........................................................................................TAGAACATAATATCTTCATAACGAGCA...................................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TCAAAAACATAGCTGAAAACCT.... 22 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TCAAAAACATAGCTGAAAACCTACAT 26 0 15 0.07 1 0 1 0 0 0 0
............................................................................................GAATATAATATCTTCATAACGAGCACT.................................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
.....................................................................................................ATCTTCATAACGAGCACTCGG................................................................................................................................. 21 0 15 0.07 1 0 1 0 0 0 0
...............................................................GAATAGGTTTGACTTCTTTTTTAGACC................................................................................................................................................................. 27 1 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................GATCAATTCTTTATAAAATACAAAAGT...................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................CAAAAACATAGCTGAAAACCT.... 21 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................TTTTCATAACGAGCACTCGGATTTAAAC......................................................................................................................... 28 1 15 0.07 1 1 0 0 0 0 0
................................................................................................CTAATATCTTCATAACGAGCACTCGGA................................................................................................................................ 27 1 15 0.07 1 1 0 0 0 0 0
.................................................AGTGCCGCTCAACTGAATAGG..................................................................................................................................................................................... 21 0 16 0.06 1 0 1 0 0 0 0
.................................................AGCGCCGCTCAACTGAATAGG..................................................................................................................................................................................... 21 1 16 0.06 1 0 0 0 0 0 1
.................................................................................................TAGGATCTTCATAACGAGCTCT.................................................................................................................................... 22 3 16 0.06 1 0 0 0 0 1 0
.................................................................................................TAATAACTTCATACCGTGCACT.................................................................................................................................... 22 3 16 0.06 1 0 0 0 0 1 0
.................................................AGTGCCGCTCAACTGAATAGGTTTG................................................................................................................................................................................. 25 0 16 0.06 1 0 1 0 0 0 0
.....................................................CCGCTCAACTGAATAGGTT................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................TTTGGTTTTTGGTTTGGTTTTTAT............................................ 24 2 20 0.05 1 0 1 0 0 0 0
......................................................CGCTCAACTGAATAGGTTTGA................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

ACTAAACGCCTCGTAGTAGTTCCCGATATTGTAGAAGGTCTATTATATGTCACGGCGAGTTGACTTATCCAAACTGAAGAAAAAATCTGAATCTTGTATTATAGAAGTATTGCTCGTGAGCCTAAATTTGGTTTATTAAAAAAAATTCATTTTGCTAGTTAAGAAATATTTTATGTTTTCAAAAAAAAAAAAACCAAACCAAAAATATAAAAAAAATAAAAAAAAAGTTTTTGTATCGACTTTTGGATGTA
********************************************************************************************************************************........((((....(((.((..((...(((........)))))..)).)))....))))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V106
head
 V055
head
..................................................CACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 22 0 16 5.63 90 82 4 4 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 23 0 16 5.06 81 57 21 2 1 0 0
.....................CCCGATATTGTAGAAGGTCTATTATAT........................................................................................................................................................................................................... 27 0 1 5.00 5 5 0 0 0 0 0
.....................CCCGATATTGTAGAAGGTCTATTAT............................................................................................................................................................................................................. 25 0 1 5.00 5 5 0 0 0 0 0
....................TCCCGATATTGTAGAAGGTCTATTAT............................................................................................................................................................................................................. 26 0 1 4.00 4 3 1 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 24 0 15 3.87 58 20 24 13 1 0 0
..............................................ATGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 26 0 15 3.13 47 18 24 4 1 0 0
...........................ATTGTAGAAGGTCTATTATATGTCAC...................................................................................................................................................................................................... 26 0 1 2.00 2 1 0 1 0 0 0
....................TCCCGATATTGTAGAAGGTCTATTATAT........................................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0
...........CGTAGTAGTTCCCGATATTGTAGAAG...................................................................................................................................................................................................................... 26 0 1 2.00 2 0 1 1 0 0 0
.....................CCCGATATTGTAGAAGGTCTATTATATGT......................................................................................................................................................................................................... 29 0 1 2.00 2 0 2 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 23 1 16 1.13 18 18 0 0 0 0 0
.....................CCCGATATTGTAGAAGGTCTATTATTTGG......................................................................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0 0
.......................CGATATTGTAGAAGATCTATTAT............................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0
......................CCGATATTGTAGAAGGTCTATTATAT........................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
............GTAGTAGTTCCCGATATTGT........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.............................TGTAGAAGGTCTATTATATGTCACGG.................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
......CGCCTCGTAGTAGTTCCCGATA............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.........................ATATTGTAGAAGGTCTATTATATGTCAC...................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0
.................AGTTCCCGATATTGTAGAAG...................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................TATTGTAGAAGGTCTATTATATGGC........................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
....................CCCCGATATTGTAGAAGGTCTATTA.............................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...........CGTGGTAGTTCCCGATATTGTAGAAG...................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
.....ACGCCTCGTAGTAGTTCCCGATAT.............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
....................TCCCGATATTGTAGAAGGTCTATT............................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
......CGCCTCGTAGTAGTTCCCGATATTTT........................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
..................GTTCCCGATATTGTAGAAGGTCTATTAC............................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0
......................CCGATATTGTAGAAGGTCTATTATA............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
...........CGTAGTAGTTTCCGATATTGTAGA........................................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.......GCCTCGTAGTAGTTCCCGATATTGTAG......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
..................ATTCCCGATATTGTAGAAGGTCTATTAT............................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
................TAGTTCCCGATATTGTAGAAGGTCTA................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
...................TTCCCGATATTGTAGAAGGTCTATTAT............................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
............GTAGTAGTTCCCGATATTGTAGA........................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
...AAACGCCTCGTAGTAGTTCCCGATATTGT........................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
......CGCCTCGTAGTAGTTCCCGATATTGT........................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............AGTAGTTCCCGATATTGTAGAAG...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........CTTAGTCGTTCCCTATATTGTAGAAG...................................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0
.......................CGATATTGTAGAAGGTCTATTATAT........................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........CCTCGTAGTAGTTCCCGATATTGTAGA........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0
......................CCGATATTGTAGAAGGTCTATTAT............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
.................AGTTCCCGATATTGTAGAAGGTCTATT............................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
....................CCCCGATATTGTAGAAGGTCTAGTAT............................................................................................................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
...............GTAGTTCCCGATATTGTAGCAG...................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...................CTCCCGATATTGTAGAAGGTCTA................................................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..................GTTCCCGATATTGTAGAAGGTCTATTAT............................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
.......................................CTATTATATGTCACGGCGAGTTGACT.......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............ATTATTTCCCGATATTGTAGAAGGTCT.................................................................................................................................................................................................................. 27 2 1 1.00 1 0 0 1 0 0 0
.....................CCCGATATTGTAGAAGGT.................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
......CGCCTCGTAGTAGTTCCCGATACTTT........................................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0
ACTAATTTCCTCGTAGTAGTTCCCGATATTGTAGA........................................................................................................................................................................................................................ 35 3 1 1.00 1 0 0 1 0 0 0
.........................ATATTGTAGAAGGTCTATTATATGT......................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
..............AGTAGTTCCCGATATTGTAGAAGGT.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.....................CCCGATATTGTAGAAGGTATATTATAT........................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
................TAGTTCCCGATATTGTAGAAGTTCT.................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
................CAGTTCCCGATATTGTAGAAGGTCT.................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
....................TCCCGGTATTGTAGAAGGTCTATTATATG.......................................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0
.............CAGTAGTTCCCGATATTGTAGA........................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...........CGTAGTAGTTCCCGATATTGTAGA........................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
........CCTCGTAGTAGTTCCCGATATTGT........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
....................TCCCGATATTGTAGAAGGTCTAT................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
.........CTCGTAGTAGTTCCCGATATTGTAGA........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0
............GTAGTAGTTCCCGATATTGTAGAAG...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
........CCTCGTAGTAGTTCCCGATATTGTAG......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............AGTAGTTCCCGATATTGTAGAAGGTC................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
...........CGTAGTAGTTCCCGATATTGTAGAAGGT.................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.....ACGCCTCGTAGTAGTTCCCGATATTGT........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
........CCTCGTAGTAGTTCCCGATATTGTAGAAG...................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
...............................................TGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 25 0 15 0.93 14 7 6 1 0 0 0
..................................................CACGGCGAGTTGACTTATCCAAACTG............................................................................................................................................................................... 26 0 4 0.75 3 3 0 0 0 0 0
.......................................................CGAGTTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 27 0 15 0.67 10 9 1 0 0 0 0
..................................................CACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 23 0 16 0.63 10 10 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAAACT................................................................................................................................................................................ 26 0 16 0.63 10 8 1 1 0 0 0
..................................................CACGGCGAGTTGACTTATCCAAACT................................................................................................................................................................................ 25 0 16 0.56 9 9 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 24 0 16 0.56 9 7 2 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAAACTG............................................................................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0 0
..........................................TTATATGTCACGGCGAGTTGACTTAT....................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 25 0 15 0.47 7 1 5 1 0 0 0
............................................ATATGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 28 0 9 0.44 4 0 4 0 0 0 0
.............................................TATGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 27 0 10 0.40 4 4 0 0 0 0 0
..................................................CACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 21 0 16 0.38 6 4 2 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCCAAACT................................................................................................................................................................................ 27 0 15 0.33 5 3 1 1 0 0 0
............................................ATATGTCACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 27 0 9 0.33 3 0 3 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 23 0 15 0.33 5 0 5 0 0 0 0
.........................................................AGTTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 25 0 15 0.27 4 0 0 4 0 0 0
.................................................CCACGGCGAGTTGACTTATCCAAACTG............................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAGCCTAAAT............................................................................................................................ 25 0 15 0.20 3 3 0 0 0 0 0
...............................................................................................GTATTATAGAAGTATTGCTCGTGAGCCT................................................................................................................................ 28 0 15 0.20 3 1 2 0 0 0 0
....................................................CGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 20 0 20 0.20 4 4 0 0 0 0 0
...............................................TGTCACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 24 0 15 0.20 3 0 2 1 0 0 0
.......................................................................................................................................................TTGCTAGTTAAGAAATATTTTATGTT.......................................................................... 26 0 15 0.20 3 1 0 0 2 0 0
....................................................CGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 21 0 20 0.20 4 0 1 0 2 1 0
........................................................GAGTTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 26 0 15 0.20 3 1 1 0 1 0 0
..................................................CACGGCGAGTTGACTTATTCAA................................................................................................................................................................................... 22 1 16 0.19 3 3 0 0 0 0 0
.....................................................GGCGAGTTGACTTATCCAAAC................................................................................................................................................................................. 21 0 20 0.15 3 0 2 0 0 0 1
...........................................TATATGTCACGGCGAGTTGACTTAT....................................................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0
....................................................................................................ATAGAAGTATTGCTCGTGAGCCTAAAT............................................................................................................................ 27 0 15 0.13 2 2 0 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAGCCTAAATT........................................................................................................................... 26 0 15 0.13 2 2 0 0 0 0 0
................................................GTCACGGCGAGTTGATTTATCCAA................................................................................................................................................................................... 24 1 15 0.13 2 0 2 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAGCCTAAATTT.......................................................................................................................... 27 0 15 0.13 2 0 1 0 1 0 0
........................................................................................................AAGTATTGCTCGTGAGCCTAAAT............................................................................................................................ 23 0 15 0.13 2 1 1 0 0 0 0
..............................................................................................................TGCTCGTGAGCCTAAATTTGGTTT..................................................................................................................... 24 0 15 0.13 2 1 1 0 0 0 0
..........................................................GTTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 24 0 15 0.13 2 1 1 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCAAA................................................................................................................................................................................... 24 1 15 0.13 2 2 0 0 0 0 0
....................................................CGGCGAGTTGACTTATCCAAACTG............................................................................................................................................................................... 24 0 15 0.13 2 1 1 0 0 0 0
..............................................ATGTCACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 25 0 15 0.13 2 0 2 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCAAA................................................................................................................................................................................... 23 2 16 0.13 2 2 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAAAC................................................................................................................................................................................. 25 0 16 0.13 2 2 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATTCAA................................................................................................................................................................................... 23 1 16 0.13 2 2 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCC..................................................................................................................................................................................... 21 0 16 0.13 2 0 1 0 1 0 0
.................................................TCACGGCGAGTTGACTTATCCGA................................................................................................................................................................................... 23 1 16 0.13 2 2 0 0 0 0 0
..................................................CACGGCGAGTTGACTTATCAAA................................................................................................................................................................................... 22 1 16 0.13 2 2 0 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCCAAACT................................................................................................................................................................................ 26 1 16 0.13 2 2 0 0 0 0 0
.................................................TCACGGCGAGTTGAATTATCCAA................................................................................................................................................................................... 23 1 16 0.13 2 0 2 0 0 0 0
.............................................AATGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 27 1 17 0.12 2 0 2 0 0 0 0
............................................ATATGTCACGGCGAGTTGACTTATC...................................................................................................................................................................................... 25 0 9 0.11 1 0 1 0 0 0 0
.................................................TAACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0
.............................................TATGTCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 28 0 10 0.10 1 1 0 0 0 0 0
.....................................................GGCGAGTTGACTTATCCAA................................................................................................................................................................................... 19 0 20 0.10 2 0 0 0 2 0 0
...................................................ACGGCGAGTTGACTTATCCAAACT................................................................................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0 0
.............................................TATGTCACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0
.........................................................................................................................................................................................AGAAAAAACCAAACCAAAA............................................... 19 1 20 0.10 2 2 0 0 0 0 0
..................................................................................................................................................................................TCAGAAAAAACAAAACCCAACCAAAAA.............................................. 27 3 13 0.08 1 1 0 0 0 0 0
................................................................................................................................................................................TTTCAAAAAAAAAAAAACCAAACCA.................................................. 25 0 13 0.08 1 1 0 0 0 0 0
...............................................................................................................................................................................................AACCAAAACAAAAATATAAAAAAAAAAAAAAAA........................... 33 2 14 0.07 1 0 0 1 0 0 0
......................................................................................................AGAAGTATTGCGCGTGAGCC................................................................................................................................. 20 1 15 0.07 1 0 1 0 0 0 0
....................................................................CCAAACTGAAGAAAAAATCTGAATCT............................................................................................................................................................. 26 0 15 0.07 1 1 0 0 0 0 0
.........................................................AGTTGACTGAGCCAAACTGAAGAAA......................................................................................................................................................................... 25 2 15 0.07 1 0 0 1 0 0 0
......................................................................................................................................................TTTGCTAGTTAAGAAATATTTTATGTT.......................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
...............................................CGTCACGGCGAGTTGACTTATCGA.................................................................................................................................................................................... 24 2 15 0.07 1 1 0 0 0 0 0
..............................................................................................TGTATTATAGAAGTATTGCTCGTG..................................................................................................................................... 24 0 15 0.07 1 0 0 1 0 0 0
................................................GTCACGGCGAGTTGAATTATCCAA................................................................................................................................................................................... 24 1 15 0.07 1 0 1 0 0 0 0
....................................................................................................ATAGAAGTATTGCTCGTGATC.................................................................................................................................. 21 1 15 0.07 1 1 0 0 0 0 0
.......................................................................................................GAAGTATTGCTCGTGAGCCTAAAT............................................................................................................................ 24 0 15 0.07 1 1 0 0 0 0 0
.......................................................................................GGAATCTTGTATTATAGAAGT............................................................................................................................................... 21 1 15 0.07 1 0 0 0 1 0 0
...............................................TGTCACGGCGAGGTGACTTAT....................................................................................................................................................................................... 21 1 15 0.07 1 0 1 0 0 0 0
..................................................................................AAATCTGAATCTTGTATTATAGAAGTATT............................................................................................................................................ 29 0 15 0.07 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................ATAAAAAAAAAGTTTTTGTATCGACTT......... 27 0 15 0.07 1 0 0 0 0 1 0
...............................................CGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 25 1 15 0.07 1 1 0 0 0 0 0
................................................GTCACGTCGAGTTGACTTATCCA.................................................................................................................................................................................... 23 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................................AAAATTCATTTTGCTAGTTAAGAA...................................................................................... 24 0 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................TGCTAGTTAAGAAATATTTTATGTTTT........................................................................ 27 0 15 0.07 1 1 0 0 0 0 0
...............................................TGTCACGGCGAGTTGATTTATCCAA................................................................................................................................................................................... 25 1 15 0.07 1 0 1 0 0 0 0
...............................................................................................GTATTATAGAAGTATTGCTCGTGAGC.................................................................................................................................. 26 0 15 0.07 1 0 1 0 0 0 0
..............................................ATGTCACGGCGAGTTGAGTTATCCAA................................................................................................................................................................................... 26 1 15 0.07 1 0 1 0 0 0 0
............................................................................................................ATTGCTCGTGAGCCTAAATT........................................................................................................................... 20 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAACCTAAATT........................................................................................................................... 26 1 15 0.07 1 0 1 0 0 0 0
.......................................................CGAGTTGACTTATCCAAACTGAAGAA.......................................................................................................................................................................... 26 0 15 0.07 1 1 0 0 0 0 0
.......................................................CGAGTTGACTTATCCAAACTGAAGAGA......................................................................................................................................................................... 27 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................CTGCTCGTGAGCCTAAATTTGGTTT..................................................................................................................... 25 1 15 0.07 1 1 0 0 0 0 0
................................................................................AAAAATCTGAATCTTGTATTATAGAAGT............................................................................................................................................... 28 0 15 0.07 1 0 0 0 1 0 0
.......................................................................................................................................................................................................................ATAAAAAAAAAGTTTTTGTATCGA............ 24 0 15 0.07 1 1 0 0 0 0 0
..............................................ATGTCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 27 0 15 0.07 1 0 1 0 0 0 0
.....................................................GGCGAGTTGACTTATCCAAACTG............................................................................................................................................................................... 23 0 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................................................................CCAAAAATATAAAAAGAATAAA............................... 22 1 15 0.07 1 1 0 0 0 0 0
...............................................CGTCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 26 1 15 0.07 1 1 0 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAGCCTAA.............................................................................................................................. 23 0 15 0.07 1 1 0 0 0 0 0
..............................................ATGTCACGGCGAGTTGACTTATCAAA................................................................................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
......................................................................................CTGAATCTTGTATTATAGAAGTAT............................................................................................................................................. 24 0 15 0.07 1 1 0 0 0 0 0
...................................................................TCCAAACTGAAGAAAAAATCTGAAT............................................................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
...............................................CGTCACGGCGAGTTGACTTATCCAT................................................................................................................................................................................... 25 2 15 0.07 1 1 0 0 0 0 0
................................................GCCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 24 1 15 0.07 1 1 0 0 0 0 0
.............................................................................................................TTGCTCGTGAGCCTAAATTTGGTTT..................................................................................................................... 25 0 15 0.07 1 0 1 0 0 0 0
.....................................................GGCGAGTTGACTTATCCAAACTGAAGA........................................................................................................................................................................... 27 0 15 0.07 1 0 1 0 0 0 0
........................................................CAGTTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
...............................................TGTCACGGCGAGTTGACTTATCC..................................................................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0 0
.............................................................................................TTGTATTATAGAAGTATTGCTCGTG..................................................................................................................................... 25 0 15 0.07 1 0 0 0 1 0 0
..............................................TTGTCACGGCGAGTTGACTTATTCAA................................................................................................................................................................................... 26 2 15 0.07 1 1 0 0 0 0 0
............................................................................................................ATTGCTCGTGAGCCTAAATTTGGTT...................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
.....................................................................................................................................TATTAAAAAAAATTCATTTTGCTAGTT........................................................................................... 27 0 15 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................AGTTTTTGTATCGACTTTTG...... 20 0 15 0.07 1 0 0 0 1 0 0
....................................................CGGCGAGTTGACTTATCCAAACTGAAGA........................................................................................................................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAGCCTAAATTTGG........................................................................................................................ 29 0 15 0.07 1 0 1 0 0 0 0
...............................................................................................................GCTCGTGAGCCTAAATTTGGT....................................................................................................................... 21 0 15 0.07 1 0 1 0 0 0 0
....................................................................CCAAACTGAAGAAAAAATCTGAATCTT............................................................................................................................................................ 27 0 15 0.07 1 1 0 0 0 0 0
...............................................TGTCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 26 0 15 0.07 1 0 1 0 0 0 0
..........................................................................................................................................................CTAGTTAAGAAATATTTTATGTTTTCAA..................................................................... 28 0 15 0.07 1 0 1 0 0 0 0
............................................................................................................................................AAAAATTCATTTTGCTAGTTAAGAAA..................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................................TGCTAGTTAAGAAATATTTTATGTTT......................................................................... 26 0 15 0.07 1 1 0 0 0 0 0
..........................................................................................................GTATTGCTCGTGAGCCTAAATTTGGTTT..................................................................................................................... 28 0 15 0.07 1 0 1 0 0 0 0
..............................................TTGTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCTAAA.................................................................................................................................................................................. 25 1 15 0.07 1 1 0 0 0 0 0
...............................................TGTCACGGCGAGTTGAGTTATCCAA................................................................................................................................................................................... 25 1 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................TTTGCTAGTTAAGAAATATTTTATG............................................................................ 25 0 15 0.07 1 1 0 0 0 0 0
................................................GTCACGGCTAGTTGACTTATCCAA................................................................................................................................................................................... 24 1 15 0.07 1 0 0 1 0 0 0
....................................................................CCAAACTGAAGAAAAAATCTGAATC.............................................................................................................................................................. 25 0 15 0.07 1 1 0 0 0 0 0
......................................................GCGAGTTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 28 0 15 0.07 1 0 1 0 0 0 0
..........................................................................................................GTATTGCTCGTGAGCCTAAATTTGGTT...................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0 0
...........................................................................................................................................AAAAAATTCATTTTGCTAGTTAAGAAA..................................................................................... 27 0 15 0.07 1 0 1 0 0 0 0
.............................................................................AGAAAAAATCTGAATCTTGTA......................................................................................................................................................... 21 0 15 0.07 1 0 0 0 0 1 0
......................................................................................CTGAATCTTGTATTATAGAAGTATTGCT......................................................................................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
..............................................ATGTCACGGCGAGTTGAATTATCCAA................................................................................................................................................................................... 26 1 15 0.07 1 0 1 0 0 0 0
......................................................................................................................................................TTTGCTAGTTAAGAAATATTTTAGG............................................................................ 25 1 15 0.07 1 1 0 0 0 0 0
................................................GTCACGGCGAGTTGACTTATCCAAAC................................................................................................................................................................................. 26 0 15 0.07 1 0 1 0 0 0 0
........................................................................ACTGAAGAAAAAATCTGAATCTTGTAT........................................................................................................................................................ 27 0 15 0.07 1 0 0 0 1 0 0
....................................................................................................ATAGAAGTATTGCTCGTG..................................................................................................................................... 18 0 15 0.07 1 1 0 0 0 0 0
.......................................................CGAGCTGACTTATCCAAACTGAAGAAA......................................................................................................................................................................... 27 1 15 0.07 1 0 0 1 0 0 0
...................................................................................................TATAGAAATATTGCTCGTGAGCCTAA.............................................................................................................................. 26 1 15 0.07 1 1 0 0 0 0 0
.....................................................GGCGAGTTGACTTATCCAAACGG............................................................................................................................................................................... 23 1 15 0.07 1 1 0 0 0 0 0
............................................................................................................ATTGCTCGTGAGCCTAAATTTGGTTTA.................................................................................................................... 27 0 15 0.07 1 0 1 0 0 0 0
......................................................................................................AGAAGTATTGCTCGTGAGCCTAAAGT........................................................................................................................... 26 1 15 0.07 1 1 0 0 0 0 0
...............................................TGTCACGGTGAGTTGACTTATCCAA................................................................................................................................................................................... 25 1 15 0.07 1 0 0 1 0 0 0
.................................................................TATCCAAACTGAAGAAAAAATCTGAAT............................................................................................................................................................... 27 0 15 0.07 1 0 0 1 0 0 0
...............................................TGTCACGGCGAGTTGACTTATTCAA................................................................................................................................................................................... 25 1 15 0.07 1 1 0 0 0 0 0
..................................................................ATCCAAACAGAAGAAAAAA...................................................................................................................................................................... 19 1 16 0.06 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AAAACAAAGTTCTTGTATCGA............ 21 2 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGTCTTATCCA.................................................................................................................................................................................... 22 1 16 0.06 1 0 1 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAAC.................................................................................................................................................................................. 24 1 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGAGTTATCCAA................................................................................................................................................................................... 23 1 16 0.06 1 0 1 0 0 0 0
..................................................CACGGCGAGTTGACTTATC...................................................................................................................................................................................... 19 0 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGATTTATCCAA................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 24 1 16 0.06 1 1 0 0 0 0 0
.................................................CCACGGCGAGTTGACTTATTCAA................................................................................................................................................................................... 23 2 16 0.06 1 1 0 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCGA.................................................................................................................................................................................... 22 2 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCTTA................................................................................................................................................................................... 23 2 16 0.06 1 1 0 0 0 0 0
..................................................CACGGCGAGTTGACTTATCCCA................................................................................................................................................................................... 22 1 16 0.06 1 1 0 0 0 0 0
.................................................TCCCGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 24 1 16 0.06 1 1 0 0 0 0 0
..................................................CACGGCGAGTCGACTTATCCAA................................................................................................................................................................................... 22 1 16 0.06 1 1 0 0 0 0 0
.................................................TCATGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTAT....................................................................................................................................................................................... 19 0 16 0.06 1 1 0 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCCAT................................................................................................................................................................................... 23 2 16 0.06 1 1 0 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCCGA................................................................................................................................................................................... 23 2 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCAT................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCAAA................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0
..................................................CACGGTGAGTTGACTTATCCAA................................................................................................................................................................................... 22 1 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTCGACTTATCCAA................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATC...................................................................................................................................................................................... 20 0 16 0.06 1 1 0 0 0 0 0
..................................................CACGGCGAGTTGACTTAGCCA.................................................................................................................................................................................... 21 1 16 0.06 1 1 0 0 0 0 0
.................................................TCACGGCGAGTTGACTTATCCA.................................................................................................................................................................................... 22 0 16 0.06 1 0 1 0 0 0 0
.................................................CCACGGCGAGTTGACTTATCCAAAC................................................................................................................................................................................. 25 1 16 0.06 1 1 0 0 0 0 0
...............................................TTTCACGGCGAGTTGACTTATCCAA................................................................................................................................................................................... 25 1 16 0.06 1 0 1 0 0 0 0
.................................................TCACAGCGAGTTGACTTATCCAA................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................AAAAAAAAAGTTCTTGTAT............... 19 1 17 0.06 1 0 0 1 0 0 0
................................................................TTATCCGAACTGAAGAAAATAA..................................................................................................................................................................... 22 3 18 0.06 1 0 0 0 0 1 0
.........................................................................................................................................................................................AAAAAAAAAGAAACCAAGAATATAAA........................................ 26 3 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................AAAAAAAAAAAACCAAAC.................................................... 18 0 20 0.05 1 1 0 0 0 0 0
................................................GTAACGGCGAGTTGACTTATCAAA................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................AAAAAAAAAACCAACCCAAAA............................................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................AAAAACAACCAAACCAAAA............................................... 19 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................AGAAGAAAACCAAACCAAAA............................................... 20 2 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................AAAAAAAAACGAAACCAAAAA.............................................. 21 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................AACAAAACAACCAAACCAAAAA.............................................. 22 2 20 0.05 1 0 0 1 0 0 0
.....................................................................................................................................................................................AAAAAAAAAAAACCAAAGCAAAA............................................... 23 1 20 0.05 1 1 0 0 0 0 0
...................................................ACGGCGAGTTGACTTATCCAAA.................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 1 0 0
.........................................................................................................................................................................................AAAAAAAACCAAACCAACAA.............................................. 20 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................TTTGCTAGTTTAAAAATATTT................................................................................ 21 2 20 0.05 1 0 0 0 1 0 0
.........................................................................................................................................................................................ACAAAAAACCAAACCAAAA............................................... 19 1 20 0.05 1 1 0 0 0 0 0
....................................................CGGCGAGTTGACTTATTCAA................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................CAAGAAAAAACCAAACCAAAAA.............................................. 22 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................AAATAAAAAACCAAACCAA................................................. 19 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................ACCAACCCAACAATATAA......................................... 18 2 20 0.05 1 1 0 0 0 0 0
....................................................CGGCGAGTTGACTTATCCTA................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................AACAGCTCGTGAGCCTAAAT............................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................AAATATCAAAACAATAAGAAAAAAGT....................... 26 3 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................ATAAAAAAAGTTCTTGTATGG............. 21 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................AAAAAAAAAAAAACCAAAGCA.................................................. 21 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................AGCAAAAAAAACCAAACCAAAAA.............................................. 23 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................AAAAAAGAAAAAACCAAACGAAATA.............................................. 25 3 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AAAAAAAAGTTCTTGTAT............... 18 1 20 0.05 1 1 0 0 0 0 0
....................................................................CCAAACTAAAGAAAAAATGG................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
...................................................................TCCAGACTGCAGAAGAAAT..................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................................................................................................................AAAAAGAAAGTTCTTGTATTGA............ 22 3 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................................AAAAAAAAAACCAAAGCAAAAA.............................................. 22 1 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:9462594-9462844 + dan_622 TGATTTGCG-----GAGCATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCAC------------------------TCGGATTTAAACCAAATAATTTTTTTTAAG--TAAAACGATCA--------ATTCTTTATAAAATACAA-AAGTTT-TTTTTTTTTT----------GGTTT---GGTTTTTA-TA-TTTTTTTTA-TTT-TTTTTT-CAAAAACATAG----CTGAAAACCTACAT
droBip1 scf7180000396337:37563-37767 + ---------------------------------------------------------------------------------------------------------------------------------------TACAGTGCCGCTCAACTGAATAGGTTTGACATTTGGTTAAGGTTTGAATCGTTGTAACTCTGTAACAAGAGC------------------------TCCGATTTTCTCGAAATAAGTTTCGATGTA--TAAAGAAATCT--------GTGTTTTATAAAATAGCA--AGTTT-CTGTTCTGTT----------CGTTT---TGTTTTTA-TA-TTATTTTTA-TTAATTTTTT-CAAAAATATAA----CAAAAAATGCCAAT
droKik1 scf7180000302660:223693-223902 + TGA----------------------------------------------------------------------------------------------------------------------------------AATACAGTGCCGCTCAACTGAATAGGTTTGACTTTTCTTTTAAGTTTGAAACGGTGTATCTCTGCAACAAGCCC------------------------TCCGATTTGATCGAAATAAATTTTTTTGTA--TAAAGAAAACT--------GTCTTTTGTGAAATAATA-AAAATT-GTGTCTTGTC----------GGGTT---TGTTGTTA-TA-TTATTTTTA-TTA-TTTTTT-CAAAAACATAA----CAAAATGGCTGCAT
droFic1 scf7180000452451:9665-9927 + CCACTTGCG-----CAGCACAATCCAGCCCTTTCTCTTTTAAACTTTAACGTACT-----------------------------------------------------------GCAA-----------TATCGGTACACTGCCGCTCAACTGAATAGGTTCATGCTCTCAGAGGAAGTAATTTGTCTATAATTTCTAAACCAGTGT------------------------ACCGATTTCC--AAAATTTTTTTTCTTTAA--CTCTTGAATCA--------TTTTATAATAAAATGCTG-AAGAAG-GTTTTTCAAA----------AACAT---ATTATTTA-TT-CCTTATTTA-ATT-TTTCTT-CTGAAAGGTTA----ACAAAATTCATGGT
droEle1 scf7180000491104:384693-384750 + GAT------TGAAG---CAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAGCACGA-ATAATT-ATTTTCTTTT----------AGTAT---ACTTTTTA-TG-CTTT----------------------------------------------
droRho1 scf7180000765624:6021-6254 + ACA------CCAT-----------------------------------------------------------------------------------------------------CCATATACATATACATATAGATACACTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCAC------------------------TCGGATTTAAACCAAATAAATTTTTTTAAG--TAAAACGATCA--------ATTCTTTATAAAATACTAAAAGTTT-TTTTTTTTTT----------GGTTT---GGTTTTTA-TA-TTTTTTTTA-TCT-TTTTTT-CAAAAACATAA----CTGAAAACCTACAT
droBia1 scf7180000302125:34060-34214 - TTA------AAACA---TCA-----------------------------------TTCTTAAAGAATGTCCGAATTAAAAAAAAATTGTAAAAGGGACAACTTTATCGTACACT---------------------------ACTGCTCTTGTG--------------------------------------------TTAGACGCAC------------------------TCAGTTTTCC--------------------------------------------------------------------------------------------------ACACA-AA-TTTGTTTTA-TTT-TTATTC-AAAAAAA-AAAAAATTCAAAAACCTTGGT
droTak1 scf7180000412988:24416-24604 - TTT------AAAAT---CCT-----------------------------------TT---------------------------------------------------------------------------------------------TTAAAATGGTGTGAT----------------------AGTATCATAAAAATTAGATATCGTTTTGAGACCATGAAGAAAATCTCGAT---------------------ACG--TTTCACAAAGA--------ATCACTCATATGTGCATC-GAGTATTT-TGT---TTTGTTTTTTTTTAACTCCTGCATGTTA-CA-T-TTTTATA-TTA-TTTTTT-TATGTAGGTAG-------TAAATGTAC-A
droEug1 scf7180000408984:488301-488492 + TAA------C----------------------------------------------------------------------------------------------------------------------------ATACACTTATGGACAAAATAATAGGTGTGTTTTATTTTTCATTTTTAACTTTTTATTTCTAAGTCATGCTTTC------------------------TCCAATCAGCTTAAAACAAAGTTTTTTTAA--AACGTATATTA--------ATTGTCTTTAAAAGAAAA-AAGAAA-CAATACTATA----------AACCT---TATCATTAACA-ACAGAAGTA-GAT-TTTT------------------------TCCTAAAT
dm3 chr3R:403069-403297 - ACC------AAAGA---CAT--------------------------TAGAATAT----------------------------------------------------------------------------TCAAATACAGTGCCGTTCAACTGAATAGGTTTGACTATTTGTTTAGGTTTGAACCGTTGTAACTAGGTTATATGCAA------------------------TCCAATTTAAGCGAAATAAATTTTTATGTA--TGAATAGATCA--------GTCATTTGTTTAATAGCA-AAGTTT-CTGATCTCTT----------AAATT---TGTTTTTA-TA-TCATTTTTA-TTT-TTTTTT-CAAAAACATAA----CAAAAAATCGTCAT
droSim2 2r:3122185-3122340 + AC------------------------------------------------------------------------------------------------------------------------------------ATACAGTGCCGATCAACTGAATAGGTTTGACTTATTTT--AATTT--------TATATATACATTAAA---------------------------------------------------------------------TAATTTTAAA-TATCCGTATAAAACAAAA-TAGATT-TTGATTTAT--------------AT---AGAAATCA-TA-C-ATTTTTA-CTA-TTTTTTTAAAAAAC--AA----CAAACATTTTCCGT
droSec2 scaffold_40:225358-225528 - TT--------------------------------------------------------------------------------------------------------------------------------------------------GACTGAATAGGTTTGACTTCATT--AATGTTCGAAACGTCGTATCTCCGCAAAGAAAAC------------------------ACATATTAT----------TTTTTGA------AAAAAAGAAAT--------GTCATTTATTTAATAGAA-TATATT-C-----TGTT----------ATTTG---TGTCCTTA-TG-TTATTATTA-TTA-TATTTC-CTACAAC--AG----CAAAGCATCTCCAT
droYak3 v2_chr3h_random_002:529867-530053 - AT------------------------------------------------------------------------------------------------------------------------------------GTACAGTGCCTCTCAACTAAATAGGTTTGACTTTTTTC--------AAATCATGATTTT--TTTCT------------------CCATAAAGGGAATTCCGATTTAA-----ATAAATATTGTTGTA--TAAAGAATACT--------GTTATTTTTGAAATAGCA-AAGTTT-TGGTTCTGTT----------AGTTT---TGTTTTTA-T-------------TA--TTATT-CAAAAACGTAA----AACAAAATGTCCTT
droEre2 scaffold_4845:2698823-2698972 - AC------------------------------------------------------------------------------------------------------------------------------------ATACAGTGCCGCTCAACTGAATAGGTTTGAGTTTTTTT-AATTTTCAAAAC-----------------------------------------------------------------------------------CTATCT------ATGTCATTTTTAAAATAGCA-AAGTTT-TGGTTCTGCT----------AGTTT---CTTTATTA-AA-GGAGTTTTG-ATA-TTTTTT-TAAAAAC--AA----CAAAAAATTGGCAT
dp5 Unknown_group_237:7935-8176 + GCG------GACC-----AATGTAAGCTGA--------------CAGACCATATT-----------------------------------------------------------C---------------TGATATACAGTGCCGCTCAACTAAATAGGTTCAACAATTTTC-AAAAGTCAAACCGCTATATCTTTTTAACCAACTT------------------------ACCGATTTATTTGAAATAATTTTTTTTTGGCATAGATTGATTC--------ATTGTTAATATGGCAAGA-AAGTTT-GTGGTTTCCA----------GGACA---CGTTT-TA-AA-TGCTATTTA-TGAATTTTTT-CAAAAACATTA----CAAAAAATGCCTAT
droPer2 scaffold_1:8009091-8009343 + TCA------ATAAAAAGCACAATATT----------CCTTAAAGT---CCAGTTT-----------------------------------------------------------TGAA-----------AGATTATACAGCGCCGCTCAACTGAATAGGTTCAACAATTTTC-AAAAGTCAAACCGCTATATCTTTTTAACCAACTT------------------------GCCGATTTATATGAAATATTTTTTTTTTTGTATAGATTAATTC--------GTTGTTAATATAGCAAGA-AATTTA-GTTGTTTCCA----------GGACA---CGTTTTTA-AA-GACTGTTTA-TTAATTTTTT-CAAAACTATCA----CAAAATAGCCTATT
droWil2 scf2_1100000004585:1861816-1862046 - CTA------TATTA---TCA----------------------------------T-----------------------------------------------------------CCATTTAT-------ATTATATAGAGTACCGCTCATCTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAAGGAGCAC------------------------TCGGATTTAAACCAAATAAATTTTGTTAAG--TAAATCGATCA--------ATTATTTATAAAATACAA-ACGTTT-TTTTCTTTTG----------GGTTT---GGTTTTAA-TA-TGTTTTTTA-TTA-TATTTT-CAAAAACATAG----CTGAAAATCTACCT
droVir3 scaffold_12954:148052-148252 + -----------------------------------------------------------------------------------------------------------------------------------------CAGTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCAC------------------------TCGGATTTAAACCAAATAAATTTTGTTAAG--TAAAACGATCA--------ATTATTTATAAAATACAA-AAGTTT-TTTGT---TT----------GGTTT---GGTTTTTA-TA-TTTTTTTTTATTA-TATTTT-CAAAAACATAA----CTGAAAATCTACAT
droMoj3 scaffold_6680:21598021-21598191 - A--------------------------------------------------------------------------------------------------------------------------------------TACAGTGCCACTCACTTGAATAGGTTTGATTTCTGG--AAAATTAAAAATATTATATCTCATTAACGAATGC------------------------TATAATTTA-------------TTGTTTTA--TTAAA----AA--------ATCATTTATGACGATCGA-TAGTTA-CAGGTCTGTA----------A-TTT---TGCATTAA-TTACATTTTTTA-TTGATTTTCT-CAA-AA--------------------TAT
droGri2 scaffold_15116:940346-940428 - AAA------TAATT---TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAA--TATACAAAAAA--------AAACTTTTAAAAATTCTT-AAGTTT-TTTTTTTTTC----------AAATT---AAATTATA-TG-AAT--------------------------------------------TTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGATTTGCG-----GAGCATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCAC------------------------TCGGATTTAAACCAAATAATTTTTTTTAAG--TAAAACGATCA--------ATTCTTTATAAAATACAA-AAGTTT-TTTTTTTTTT----------GGTTT---GGTTTTTA-TA-TTTTTTTTA-TTT-TTTTTT-CAAAAACATAG----CTGAAAACCTACATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................TAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCC..............................................................................................................................................................................................................................................................2819.009270000
...................TCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------A............................................................................................................................................................................................................................................................................2717.007061000
.GATTTGCG-----GAGCATCATCAAGGGC--------------..................................................................................................................................................................................................................................................................................................................................................................2415.005211010
....................CATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------A............................................................................................................................................................................................................................................................................2614.004211000
...................................................TCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCTC..........................................................................................................................................................................................................................................................2714.004220000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................26153.47528440000
..................................................................................................................CCAG-----------ATAATATACAGTGCCGCTCAAC.......................................................................................................................................................................................................................................................2613.003030000
..............................................TAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGC...............................................................................................................................................................................................................................................................2713.003030000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATT................................................................................................................................................................25152.603917202000
.......................................................................................................................................................TGAATAGGTTTGACTTCTTTTTTAGACT...........................................................................................................................................................................................................................28152.073111191000
.....................................................TT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCTCAAC.......................................................................................................................................................................................................................................................2812.002020000
.................................................CATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCC..............................................................................................................................................................................................................................................................2512.002020000
...................................................TCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGC............................................................................................................................................................................................................................................................2512.002110000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TCGG...................................................................................................................................................................25151.47227150000
.................................................................................................................................................................................................TTCATAACGAGCAC------------------------TCGGATTTAAACC..........................................................................................................................................................27151.47224161001
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TCGGATT................................................................................................................................................................28151.13177100000
.................CATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CC..........................................................................................................................................................................................................................................................................................2611.001010000
.......CG-----GAGCATCATCAAGGGC--------------TATAACATC.........................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................TAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGT.................................................................................................................................................................................................................................................................2511.001010000
..................ATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCA.........................................................................................................................................................................................................................................................................................2611.001100000
............................................TATAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGT.................................................................................................................................................................................................................................................................2711.001010000
....................CATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------.............................................................................................................................................................................................................................................................................2511.001100000
.....................................................TT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCTC..........................................................................................................................................................................................................................................................2511.001010000
....................................................CTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCTCA.........................................................................................................................................................................................................................................................2711.001010000
.............................................ATAACATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCC..............................................................................................................................................................................................................................................................2911.001010000
.....TGCG-----GAGCATCATCAAGGGC--------------TATAT.............................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................CATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------C...........................................................................................................................................................................................................................................................................................2511.001100000
.....................ATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------AT...........................................................................................................................................................................................................................................................................2611.001100000
..ATTTGCG-----GAGCATCATCAAGGT.................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......GCG-----GAGCATCATCAAGGGC--------------TATAACA...........................................................................................................................................................................................................................................................................................................................................................2611.001100000
....TTGCG-----GAGCATCATCAAGGGC--------------..................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................CATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------A............................................................................................................................................................................................................................................................................2911.001100000
....................................................................................................................AG-----------ATAATATACAGTGCCGCTCAAC.......................................................................................................................................................................................................................................................2411.001010000
...TTTGCG-----GAGCATCATCAAGGGC--------------TATAAC............................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............GAGCATCATCAAGGGC--------------TATAACATCT........................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................27151.00155100000
.................................................CATCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGC............................................................................................................................................................................................................................................................2711.001010000
...............AGCATCATCAAGGGC--------------TATAACATCT........................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................................................TCTT-----------------------------------------------------------CCAG-----------ATAATATACAGTGCCGCT...........................................................................................................................................................................................................................................................2611.001100000
TGATTTGCG-----GAGCATCATCAAGGGC--------------..................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....TGCG-----GAGCATCATCAAGGGC--------------TATAACA...........................................................................................................................................................................................................................................................................................................................................................2711.001100000
.GATTTGCG-----GAGCATCATCAAGGGC--------------TA................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...TTTGCG-----GAGCATCATCAAGGGC--------------TAT...............................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................ATCATCAAGGGC--------------TATAACATCTT-----------------------------------------------------------CCAG-----------A............................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................TCA--------ATTCTTTATAAAATACAA-AAGTTT-..........................................................................................27150.93140140000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................23150.8713850000
...................................................................................................................................................................................TAGAACATAATATCTTCATAACGAGCAC------------------------.......................................................................................................................................................................28150.6710280000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATTTA..............................................................................................................................................................27150.67101000000
...............................................................................................................................................................................................TCTTCATAACGAGCAC------------------------TCGGATTTAAAC...........................................................................................................................................................28150.6710370000
.................................................................................................................................................................................................TTCATAACGAGCAC------------------------TCGGATTTAAAC...........................................................................................................................................................26150.538260000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATTT...............................................................................................................................................................26150.538620000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................24150.477250000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATC................................................................................................................................................................25150.477070000
...............................................................................................................................................................................................................................................................................TCA--------ATTCTTTATAAAATACAA-AAGTT............................................................................................26150.477070000
...........................................................................................................................................................................................................................................................................................................................................................................TTTTT-CAAAAACATAG----CTGAAAACC.....25150.406150000
........................................................................................................................................................GAATAGGTTTGACTTCTTTTTTAGACT...........................................................................................................................................................................................................................27150.406420000
...............................................................................................................................................................................................TCTTCATAACGAGCAC------------------------TCGGATTTAAA............................................................................................................................................................27150.335410000
.................................................................................................................................................................TGACTTCTTTTTTAGACTTAGAACA....................................................................................................................................................................................................................25150.274310000
........................................................................................................................................................................................CATAATATCTTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................28150.274310000
..................................................................................................................................................................................................TCATAACGAGCAC------------------------TCGGATTTAAAC...........................................................................................................................................................25150.274220000
..................................................................................................................................................................................................TCATAACGAGCAC------------------------TCGGATTTAAACCAAA.......................................................................................................................................................29150.274310000
...............................................................................................................................................................................................TCTTCATAACGAGCAC------------------------TCGGATTTAAACC..........................................................................................................................................................29150.274220000
..................................................................................................................................................................................TTAGAACATAATATCTTCATAACGAGCAC------------------------.......................................................................................................................................................................29150.203120000
....................................................................................................................................................AACTGAATAGGTTTGACTTCTTTTT.................................................................................................................................................................................................................................25150.203111000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TC.....................................................................................................................................................................23150.203030000
.......................................................................................................................................................TGAATAGGTTTGACTTCTTTTTTAGAC............................................................................................................................................................................................................................27150.203120000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATTTAA.............................................................................................................................................................28150.203300000
............................................................................................................................................................................................................CAC------------------------TCGGATTTAAACCAAATAATTTT................................................................................................................................................26150.203030000
.......................................................................................................................................TACAGTGCCGCTCAACTGAATAGGT..............................................................................................................................................................................................................................................25150.203012000
............................................................................................................................................................................................................CAC------------------------TCGGATTTAAACCAAATAATTTTT...............................................................................................................................................27150.203120000
...........................................................................................................................................................................................AATATCTTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................25150.203030000
.....................................................................................................................................................................................GAACATAATATCTTCATAACGAGCAC------------------------.......................................................................................................................................................................26150.203030000
..............................................................................................................................................................................................ATCTTCATAACGAGCAC------------------------TCGGATTTAAAC...........................................................................................................................................................29150.132110000
........................................................................................................................................................................................CATAATATCTTCATAACGAGCAC------------------------TCG....................................................................................................................................................................26150.132110000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCG....................................................................................................................................................................21150.132110000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TCG....................................................................................................................................................................24150.132110000
...............................................................................................................................................................................................................................................................................................................................................................................T-CAAAAACATAG----CTGAAAACCTA...23150.132020000
...........................................................................................................................................................................................AATATCTTCATAACGAGCAC------------------------TCGG...................................................................................................................................................................24150.132110000
.......................................................................................................................................................TGAATAGGTTTGACTTCTTTTTTAGACC...........................................................................................................................................................................................................................28150.132020000
...................................................................................................................................................................................................CATAACGAGCAC------------------------TCGGATTTAAAC...........................................................................................................................................................24150.132110000
...................................................................................................................................................................................TAGAACATAATATCTTCATAACGAGC.................................................................................................................................................................................................26150.132011000
...............................................................................................................................................................................................TCTTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................21150.132200000
..........................................................................................................................................................................................................AGCAC------------------------TCGGATTTAAACCAAATAATTTT................................................................................................................................................28150.132020000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATTTAAA............................................................................................................................................................29150.132200000
.............................................................................................................................................................................................................................................................................GATCA--------ATTCTTTATAAAATACAA-AAGTT............................................................................................28150.132020000
.......................................................................................................................................TACAGTGCCGCTCAACTGAATAGGTT.............................................................................................................................................................................................................................................26150.132020000
...............................................................................................................................................................................................TCTTCATAACGAGCAC------------------------TCGGATTTAA.............................................................................................................................................................26150.132200000
.................................................................................................................................................................................................TTCATAACGAGCAC------------------------TCGGATTTAAACCA.........................................................................................................................................................28150.132200000
......................................................................................................................................................CTGAATAGGTTTGACTTCTTTTTTAGAC............................................................................................................................................................................................................................28150.132020000
..............................................................................................................................................................................................ATCTTCATAACGAGCAC------------------------TCGGATTTA..............................................................................................................................................................26150.132200000
..............................................................................................................................................................................................................................................................................................................AGTTT-TTTTTTTTTT----------GGTTT---GGTTT.........................................................25130.081100000
......................................................................................................................................................................................................................................................................................................................TTTTTTTT----------GGTTT---GGTTTTTA-TA-TTT...............................................26140.071010000
........................................................................................................................................................................................................................................................................................................................TTTTTT----------GGTTT---GGTTTTTA-TA-TTTT..............................................25140.071010000
.........................................................................................................................................................................................................................................................................................................................TTTTT----------GGTTT---GGTTTTTA-TA-TTTTTTT...........................................27140.071010000
..................................................................................................................................................................................................................................................................................................................T-TTTTTTTTTT----------GGTTT---GGTTTT........................................................22140.071010000
.......................................................................................................................................................................................................................................................................................................................TTTTTTT----------GGTTT---GGTTTTTA-TA-TTTT..............................................26140.071010000
...............................................................................................................................................................................................................................................AAACCAAATAATTTTTTTTAAG--T......................................................................................................................................23150.071010000
...............................................................................................................................................................................................TCTTCATAACGAGCAC------------------------TCGGATTT...............................................................................................................................................................24150.071010000
.......................................................................................................................................................................................ACATAATATCTTCATAACGAGCAC------------------------TCGG...................................................................................................................................................................28150.071010000
.........................................................................................................................................................AATAGGTTTGACTTCTTTTTTAGACC...........................................................................................................................................................................................................................26150.071010000
...........................................................................................................................................................................................................................................................................................................................................................................TTTTT-CAAAAACATAG----CTGAAAACCTA...27150.071010000
.................................................................................................................................................................................................TTCATAACGAGCAC------------------------TCGGATTT...............................................................................................................................................................22150.071010000
...................................................................................................................................................................................................CATAACGAGCAC------------------------TCGGATTTAAACCAAA.......................................................................................................................................................28150.071100000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------TCGGAC.................................................................................................................................................................27150.071010000
............................................................................................................................................................................................ATATCTTCATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................25150.071010000
..................................................................................................................................................................................TTAGAACATAATATCTTCATAACGAG..................................................................................................................................................................................................26150.071010000
.............................................................................................................................................................................................................................................................................................................................................................................TTT-CAAAAACATAG----CTGAAAACC.....23150.071010000
.......................................................................................................................................................TGAATAGGTTTGACTTCTTTTTTAGA.............................................................................................................................................................................................................................26150.071100000
.....................................................................................................................................................................................................TAACGAGCAC------------------------TCGGATTTAAACCAA........................................................................................................................................................25150.071100000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGAA.................................................................................................................................................................24150.071100000
.........................................................................................................................................................................................ATAATATCTTCATAACGAGCA................................................................................................................................................................................................21150.071000010
.......................................................................................................................................................................................................................................................................................................................................................................TT-TTTTTT-CAAAAACATAG----CTGAAAACC.....28150.071010000
...................................................................................................................................................................................................CATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................18150.071100000
..........................................................................................................................................................................................TAATATCTTCATAACGAGCAC------------------------T......................................................................................................................................................................22150.071010000
................................................................................................................................................GCTCAACTGAATAGGTTTGACTTCTTTT..................................................................................................................................................................................................................................28150.071100000
......................................................................................................................................................................................AACATAATATCTTCATAACGAGC.................................................................................................................................................................................................23150.071010000
......................................................................................................................................................................................AACATAATATCTTCATAACGAGCAC------------------------.......................................................................................................................................................................25150.071010000
.........................................................................................................................................................................................................................................................................AAACGATCA--------ATTCTTTATAAAATACA...................................................................................................26150.071010000
.......................................................................................................................................................TGAATAGGTTTGACTTCTTTTTTAGT.............................................................................................................................................................................................................................26150.071001000
..............................................................................................................................................................................................................................................................................................................................................................................TT-CAAAAACATAG----CTGAAAACCTACAT27150.071010000
...................................................................................................................................................................................TAGAACATAATATCTTCATAACGAGCAC------------------------T......................................................................................................................................................................29150.071010000
............................................................................................................................................TGCCGCTCAACTGAATAGGTTTGACT........................................................................................................................................................................................................................................26150.071100000
................................................................................................................................................................................................CTTCATAACGAGCAC------------------------TCGGATT................................................................................................................................................................22150.071100000
.................................................................................................................................................................TGACTTCTTTTTTAGACTTAGAACATA..................................................................................................................................................................................................................27150.071100000
...........................................................................................................................................................TAGGTTTGACTTCTTTTTTAGACT...........................................................................................................................................................................................................................24150.071010000
........................................................................................................................................................................................................................................................................................................................................................................T-TTTTTT-CAAAAACATAG----CTGAAAACC.....27150.071010000
...........................................................................................................................................................................................AATATCTTCATAACGAGCAC------------------------TCGGATT................................................................................................................................................................27150.071100000
........................................................................................................................................................................................CATAATATCTTCATAACGAGCAC------------------------T......................................................................................................................................................................24150.071010000
.............................................................................................................................................GCCGCTCAACTGAATAGGTTTGAC.........................................................................................................................................................................................................................................24150.071010000
..............................................................................................................................................................................................................................................................TTTTAAG--TAAAACGATCA--------ATTCTT..............................................................................................................24150.071010000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGT..................................................................................................................................................................23150.071010000
...........................................................................................................................................................................................................................................................TTTTTTTAAG--TAAAACGATCA--------ATTCTT..............................................................................................................27150.071010000
...................................................................................................................................................................................................CATAACGAGCAC------------------------TCGGATTTAAACCA.........................................................................................................................................................26150.071100000
..............................................................................................................................................................................................ATCTTCATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................23150.071100000
..............................................................................................................................................................................................................................................................................ATCA--------ATTCTTTATAAAATACAA-AAGTTT-..........................................................................................28150.071010000
.......................................................................................................................................................................................ACATAATATCTTCATAACGAGCAC------------------------TCG....................................................................................................................................................................27150.071010000
................................................................................................................................................................................................CTTCATAACGAGCAC------------------------TCGGATTTAAAC...........................................................................................................................................................27150.071100000
............................................................................................................................................................................................................................................................................................................................................................................TTTT-CAAAAACATAG----CTGAAAACCTACAT29150.071010000
.................................................................................................................................................................................................TTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................19150.071010000
..................................................................................................................................................................................................TCATAACGAGCAC------------------------TCGGATTTAAACC..........................................................................................................................................................26150.071010000
............................................................................................................................................................................................................CAC------------------------TCGGATTTAAACCAAATAATTT.................................................................................................................................................25150.071010000
...........................................................................................................................................................................................AATATCTTCATAACGAGCAC------------------------TCG....................................................................................................................................................................23150.071010000
...........................................................................................................................................................................................................GCAC------------------------TCGGATTTAAACCAAATAATT..................................................................................................................................................25150.071010000
......................................................................................................................................................CTGAATAGGTTTGACTTCTTTTTTAGACT...........................................................................................................................................................................................................................29150.071100000
.......................................................................................................................................TACAGTGCCGCTCAACTGAATAGG...............................................................................................................................................................................................................................................24150.071100000
......................................................................................................................................................................................AACATAATATCTTCATAACGAGCAC------------------------TC.....................................................................................................................................................................27150.071010000
......................................................................................................................................................................................................................................................................................................................................................................TTT-TTTTTT-CAAAAACATAG----CTGAAAACC.....29150.071010000
.............................................................................................................................................................................................................................................TTAAACCAAATAATTTTTTTTAAG--T......................................................................................................................................25150.071010000
.......................................................................................................................................................................................................................................................................TAAAACGATCA--------ATTCTTTATAAAATACA...................................................................................................28150.071010000
...............................................................................................................................................................................................................................................................TTTAAG--TAAAACGATCA--------ATTCTTTAT...........................................................................................................26150.071010000
...................................................................................................................................................................................................CATAACGAGCAC------------------------TCGGATTTAAACC..........................................................................................................................................................25150.071010000
.......................................................................................................................................................TGAATAGGTTTGACTTCTTTTTTAG..............................................................................................................................................................................................................................25150.071010000
.............................................................................................................................................................................................................................................................................................................................................................................TTT-CAAAAACATAG----CTGAAAACCTACA.27150.071100000
.....................................................................................................................................................................................................TAACGAGCAC------------------------TCGGATTTAAACCAAA.......................................................................................................................................................26150.071100000
.........................................................................................................................................................................................ATAATATCTTCATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................28150.071010000
..................................................................................................................................................................................TTAGAACATAATATCTTCATAACGAGC.................................................................................................................................................................................................27150.071010000
.....................................................................................................................................................................................GAACATAATATCTTCATAACGAGCAC------------------------TC.....................................................................................................................................................................28150.071100000
...................................................................................................................................................................................TAGAACATAATATCTTCATAACGAGCA................................................................................................................................................................................................27150.071010000
...............................................................................................................................................................................................................................................................................................................................................................................T-CAAAAACATAG----CTGAAAACCT....22150.071010000
...............................................................................................................................................................................................................................................................................................................................................................................T-CAAAAACATAG----CTGAAAACCTACAT26150.071100000
..............................................................................................................................................................................................ATCTTCATAACGAGCAC------------------------TCGG...................................................................................................................................................................21150.071100000
........................................................................................................................................................GAATAGGTTTGACTTCTTTTTTAGACC...........................................................................................................................................................................................................................27150.071010000
.............................................................................................................................................................................................................................................................................GATCA--------ATTCTTTATAAAATACAA-AAGT.............................................................................................27150.071010000
.................................................................................................................................................................................................................................................................................................................................................................................CAAAAACATAG----CTGAAAACCT....21150.071010000
..........................................................................................................................................AGTGCCGCTCAACTGAATAGG...............................................................................................................................................................................................................................................21160.061100000
..........................................................................................................................................AGTGCCGCTCAACTGAATAGGTTTG...........................................................................................................................................................................................................................................25160.061100000
..............................................................................................................................................CCGCTCAACTGAATAGGTT.............................................................................................................................................................................................................................................19200.051100000
...............................................................................................................................................CGCTCAACTGAATAGGTTTGA..........................................................................................................................................................................................................................................21200.051000001
droBip1
---------------------------------------------------------------------------------------------------------------------------------------TACAGTGCCGCTCAACTGAATAGGTTTGACATTTGGTTAAGGTTTGAATCGTTGTAACTCTGTAACAAGAGC------------------------TCCGATTTTCTCGAAATAAGTTTCGATGTA--TAAAGAAATCT--------GTGTTTTATAAAATAGCA--AGTTT-CTGTTCTGTT----------CGTTT---TGTTTTTA-TA-TTATTTTTA-TTAATTTTTT-CAAAAATATAA----CAAAAAATGCCAATSizeHit CountTotal NormTotal
No Reads
droKik1
TGA----------------------------------------------------------------------------------------------------------------------------------AATACAGTGCCGCTCAACTGAATAGGTTTGACTTTTCTTTTAAGTTTGAAACGGTGTATCTCTGCAACAAGCCC------------------------TCCGATTTGATCGAAATAAATTTTTTTGTA--TAAAGAAAACT--------GTCTTTTGTGAAATAATA-AAAATT-GTGTCTTGTC----------GGGTT---TGTTGTTA-TA-TTATTTTTA-TTA-TTTTTT-CAAAAACATAA----CAAAATGGCTGCATSizeHit CountTotal NormTotal
No Reads
droFic1
CCACTTGCG-----CAGCACAATCCAGCCCTTTCTCTTTTAAACTTTAACGTACT-----------------------------------------------------------GCAA-----------TATCGGTACACTGCCGCTCAACTGAATAGGTTCATGCTCTCAGAGGAAGTAATTTGTCTATAATTTCTAAACCAGTGT------------------------ACCGATTTCC--AAAATTTTTTTTCTTTAA--CTCTTGAATCA--------TTTTATAATAAAATGCTG-AAGAAG-GTTTTTCAAA----------AACAT---ATTATTTA-TT-CCTTATTTA-ATT-TTTCTT-CTGAAAGGTTA----ACAAAATTCATGGTSizeHit CountTotal NormTotal
No Reads
droEle1
GAT------TGAAG---CAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAGCACGA-ATAATT-ATTTTCTTTT----------AGTAT---ACTTTTTA-TG-CTTT----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACA------CCAT-----------------------------------------------------------------------------------------------------CCATATACATATACATATAGATACACTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCAC------------------------TCGGATTTAAACCAAATAAATTTTTTTAAG--TAAAACGATCA--------ATTCTTTATAAAATACTAAAAGTTT-TTTTTTTTTT----------GGTTT---GGTTTTTA-TA-TTTTTTTTA-TCT-TTTTTT-CAAAAACATAA----CTGAAAACCTACATSizeHit CountTotal NormTotal
No Reads
droBia1
TTA------AAACA---TCA-----------------------------------TTCTTAAAGAATGTCCGAATTAAAAAAAAATTGTAAAAGGGACAACTTTATCGTACACT---------------------------ACTGCTCTTGTG--------------------------------------------TTAGACGCAC------------------------TCAGTTTTCC--------------------------------------------------------------------------------------------------ACACA-AA-TTTGTTTTA-TTT-TTATTC-AAAAAAA-AAAAAATTCAAAAACCTTGGTSizeHit CountTotal NormTotal
No Reads
droTak1
TTT------AAAAT---CCT-----------------------------------TT---------------------------------------------------------------------------------------------TTAAAATGGTGTGAT----------------------AGTATCATAAAAATTAGATATCGTTTTGAGACCATGAAGAAAATCTCGAT---------------------ACG--TTTCACAAAGA--------ATCACTCATATGTGCATC-GAGTATTT-TGT---TTTGTTTTTTTTTAACTCCTGCATGTTA-CA-T-TTTTATA-TTA-TTTTTT-TATGTAGGTAG-------TAAATGTAC-ASizeHit CountTotal NormTotal
No Reads
droEug1
TAA------C----------------------------------------------------------------------------------------------------------------------------ATACACTTATGGACAAAATAATAGGTGTGTTTTATTTTTCATTTTTAACTTTTTATTTCTAAGTCATGCTTTC------------------------TCCAATCAGCTTAAAACAAAGTTTTTTTAA--AACGTATATTA--------ATTGTCTTTAAAAGAAAA-AAGAAA-CAATACTATA----------AACCT---TATCATTAACA-ACAGAAGTA-GAT-TTTT------------------------TCCTAAATSizeHit CountTotal NormTotal
No Reads
dm3
ACC------AAAGA---CAT--------------------------TAGAATAT----------------------------------------------------------------------------TCAAATACAGTGCCGTTCAACTGAATAGGTTTGACTATTTGTTTAGGTTTGAACCGTTGTAACTAGGTTATATGCAA------------------------TCCAATTTAAGCGAAATAAATTTTTATGTA--TGAATAGATCA--------GTCATTTGTTTAATAGCA-AAGTTT-CTGATCTCTT----------AAATT---TGTTTTTA-TA-TCATTTTTA-TTT-TTTTTT-CAAAAACATAA----CAAAAAATCGTCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................A--TGAATAGATCA--------GTCATTTGT...........................................................................................................2182.75220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000022000000000010000000000000100001003000000000000000110000000000110000000020010000100001000000100000000
............................................................................................................................................................................TTAGGTTTGAACCGTTGTAACT............................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGAATAGATCA--------GTCATTTGTT..........................................................................................................2181.88150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000110000000000000101000000000000000000000000000102210
.................................................................................................................................................................................TTTGAACCGTTGTAACTAGGT........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTTATGTA--TGAATAGATCA--------GT..................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AATAT----------------------------------------------------------------------------TCAAATACAGTGCCGT............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TACAGTGCCGTTCAACTGAATAGG...............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................T--------------------------TAGAATAT----------------------------------------------------------------------------TCAAATACAGTGCCGT............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TTAGGTTTGAACCGTTGTAAC.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TATGCAA------------------------TCCAATTTAAGCGA.........................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TT----------AAATT---TGTTTTTA-TA-TCATTTTTA-........................................2640.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTATGTA--TGAATAGATCA--------GTC.................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................GTTTGACTATTTGTTTAGGTT...........................................................................................................................................................................................................................2180.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATGTA--TGAATAGATCA--------GTCA................................................................................................................2180.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010
.................................................................................................................................................................................................................................................................TGTA--TGAATAGATCA--------GTCAT...............................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATGTA--TGAATAGATCA--------GTCA................................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TAGCA-AAGTTT-CTGATCTCTT----------AAATT---..............................................................2690.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTT-CTGATCTCTT----------AAATT---..............................................................18100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCTT----------AAATT---TGTTTTTA-TA-TCATT.............................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................ATAGGTTTGACTATTTGTTTAGGT............................................................................................................................................................................................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGTA--TGAATAGATCA--------GTCATT..............................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGAATAGATCA--------GTCATTTGT...........................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATGTA--TGAATAGATCA--------GTCAT...............................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTT-CTGATCTCTT----------AAATT---TGTTTTTA-.....................................................2680.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TA--TGAATAGATCA--------GTCATTTG............................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TA--TGAATAGATCA--------GTCATTTGT...........................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................TGAATAGATCA--------GTCATTTG............................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATGTA--TGAATAGATCA--------GTC.................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGATCTCTT----------AAATT---TGTTTTTA-TA-..................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTT-CTGATCTCTT----------AAATT---TGT...........................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CTGAATAGGTTTGACTATTTT...................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATGTA--TGAATAGATCA--------GT..................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AC------------------------------------------------------------------------------------------------------------------------------------ATACAGTGCCGATCAACTGAATAGGTTTGACTTATTTT--AATTT--------TATATATACATTAAA---------------------------------------------------------------------TAATTTTAAA-TATCCGTATAAAACAAAA-TAGATT-TTGATTTAT--------------AT---AGAAATCA-TA-C-ATTTTTA-CTA-TTTTTTTAAAAAAC--AA----CAAACATTTTCCGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................AA-TAGATT-TTGATTTAT--------------AT---..............................................................1913.00300003000000000000
...........................................................................................................................................................................................................................................................................................................A-TAGATT-TTGATTTAT--------------AT---..............................................................1813.00300003000000000000
..............................................................................................................................................................................................................................................................................................................AGATT-TTGATTTAT--------------AT---AG............................................................1812.00200001100000000000
...................................................................................................................................................................................................................................................................................TTTAAA-TATCCGTATAAAACAAAA-TAGA.............................................................................................2811.00100000010000000000
...........................................................................................................................................................TAGGTTTGACTTATTTT--AATTT--------TATA...............................................................................................................................................................................................................2611.00100000010000000000
.........................................................................................................................................................................................................................................................................................................AAA-TAGATT-TTGATTTAT--------------...................................................................1811.00100001000000000000
.............................................................................................................................................................................................................................................................................................................TAGATT-TTGATTTAT--------------AT---AG............................................................1911.00100000100000000000
.......................................................................................................................................TACAGTGCCGATCAACTGAATAGGT..............................................................................................................................................................................................................................................2511.00100000000100000000
.................................................................................................................................................................................................TACATTAAA---------------------------------------------------------------------TAATTTTAAA-TATCCGTA............................................................................................................2711.00100000000010000000
droSec2
TT--------------------------------------------------------------------------------------------------------------------------------------------------GACTGAATAGGTTTGACTTCATT--AATGTTCGAAACGTCGTATCTCCGCAAAGAAAAC------------------------ACATATTAT----------TTTTTGA------AAAAAAGAAAT--------GTCATTTATTTAATAGAA-TATATT-C-----TGTT----------ATTTG---TGTCCTTA-TG-TTATTATTA-TTA-TATTTC-CTACAAC--AG----CAAAGCATCTCCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AT------------------------------------------------------------------------------------------------------------------------------------GTACAGTGCCTCTCAACTAAATAGGTTTGACTTTTTTC--------AAATCATGATTTT--TTTCT------------------CCATAAAGGGAATTCCGATTTAA-----ATAAATATTGTTGTA--TAAAGAATACT--------GTTATTTTTGAAATAGCA-AAGTTT-TGGTTCTGTT----------AGTTT---TGTTTTTA-T-------------TA--TTATT-CAAAAACGTAA----AACAAAATGTCCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AC------------------------------------------------------------------------------------------------------------------------------------ATACAGTGCCGCTCAACTGAATAGGTTTGAGTTTTTTT-AATTTTCAAAAC-----------------------------------------------------------------------------------CTATCT------ATGTCATTTTTAAAATAGCA-AAGTTT-TGGTTCTGCT----------AGTTT---CTTTATTA-AA-GGAGTTTTG-ATA-TTTTTT-TAAAAAC--AA----CAAAAAATTGGCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
GCG------GACC-----AATGTAAGCTGA--------------CAGACCATATT-----------------------------------------------------------C---------------TGATATACAGTGCCGCTCAACTAAATAGGTTCAACAATTTTC-AAAAGTCAAACCGCTATATCTTTTTAACCAACTT------------------------ACCGATTTATTTGAAATAATTTTTTTTTGGCATAGATTGATTC--------ATTGTTAATATGGCAAGA-AAGTTT-GTGGTTTCCA----------GGACA---CGTTT-TA-AA-TGCTATTTA-TGAATTTTTT-CAAAAACATTA----CAAAAAATGCCTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................TCAACAATTTTC-AAAAGTCAAACCGC...................................................................................................................................................................................................................2690.2220000000020
............................................................................................................................................................................................ATATCTTTTTAACCAACTT------------------------AC.....................................................................................................................................................................21110.0910100000000
.............................................................................................................................................................................................TATCTTTTTAACCAACTT------------------------ACCGATT................................................................................................................................................................25110.0910100000000
.............................................................................................................................................................................AAAAGTCAAACCGCTATATC.............................................................................................................................................................................................................20130.0810100000000
droPer2
TCA------ATAAAAAGCACAATATT----------CCTTAAAGT---CCAGTTT-----------------------------------------------------------TGAA-----------AGATTATACAGCGCCGCTCAACTGAATAGGTTCAACAATTTTC-AAAAGTCAAACCGCTATATCTTTTTAACCAACTT------------------------GCCGATTTATATGAAATATTTTTTTTTTTGTATAGATTAATTC--------GTTGTTAATATAGCAAGA-AATTTA-GTTGTTTCCA----------GGACA---CGTTTTTA-AA-GACTGTTTA-TTAATTTTTT-CAAAACTATCA----CAAAATAGCCTATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................TTTAACCAACTT------------------------GCCGATTTATAT...........................................................................................................................................................2411.001010000
..................................................................................................................................................TCAACTGAATAGGTTCAAC.........................................................................................................................................................................................................................................19160.061010000
droWil2
CTA------TATTA---TCA----------------------------------T-----------------------------------------------------------CCATTTAT-------ATTATATAGAGTACCGCTCATCTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAAGGAGCAC------------------------TCGGATTTAAACCAAATAAATTTTGTTAAG--TAAATCGATCA--------ATTATTTATAAAATACAA-ACGTTT-TTTTCTTTTG----------GGTTT---GGTTTTAA-TA-TGTTTTTTA-TTA-TATTTT-CAAAAACATAG----CTGAAAATCTACCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................TG----------GGTTT---GGTTTTAA-TA-TGTTTTT...........................................2411.00101000
..............................................................................................................................................................................................................C------------------------TCGGATTTAAACCAAATAAATTTTGC.............................................................................................................................................2740.25110000
..................................................................................................................................................................................................................................................................................................................T-TTTTCTTTTG----------GGTTT---GGTT..........................................................2040.25101000
..............................................................................................................................................................................................................C------------------------TCGGATTTAAACCAAATAAATTT................................................................................................................................................2440.25101000
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------CAGTGCCGCTCAACTGAATAGGTTTGACTTCTTTTTTAGACTTAGAACATAATATCTTCATAACGAGCAC------------------------TCGGATTTAAACCAAATAAATTTTGTTAAG--TAAAACGATCA--------ATTATTTATAAAATACAA-AAGTTT-TTTGT---TT----------GGTTT---GGTTTTTA-TA-TTTTTTTTTATTA-TATTTT-CAAAAACATAA----CTGAAAATCTACATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................AAATACAA-AAGTTT-TTTGT---TT----------GGT...................................................................2450.201000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................ATAGGTTTGACTTCTTTTTTAGACTTA.........................................................................................................................................................................................................................2760.171000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................ATAGGTTTGACTTCTTTTTTAGAC............................................................................................................................................................................................................................2460.171000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................TTTAGACTTAGAACATAATATCTTCAT........................................................................................................................................................................................................2760.171000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................C------------------------TCGGATTTAAACCAAATAAATTTTT..............................................................................................................................................2670.141000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................TTCATAACGAGCAC------------------------TCGGATTTAAACC..........................................................................................................................................................2770.141000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................TTGTTAAG--TAAAACGATCA--------ATTATTCCC...........................................................................................................2880.131001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGG...................................................................................................................................................................2280.131000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGA..................................................................................................................................................................2380.131000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGAT.................................................................................................................................................................2480.131000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCGGATTT...............................................................................................................................................................2680.131000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................CGATCA--------ATTATTTATAAAATACAA-AAGT.............................................................................................2880.131000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................TATCTTCATAACGAGCAC------------------------TCG....................................................................................................................................................................2190.111000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AATATCTTCATAACGAGCAC------------------------TC.....................................................................................................................................................................2290.111000000000000010000000000000000000000000000000000000000000000000
droMoj3
A--------------------------------------------------------------------------------------------------------------------------------------TACAGTGCCACTCACTTGAATAGGTTTGATTTCTGG--AAAATTAAAAATATTATATCTCATTAACGAATGC------------------------TATAATTTA-------------TTGTTTTA--TTAAA----AA--------ATCATTTATGACGATCGA-TAGTTA-CAGGTCTGTA----------A-TTT---TGCATTAA-TTACATTTTTTA-TTGATTTTCT-CAA-AA--------------------TATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAA------TAATT---TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAA--TATACAAAAAA--------AAACTTTTAAAAATTCTT-AAGTTT-TTTTTTTTTC----------AAATT---AAATTATA-TG-AAT--------------------------------------------TTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:53 PM