ID:

dan_593

 Coordinate:

scaffold_12916:7570808-7570958 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.98 -29.89 -29.89

Flybase annnotation

CDS [Dana\GF14531-cds]; exon [dana_GLEANR_15293:2]; intron [Dana\GF14531-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
mature
  1. scaffold_12903:207475-207495 -
  2. scaffold_12903:716975-716995 -
  3. scaffold_12916:7131709-7131729 -
  4. dan_593  scaffold_12916:7570825-7570845 -
  5. scaffold_12916:13855844-13855864 -
  6. scaffold_12929:2588521-2588541 -
  7. scaffold_12929:3244150-3244170 -
  8. scaffold_13047:1674313-1674333 -
  9. dan_1561  scaffold_13248:2673273-2673293 -
  10. dan_1561  scaffold_13248:2673303-2673323 -
  11. scaffold_13248:4367838-4367858 -
  12. scaffold_13248:4367892-4367912 -
  13. scaffold_13266:4578111-4578131 -
  14. scaffold_13266:10813182-10813202 -
  15. scaffold_13337:4025549-4025569 -
  16. scaffold_13337:9610256-9610276 -
  17. scaffold_13337:15646871-15646891 -
  18. scaffold_13340:23406606-23406626 -
  19. scaffold_13417:531367-531387 -
  20. scaffold_13417:1669121-1669141 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATAGCAATGGCAATGTCAATGGCGGCGCAACTATGGACAGCGGAACCGTCTGTCGGATCTCCAGGCATTCTGTTGTTGTCGGCCAGCAGCAACAGGCGCGCAATCTGACCCATAATGTCTCCAATGCCTCCTTTTCCTCCCAGCATCAGCAGCAGCAACATCAACAACAACAACAACAGCAACACCATCATCAGCTGCAGCAGCAACAACATCGTCTACCACCTTCTGGGACGGCTGCTCTCCAGCGGCG
**************************************************(((..(((.....(((((((((((((((((......))))))))))...........(((.......)))...))))))).....)))...)))........(((((.....................................)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 M044
female body
 M058
embryo
 V039
embryo
 V055
head
......................................................................CTGTTATTGCCGGCCAGCAG................................................................................................................................................................. 20 2 1 1.00 1 0 0 0 1 0
...............GTCAACGGCGGAGTAACTATG....................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 0 0 1
.............................................................................................CTGGCGCGCGATTTGACCCA.......................................................................................................................................... 20 3 1 1.00 1 0 1 0 0 0
...............GTCAACGGCGGAGTAACTATGG...................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..............TGTCAATGGCGGCGCAACT.......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
.................CAACGGCGGAGTAACTATGG...................................................................................................................................................................................................................... 20 3 4 0.50 2 2 0 0 0 0
................TCAACGGCGGAGTAACTATG....................................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0
.................CAACGGCGGAGTAACTATG....................................................................................................................................................................................................................... 19 3 8 0.25 2 2 0 0 0 0
................TCAACGGCGGAGTAACTAT........................................................................................................................................................................................................................ 19 3 12 0.08 1 1 0 0 0 0
...............GTCAACGGCGGAGTAACTA......................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 1 0 0
...................................................................................................................................................................AACAACAACAACAACAGCAAC................................................................... 21 0 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................AATAGGAACACGATCATCAG........................................................ 20 3 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................ATCAGCTGCAGCAACAACA.......................................... 19 1 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

TTATCGTTACCGTTACAGTTACCGCCGCGTTGATACCTGTCGCCTTGGCAGACAGCCTAGAGGTCCGTAAGACAACAACAGCCGGTCGTCGTTGTCCGCGCGTTAGACTGGGTATTACAGAGGTTACGGAGGAAAAGGAGGGTCGTAGTCGTCGTCGTTGTAGTTGTTGTTGTTGTTGTCGTTGTGGTAGTAGTCGACGTCGTCGTTGTTGTAGCAGATGGTGGAAGACCCTGCCGACGAGAGGTCGCCGC
**************************************************(((..(((.....(((((((((((((((((......))))))))))...........(((.......)))...))))))).....)))...)))........(((((.....................................)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M044
female body
 V105
male body		 V106
head
 M058
embryo
............................................................................................TGTTCGCGCGTAAGACTGG............................................................................................................................................ 19 2 2 1.00 2 0 1 1 0 0
..............................................................................................................................CGTTGGAAAAGGAGGGTCGTAAT...................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
..............................................................................................................................CGGTGGAAAAGGAGTGTCATAGT...................................................................................................... 23 3 1 1.00 1 1 0 0 0 0
.................................................................................................................................AGGAAAAGGTGAGTCGTA........................................................................................................ 18 2 13 0.69 9 0 3 4 2 0
............................................................................................TGTCCGCGGGTAAGACTGG............................................................................................................................................ 19 2 3 0.33 1 0 0 1 0 0
............................................................................................TGGCCGCGCGTTGTACTGGG........................................................................................................................................... 20 3 3 0.33 1 1 0 0 0 0
................................................................................................................................GTGGAAAAGGACGGTCATAGT...................................................................................................... 21 3 3 0.33 1 1 0 0 0 0
...........................................................................................TTGTCCGCGCGTGAGACTGCT........................................................................................................................................... 21 3 4 0.25 1 0 1 0 0 0
................................................................................................................................GAGGAAAAGGAGGGTAGTAATA..................................................................................................... 22 3 5 0.20 1 0 1 0 0 0
.................................................................................................................................AGGAATAGGAGGGTCTTA........................................................................................................ 18 2 7 0.14 1 1 0 0 0 0
.......................................................................ACAACAGCAGTCGGTCGTGGT............................................................................................................................................................... 21 3 7 0.14 1 0 1 0 0 0
.............................................................................................................................................................................TTTTGTCGTTGTGGTATTAG.......................................................... 20 2 10 0.10 1 0 1 0 0 0
..............................................................................................................................CGGCGGAAAAGGTGGGTAGT......................................................................................................... 20 3 11 0.09 1 0 0 0 0 1
...................................................................................................................................GAAAAGGAAGGTCGTAAT...................................................................................................... 18 2 14 0.07 1 1 0 0 0 0
..............................................................................................................................CGGTGGAAACGGAGGGTC........................................................................................................... 18 2 16 0.06 1 1 0 0 0 0
..............................................................................................................................................................................GTTGTCGGTATGGAAGTAGT......................................................... 20 3 17 0.06 1 0 1 0 0 0
..................................................................................................................................................................GTTGTTGTTGTTGTTGTCGT..................................................................... 20 0 20 0.05 1 0 1 0 0 0
................................................................................................................................GGGGGAAAGGAGGGTCG.......................................................................................................... 17 2 20 0.05 1 1 0 0 0 0
...........................................................................................................................................GGGTCGTAGTCGACGTCGG............................................................................................. 19 2 20 0.05 1 0 1 0 0 0
.................................................................................................GCGCGTAAGACTGGTAATT....................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:7570758-7571008 - dan_593 AATA-----------------------------------GCAATGGCAAT----------------------------------------------------------------------------------------GTCAA---TGGCGGCG-CAACTATGGACAGC-----------GGAACCGTCTGTCGGATCTCCAGGCA-----------------TTCTGTTGTTGTCGGCCAGCAGCAACAGGCGCGCAATCTGAC-------------------------------CCATAATGTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ATGCC--------------------TCCTTTT--------CCTCC------------------------------CA----------------------------------------------------------------------------GCATCAGCAGCAGCAA------CATCAACAACAACAACA------ACAGC------AACACCA------------------------TCATCAGCTGC--------AGCAGCAAC------------------A------A--C-A------TCGTCTACCACC---------------------TTCTGGGACGGCTGCTCTCCAGCGGCG
droBip1 scf7180000396554:187083-187270 - CATG-----------------------------------GCAATGTTAAT----------------------------------------------------------------------------------------GGTGT---C------G-CAACTATGGATACC-----------GGAGCAGTCTGCCGGATCTCCAGG-----------------------------------------CAACAGGCCCGCAATGTGAG-------------------------------CCACAACGTGTCC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ACGCC--------------------TCCTTTG---------------------------------------------------------------------------------------------C---------------------------GTCCCAGCAGCAACAA------CACAATCTCCAGGTGCT------GCAGCAACAT------------------------------CGTC-------------------------------------------------------CG-------------CCACC---------------------TTCTGGGACGGCTAGTCTCCAGCGGCG
droKik1 scf7180000302610:158432-158666 + AACA-----------------------------------GCAGCAGCATC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAGCA-ACAG---CAGCAGCAGCAG-----CAAC-----------------------------------------------------------------------------ACTC-------------GC--------------------------------------CGCACTCCTTGGTGCGCGTGAAGAAGGAGCCCAATCAGGTGGG----------------------------------------------------------------------------------------------------------------------------------T---------CAGCGTCAC--CTGT--CGCC---------------------------------------------------------------GCATC---ACC-------------------------------------------------------AGC------------A---GCATCAGCAACAGCAGCAG---CAACATCTCCACCAGCA------GCAGCATAAT------CTTCACCAGCAGCAACACAATCTCCACCAAC--------------AG---------------------------------------CAGCAGCAGCAGCATCAA---------------------------------------CAGCAGCA
droFic1 scf7180000454050:777463-777694 + AACA-----------------------------------ACTACAGTAGC----------------------------------------------------------------------------------------AACAA---CCACTGCGGCA-ACAA---CTAC--------------------------------AGCG-GCATCTAC----------------------------------------------TGCA---------------------------------------------------------------------------------------------------------------------------------GCAACAA-------------------------------------------------------------------------------CTACAGCAGCAACTACTGTGGCAACAACTACTG--CGGCAA--CCACTA---------------------------------------------------------C---------AGCTGCA----------------------------------------------ACTACTGCTGCAGCAACTACAACAGCAGCAACAACAACTG------------------CAGCA------AC------AACCACTGCAGCAACT--------------------------------------ACAACAGCAGCTACAACAAC------A------GCAGCTACAACAACAGCAGCAACTA---------------------------------------CAACAGCG
droEle1 scf7180000491356:120765-121007 - AACA-----------------------------------GCAGCAACACC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAACA-TCAG---CAAC--------------------------------AGCA-GCAACATC----------------------------------------------TGCA---------------------------------------------------------------------------------------------------------------------------------GCAGCAG-------------------------------------------------------------------------------CAACATCAGCAACAGCAG---------CAACA-------------CCAT---------------------------------------------------------C---------AGCAGCA----------------------------------------------ACAACAGCAGCA------------ACACCATCAGCAGCAG------CAGCAACACCATCAGCA------GCAGCAACAC------CATCAGCAGCAGCAGCAGCAACACCACCAAC--------------AG---------------C---AACAGCAGCAGCAG--C----------------AACAAC------TCA----CCAGCAATATGAGCCTGCTGACCATCAAAGGCG
droRho1 scf7180000776849:215077-215306 - TCGCTA-------------------------------CATCAATGTCAAC-------------------------------------------------------------------------------------------------CGCAATG-TGTTCACCGGCAAC---GGCGG--------------------------CC-C--------T-----------GCAAAAATTGTTCAA-----------------TTGCAGCGTCGGCGTCGCCTG----------------CCAAAATGTCACCCA------------------------------------------------------------------------------------------------------------------------------------------------CGCC-----------------------------------------------------CACAGCAA-----------------------------------------------------------CCACAACAGCAGC-------------------------------------------------------------------------------AGCAGCAACACCAACAG------CAGCAACATCAACAGC---------------AGCAACATCAACGGCA--------------------------------------GCAGCAGCAGCAGCAATAAC------A------ATAGCAACCCGAACAATAGCCGC-------------------------------------CTGTCAGCGGCA
droBia1 scf7180000302428:281074-281339 + AGCA-----------------------------------GCAACAACAAT----------------------------------------------------------------------------------------GGCAG---CGGCAGCAGCA-ACAGTGGCAAC---GGCGG-----CAGC-----------------------------------------------------------------------------AACA-------------GCGGCGAAGCTGCAAC-------------ATCGCAGCTGCCG------------CAGGTCAAGATGGAGGCGATCGATGAGAG----------------------------------------------------------------------------------------------------------------------------------C---------CTGCT-----------------------CGAGACTTTCGCGACCCCATTGCTCAGTCCCCTGGAGATAAAGACCGA--------GAAGCAGCAGC----------------------------------------------------------------------AACAGCAGCGACAACAGCAG------CAGCAACATCAGCAGCA------GCAGCAACACCAGCAGCA--------------------------------------------------------------AC------A------TCAGCAGCAGCAG---CAATACCAG---------------------------------------CAGCAGCA
droTak1 scf7180000415401:394031-394273 + AGCA-----------------------------------GCAACATCACC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAGCA-TCTCGCCCAGC-----------AGAGCCATC------------AGCA-ACATCAGC----------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------GCAGCA-------------------------------------------------------------------------------GCAGCAGCAGCAACAACTGATGAC----------------------CCAT------------------------------------------------------------------CAGCAGCAT----------------------------------G---CTGTGGCACAACAGCAACA------------TCACCACTTGCAGCAG------CAGCAACTTCAGCAGCA------GCAACAGCAC------------------------------CACCACC--------------AT---------------C---ATCAC------------------------CACCACCACCACCAGCAGTTGTCGC-TGCACCAGAACCACCTGTACTTCAGCGGTG
droEug1 scf7180000409182:440969-441188 + AGCA-----------------------------------GCAACAGGGGCTACCAGGG-GCAC--------------CAA-TACTTCC--------------------------------------GGCAGCAACACGGTCAACAT---------------------------------------------ACAGA----------------------------------------------------------------------------------------------------------------------------------------------------CCCAGACCGAT--GATGAGTTACTGCCGCTGTTAGCCATGGCCCCACAAGCA---------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------CTCCCACAAC----------------------------------------------------------------------AA---CAGCAACAGCAACAG------CAACAGCGAC---------------------AACAACAGCAGCAGCA--------------------------------------TCATTATCATTAGCAGCCAC------A------TCATCATCATCATCATCATCATCAA---------------------------------------CAACAACG
dm3 chrX:20358098-20358329 - AATC-----------------------------------CCAATCCCAAT----------------------------------------------------------------------------------------CGCAC---TCGCACCC-CA-ACAC---CCAT--------------------------------CATG-CACCATCCCTGCACGGAGGCAGTCG--ATCGGGCAGCATCACCAGCACGGCCAG------------------------------------CGGAGGCATCACC-----------------------------------------------------------------------------------------------------------------------------------------GTCCTCA---------------------------------------------------------------G-------------------------------------------------------------------------------------------------------------------T----C---AGCCGTT------------------------CTACCCACAGCAGCAG------CAGCAACAGCAACAGCA------GCAGCAACAT------CG------------------------TCATCCAGCGCTGACTGGCGGCAGCAGCAGCATC---------------------GATTTCGGGGAC-ATGG----------------------------------------CACATGGACTGCG
droSim2 3r:19283305-19283553 - ATCA-----------------------------------TCAGCAGCAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGCAGCA-GCAT---CCAC--------------------------------AGAT-CAATATGTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGCAGCAGCA-------------------------------------------------------------AATGTTGCCTCTGCAGCAGCAACATCATCAGTTTTT----------------------CCAG------------------------------------------------------------------CAGCAACAGACGAAATTTGTATCGCGGGTCGTTACAAGT----G---CGGCGGT------------------------GCATCAGCAGCAGCAG------CAGCATCATCAGCAGCA------GCAGCAACAC------------------------------CACCAAC--------------AG---------------C---AGCAACAGCAACAG--ATA------------TTACCAGC------TGG----------------CTTGGT-------AAACGGCA
droSec2 scaffold_0:20087900-20088148 - ATCA-----------------------------------TCAGCAGCAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGCAGCA-GCAT---CAAC--------------------------------AGAT-CAATATGTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGCAGCAGCA-------------------------------------------------------------AATGTTGCCTCTGCAGCAGCAACATCATCAGTTTTT----------------------CCAG------------------------------------------------------------------CAGCAACAGACGAAATTTGTATCGCGGGTCGTTACAAGT----G---CAGCGGT------------------------GCATCAGCAGCAGCAG------CAGCATCATCAGCAGCA------GCAGCAACAC------------------------------CACCAAC--------------AG---------------C---AGCAACAGCAACAG--ATA------------TTACCAGC------TGG----------------CTTGGT-------AAACGGCA
droYak3 2L:2082092-2082365 - GAAACAAATTTGCAATATAAATTTATGCGGATTTTTG---C-------GT--------CGCAGCGGCGCCGACGACGTCGACGTCATCGAATCGCGTAGCCCAGGCCATGCTGCTGATGTCGACGTCGCAGCAGCAGCAGCAGCAGTGGCAGCAACA----T---CAGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC------------------------------------------------------------------------------------------------------------------AACAGCAA-----------------------------------------------------------CTGCAGCAGCAGC---AAC-------------------------------------------------------AGC------------A---GCAGCAACAACAGCAG------CAGCAACAGC---------------------AGCAACAGCAGCAACA--------------------------------------GCAGCAGCAGCAGCAGCAAC------A------GCAGCAGCAACAACAAGGGCAGCGG---------------------------------------CGACGACG
droEre2 scaffold_4770:7679141-7679387 - AACA-----------------------------------GCAGCAGCAACAACAAC---------------------------ACATGAGCTCCC----------------------------------------------------CCCAACATCA-ATAC---CAAC--------------------------------AACA-CCAAATATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAACAACAACAATTGCCAAATCACCACCATCATCATCATCACCATCACCACCAT-CACAGTCAGC-----------------------------------------------------TACAACAA--------------------------------------------------------------------CTCCAACAAC----------------------------------------------------------------------AACAGCAACAACAACAACAG------CAGCAACACCAACAACA------ACAGCAACAC--------------------------------------------------------CAACAACAGCCGCTAC------A------CCAACAACAGCAACTGCAACACCAG---------------------------------------CAGCAGCA
dp5 XR_group6:6860352-6860620 - AGTG-----------------------------------GCGGCGACAAT---GTT-----------------------G-CAACATTGGCAGGCAAAAGCAATGAACAGCTGCAGCATG------------------ATCTG---TTGCAGCAGCT-GCAG---C-------------------------------------------------------------------------------------------------AGCA-------------GTTTCAAA-TGGCCGC-------------CGTGCAC---------------------------------------------------------------------------CAGCACCAGCAGCG-------------------------------------------------------------ACAGTTGCTGCAACATCAGCACTCACATCCACCCTT----------------------------------------------------TCAAACCCCC------------------------------TTGC----------------------------------------------------------------------AACAGCTGCCGCAACAGCAT------TCGCATCACTTGCAGCA------GCAGCAACAG------------------------------CAGCA-----------------------GCAG------C---AGCAACAGCAACAG---CACTCCCATCCGCAGTCGCAT---------------------------------------CATCCGCC
droPer2 scaffold_14:240248-240483 + AACA-----------------------------------GCAATAACAAC----------------------------------------------------------------------------------------AACAA---CAGCAACAGCT-ACTATC--GCC--------AGCAG---------TTTTATGTCCC-------------GCCACCGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAGC----------------------------------------------------------------------------AG--------------------------------CAGCAA--CAACAA---------------------------------------------------------CAG------CAGCAGCAGACGACATTAA--------------ACAAAGCCACGTATCAGC---------------------------ATCACAGCAACAACAATAG-----CCATCATCAGCAGCA------GC------AGCAGCAGCAGCAGCA--------------------------------------GCAGCAGCAGCAGCAGCTAC------G------TCATCATCATCATCAGAGCCAGCAA---------------------------------------CAGCAGCA
droWil2 scf2_1100000004511:9943229-9943437 + GCCA---------------------------------CGGCAGTGACAAT---CGC-----------------------G-CAAAGCT--------------------------------------CACAGCAGCATCAGCAGCAG---------------------------------------------GCGAATCTACATCTAC---------------------------------AGCAGCAACGGGCG-GCAATTGCAG-------------------------------CGGCAGCAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ACGTCTCAA------------------------------------------------------------------CAG----------------------------------------------------------------------------CAGCAGCAGCAGCAG------CAACAGCAATTGCAACT------GCAACAACAT------------------------------CAGCA-----------------------ATTG------C---AGCAACAGCAACAACAGCAGCATCAG---CAAATGCAG---------------------------------------CAGCAACA
droVir3 scaffold_12970:6318974-6319228 + AGCA-----------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------AGCAG---CAGCGACG-CA-A-AG---CTAC--------------------------------AGCT-CAGCAGGAGC---------------------------------GGGCA-GC--TGGCAGCA-------------GGAGCAAAGCGGCAGC-------------CAGGCAAGCACCG------------CA---------------------------------------------------------------GCTGAG-------------------------------------------------------------CAAGAC-----------------------------------------------ACGAGCCAACAACATGACCATTGCTGTCGTGCCGCCGAGTCGCCAGG---------------------GCAGC-------------------------------------------------------------------------------AGCAGCAGCAACAACAA------CAACAACAGCAACAAC---------------AGCAACAACAA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------ATAACAGTAAATATAACGGCAG---------------------------------------CAGCGGCG
droMoj3 scaffold_6473:12090632-12090861 - AACA-----------------------------------GCAGCAGCAGT----------------------------------------------------------------------------------------AACAG---CAGCAGCGGCA-GCAG---CAGCGGAAAC-----------GTC-GTTGAATCATCATGCG-----------------GA-----------------------------------------------------------------------------------------------------------------------AC-----------------TTGTTTTTGTTGTAAGCTGTGGTC---------------------------------------------------------GTAG-CATAATCTGA-----------------------------------------------------AACAGCAA-----------------------------------------------------------CGATAACAACAAC---AAC----------------------------------------------------------------------------AACAGCAACGACAGCAGCAGTAGCAACAAC---------------------AACAACAACAACAACA--------------------------------------GCAGCAGCAGCAAAATCCAC------G------ACATCAGCATTGACGACGGCAGCGA---------------------------------------CATTGTCG
droGri2 scaffold_14906:8741339-8741576 - AACA-----------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAACA-ACAG---CAGCAGCAGCAG-----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCACAGTCATCACGCTCCTCATCCACATGCACACACGCAG-CACCATCATCAACCACATTCA----------------------------------------------------------------------------------------------------------------------CATC---CAC----------------------------------------------------------------------ATCAGCATCCACATCAACAT------CATCCACATCAACAACAACAACAACAAC------AACAGCA------------------------CCATCAGCAAC--------AGCAGCAAC------------------A------A---------CAGCACCATCAGCAA---------------------GATGCAGCCAGTGCTGCCCATCAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AATA-----------------------------------GCAATGGCAAT----------------------------------------------------------------------------------------GTCAA---TGGCGGCG-CAACTATGGACAGC-----------GGAACCGTCTGTCGGATCTCCAGGCA-----------------TTCTGTTGTTGTCGGCCAGCAGCAACAGGCGCGCAATCTGAC-------------------------------CCATAATGTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ATGCC--------------------TCCTTTT--------CCTCC------------------------------CA----------------------------------------------------------------------------GCATCAGCAGCAGCAA------CATCAACAACAACAACA------ACAGC------AACACCA------------------------TCATCAGCTGC--------AGCAGCAAC------------------A------A--C-A------TCGTCTACCACC---------------------TTCTGGGACGGCTGCTCTCCAGCGGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................T----------------------------------------------------------------------------------------GTCAA---TGGCGGCG-CAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACA------ACAGC------AAC.........................................................................................................................................................21200.051010000
droBip1
CATG-----------------------------------GCAATGTTAAT----------------------------------------------------------------------------------------GGTGT---C------G-CAACTATGGATACC-----------GGAGCAGTCTGCCGGATCTCCAGG-----------------------------------------CAACAGGCCCGCAATGTGAG-------------------------------CCACAACGTGTCC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ACGCC--------------------TCCTTTG---------------------------------------------------------------------------------------------C---------------------------GTCCCAGCAGCAACAA------CACAATCTCCAGGTGCT------GCAGCAACAT------------------------------CGTC-------------------------------------------------------CG-------------CCACC---------------------TTCTGGGACGGCTAGTCTCCAGCGGCGSizeHit CountTotal NormTotal
No Reads
droKik1
AACA-----------------------------------GCAGCAGCATC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAGCA-ACAG---CAGCAGCAGCAG-----CAAC-----------------------------------------------------------------------------ACTC-------------GC--------------------------------------CGCACTCCTTGGTGCGCGTGAAGAAGGAGCCCAATCAGGTGGG----------------------------------------------------------------------------------------------------------------------------------T---------CAGCGTCAC--CTGT--CGCC---------------------------------------------------------------GCATC---ACC-------------------------------------------------------AGC------------A---GCATCAGCAACAGCAGCAG---CAACATCTCCACCAGCA------GCAGCATAAT------CTTCACCAGCAGCAACACAATCTCCACCAAC--------------AG---------------------------------------CAGCAGCAGCAGCATCAA---------------------------------------CAGCAGCASizeHit CountTotal NormTotal
No Reads
droFic1
AACA-----------------------------------ACTACAGTAGC----------------------------------------------------------------------------------------AACAA---CCACTGCGGCA-ACAA---CTAC--------------------------------AGCG-GCATCTAC----------------------------------------------TGCA---------------------------------------------------------------------------------------------------------------------------------GCAACAA-------------------------------------------------------------------------------CTACAGCAGCAACTACTGTGGCAACAACTACTG--CGGCAA--CCACTA---------------------------------------------------------C---------AGCTGCA----------------------------------------------ACTACTGCTGCAGCAACTACAACAGCAGCAACAACAACTG------------------CAGCA------AC------AACCACTGCAGCAACT--------------------------------------ACAACAGCAGCTACAACAAC------A------GCAGCTACAACAACAGCAGCAACTA---------------------------------------CAACAGCGSizeHit CountTotal NormTotal
No Reads
droEle1
AACA-----------------------------------GCAGCAACACC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAACA-TCAG---CAAC--------------------------------AGCA-GCAACATC----------------------------------------------TGCA---------------------------------------------------------------------------------------------------------------------------------GCAGCAG-------------------------------------------------------------------------------CAACATCAGCAACAGCAG---------CAACA-------------CCAT---------------------------------------------------------C---------AGCAGCA----------------------------------------------ACAACAGCAGCA------------ACACCATCAGCAGCAG------CAGCAACACCATCAGCA------GCAGCAACAC------CATCAGCAGCAGCAGCAGCAACACCACCAAC--------------AG---------------C---AACAGCAGCAGCAG--C----------------AACAAC------TCA----CCAGCAATATGAGCCTGCTGACCATCAAAGGCGSizeHit CountTotal NormTotal
No Reads
droRho1
TCGCTA-------------------------------CATCAATGTCAAC-------------------------------------------------------------------------------------------------CGCAATG-TGTTCACCGGCAAC---GGCGG--------------------------CC-C--------T-----------GCAAAAATTGTTCAA-----------------TTGCAGCGTCGGCGTCGCCTG----------------CCAAAATGTCACCCA------------------------------------------------------------------------------------------------------------------------------------------------CGCC-----------------------------------------------------CACAGCAA-----------------------------------------------------------CCACAACAGCAGC-------------------------------------------------------------------------------AGCAGCAACACCAACAG------CAGCAACATCAACAGC---------------AGCAACATCAACGGCA--------------------------------------GCAGCAGCAGCAGCAATAAC------A------ATAGCAACCCGAACAATAGCCGC-------------------------------------CTGTCAGCGGCASizeHit CountTotal NormTotal
No Reads
droBia1
AGCA-----------------------------------GCAACAACAAT----------------------------------------------------------------------------------------GGCAG---CGGCAGCAGCA-ACAGTGGCAAC---GGCGG-----CAGC-----------------------------------------------------------------------------AACA-------------GCGGCGAAGCTGCAAC-------------ATCGCAGCTGCCG------------CAGGTCAAGATGGAGGCGATCGATGAGAG----------------------------------------------------------------------------------------------------------------------------------C---------CTGCT-----------------------CGAGACTTTCGCGACCCCATTGCTCAGTCCCCTGGAGATAAAGACCGA--------GAAGCAGCAGC----------------------------------------------------------------------AACAGCAGCGACAACAGCAG------CAGCAACATCAGCAGCA------GCAGCAACACCAGCAGCA--------------------------------------------------------------AC------A------TCAGCAGCAGCAG---CAATACCAG---------------------------------------CAGCAGCASizeHit CountTotal NormTotal
No Reads
droTak1
AGCA-----------------------------------GCAACATCACC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAGCA-TCTCGCCCAGC-----------AGAGCCATC------------AGCA-ACATCAGC----------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------GCAGCA-------------------------------------------------------------------------------GCAGCAGCAGCAACAACTGATGAC----------------------CCAT------------------------------------------------------------------CAGCAGCAT----------------------------------G---CTGTGGCACAACAGCAACA------------TCACCACTTGCAGCAG------CAGCAACTTCAGCAGCA------GCAACAGCAC------------------------------CACCACC--------------AT---------------C---ATCAC------------------------CACCACCACCACCAGCAGTTGTCGC-TGCACCAGAACCACCTGTACTTCAGCGGTGSizeHit CountTotal NormTotal
No Reads
droEug1
AGCA-----------------------------------GCAACAGGGGCTACCAGGG-GCAC--------------CAA-TACTTCC--------------------------------------GGCAGCAACACGGTCAACAT---------------------------------------------ACAGA----------------------------------------------------------------------------------------------------------------------------------------------------CCCAGACCGAT--GATGAGTTACTGCCGCTGTTAGCCATGGCCCCACAAGCA---------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------CTCCCACAAC----------------------------------------------------------------------AA---CAGCAACAGCAACAG------CAACAGCGAC---------------------AACAACAGCAGCAGCA--------------------------------------TCATTATCATTAGCAGCCAC------A------TCATCATCATCATCATCATCATCAA---------------------------------------CAACAACGSizeHit CountTotal NormTotal
No Reads
dm3
AATC-----------------------------------CCAATCCCAAT----------------------------------------------------------------------------------------CGCAC---TCGCACCC-CA-ACAC---CCAT--------------------------------CATG-CACCATCCCTGCACGGAGGCAGTCG--ATCGGGCAGCATCACCAGCACGGCCAG------------------------------------CGGAGGCATCACC-----------------------------------------------------------------------------------------------------------------------------------------GTCCTCA---------------------------------------------------------------G-------------------------------------------------------------------------------------------------------------------T----C---AGCCGTT------------------------CTACCCACAGCAGCAG------CAGCAACAGCAACAGCA------GCAGCAACAT------CG------------------------TCATCCAGCGCTGACTGGCGGCAGCAGCAGCATC---------------------GATTTCGGGGAC-ATGG----------------------------------------CACATGGACTGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
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Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCA------GCAGCAACA..............................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CAGCAACAGCAACAGCA------GCAGCAA................................................................................................................................................................26180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCAGCAG------CAGCAAA.......................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCA------GCAGCAACAT------.......................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG------CAGCAACAGCAA..................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG------CAGCAACAGCAACAGCA------T......................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCA------GCAGCAACA..............................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCAACAGCAACAGCA------.......................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG------CAGCAACAGCAAC.................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG------CAGCAACAGCAACA................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCA------GCAGCAAC...............................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG------CAGCAACAGCAAC.................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
droSim2
ATCA-----------------------------------TCAGCAGCAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGCAGCA-GCAT---CCAC--------------------------------AGAT-CAATATGTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGCAGCAGCA-------------------------------------------------------------AATGTTGCCTCTGCAGCAGCAACATCATCAGTTTTT----------------------CCAG------------------------------------------------------------------CAGCAACAGACGAAATTTGTATCGCGGGTCGTTACAAGT----G---CGGCGGT------------------------GCATCAGCAGCAGCAG------CAGCATCATCAGCAGCA------GCAGCAACAC------------------------------CACCAAC--------------AG---------------C---AGCAACAGCAACAG--ATA------------TTACCAGC------TGG----------------CTTGGT-------AAACGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG------CAGCATCATCAGCA................................................................................................................................................................................2270.71500005000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACATCATCAG...................................................................................................................................................................................................................................................................................................................................................................................................19110.09100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------CAGCATCATCAGCA................................................................................................................................................................................18140.07100000010000000000
.............................................GCAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
droSec2
ATCA-----------------------------------TCAGCAGCAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGCAGCA-GCAT---CAAC--------------------------------AGAT-CAATATGTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGCAGCAGCA-------------------------------------------------------------AATGTTGCCTCTGCAGCAGCAACATCATCAGTTTTT----------------------CCAG------------------------------------------------------------------CAGCAACAGACGAAATTTGTATCGCGGGTCGTTACAAGT----G---CAGCGGT------------------------GCATCAGCAGCAGCAG------CAGCATCATCAGCAGCA------GCAGCAACAC------------------------------CACCAAC--------------AG---------------C---AGCAACAGCAACAG--ATA------------TTACCAGC------TGG----------------CTTGGT-------AAACGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCATCATCAGCAGCA------GCAGCAACAC------------------------------C..............................................................................................................................2911.0011000
......................................................................................................................................................................................................................TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGCAGCAGCA-------------------------------------------------------------AAT...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGTATCGCGGGTCGTTA................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAAGT----G---CAGCGGT------------------------G...................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCAGCA------GCAGCAAC...............................................................................................................................................................2250.2010001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCATCATCAGCAGCA------G......................................................................................................................................................................1970.1410010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------CAGCATCATCAGCA................................................................................................................................................................................19100.1010010
..............................................CAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGCAGCA-GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.0611000
............................................AGCAAC----------------------------------------------------------------------------------------ATCAG---CAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCA------GCAGC..................................................................................................................................................................18200.0510010
droYak3
GAAACAAATTTGCAATATAAATTTATGCGGATTTTTG---C-------GT--------CGCAGCGGCGCCGACGACGTCGACGTCATCGAATCGCGTAGCCCAGGCCATGCTGCTGATGTCGACGTCGCAGCAGCAGCAGCAGCAGTGGCAGCAACA----T---CAGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC------------------------------------------------------------------------------------------------------------------AACAGCAA-----------------------------------------------------------CTGCAGCAGCAGC---AAC-------------------------------------------------------AGC------------A---GCAGCAACAACAGCAG------CAGCAACAGC---------------------AGCAACAGCAGCAACA--------------------------------------GCAGCAGCAGCAGCAGCAAC------A------GCAGCAGCAACAACAAGGGCAGCGG---------------------------------------CGACGACGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAAC------A------GCAGCAGC................................................................25200.30600000000006
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAG------CAGCAACAGC---------------------AGC............................................................................................................................................................29180.06100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAG------CAGC..........................................................................................................................................................................................20200.05100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------------------------------------AGC------------A---GCAGCAACAACAGCAG------CA............................................................................................................................................................................................25200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAG------CAGCAACAGC---------------------...............................................................................................................................................................24200.05100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAACAACAGCAG------CAGCAACAGC---------------------...............................................................................................................................................................27200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC------A------GCAGCAGCAACA............................................................19200.05101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------------------------------------AGC------------A---GCAGCAACAACAGCAG------C.............................................................................................................................................................................................24200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AAC-------------------------------------------------------AGC------------A---GCAGCAACA...........................................................................................................................................................................................................19200.05101000000000
droEre2
AACA-----------------------------------GCAGCAGCAACAACAAC---------------------------ACATGAGCTCCC----------------------------------------------------CCCAACATCA-ATAC---CAAC--------------------------------AACA-CCAAATATTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAACAACAACAATTGCCAAATCACCACCATCATCATCATCACCATCACCACCAT-CACAGTCAGC-----------------------------------------------------TACAACAA--------------------------------------------------------------------CTCCAACAAC----------------------------------------------------------------------AACAGCAACAACAACAACAG------CAGCAACACCAACAACA------ACAGCAACAC--------------------------------------------------------CAACAACAGCCGCTAC------A------CCAACAACAGCAACTGCAACACCAG---------------------------------------CAGCAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAG------CAGCAACACC....................................................................................................................................................................................2140.2510001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG------CAGCAACACC....................................................................................................................................................................................1950.2010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------------------------------------------------AACAGCAACAACAACAACA.....................................................................................................................................................................................................22170.1830201000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACAG------CAGC..........................................................................................................................................................................................21200.0510100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------------------------------------------------AACAGCAACAACAACAAC......................................................................................................................................................................................................21200.0510100000
dp5
AGTG-----------------------------------GCGGCGACAAT---GTT-----------------------G-CAACATTGGCAGGCAAAAGCAATGAACAGCTGCAGCATG------------------ATCTG---TTGCAGCAGCT-GCAG---C-------------------------------------------------------------------------------------------------AGCA-------------GTTTCAAA-TGGCCGC-------------CGTGCAC---------------------------------------------------------------------------CAGCACCAGCAGCG-------------------------------------------------------------ACAGTTGCTGCAACATCAGCACTCACATCCACCCTT----------------------------------------------------TCAAACCCCC------------------------------TTGC----------------------------------------------------------------------AACAGCTGCCGCAACAGCAT------TCGCATCACTTGCAGCA------GCAGCAACAG------------------------------CAGCA-----------------------GCAG------C---AGCAACAGCAACAG---CACTCCCATCCGCAGTCGCAT---------------------------------------CATCCGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------GCAGCAACAG------------------------------CAGCA-----------------------...................................................................................................21200.2040400000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-----------------------GCAG------C---AGCAACAGCAA..........................................................................21200.0510000100000
droPer2
AACA-----------------------------------GCAATAACAAC----------------------------------------------------------------------------------------AACAA---CAGCAACAGCT-ACTATC--GCC--------AGCAG---------TTTTATGTCCC-------------GCCACCGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAGC----------------------------------------------------------------------------AG--------------------------------CAGCAA--CAACAA---------------------------------------------------------CAG------CAGCAGCAGACGACATTAA--------------ACAAAGCCACGTATCAGC---------------------------ATCACAGCAACAACAATAG-----CCATCATCAGCAGCA------GC------AGCAGCAGCAGCAGCA--------------------------------------GCAGCAGCAGCAGCAGCTAC------G------TCATCATCATCATCAGAGCCAGCAA---------------------------------------CAGCAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCTAC------G------TCATCATCA...............................................................2011.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------G------TCATCATCATCATCAGA.......................................................2011.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----CCATCATCAGCAGCA------GC------...............................................................................................................................................................1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTAC------G------TCATCATCATC.............................................................2011.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC----------------------------------------------------------------------------AG--------------------------------CAGCAA--CAACA.....................................................................................................................................................................................................................................................................................................................................................................20200.051001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCA------GC------AGCAGC.........................................................................................................................................................21200.051010000
droWil2
GCCA---------------------------------CGGCAGTGACAAT---CGC-----------------------G-CAAAGCT--------------------------------------CACAGCAGCATCAGCAGCAG---------------------------------------------GCGAATCTACATCTAC---------------------------------AGCAGCAACGGGCG-GCAATTGCAG-------------------------------CGGCAGCAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ACGTCTCAA------------------------------------------------------------------CAG----------------------------------------------------------------------------CAGCAGCAGCAGCAG------CAACAGCAATTGCAACT------GCAACAACAT------------------------------CAGCA-----------------------ATTG------C---AGCAACAGCAACAACAGCAGCATCAG---CAAATGCAG---------------------------------------CAGCAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................CTAC---------------------------------AGCAGCAACGGGCG-GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000
..........................................GTGACAAT---CGC-----------------------G-CAAAGCT--------------------------------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
........................................................................................................................................................................................................................................................................G-------------------------------CGGCAGCAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ACGT.........................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.....................................................................................................................................GCATCAGCAGCAG---------------------------------------------GCGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...................................................................................AAGCT--------------------------------------CACAGCAGCATCAGCAGCAG---------------------------------------------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100001
.............................................................................................................................................................................................................................................................G-GCAATTGCAG-------------------------------CGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
...............................................................................................................................................................................................................................................................................................................AACAAC-----------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------ACGTCTCAA------------------------------------------------------------------CAG----------------------------------------------------------------------------CAGC...............................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................TACATCTAC---------------------------------AGCAGCAACGGGCG-GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAT------------------------------CAGCA-----------------------ATTG------C---AGCAACAG.............................................................................2711.00100001
..........................................................................................................................................................................................................TCTAC---------------------------------AGCAGCAACGGGCG-GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
................................................AT---CGC-----------------------G-CAAAGCT--------------------------------------CACAGCAGCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAGCATCAG---C.......................................................2430.33100001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAA------------------------------------------------------------------CAG----------------------------------------------------------------------------CAGCAGCAGCAG.......................................................................................................................................................................................................20180.06101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAGCAGC................................................................21200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAG------CAACAGC.......................................................................................................................................................................................20200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAGCAGCA...............................................................22200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAGCAGCA...............................................................18200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAGCA..................................................................19200.05100010
droVir3
AGCA-----------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------AGCAG---CAGCGACG-CA-A-AG---CTAC--------------------------------AGCT-CAGCAGGAGC---------------------------------GGGCA-GC--TGGCAGCA-------------GGAGCAAAGCGGCAGC-------------CAGGCAAGCACCG------------CA---------------------------------------------------------------GCTGAG-------------------------------------------------------------CAAGAC-----------------------------------------------ACGAGCCAACAACATGACCATTGCTGTCGTGCCGCCGAGTCGCCAGG---------------------GCAGC-------------------------------------------------------------------------------AGCAGCAGCAACAACAA------CAACAACAGCAACAAC---------------AGCAACAACAA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------ATAACAGTAAATATAACGGCAG---------------------------------------CAGCGGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................G------------CA---------------------------------------------------------------GCTGAG-------------------------------------------------------------CAAGAC-----------------------------------------------ACGAGCCAA....................................................................................................................................................................................................................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAC-----------------------------------------------ACGAGCCAACAACAT..............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------.....................................................................22200.204004000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------AT...................................................................2760.171000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAACAA------CAACAACAGC....................................................................................................................................................................................26200.153003000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---------------------CAACA-----------------ACAGCAGCAGC..............................................................................................25200.153000300000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----------------ACAGCAGCAGCAGC------------A---------ATA..................................................................2380.131000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------CAACA-----------------ACAGCAGCAGCAGC------------...............................................................................20200.102000000000000000000200000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-------------------------------------------------------------------------------AGCAGCAGCAACAACAA------CAACA.........................................................................................................................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-------------------------------------------------------------------------------AGCAGCAGCAACAAC......................................................................................................................................................................................................18200.102020000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAA------CAACAACAGCA...................................................................................................................................................................................22200.102002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------AGCAACAACAA---------------------CAACA-----------------AC.......................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------------------CAACA-----------------ACAGCAGC.................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-----------------ACAGCAGCAGCAGC------------A---------AT...................................................................21160.061000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC---------------AGCAACAACAA---------------------CAACA-----------------AC.......................................................................................................25200.051000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA---------------------CAACA-----------------ACAGCAGCAG...............................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------CAACAACAGCAAC.................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAA---------------------CAACA-----------------ACAGCAGCA................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
..CA-----------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------AGCAG---CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA------CAACAACAGCA...................................................................................................................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------GCAGC-------------------------------------------------------------------------------AGCAGCAGCAACA........................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------.....................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------.....................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAAC---------------AGCAACA........................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAACAACAGCAACAAC---------------A..............................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAA------CAAC..........................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAAC---------------AGCAACAACAA---------------------CAACA-----------------AC.......................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC-------------------------------------------------------------------------------AGCAGCAGCAACAACA.....................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAACAAC---------------AGCAACA........................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------AGCAACAACAA---------------------CAACA-----------------A........................................................................................................21200.051000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAA------CAACAACAG.....................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAACAACAGCAACAAC---------------AGCAAC.........................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAA------CAACAACAGCAAC.................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------CAACA-----------------ACAGCAGCAGCAGC------------A---------.....................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
AACA-----------------------------------GCAGCAGCAGT----------------------------------------------------------------------------------------AACAG---CAGCAGCGGCA-GCAG---CAGCGGAAAC-----------GTC-GTTGAATCATCATGCG-----------------GA-----------------------------------------------------------------------------------------------------------------------AC-----------------TTGTTTTTGTTGTAAGCTGTGGTC---------------------------------------------------------GTAG-CATAATCTGA-----------------------------------------------------AACAGCAA-----------------------------------------------------------CGATAACAACAAC---AAC----------------------------------------------------------------------------AACAGCAACGACAGCAGCAGTAGCAACAAC---------------------AACAACAACAACAACA--------------------------------------GCAGCAGCAGCAAAATCCAC------G------ACATCAGCATTGACGACGGCAGCGA---------------------------------------CATTGTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................GCAGCGGCA-GCAG---CAGCGGAAAC-----------GTC-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droGri2
AACA-----------------------------------GCAGCAGCAGC----------------------------------------------------------------------------------------AGCAA---CAGCAGCAACA-ACAG---CAGCAGCAGCAG-----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCACAGTCATCACGCTCCTCATCCACATGCACACACGCAG-CACCATCATCAACCACATTCA----------------------------------------------------------------------------------------------------------------------CATC---CAC----------------------------------------------------------------------ATCAGCATCCACATCAACAT------CATCCACATCAACAACAACAACAACAAC------AACAGCA------------------------CCATCAGCAAC--------AGCAGCAAC------------------A------A---------CAGCACCATCAGCAA---------------------GATGCAGCCAGTGCTGCCCATCAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAAC--------AGCAGCAAC------------------A------A---------CAGCA.........................................................2560.17110

Generated: 05/17/2015 at 10:47 PM