ID:

dan_576

 Coordinate:

scaffold_12916:6728913-6728971 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dana_GLEANR_15333:2]; exon [dana_GLEANR_15333:3]; CDS [Dana\GF14569-cds]; CDS [Dana\GF14569-cds]; intron [Dana\GF14569-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------##################################################
GTGCTCATCGAAGGACTCTCCGCCTTCCTGCACACTCTTCGCTTGCACTGGTAAAAACTTCAATTAAATATCATTTTTTTTGCAAATTATTAATAAATGTATTTTTTAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGC
**************************************************...............(((((.(((((..................)))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V106
head
 V039
embryo
 V055
head
...........................................................................................................................GCAAGTTCTATGAGGGCGCTG............... 21 0 1 8.00 8 0 1 4 2 1 0
.....CATCGAAGGACTCTCCGCCTTCCT.................................................................................................................................. 24 0 1 5.00 5 4 1 0 0 0 0
...................................................................................................................GTTCATGAGCAAGTTCTATGAGGGC................... 25 0 1 3.00 3 0 1 2 0 0 0
...........................................................................................................................GCAAGTTCTATGAGGGCGCT................ 20 0 1 3.00 3 1 0 2 0 0 0
......ATCGAAGGACTCTCCGCCTTCCT.................................................................................................................................. 23 0 1 2.00 2 1 1 0 0 0 0
....................................................................................................................................ATGAGGGCGCTGGTTACGC........ 19 0 1 2.00 2 0 0 1 1 0 0
..........................................................................................................................AGCAAGTTCTATGAGGGCGCT................ 21 0 1 2.00 2 0 1 1 0 0 0
...................................................................................................................GTTCATGAGCAAGTTCTATGA....................... 21 0 1 2.00 2 0 0 2 0 0 0
.....CATCGAAGGACTCTCCGCCTTCCTGCACA............................................................................................................................. 29 0 1 2.00 2 0 2 0 0 0 0
................................CACTCTTCGCTTGCACTGG............................................................................................................ 19 0 1 2.00 2 0 0 0 2 0 0
...........AGGACTCTCCGCCTTCCTGCACA............................................................................................................................. 23 0 1 2.00 2 1 1 0 0 0 0
.................................................................................................................GAGTTCATGAGCAAGTTCTATGAGGGC................... 27 0 1 2.00 2 1 0 1 0 0 0
GTGCTCATCGAAGGACTCTCCGC........................................................................................................................................ 23 0 1 2.00 2 1 0 0 1 0 0
.....CATCGAAGGACTCTCCGCCTTCCC.................................................................................................................................. 24 1 1 2.00 2 2 0 0 0 0 0
..GCTCATCGAAGGACTCTCGGCC....................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...............................ACACTCTTCGCTTGCACTGGGTG......................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
.....CATCGAAGGACTCTCCGCCTTCCTGCAC.............................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
.......................CGTCCTGCACACTCTTCGCTTG.................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.....CATCGAAGGACTCTCCGCC....................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................ATGAGCAAGTTCTATGAGG..................... 19 0 1 1.00 1 0 0 1 0 0 0
............GGACTCTCCGCCTTCCTGC................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
..........AAGGACTCTCCGCCTTCCTGCACA............................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................CAAGTTCTATGAGGGCGCTG............... 20 0 1 1.00 1 0 1 0 0 0 0
.............................GCACACTCTTCGCTTGCACTGGGT.......................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
GTGCTCATCGAAGGACTCTCCGCCTTCC................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.....CATCGAAGGACTCTCCGCCTTCCTGCA............................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
..GCTCATCGAAGGACTCTCCGC........................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0
..GCTCATCGAAGGACTCTC........................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................TCATGAGCAAGTTCTATGAGGGCGCT................ 26 0 1 1.00 1 0 1 0 0 0 0
.............................GCACACTCTTCGCTTGCACTG............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................GAGCAAGTTCTATGAGGGCGCTG............... 23 0 1 1.00 1 0 0 0 0 1 0
............GGACTCTCCGCCTTCCTGCA............................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.........GAAGGACTCTCCGCCTTCCTGCACA............................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
...............................ACACTCTTCGCTTGCACTGG............................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
...CTCATCGAAGGACTCTCC.......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.TGCTCATCGAAGGACTCTC........................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1
...................................................................................................................GTTCATGAACTAGTTCTATGAGGGCG.................. 26 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................GGTCTATGAGGGCGCTGGTTACGC........ 24 1 1 1.00 1 1 0 0 0 0 0
.............GACTCTCCGCCTTCCTGCAC.............................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
...........AGGACTCTCCGCCTTCCTGCACACTCTT........................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
...............CTCTCCGCCTTCCTGCAC.............................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................ATCAGGGCGCTGGTTACGCCTT..... 22 1 1 1.00 1 1 0 0 0 0 0
..............ACTCTCCGCCTTCCTGCACACTCTT........................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
...............................ACACTCTTCGCTTGCACTGGGT.......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................................GTTCATGAGCAAGTTCTATGAGGTC................... 25 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................GAGCAAGTTCTATGAGGGCGCT................ 22 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................GTTCATGAGCAAGTTCTATGAGGG.................... 24 0 1 1.00 1 0 0 1 0 0 0
..............................CACACTCTGCGCTTGCACTG............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................GTTCTATGAGGGCGCTGGTTACGCCTT..... 27 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................GCAAGTTCTATGAGGGCGC................. 19 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................CGATGAGGGCGCTGGTTACGCCTT..... 24 1 1 1.00 1 1 0 0 0 0 0
...CTCTTCGAAGGACTCTCCGCCT...................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.......TCGAAGGACTCTCCGCCTTCCTGCACA............................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
.............GACTCTCCGCCTTCCTGCACA............................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
...........AGGACTCTCCGCCTTCCTGCACACTCTTC....................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
.......................CTTCCTGCACACTCTTCGCTTGCAC............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..........AAGGACTCTCCGCCTTCCTGC................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
......ATCGAAGGACTCTCGGCCTTCCTGCAC.............................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0
..............................CACACTCTTCGCTTGCACTGGGTG......................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..GCTCATCGAAGGACTCTCCGCC....................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........................TTCCTGCACACTCTTCGCTTGCACTG............................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................GCAAGTTCTATGAGGGCGCTGG.............. 22 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................GTTGGAGTTCATGAGCAAGTTC............................ 22 1 3 0.33 1 1 0 0 0 0 0
............................................................................................................GGGTGGAGTTCATGAGCAAGT.............................. 21 0 3 0.33 1 0 1 0 0 0 0
.............................................................................................................GGTGGAGTTCATGAGCAA................................ 18 0 3 0.33 1 0 0 1 0 0 0
.............................................................................................................GGTGGAGTTCATGAGCAAGTTCT........................... 23 0 3 0.33 1 0 0 0 1 0 0
...........................................................................................................................GCAAGTTCGATGACGCCGCT................ 20 3 4 0.25 1 0 1 0 0 0 0
.....................................................................................................GTTTTTAGGGTGGAGTTGGT...................................... 20 3 15 0.07 1 0 0 0 0 1 0

Anti-sense strand reads

CACGAGTAGCTTCCTGAGAGGCGGAAGGACGTGTGAGAAGCGAACGTGACCATTTTTGAAGTTAATTTATAGTAAAAAAAACGTTTAATAATTATTTACATAAAAAATCCCACCTCAAGTACTCGTTCAAGATACTCCCGCGACCAATGCGGAAGCTCG
**************************************************...............(((((.(((((..................)))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 V105
male body		 M058
embryo
 M044
female body
 V055
head
.....................................................................................................AAAAAAGCCCACCTCAAGTA...................................... 20 1 1 1.00 1 1 0 0 0 0
.ACGAGTAGCTTGCTGATAG........................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0
...........................................................................AAAAAACGTTTAATAATTA................................................................. 19 0 1 1.00 1 0 0 1 0 0
.ATGAGTAGCTTGCTGATAG........................................................................................................................................... 19 3 9 0.22 2 0 1 0 0 1
.................................................................TTTATAGTAAAACAAAGGTT.......................................................................... 20 2 9 0.11 1 0 0 0 1 0
..................................................CATTTTGGAAGTTGATTTA.......................................................................................... 19 2 10 0.10 1 1 0 0 0 0
................................................ACCATTTTTGGGGTTATTTTAT......................................................................................... 22 3 12 0.08 1 1 0 0 0 0
CACGAGTAACTTGCTGATA............................................................................................................................................ 19 3 12 0.08 1 0 0 0 1 0
...............................................................................................................ACCACAAGTACTCGTTAAT............................. 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:6728863-6729021 - dan_576 GTGCTCATCGAAGGACTCTCCGCCTTCCTGCACACTCTTCGCTTGCACTGGTAAAAAC------------------TTCAATTAAA-----------TATCATTTTTT-TTGC---------AAATTATTAA----TAAAT---GTATTTTTTAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGC
droBip1 scf7180000396568:85926-86083 + GTGCTCATCGAAGGACTCTCCGCCTTCCTACATACACTCCGCTTGCATTGGTAAGGTTATAG------------------------CTT---AA-AT--ATTCTTTTT-CAGT-AAATT--ACAAATTAA----------T---GTTCGTTTTAGGGTGGAGTTTATGAGCAAATTTTATGAGGGCGCTGGTTACGCCTTCGAGC
droKik1 scf7180000302677:1002639-1002802 + GTGCTCATCGAAGGACTCTCGGCCTTCCTTCACACACTGCGCTTGCACTGGTAAGCT--TGG------------------------GTTAACTTTAT--CCACTTTTT-TAAATGGACT--ATAACCCCGAA-------TC---TCTTCTCGCAGGGTGGAATTCATGAGCAAATTCTATGAGGGCGCTGGTTACGCCTTTGAGC
droFic1 scf7180000451938:242-406 - GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGCTTGCATTGGTGAGAT--TGA------------------------CTTAATGA-AA--CCACTTTTT-CAGTAGAAGG--ATAACCATCCAA---C--TC---TTTTTTTTCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
droEle1 scf7180000491028:3461430-3461596 - GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACATTGCGTTTGCATTGGTGAGAT--TGG------------------------ATTAATCA-CATAACGTTTTTT-CAGACACAGT--CTAACCTACCAA---C--CT---TTTTTTGTCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGC
droRho1 scf7180000779410:201657-201819 + GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACGTTGCGCTTGCATTGGTGAGAT--TGG------------------------ATTAATTA-CA--GCAGTTTGT-GAGGCAGAGT--CTAACCCGGCCA------C----TCTCTTTTCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
droBia1 scf7180000302422:1292118-1292275 - GTCCTCATCGAGGGGCTCTCAGCCTTCCTGCACACACTGCGCTTGCATTGGTGAGAC--TGG------------------------ATTAATGA--A--CCACTTTTT-CGGATCCGGC--CTAACCTGCGT--------------TTTTTCTAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
droTak1 scf7180000415863:562327-562490 - GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACCCTGCGTTTGCATTGGTGAGAT--TGG------------------------AGTAATGA-AA--GCATTTTTT-CAGACACAGT--CTAATCTGCCT----C--TT---TTGTTTTTCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGC
droEug1 scf7180000409122:140636-140798 + GTACTCATCGAAGGACTTTCGGCCTTCCTGCACACACTGCGTTTGCATTGGTGAGTTTTTGG------------------------CTTAATGA-GA--GCATTTTTT-CAGAGTAAGC--CTAACTTTT-T-------C----TGTTTTTCCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGC
dm3 chr2L:11743956-11744117 + GTGCTCATCGAAGGACTCTCGGCCTTCTTGCACACACTGCGTTTGCACTGGTGAGTT--GCG------------------------AATAATGA-GG--ACACAA-TT-CAGATGCATT--TTAACCTGCGA-------TT---TGCTCTTTCAGGGTTGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
droSim2 2l:11419754-11419916 + GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGTTTGCACTGGTGAGAT--TCG------------------------TATAATGA-GG--ACACATTTT-GAGATGCATT--TTAACCTGCTA-------TT---TGTTTTTGCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
droSec2 scaffold_3:7133749-7133911 + GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACGCTGCGTTTGCACTGGTGAGAT--TCG------------------------TATAATGA-GG--ACACATTTT-GAGATGCATT--TTAACCTGCCA-------TT---TGTTTTTGCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
droYak3 2L:8163241-8163401 + GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGTTTGCACTGGTGAGCA--TCG------------------------AATAATGA-GT--ACGCAT-TT-CGGATGCATT--TTAACCTCATT-------T----TGTACCTTCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGC
droEre2 scaffold_4929:13672672-13672832 - GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGTTTGCACTGGTGAGAG--GCG------------------------AATAATGA-AC--ACGCAT-TT-CAGATGCATT--CTAACGTCATT-------T----TGTTCTTCCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGC
dp5 4_group3:2613511-2613673 + GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACCCTCCGCCTGCACTGGTAGGACC------------------TCAGACGGTG-----------TTT-CCTTGCCTTGTGCCTTTG--CTAACCTTCTA-------TT---TTCCTTTCAAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGC
droPer2 scaffold_1:4087957-4088119 + GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACCCTCCGCCTGCACTGGTAGGACC------------------TTAGACGGTG-----------TTT-CCTTGCCTTGTACCTTTG--CTAACCTTCTA-------TT---TTCCTTTCAAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGC
droWil2 scf2_1100000004585:3689935-3690101 - GTCCTTATTGAAGGTCTTTCGGCCTTCTTGCATACCTTGCGTTTGCATTGGTGAGTCGATGG-----CAAAAAAACTTCT----------------A--T--CTTTCT-GTGAGTCTTA--TTTACCTTTTT-------TT---GTCGCTTTCAGGGTGGAATTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGC
droVir3 scaffold_12963:6334004-6334170 + dvi_10629 GTGCTCATTGAGGGTCTCTCGGCCTTTTTGCACACATTGCGCTTGCACTGGTAAGTT--ACT-----CT----------C---G-----AATTC-CA--GAGATTTTT-AAGTTAATTAATTAAATATTT-T-------TTAATT-TACAAACAGGGTCGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGCGC
droMoj3 scaffold_6500:25471762-25471929 + GTGCTCATCGAGGGTCTGTCGGCTTTCTTGCACACACTGCGCTTGCATTGGTGAGTT--TGG-----CG----------A---G-----AATTC-CA--TTCCGTTTT-CAGTCTA------TAACTATTTGATCTA-TTTGATG-TACTTTTAGGGTCGAGTTCATGAGCAAGTTCTATGAGGGCGCCGGCTATGCCTTTGCGC
droGri2 scaffold_15252:9566913-9567083 + GTGCTCATTGAGGGTCTCTCGGCCTTTTTGCATACATTGCGGTTGCACTGGTATATT--ATATATATTT----------A---A-----AGTTC-CT--CAAATTATT-CAGTTAACTG--ACATGTTTTTAA---A--TT---ATTTTCAACAGGGTCGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GTGCTCATCGAAGGACTCTCCGCCTTCCTGCACACTCTTCGCTTGCACTGGTAAAAAC------------------TTCAATTAAA-----------TATCATTTTTT-TTGC---------AAATTATTAA----TAAAT---GTATTTTTTAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTG...............2118.008101042
.....CATCGAAGGACTCTCCGCCTTCCT................................................................................................................................................................................2415.005140000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGC...................2513.003100020
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCT................2013.003010020
......ATCGAAGGACTCTCCGCCTTCCT................................................................................................................................................................................2312.002110000
..................................................................................................................................................................................ATGAGGGCGCTGGTTACGC........1912.002000011
........................................................................................................................................................................AGCAAGTTCTATGAGGGCGCT................2112.002100010
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGA.......................2112.002000020
.....CATCGAAGGACTCTCCGCCTTCCTGCACA...........................................................................................................................................................................2912.002200000
................................CACTCTTCGCTTGCACTGG..........................................................................................................................................................1912.002000002
...........AGGACTCTCCGCCTTCCTGCACA...........................................................................................................................................................................2312.002110000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTATGAGGGC...................2712.002010010
GTGCTCATCGAAGGACTCTCCGC......................................................................................................................................................................................2312.002010001
.....CATCGAAGGACTCTCCGCCTTCCC................................................................................................................................................................................2412.002020000
...............................ACACTCTTCGCTTGCACTGGGTG.......................................................................................................................................................2311.001100000
.....CATCGAAGGACTCTCCGCCTTCCTGCAC............................................................................................................................................................................2811.001100000
.....CATCGAAGGACTCTCCGCC.....................................................................................................................................................................................1911.001010000
.....................................................................................................................................................................ATGAGCAAGTTCTATGAGG.....................1911.001000010
............GGACTCTCCGCCTTCCTGC..............................................................................................................................................................................1911.001100000
..........AAGGACTCTCCGCCTTCCTGCACA...........................................................................................................................................................................2411.001100000
..........................................................................................................................................................................CAAGTTCTATGAGGGCGCTG...............2011.001100000
.............................GCACACTCTTCGCTTGCACTGGGT........................................................................................................................................................2411.001010000
GTGCTCATCGAAGGACTCTCCGCCTTCC.................................................................................................................................................................................2811.001010000
.....CATCGAAGGACTCTCCGCCTTCCTGCA.............................................................................................................................................................................2711.001100000
..GCTCATCGAAGGACTCTCCGC......................................................................................................................................................................................2111.001001000
..GCTCATCGAAGGACTCTC.........................................................................................................................................................................................1811.001010000
...................................................................................................................................................................TCATGAGCAAGTTCTATGAGGGCGCT................2611.001100000
.............................GCACACTCTTCGCTTGCACTG...........................................................................................................................................................2111.001010000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGCGCTG...............2311.001001000
............GGACTCTCCGCCTTCCTGCA.............................................................................................................................................................................2011.001100000
.........GAAGGACTCTCCGCCTTCCTGCACA...........................................................................................................................................................................2511.001010000
...............................ACACTCTTCGCTTGCACTGG..........................................................................................................................................................2011.001100000
...CTCATCGAAGGACTCTCC........................................................................................................................................................................................1811.001010000
.TGCTCATCGAAGGACTCTC.........................................................................................................................................................................................1911.001000100
.............GACTCTCCGCCTTCCTGCAC............................................................................................................................................................................2011.001010000
...........AGGACTCTCCGCCTTCCTGCACACTCTT......................................................................................................................................................................2811.001100000
...............CTCTCCGCCTTCCTGCAC............................................................................................................................................................................1811.001010000
..............ACTCTCCGCCTTCCTGCACACTCTT......................................................................................................................................................................2511.001010000
...............................ACACTCTTCGCTTGCACTGGGT........................................................................................................................................................2211.001010000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGCGCT................2211.001000010
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGG....................2411.001000010
.............................................................................................................................................................................GTTCTATGAGGGCGCTGGTTACGCCTT.....2711.001100000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGC.................1911.001000001
.......TCGAAGGACTCTCCGCCTTCCTGCACA...........................................................................................................................................................................2711.001100000
.............GACTCTCCGCCTTCCTGCACA...........................................................................................................................................................................2111.001100000
...........AGGACTCTCCGCCTTCCTGCACACTCTTC.....................................................................................................................................................................2911.001100000
.......................CTTCCTGCACACTCTTCGCTTGCAC.............................................................................................................................................................2511.001010000
..........AAGGACTCTCCGCCTTCCTGC..............................................................................................................................................................................2111.001100000
..............................CACACTCTTCGCTTGCACTGGGTG.......................................................................................................................................................2411.001100000
..GCTCATCGAAGGACTCTCCGCC.....................................................................................................................................................................................2211.001010000
........................TTCCTGCACACTCTTCGCTTGCACTG...........................................................................................................................................................2611.001100000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTGG..............2211.001000010
..........................................................................................................................................................GGGTGGAGTTCATGAGCAAGT..............................2130.331100000
...........................................................................................................................................................GGTGGAGTTCATGAGCAA................................1830.331000010
...........................................................................................................................................................GGTGGAGTTCATGAGCAAGTTCT...........................2330.331000001
droBip1
GTGCTCATCGAAGGACTCTCCGCCTTCCTACATACACTCCGCTTGCATTGGTAAGGTTATAG------------------------CTT---AA-AT--ATTCTTTTT-CAGT-AAATT--ACAAATTAA----------T---GTTCGTTTTAGGGTGGAGTTTATGAGCAAATTTTATGAGGGCGCTGGTTACGCCTTCGAGCSizeHit CountTotal NormTotal
No Reads
droKik1
GTGCTCATCGAAGGACTCTCGGCCTTCCTTCACACACTGCGCTTGCACTGGTAAGCT--TGG------------------------GTTAACTTTAT--CCACTTTTT-TAAATGGACT--ATAACCCCGAA-------TC---TCTTCTCGCAGGGTGGAATTCATGAGCAAATTCTATGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
droFic1
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGCTTGCATTGGTGAGAT--TGA------------------------CTTAATGA-AA--CCACTTTTT-CAGTAGAAGG--ATAACCATCCAA---C--TC---TTTTTTTTCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACATTGCGTTTGCATTGGTGAGAT--TGG------------------------ATTAATCA-CATAACGTTTTTT-CAGACACAGT--CTAACCTACCAA---C--CT---TTTTTTGTCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACGTTGCGCTTGCATTGGTGAGAT--TGG------------------------ATTAATTA-CA--GCAGTTTGT-GAGGCAGAGT--CTAACCCGGCCA------C----TCTCTTTTCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
droBia1
GTCCTCATCGAGGGGCTCTCAGCCTTCCTGCACACACTGCGCTTGCATTGGTGAGAC--TGG------------------------ATTAATGA--A--CCACTTTTT-CGGATCCGGC--CTAACCTGCGT--------------TTTTTCTAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACCCTGCGTTTGCATTGGTGAGAT--TGG------------------------AGTAATGA-AA--GCATTTTTT-CAGACACAGT--CTAATCTGCCT----C--TT---TTGTTTTTCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
droEug1
GTACTCATCGAAGGACTTTCGGCCTTCCTGCACACACTGCGTTTGCATTGGTGAGTTTTTGG------------------------CTTAATGA-GA--GCATTTTTT-CAGAGTAAGC--CTAACTTTT-T-------C----TGTTTTTCCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotal
No Reads
dm3
GTGCTCATCGAAGGACTCTCGGCCTTCTTGCACACACTGCGTTTGCACTGGTGAGTT--GCG------------------------AATAATGA-GG--ACACAA-TT-CAGATGCATT--TTAACCTGCGA-------TT---TGCTCTTTCAGGGTTGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGGC...................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000560000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGC...................25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000003000140000000
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGC...................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000003000130000000
.................................ACACTGCGTTTGCACTGG..........................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....CATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000311000000
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGGGC...................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312000000
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGAGGGC...................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002020100000000
......................................................................................................................................................................TGAGCAAGTTCTACGAGGGC...................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000010000001100000000000000000000000000000
.....CATCGAAGGACTCTCGGCC.....................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
...............................................................................................................................................................................TCTACGAGGGCGCTGGTT............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CATCGAAGGACTCTCGGC......................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000
...........................................................................................................................................................................AAGTTCTACGAGGGCGCT................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGCAAGTTCTACGAGGGCGCT................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAG......................2222.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGGGCGCT................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
..........................CTTGCACACACTGCGTTTGCA..............................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................CGAGGGCGCTGGTTACGC........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
............GGACTCTCGGCCTTCTTGCAC............................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GCGCTGGTTACGCCTTTGA..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGC...................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGG....................2022.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000200000000000100000000000000000000000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGG.....................2321.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000
.............GACTCTCGGCCTTCTTGCT.............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCTTCTTGCACACACTGCGTTTGC...............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGCTGGTTACGCCTTTGAGC2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGCAAGTTCTACGAGGGCGC.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.................................ACACTGCGTTTGCACTGT..........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GCGCTGGTTACGCCTTTGAGC2111.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGCGC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.TGCTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................CTCGGCCTTCTTGCACACACTGCGT...................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..GCTCATCGAAGGACTCTCG........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGCGCTGGTT............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCAAGTTCTACGAGGGCGC.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............GGACTCTCGGCCTTCTTGCACACA.........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CATCGAAGGACTCTCGGCCTTCTTGC..............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAGGACTCTCGGCCTTCTTGCACA...........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................GCATT--TTAACCTGCGA-------TT---TGCT.........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................ACGAGGGCGCTGGTTACGCCTT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGCAAGTTCTACGAGGGC...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................GCTGGTTACGCCTTTGAG.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TACGAGGGCGCTGGTTACGC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCAAGTTCTACGAGGGCGCTG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCAAGTTCTACGAGGGCGCTGG..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
GTGCTCATCGAAGGACTCTCGGCC.....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................GTTGAGTTCATGAGCAAGTTCTACGA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CACACTGCGTTTGCACTGG..........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCGAAGGACTCTCGGCCT....................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CAAGTTCTACGAGGGCGCTG...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGCGCTG...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..GCTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................TCATGAGCAAGTTCTACGA.......................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................GTTGAGTTCATGAGCAAGTTCTACGAG......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................CTTGCACACACTGCGTTTGC...............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................................CGAGGGCGCTGGTTACGCCTTTGAGC2611.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGAGGGC...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............GACTCTCGGCCTTCTTGC..............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTCTCGGCCTTCTTGCACA...........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......ATCGAAGGACTCTCGGCCT....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGCGCT................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGG....................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGGCGCT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................GCTGGTTACGCCTTTGAGC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GACTCTCGGCCTTCTTGCACA...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCATCGAAGGACTCTCGGC......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................TCATGAGCAAGTTCTACGAG......................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGG.....................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACG........................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................CACTGCGTTTGCACTGGGT........................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droSim2
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGTTTGCACTGGTGAGAT--TCG------------------------TATAATGA-GG--ACACATTTT-GAGATGCATT--TTAACCTGCTA-------TT---TGTTTTTGCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGC...................22112.001218210000000000000
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGAGGGC...................26111.001107220000000000000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGC...................1918.00805300000000000000
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGGC...................2115.00504000000000100000
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGGGC...................2313.00302100000000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGC...................2513.00302000000000100000
...CTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2212.00201100000000000000
........CGAAGGACTCTCGGCCTT...................................................................................................................................................................................1812.00201100000000000000
................................CACACTGCGTTTGCACTG...........................................................................................................................................................1812.00201100000000000000
.......TCGAAGGACTCTCGGCCT....................................................................................................................................................................................1812.00200200000000000000
...............CTCTCGGCCTTCCTGCACACACT.......................................................................................................................................................................2312.00200200000000000000
..................................................................................................................................................................TTCATGAGCAAGTTCTACGAGGGC...................2411.00100010000000000000
.............GACTCTCGGCCTTCCTGCACACACTG......................................................................................................................................................................2611.00100010000000000000
.....CATCGAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2411.00100100000000000000
.....CATCGAAGGACTCTCGGCCTTCCTGC..............................................................................................................................................................................2611.00100100000000000000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGAGGGC...................2711.00101000000000000000
...............................ACACACTGCGTTTGCACTG...........................................................................................................................................................1911.00101000000000000000
...........................................................................................................................................................GGTGGAGTTCATGAGCAAGT..............................2031.00300003000000000000
........................................................................................................................................................................AGCAAGTTCTACGAGGGC...................1811.00101000000000000000
...CTCATCGAAGGACTCTCGGCC.....................................................................................................................................................................................2111.00101000000000000000
GTGCTCATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2611.00101000000000000000
GTGCTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2511.00101000000000000000
...........AGGACTCTCGGCCTTCCT................................................................................................................................................................................1811.00100100000000000000
....TCATCGAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2511.00100010000000000000
.....CATCGAAGGACTCTCGGCCTTCCTG...............................................................................................................................................................................2511.00100010000000000000
.............GACTCTCGGCCTTCCTGC..............................................................................................................................................................................1811.00101000000000000000
......ATCGAAGGACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2711.00100100000000000000
........CGAAGGACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2511.00101000000000000000
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGG....................2120.50100100000000000000
..............................................................................................................................................................GGAGTTCATGAGCAAGTTCTACGA.......................2420.50100010000000000000
.............................................................................................................................................................TGGAGTTCATGAGCAAGTTCTACGAGG.....................2720.50100000000001000000
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGG....................2020.50100100000000000000
.................................ACACTGCGTTTGCACTGGGT........................................................................................................................................................2020.50100010000000000000
...................................................................................................................................................................TCATGAGCAAGTTCTACGA.......................1920.50101000000000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGG...................2520.50101000000000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACG........................2020.50100010000000000000
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGG.....................1920.50100000000000100000
droSec2
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACGCTGCGTTTGCACTGGTGAGAT--TCG------------------------TATAATGA-GG--ACACATTTT-GAGATGCATT--TTAACCTGCCA-------TT---TGTTTTTGCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGAGGGC...................26126.002645161
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGC...................25110.00102161
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGC...................1916.0060060
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGC...................2215.0050230
..GCTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2114.0040040
..GCTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2313.0030120
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGGGC...................2313.0030210
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGGC...................2113.0030120
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGAGGGC...................2713.0030111
........................................................................................................................................................................AGCAAGTTCTACGAGGGC...................1813.0030021
..........................................................................................................................................................................................GCTGGTTACGCCTTTGAGC1912.0020020
................................................................................................................................................................................CTACGAGGGCGCTGGTTACGCCT......2312.0020020
.....CATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2012.0022000
..GCTCATCGAAGGACTCTCGGCC.....................................................................................................................................................................................2212.0020020
.................................ACGCTGCGTTTGCACTGG..........................................................................................................................................................1812.0020020
..................................CGCTGCGTTTGCACTGGGT........................................................................................................................................................1931.6750050
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGG....................2421.5030030
.................................ACGCTGCGTTTGCACTGGGT........................................................................................................................................................2021.5030030
..................................................................................................................................................................TTCATGAGCAAGTTCTACGAGGGC...................2411.0010010
.............................................................................................................................................................................GTTCTACGAGGGCGCTGGT.............1911.0010010
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGCGCTGGTT............2611.0010100
...............................ACACGCTGCGTTTGCACTGGGT........................................................................................................................................................2221.0020020
...............CTCTCGGCCTTCCTGCACAC..........................................................................................................................................................................2011.0010010
.......................CTTCCTGCACACGCTGCGTTTGC...............................................................................................................................................................2311.0010100
.....CATCGAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2411.0011000
.....CATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2111.0010010
...CTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2011.0010010
.........................TCCTGCACACGCTGCGTTT.................................................................................................................................................................1911.0011000
.................................ACGCTGCGTTTGCACTGGG.........................................................................................................................................................1911.0010010
................................CACGCTGCGTTTGCACTGGG.........................................................................................................................................................2011.0010100
......ATCGAAGGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2811.0011000
...................CGGCCTTCCTGCACACGCTGCGTTTG................................................................................................................................................................2611.0010010
...CTCATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2311.0010010
.............................................................................................................................................................................GTTCTACGAGGGCGCTGGTTACGC........2411.0010010
...CTCATCGAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2611.0011000
...........................CTGCACACGCTGCGTTTGC...............................................................................................................................................................1911.0010010
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGCGCTGG..............2711.0011000
GTGCTCATCGAAGGACTCTCGGCC.....................................................................................................................................................................................2411.0010010
.......................CTTCCTGCACACGCTGCGTTT.................................................................................................................................................................2111.0010010
.........................TCCTGCACACGCTGCGTTTGC...............................................................................................................................................................2111.0010010
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGGCGCT................2411.0010010
...............................ACACGCTGCGTTTGCACTGGG.........................................................................................................................................................2111.0010010
.....CATCGAAGGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2911.0011000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGCGCTG...............2311.0011000
.......TCGAAGGACTCTCGGCCT....................................................................................................................................................................................1811.0010010
.....CATCGAAGGACTCTCGGC......................................................................................................................................................................................1811.0010010
...CTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2211.0010010
.....CATCGAAGGACTCTCGGCC.....................................................................................................................................................................................1911.0010010
.................CTCGGCCTTCCTGCACACGCTGCGTT..................................................................................................................................................................2611.0010010
.TGCTCATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2511.0010010
............GGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2211.0011000
...........................................................................................................................................................GGTGGAGTTCATGAGCAAGTT.............................2140.7530030
............................................................................................................................................................GTGGAGTTCATGAGCAAGTTCTACGA.......................2620.5010010
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGAGG.....................2420.5010010
.................................................................................................................................................................GTTCATGAGCAAGTTCTAC.........................1920.5010010
............................TGCACACGCTGCGTTTGCACTGGGT........................................................................................................................................................2520.5010010
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGG....................2120.5010010
......................................................................................................................................................................TGAGCAAGTTCTACGAGGG....................1920.5011000
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGG.....................2120.5010010
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGG....................2020.5010010
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGAGG.....................2520.5010010
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGG.....................1920.5010100
..........................................................................................................................................................GGGTGGAGTTCATGAGCAAGT..............................2140.2510100
............................................................................................................................................................GTGGAGTTCATGAGCAAGTT.............................2040.2510100
..........................................................................................................................................................GGGTGGAGTTCATGAGCAAG...............................2040.2510100
droYak3
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGTTTGCACTGGTGAGCA--TCG------------------------AATAATGA-GT--ACGCAT-TT-CGGATGCATT--TTAACCTCATT-------T----TGTACCTTCAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGC...................25113.0013030000100000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGCGCTG...............2917.00730000040000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGA.......................2117.00702000050000
................................................................................................................................................................AGTTCATGAGCAAGTTCTATGAGGGC...................2617.00702000050000
...............CTCTCGGCCTTCCTGCACACACTGCGTTTGCA..............................................................................................................................................................3216.00600000000006
.....CATCGAAGGACTCTCGGCCTTCCTGC..............................................................................................................................................................................2616.00606000000000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTG...............2115.00501100030000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGC...................1915.00513000010000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGG....................2413.00300010020000
.....................................................................................................................................................................ATGAGCAAGTTCTATGAGGGC...................2113.00310000020000
...................................................................................................................................................................TCATGAGCAAGTTCTATGAGGGC...................2313.00301000020000
............GGACTCTCGGCCTTCCTGC..............................................................................................................................................................................1913.00302100000000
.....CATCGAAGGACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2813.00303000000000
....................................................................................................................................................................CATGAGCAAGTTCTATGAGGGC...................2213.00300000030000
............................................................................................................................................................................AGTTCTATGAGGGCGCTG...............1813.00302010000000
........CGAAGGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2613.00302100000000
GTGCTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2312.00210000010000
..................................................................................................................................................................TTCATGAGCAAGTTCTATGAGGGC...................2412.00201100000000
..................................................................................................................................................................................ATGAGGGCGCTGGTTACGC........1912.00200100010000
...............CTCTCGGCCTTCCTGCACA...........................................................................................................................................................................1912.00202000000000
..GCTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2112.00200000020000
.......................CTTCCTGCACACACTGCGTTTGC...............................................................................................................................................................2312.00201000010000
......ATCGAAGGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2812.00202000000000
.....CATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2112.00220000000000
...........AGGACTCTCGGCCTTCCTGC..............................................................................................................................................................................2012.00201100000000
...............CTCTCGGCCTTCCTGCACACACTG......................................................................................................................................................................2412.00201100000000
...........AGGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2312.00202000000000
.....CATCGAAGGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2912.00202000000000
..GCTCATCGAAGGACTCTCGGCC.....................................................................................................................................................................................2212.00201100000000
.............GACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2012.00202000000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGCGCT................2812.00201000010000
.................................ACACTGCGTTTGCACTGGGT........................................................................................................................................................2021.50302100000000
..........................CCTGCACACACTGCGTTTGC...............................................................................................................................................................2011.00100100000000
.........................................................................................................................................................................................CGCTGGTTACGCCTTTGAGC2011.00101000000000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTATGAG......................2411.00100000010000
.............GACTCTCGGCCTTCCTGC..............................................................................................................................................................................1811.00101000000000
.........GAAGGACTCTCGGCCTTCCTGCACACAC........................................................................................................................................................................2811.00100100000000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTGGTT............2411.00100000010000
..GCTCATCGAAGGACTCTCGGCCTTCC.................................................................................................................................................................................2611.00101000000000
..........................................................................................................................................................................CAAGTTCTATGAGGGCGCTGGT.............2211.00100000010000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGG.....................2311.00100000010000
................TCTCGGCCTTCCTGCACACACTG......................................................................................................................................................................2311.00110000000000
GTGCTCATCGAAGGACTCTCGGCC.....................................................................................................................................................................................2411.00100000010000
.....CATCGAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2411.00100100000000
...........AGGACTCTCGGCCTTCCT................................................................................................................................................................................1811.00110000000000
......................................................................................................................................................................TGAGCAAGTTCTATGAGGG....................1911.00100000010000
........................................................................................................................................................................AGCAAGTTCTATGAGGGCGCTG...............2211.00100000010000
.................................ACACTGCGTTTGCACTGGTGGA......................................................................................................................................................2211.00101000000000
...CTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2011.00100000010000
....................................................................................................................................................................CATGAGCAAGTTCTATGAGGGCGCTG...............2611.00100000010000
................................................................................................................................................................AGTTCATGAGCAAGTTCTATGA.......................2211.00101000000000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGG....................1811.00101000000000
.....CATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................................GCTGGTTACGCCTTTGAGC1911.00101000000000
......ATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2011.00100010000000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGCGCTG...............2311.00100000010000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTGGT.............2311.00100000010000
..............................................................................................................................................................GGAGTTCATGAGCAAGTTCTATGAGGGC...................2811.00100100000000
..............ACTCTCGGCCTTCCTGCAC............................................................................................................................................................................1911.00101000000000
......ATCGAAGGACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2711.00100100000000
.................CTCGGCCTTCCTGCACACACTG......................................................................................................................................................................2211.00101000000000
...............................ACACACTGCGTTTGCACTGGGT........................................................................................................................................................2221.00201000010000
................................................................................................................................................................AGTTCATGAGCAAGTTCTATGAGGG....................2511.00100000010000
..................................................................................................................................................................TTCATGAGCAAGTTCTATGAGGGCGC.................2611.00100000010000
...................................................................................................................................................................TCATGAGCAAGTTCTATGAGGG....................2211.00100000010000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAG......................2211.00100000100000
...................................................................................................................................................................TCATGAGCAAGTTCTATGAGGGCGCT................2611.00100000010000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGCGC.................2711.00100100000000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTATGAGGGC...................2711.00100000010000
..GCTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2311.00100000010000
.............GACTCTCGGCCTTCCTGCACACACT.......................................................................................................................................................................2511.00110000000000
..................................................................................................................................................................TTCATGAGCAAGTTCTATGAGGGCGCT................2711.00100000010000
...............CTCTCGGCCTTCCTGCACACAC........................................................................................................................................................................2211.00101000000000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGC.................1911.00100000010000
.....................................................................................................................................................CTTCAGGGTGGAGTTCATGAGC..................................2211.00100000010000
.....................................................................................................................................................................ATGAGCAAGTTCTATGAGGGCGCTGG..............2611.00100000010000
................................CACACTGCGTTTGCACTGGGT........................................................................................................................................................2120.50101000000000
..............................................................................................................................................................GGAGTTCATGAGCAAGTTC............................1920.50101000000000
............................................................................................................................................................GTGGAGTTCATGAGCAAGTT.............................2020.50100000010000
..................................CACTGCGTTTGCACTGGGT........................................................................................................................................................1950.20100010000000
droEre2
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACACTGCGTTTGCACTGGTGAGAG--GCG------------------------AATAATGA-AC--ACGCAT-TT-CAGATGCATT--CTAACGTCATT-------T----TGTTCTTCCAGGGTGGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGAGGGC...................26113.00132011720
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGC...................2516.0060100410
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGGGC...................2314.0040002200
...........................................................................................................................................................GGTGGAGTTCATGAGCAAGTT.............................2113.0032000010
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGA.......................2113.0031000110
.....................................................................................................................................................................ATGAGCAAGTTCTACGAGGGC...................2113.0031000110
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGC...................1913.0030000120
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGC...................2213.0030001110
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGAGGGC...................2713.0030000300
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGG....................2413.0030000300
............................................................................................................................................................GTGGAGTTCATGAGCAAGTTCTA..........................2312.0020000200
.............GACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2012.0020101000
...CTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2012.0021000100
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAG......................2212.0021000010
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGA...................1912.0020000020
..GCTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2112.0020100010
.................................ACACTGCGTTTGCACTGGGT........................................................................................................................................................2012.0020000020
........................................................................................................................................................................AGCAAGTTCTACGAGGGC...................1811.0010100000
.............................................................................................................................................................TGGAGTTCATGAGCAAGTTCTACGAGG.....................2711.0011000000
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGAG......................2311.0010001000
..........................................................................................................................................................GGGTGGAGTTCATGAGCAAG...............................2011.0010000100
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGAGGG....................2611.0010001000
..........................................................................................................................................................GGGTGGAGTTCATGAGCA.................................1811.0010000100
.............GACTCTCGGCCTTCCTGCACACACTG......................................................................................................................................................................2611.0011000000
....................................................................................................................................................................CATGAGCAAGTTCTACGAGG.....................2011.0010000100
................................................................................................................................................................AGTTCATGAGCAAGTTCTACGA.......................2211.0011000000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTACGA.......................2311.0010001000
...............................................................................................................................................................GAGTTCATGAGCAAGTTC............................1811.0010000100
..........................................................................................................................................................GGGTGGAGTTCATGAGCAAGTT.............................2211.0010000100
...................................................................................................................................................................TCATGAGCAAGTTCTACGAGGGAA..................2411.0011000000
............GGACTCTCGGCCTTCCTGCACA...........................................................................................................................................................................2211.0011000000
.......................................................................................................................................................................GAGCAAGTTCTACGAGGGCGCT................2211.0010000100
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGCGCTGGC.............2811.0010100000
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGGCGCT................2511.0010000100
............................................................................................................................................................................AGTTCTACGAGGGCGCTGGTTACGC........2511.0010000010
.....CATCGAAGGACTCTCGGCCTTCCTGC..............................................................................................................................................................................2611.0010000010
.......................CTTCCTGCACACACTGCGTTTGC...............................................................................................................................................................2311.0010100000
....................................................................................................................................................................CATGAGCAAGTTCTACGAGGG....................2111.0010000100
..............................................................................................................................................................GGAGTTCATGAGCAAGTTCTACGAGG.....................2611.0011000000
........................................................................................................................................................................AGCAAGTTCTACGAGGGA...................1811.0010000010
..................................................................................................................................................................TTCATGAGCAAGTTCTACGAGGGA...................2411.0011000000
...CTCATCGAAGGACTCTCGGCCTTCCTGC..............................................................................................................................................................................2811.0010001000
.....CATCGAAGGACTCTCGGCC.....................................................................................................................................................................................1911.0010001000
.......................CTTCCTGCACACACTGCGTTTG................................................................................................................................................................2211.0010001000
..................................................................................................................................................................TTCATGAGCAAGTTCTACGAGGGC...................2411.0010100000
.................................................................................................................................................................GTTCATGAGCAAGTTCTACGAGGGA...................2511.0010000100
..................................................................................................................................................................................ACGAGGGCGCTGGTTACGCCTTTGAGC2711.0011000000
..............................CACACACTGCGTTTGCACTGGGTG.......................................................................................................................................................2420.5011000000
..................................CACTGCGTTTGCACTGGGT........................................................................................................................................................1940.2511000000
dp5
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACCCTCCGCCTGCACTGGTAGGACC------------------TCAGACGGTG-----------TTT-CCTTGCCTTGTGCCTTTG--CTAACCTTCTA-------TT---TTCCTTTCAAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............GGACTCTCGGCCTTCCTGCAC............................................................................................................................................................................2112.0020110000000
.................................................................................................................................................................................TATGAGGGCGCTGGTTACGC........2012.0020200000000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGC...................2512.0020010001000
..........................CCTGCACACCCTCCGCCTGCA..............................................................................................................................................................2111.0010100000000
...............CTCTCGGCCTTCCTGCACACCCTCCGC...................................................................................................................................................................2711.0010010000000
.................................................................................................................................................................................TATGAGGGCGCTGGTTACGCCTT.....2311.0010000100000
..................TCGGCCTTCCTGCACACCCTC......................................................................................................................................................................2111.0010100000000
.....CATCGAAGGACTCTCGGCCTT...................................................................................................................................................................................2111.0010100000000
......ATCGAAGGACTCTCGGCCTTCCTG...............................................................................................................................................................................2411.0010100000000
..................................................................................................................................................................................ATGAGGGCGCTGGTTACGCCTT.....2211.0010100000000
.............GACTCTCGGCCTTCCTGC..............................................................................................................................................................................1811.0010100000000
......................................................................................................................................................................TGAGCAAGTTCTATGAGGGCG..................2111.0010100000000
......ATCGAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2311.0010100000000
..............ACTCTCGGCCTTCCTGCACACC.........................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................AGCAAGTTCTATGAGGGCGC.................2011.0010100000000
...........AGGACTCTCGGCCTTCCTGCACACCCT.......................................................................................................................................................................2711.0010100000000
.................CTCGGCCTTCCTGCACACCCTCCGC...................................................................................................................................................................2511.0010100000000
.........GAAGGACTCTCGGCCTTCCTGC..............................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................GGAGTTCATGAGCAAGTTCT...........................2021.0020200000000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGG....................1811.0010100000000
...CTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTG...............2111.0010100000000
...............................................................................................................................................................GAGTTCATGAGCAAGTTCT...........................1920.5010100000000
droPer2
GTGCTCATCGAAGGACTCTCGGCCTTCCTGCACACCCTCCGCCTGCACTGGTAGGACC------------------TTAGACGGTG-----------TTT-CCTTGCCTTGTACCTTTG--CTAACCTTCTA-------TT---TTCCTTTCAAGGGTGGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....CATCGAAGGACTCTCGGC......................................................................................................................................................................................1816.006600000
...............CTCTCGGCCTTCCTGCACACCCT.......................................................................................................................................................................2315.005410000
..GCTCATCGAAGGACTCTCGGC......................................................................................................................................................................................2114.004400000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGC...................2514.004101002
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGC...................1913.003300000
.................................................................................................................................................................................TATGAGGGCGCTGGTTACGC........2012.002200000
.............GACTCTCGGCCTTCCTGC..............................................................................................................................................................................1812.002200000
..................................................................................................................................................................................ATGAGGGCGCTGGTTACGC........1912.002010001
.....CATCGAAGGACTCTCGGCC.....................................................................................................................................................................................1911.001100000
..............ACTCTCGGCCTTCCTGCACACCCT.......................................................................................................................................................................2411.001100000
...CTCATCGAAGGACTCTCGGCCT....................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................TCTATGAGGGCGCTGGTTACGC........2211.001010000
..........................................................................................................................................................GGGTGGAGTTCATGAGCAAGTT.............................2221.002000002
...........................................................................................................................................................GGTGGAGTTCATGAGCAAGTT.............................2121.002000002
................................................................................................................................................................................CTATGAGGGCGCTGGTTACGCCTT.....2411.001010000
.................CTCGGCCTTCCTGCACACCCC.......................................................................................................................................................................2111.001100000
...............CTCTCGGCCTTCCTGCACACCCTCC.....................................................................................................................................................................2511.001100000
.........GAAGGACTCTCGGCCTTCCT................................................................................................................................................................................2011.001100000
................................CACCCTCCGCCTGCACTG...........................................................................................................................................................1811.001100000
........................TTCCTGCACACCCTCCGCCTG................................................................................................................................................................2111.001010000
.............GACTCTCGGCCTTCCTGCACACCCT.......................................................................................................................................................................2511.001010000
droWil2
GTCCTTATTGAAGGTCTTTCGGCCTTCTTGCATACCTTGCGTTTGCATTGGTGAGTCGATGG-----CAAAAAAACTTCT----------------A--T--CTTTCT-GTGAGTCTTA--TTTACCTTTTT-------TT---GTCGCTTTCAGGGTGGAATTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTTGAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............GTCTTTCGGCCTTCTTGC..............................................................................................................................................................................1814.00410030
....................................................................................................................................................................CATGAGCAAGTTCTATGAGGG....................2113.00300210
.................................................................................................................................................................ATTCATGAGCAAGTTCTATGAGGG....................2412.00200110
.................................................................................................................................................................ATTCATGAGCAAGTTCTATGAGGGC...................2512.00200110
.................................................................................................................................................................ATTCATGAGCAAGTTCTATGA.......................2112.00200020
..................................................................................................................................................................................ATGAGGGCGCTGGTTACGC........1912.00200020
...............................................................................................................................................................................TCTATGAGGGCGCTGGTTAC..........2011.00100100
...................................................................................................................................................................................TGAGGGCGCTGGTTACGC........1811.00100010
.......................................CGTTTGCATTGGTGAGTCGATGG-----C.........................................................................................................................................2411.00100010
................................................................................................................................................................................CTATGAGGGCGCTGGTTAC..........1911.00100100
......ATTGAAGGTCTTTCGGCC.....................................................................................................................................................................................1811.00110000
GTCCTTATTGAAGGTCTTTCGGC......................................................................................................................................................................................2311.00100010
....................................................................................................................................................................CATGAGCAAGTTCTATGAGGGC...................2211.00100010
.............GTCTTTCGGCCTTCTTGCA.............................................................................................................................................................................1911.00100010
................................................................................................................................................................................CTATGAGGGCGCTGGTTACG.........2011.00100010
.............GTCTTTCGGCCTTCTTGCATACCTTC......................................................................................................................................................................2611.00100010
.....................................................................................................................................................................ATGAGCAAGTTCTATGAGGGC...................2111.00100010
...............................................................................................................................................................GAATTCATGAGCAAGTTCTAT.........................2111.00100100
................................................................................................................................................................AATTCATGAGCAAGTTCTATGAGGGC...................2611.00100100
................................................................................................................................................................................CTATGAGGGCGCTGGTTACGCCT......2311.00100100
...............................ATACCTTGCGTTTGCATT............................................................................................................................................................1820.50100010
droVir3
GTGCTCATTGAGGGTCTCTCGGCCTTTTTGCACACATTGCGCTTGCACTGGTAAGTT--ACT-----CT----------C---G-----AATTC-CA--GAGATTTTT-AAGTTAATTAATTAAATATTT-T-------TTAATT-TACAAACAGGGTCGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................TTTTTGCACACATTGCGCTTGCACTG...........................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...........GGGTCTCTCGGCCTTTTTGCACA...........................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
GTGCTCATTGAGGGTCTCTCG........................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...............................ACACATTGCGCTTGCACTG...........................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
.............GTCTCTCGGCCTTTTTGCACA...........................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
....TCATTGAGGGTCTCTCGGC......................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
..GCTCATTGAGGGTCTCTCGGCCT....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGCGCT................2211.001001000000000000000000000000000000000000000000000000000000000000
..GCTCATTGAGGGTCTCTCGGCCTTTTTG...............................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................CTTTTTGCACACATTGCGCTTGCACT............................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
.....CATTGAGGGTCTCTCGGC......................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGCTCATCGAGGGTCTGTCGGCTTTCTTGCACACACTGCGCTTGCATTGGTGAGTT--TGG-----CG----------A---G-----AATTC-CA--TTCCGTTTT-CAGTCTA------TAACTATTTGATCTA-TTTGATG-TACTTTTAGGGTCGAGTTCATGAGCAAGTTCTATGAGGGCGCCGGCTATGCCTTTGCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................TGCACACACTGCGCTTGCATTG...........................................................................................................................................................2212.002200000
.............................................................................................................................................................................GTTCTATGAGGGCGCCGGCTATGCC.......2512.002100001
...............................................................................................................................................................GAGTTCATGAGCAAGTTCTATGAGG.....................2512.002100001
..GCTCATCGAGGGTCTGTCGGC......................................................................................................................................................................................2112.002000002
..GCTCATCGAGGGTCTGTCGGCTTT...................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................TATGAGGGCGCCGGCTATGCC.......2111.001000001
...........................TTGCACACACTGCGCTTGC...............................................................................................................................................................1911.001100000
.......................................................................................................................................................................GAGCAAGTTCTATGAGGGCGCCGG..............2411.001100000
...........................................................................................................................................................................AAGTTCTATGAGGGCGCCGGCTAT..........2411.001100000
..............................................................................................................................................................CGAGTTCATGAGCAAGTTCTATGAG......................2511.001000001
..GCTCATCGAGGGTCTGTCGGCTTTCT.................................................................................................................................................................................2611.001100000
.......................................................................................................................................................................................GGCGCCGGCTATGCCTTTGC..2011.001100000
.............................GCACACACTGCGCTTGCATTGGGT........................................................................................................................................................2411.001100000
...............................ACACACTGCGCTTGCATTGGGT........................................................................................................................................................2211.001100000
GTGCTCATCGAGGGTCTGTC.........................................................................................................................................................................................2011.001100000
.................................................................................................................................................................GTTCATGAGCAAGTTCTATGAGGGC...................2511.001000001
droGri2
GTGCTCATTGAGGGTCTCTCGGCCTTTTTGCATACATTGCGGTTGCACTGGTATATT--ATATATATTT----------A---A-----AGTTC-CT--CAAATTATT-CAGTTAACTG--ACATGTTTTTAA---A--TT---ATTTTCAACAGGGTCGAGTTCATGAGCAAGTTCTATGAGGGCGCTGGTTACGCCTTCGAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................GCAAGTTCTATGAGGGCGCTGGTT............2411.00101

Generated: 05/17/2015 at 10:41 PM