ID:

dan_564

 Coordinate:

scaffold_12916:6343112-6343262 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.1 -26.6 -26.4

Flybase annnotation

exon [dana_GLEANR_15365:1]; CDS [Dana\GF14601-cds]; intron [Dana\GF14601-in]

No Repeatable elements found

mature
  1. dan_564  scaffold_12916:6343167-6343185 -
  2. scaffold_13335:187936-187954 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGGCCGTTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTGCTCTCCCCACACCCACTTATTGATTTTACTCCTACTCCTCCTCCTCCTGACTCCAATGGAATTTTTCCAAAAAAAAAAAAAGAAGGGGGGGAAGAAGTTCAGTATCCTCCCTAACCCAAGATTCCTAACATTCCTGTCTCTTGAGGCTCCAAAAATGGAATATCTTTCCGTCTATATTTTTTCCTTTTTTTTTT
**************************************************(((.(((.........))).))).((((((....(((.((.((((((((.((...........(((((...)))))...........)).)))))))).)).)))))))))............(((((.................))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 M058
embryo
 V105
male body		 V055
head
 V039
embryo
TGGGCCGTTGGATTCGCACAC...................................................................................................................................................................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0
............................CTACTATGAGAAGGATCCCA........................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 1 0 0
.....................AGCAGCACTACTATGAGAAGGATCCC............................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0
.....................AGCAGCACTACTATGAGAAGGATC.............................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0
......GTTGGATTCGCACACAGC................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0
......GTTGGATTCGCACACAGCAGCACTAC........................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
....CCGTTGGATTCGCACACAGCAGCA............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.....................AGCAGCACTACTATGAGAAGGAGCCC............................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
.........................GCACTACTATGAGAAGGATC.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
.....................AGCAGCACTACTATTAGAAGGATCC............................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
....................CAGCAGCACTACTATGAGAAGGATCC............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0
...................ACAGCAGCACTACTATGAGA.................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.............................TACTATGAGAAGGATCCCA........................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.GGGCCGTTGGATTCGCACACAGCA.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
......GTTTGATTCGCACACAGCAGCACTA............................................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0
...........................ACTACTATGAGAAGGATCCC............................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
...........................ACTACTATGAGAAGGATCCCA........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
............................CTACTATGAGAAGGATCCC............................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0
..............................ACTATGAGAAGGATCCCAA.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
........................AGCACTACTATGAGAAGGATCC............................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
..GGCCGTTGGATTCGCACACAGCA.................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
......................GCAGCACTACTATGAGAAGGATCCCA........................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................CACTACTATGAGAAGGATC.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
....................CAGCAGCACTACTATGAGAAGGATCCC............................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0
......................GCAGCACTACTATGAGAAGGATC.............................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0
.........................GCACTACTATGAGAAGGATCCC............................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
.....................ATCAGCACTACTATGAGAAGGATCCCA........................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
............................................CCCAAGATGAGTGCTCTCCT........................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
.................ACATAGCAGCACTACTATGAGAAG.................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0
..................CACAGCAGCACTACTATGAGAAGGATC.............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
.....................AGCAGCACTACTATTAGAAGGATC.............................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
.....................AGCAGAACTACTCTGAGAAGGATC.............................................................................................................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
.........GGATTCGCACACAGCAGCACTACTATGA...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0
......................GCAGCACTACTATGAGAAGGA................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0
......GTTGGATTCGCACACAGCA.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
..GGCCGTTGGATTCGCACA....................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.GGGCCGTTGGATTCGCACA....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
....................CAGCAGCACTACTATGAGA.................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
................................TATGAGAAGGATCCCAAGC........................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................ACCAAAAAAGAAAAAAGAAGGG........................................................................................................... 22 2 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................AAAAAAAAAAAGAAGGGGG......................................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................AAAAAAAAAAAGAAGGGGGG........................................................................................................ 20 0 2 0.50 1 0 0 1 0 0 0
......................................................................................................................................ATAAGTAGGGCGGGAAGAAGT................................................................................................ 21 3 3 0.33 1 0 0 0 0 1 0
...................................................................................................................................AAAAAAAGAAGGGGAGGAACA................................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0
..............................................CAAGATGAGTGCTCTCTC........................................................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0
..............................................................................GATTTTACTCCAACGCGTCC......................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0 0 0
....................................................................................................ATCCTGACTTCAATGGAAGT................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0
.......................................AGAATCCTAAGGTGAGCG.................................................................................................................................................................................................. 18 3 20 0.10 2 0 0 0 2 0 0
...........................................................................................................................CCAAAAAAAGAAAAAGAAG............................................................................................................. 19 1 11 0.09 1 0 0 0 0 0 1
................................................................................................................................AAAAAAAGAAGAAGGGGG......................................................................................................... 18 1 13 0.08 1 0 0 1 0 0 0
............................................................................................................................CAGAAAACAAAAAAGAAGGG........................................................................................................... 20 2 13 0.08 1 0 0 0 1 0 0
..............................................................................................................................AAAAAAAAAAAAGAAGGG........................................................................................................... 18 0 14 0.07 1 0 0 0 0 0 1
.....................................................................................................................................AAAAAGCAGTGGGGGAAG.................................................................................................... 18 2 15 0.07 1 1 0 0 0 0 0
.............................................................................................................................AAAAAAAAGAAAAGAAGGAGGG........................................................................................................ 22 2 19 0.05 1 0 1 0 0 0 0
.............................................................................................................................AAAAAAAGAGAAAGAAGGGGG......................................................................................................... 21 2 19 0.05 1 0 0 1 0 0 0
.............................................................................................................................AAAAACAAAAAAAGAAGGG........................................................................................................... 19 1 20 0.05 1 0 0 0 0 0 1
...........................................................................................................................CCAAAACAAAAAAAAGAAAGGGC......................................................................................................... 23 3 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................GAAAAAAAAAAAGAAGGG........................................................................................................... 18 1 20 0.05 1 0 0 0 0 0 1
..........................................................................................................................................GAAAGGGGGGAAGAAGG................................................................................................ 17 2 20 0.05 1 0 0 0 0 1 0
.............................................CCAAGATGAGTGCTCTCTT........................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

ACCCGGCAACCTAAGCGTGTGTCGTCGTGATGATACTCTTCCTAGGGTTCCACTCACGAGAGGGGTGTGGGTGAATAACTAAAATGAGGATGAGGAGGAGGAGGACTGAGGTTACCTTAAAAAGGTTTTTTTTTTTTTCTTCCCCCCCTTCTTCAAGTCATAGGAGGGATTGGGTTCTAAGGATTGTAAGGACAGAGAACTCCGAGGTTTTTACCTTATAGAAAGGCAGATATAAAAAAGGAAAAAAAAAA
**************************************************(((.(((.........))).))).((((((....(((.((.((((((((.((...........(((((...)))))...........)).)))))))).)).)))))))))............(((((.................))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M058
embryo
 V039
embryo
ACCCGGCAACCTAAGCTTG........................................................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0
....................................TCTTCCCAGGGTTCCACTAA................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0
......................................................................................................................................................................GGATGGGGCTCTAAGGAT................................................................... 18 2 4 0.25 1 1 0 0
...............................................CTCCACTCACAAGAGGGGTGA....................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0
.....................................................TCACGAGAGGGGCGTGGGGTA................................................................................................................................................................................. 21 3 6 0.17 1 1 0 0
.....................................................................................................................................................TCTTCTAGTAATAGGAGG.................................................................................... 18 2 9 0.11 1 0 0 1
...........................................AGGGTTCCATTAACGATAG............................................................................................................................................................................................. 19 3 20 0.10 2 0 2 0
....................................................................................TGAAGATGAGGAGGAGGAGGACG................................................................................................................................................ 23 2 10 0.10 1 0 1 0
.....................................................TCACGAGAGGGGGGTGGT.................................................................................................................................................................................... 18 2 11 0.09 1 1 0 0
........................................................TGAGAGGGGTGTGGGCGA................................................................................................................................................................................. 18 2 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:6343062-6343312 - dan_564 TGGGCCGTTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTGC-TCT-----------------------------------CCCCA-------CACCCA----------CTTATTGATTTTACTC--------CT------------------------ACTCCTCCTCCTCCTGACTCCAATGGAATTTTTCCAAAA-------AAA-AAAAAAG----AAGGGGGGGAAGAAGTTCAGTATCCTCCCTAACCCAAGATTC-CTA--------A----------CATT-----------CCTGT--------C-----------------------------------------------------------------------------------------------------------------------------T---------CT---T-GAGG--CTCCA--------------AAAATGG----AATATC--TTTCCGTCT--AT--A---TTTTTTCCTTTT--TTT----------TTT
droBip1 scf7180000396568:478148-478370 + TGGGCCGCTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTGC-TC-----------------------------------------------CCACCCA----------CTTATTGATTTTACTCCACCCC--CCCGCT---------------------------------CTGACTCC-ATGGAATTTTCC-AACA-------AAAAAA-AAAGGGGGA---------AGAAGTATAGAATCCTCCCTAACCTAAATGTG-TCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---T-GAGG--CTCCA--------------AAA-TGG----AAATTCC-TTTGG-TTTATAT--A---T--TTTCCCCTT--TTT----------TTT
droKik1 scf7180000302408:364303-364660 + TGGGCCGGTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-AAC----TGGAGTG--GCGGCGCGGCGGCGGGCGGAG-GCCC-------CCACCCG----------CTTATTGATTTTACCCAGGGTCACCT------------------------ACT----------------CC-GTGGAAATTTCC-AAAAG--AGCATAAAAA---A-A----------------------A-A-GTTCTCTAACCTTACTTTC-ACT--------GAGCCC--TTTACAT---------CCCTTAGGGATTTTAA-GCTGTTTAAAGTTATTAATTGTAGGAGATTTCGGATATATATTTTTATTAAATAACTTCCTTTGAATGAAACATAAAATTTAAACCTAGATTTAGGGTAACTCCCCTCTATAATTATCCTC---T---------TC---T-GCA----------------------------------------------------------------------AA---CTTCAATAAAAAATT
droFic1 scf7180000453924:9391-9638 + TGGGCCGTTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTT-GAC-----------------------------------GCCCAGCCAGGCCGCCCA----------GTTATTGATTTTGCTCCA-------T------------------------GCT----------------CC-ATGGAAATTTCC-ATAA-------AAA------AATGGAT------------------A-A-GCCTCCTAACCTAACTTTC-AAC--------AAGTTC--TGGAACT-----------CCTCT--------C-TCTG------------------------------------------------------------------------------------------------------------ACTATTCCT---C---------CC---G-GCGGCACTCCA--------------AAA-GAT-TTTGAAT--A-TCTCC-TTTAAACATT---TT-TTTTCTAGATTTTT----------TTT
droEle1 scf7180000491273:1162325-1162565 - TCGGCCGTTGGATTCGCACACAGCAGCATTACTATGAGAAGGATCCCAAGGTGAGTTTCGTT-----------------------------------GT----CCAGGTCACTCA----------GTTATCGATTTTGC--------------------------------------T----------------CC-ATGGAAATTTCC-AAAA-------AAAAAA----TAGAGT------------------A-G-GCTACCTAACCTTACTTTTATAC--------AGTTTC--TGGAGCT-----------CCTAT--------G-CCTA---------------------------------C--------------------------------------------------------------------------ATTTTTCCC---T---------TA---A-GTAGGCCTCCA--------------AAA-TAG-TTTAAAT--A-TTTCC-TTTATAAATT---TT-TTTTCTACAT-TTT----------TTT
droRho1 scf7180000759283:4498-4730 + TCGGCCGCTGGATTCGTACACAGCAGCACTACTATGAAAAGGATCCCAAGGTGAGTTC-GTC-----------------------------------GTC----CAGGTAACCCT----------CTTATTGATTTTAC--------------------------------------T----------------CC-ATGGAAATTTCC-AAAA-------AAA------AATGGGT------------------G-G-GCTTCCTAACCCAACTTTT-GCA--------GAATTC--TAGAACT-----------CCTAT--------GTCTTT------------------------------------------------------------------------------------------------------------AGTTTTCTT---T---------CA---T-GTTGCCCTCCA--------------AAA-AAG-TT-AAAA--A-TTTTC-TTTATATATT---TT-TTTTCTAAA----T----------TTT
droBia1 scf7180000302408:344130-344370 + TGGGCCGTTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-GAC-------------GC-------------------GGCTCAGCCAGTCCGCCCA----------GTTATTGATTTTAC--------------------------------------T----------------CC-ATGGAATTTTCC-AAGC-------TA-------TGAGGAT-----------------AG-C-GCCACCTAACCTTACTTAA-TCC--------GAGTTC--CGGATC------------CCTAT--------A-TCGG------------------------------------------------------------------------------------------------------------ATTTAGCCT---G---------CCT--TGGT-G-CCTCCA--------------AAAACAG-TTCAAAA--T-TTTCC-CTTATATATA---T--TTTTCTAAA--TTT----------TTT
droTak1 scf7180000415779:615794-616034 + TGGGCCGTTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTCC-AGG-----------------------------------TGACAACCA-GCCACCCA----------TTTATTGATTTTAC--------------------------------------T----------------CC-ATGGAATTTTCC-AAAAA--AGT----ACG--AAGTGGTT------------------G-G-GCCACCTAACCTAACTTTA-CCC--------GAGTTC--CGGATC------------CCTAT--------A-TCGG------------------------------------------------------------------------------------------------------------TCTTACCCT---G---------CCTTTT-GA-A-CCTCCA--------------AAA-CAA-TTCAAAA--A-TTTCC-TTTATAT--A---TTTTTTT-CAAA--TTT----------TTT
droEug1 scf7180000409554:3905165-3905395 + TCGGCCGTTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTTC-AAT-----------------------------------GCCCAGTTAGGCCGCCCA----------GTTATTGATTTTAC--------------------------------------T----------------TC-ATGGAATTTTCC-AAAA-------AAA------A-----------------------------AAATCTAACCTAACTTTG-ACA--------TAGTTG--AGGACCT-----------TCTAT--------A-TCTA------------------------------------------------------------------------------------------------------------ATTTTTCCT---G---------AC---T-GTAAAACTCCA--------------AAA-GTG-TTTAAAA--A-TTTCC-TTTATATATA---TTTTTTTCTAAA--TTT----------TAT
dm3 chr2L:2131205-2131441 + TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CGC-----------------------------------GCCCATCCAGGCCACCCA----------CTTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------AGA------AGTGGTC------------------G-G-ACCACCTAACCTAACTTTA-TCC--------GGGCTC--TGGAGTT-----------CTTAG--------G-CCTG------------------------------------------------------------------------------------------------------------ATTATCCCT---T---------CC---T-GCGGCA-ACCA--------------AAA-CTT-TTGAAAT--AATTTCC-TTTG-AAATA---TTTTTTCCT-AA--ATT----------TCT
droSim2 2l:2024551-2024787 + TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CGC-----------------------------------GCCCAGCCAGGCCACCCA----------ATTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------AA-------AGTGGTC------------------G-G-ACCACCTAACCTAACTTTG-TCC--------GGGCTC--TGGACTT-----------CTGGA--------GGCCTG------------------------------------------------------------------------------------------------------------ATTATCCCT---T---------CC---T-GCGGCA-ACCA--------------AAA-CTT-TTCAAAA--AATTTCC-TTTG-AAATA---TTTTTT-CCGAA--ATT----------TCT
droSec2 scaffold_14:2060645-2060880 + TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CGC-----------------------------------CCCCAGCCAGGCCACCCA----------ATTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------AA-------AGTGGTC------------------G-G-ACCACCTAACCTAACTTTG-TCC--------GGGCTT--TGGAGTT-----------CTGGA--------A-GCTG------------------------------------------------------------------------------------------------------------ATTATCCCTT--T---------CC---T-GCGGCA-ACCA--------------AAA-CTT-TTCAAAA--AATTTCC-TTTG-AAATA---TT-TTT-CCGAA--ATT----------TCT
droYak3 2L:2102658-2102894 + TCGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CAC-----------------------------------GCCCAGCCAGGCCACCCA----------GTTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------CGA------AGTGCTT------------------G-G-ACCACCTAACCTAACTTTG-TCC--------GGGCTC--TGGTGTT-----------CCACT--------G-CCTG------------------------------------------------------------------------------------------------------------ATTATCCCT---T---------CC---T-GTGGCA-CTCA--------------AAA-CAG-TTCAATT--AATTTCC-TTAG-AAATA---TTTTTT-CCGAA--ATT----------TCT
droEre2 scaffold_4929:2165535-2165776 + TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CAC-----------------------------------GCCCAGCCAGGCCACCCA----------GTTATTGATTTACA-----------T------------------------AGG----------------CC-GTGGAATTTTCC-AAAA-------AGC------AGTGGTT------------------G-G-ACCACCTAACCTTACTTTG-TCC--------GGGCTC--TGGTGGC-----------CTTTG--------G-CCTG------------------------------------------------------------------------------------------------------------ATTAACCCT---C---------TC---T-GCGGCA-TTGA--------------AAA-CAG-TTCAAAT--AATTCAC-TTAG-AAATA---TTTTTTTCCGAA--ATT----------TCT
dp5 4_group3:4312062-4312307 - TTGGACGCTGGATACGCACACAGCAGCACTACTACGAAAAGGATCCCAAGGTAAGTGT-TAC----CT---------------------------C-CCCCCCTTACCCCACTCC---ATTGAGGGCTATTGATTTAACTC--------CC------------------------ACT----------------TC-ATGGAAATTTCC-CAAA-------AAAACA---------------------------------AAACGTAACCTAACTTTT-TCC--------CTGCCT--TG-ACCC-----------CCGAA--------A-TGTG----------------------------------------------------------------------------------------------------------------------TG-CGCGCTCCA---------GG--C--TAAAAGAGCCCATAGAAAA-TGGATTCAA------TTTAT-TTTATAT--TCCATTTT-------T--TTT----------TTT
droPer2 scaffold_1:5794251-5794482 - TTGGACGCTGGATACGCACACAGCAGCACTACTACGAAAAGGATCCCAAGGTAAGTAC-CCC-----------------------------------AC-------------TCC---ATTGAGGGCTATTGATTTTACTC--------CC------------------------ACT----------------TC-ATGGAAATTTCC-CAAA-------AAAACA---------------------------------AAACGTAACCTAACTTTT-GCT--------CTGCCT--TTGACCC-----------CCGAA--------A-TGTG----------------------------------------------------------------------------------------------------------------------TG-CGCGCTCCA---------GG--C--TAAAAGAGCCCATAGAAAA-TGGATTCAA------TTTAT-TTTATAT--TCCATTTT------TT--ATT----------TTT
droWil2 scf2_1100000004521:2061587-2061643 + TTGGACGCTGGATCCGTACACAGCAGCATTACTATGAAAAGGATCCCAAGGTGAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:7839668-7839929 + dvi_10795 TCGGACGCTGGATACGCACACAGCAGCACTATTACGAGAAGGATCCCAAGGTTAGTCA-GTGTTACCA---------------------------G-CCCC-------TTTTGCG----------ATTATTGATTTTATGCGAGTGC--GTGTGTGTGTGTGTGTGTGTGTGTGTGCT----------------GG-CTGGTATTTTCC-AAGA-------ACA------AAAAAAG------------------A-A-AATACCTAACCCAACTTTT-GTT--------GCGCCT--TTGGCAA-----AAAA--AGGAA--------A------------------------------------------------------------------------------------------------------------------------------CGAGGTCAA---------TG--T--TAAA--------------A-GGC-TTTC--TTCA-TTTTG-TTCTTATTTT---TT-TTTTTTTAA---------------TTT
droMoj3 scaffold_6500:3011193-3011405 - TCGGCCGCTGGATACGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTTAGTTG-ACA------------------------------------------------ACCCTCTCTGTCTGGATTATTGATTTTATTTAGTG-C--G--------------------------------------------TA-CTCGAATTTTCC-AAATGCCACCGAAAAAT---------------------------------AAACCTAACCCAACTTTG-ACTTCGAAAAGGAGGCC--AATGTTA---------GCCTTTG--------G-GTTT------------------------------------------------------------------------------------------------------------CTTA-------------------------------------------------------------------A-TTTTT-TCGG--G---TCATTTT------TT--TTT----------CGT
droGri2 scaffold_15252:10921529-10921745 + TCGGACGCTGGATACGCACACAGCAGCATTACTATGAAAAGGACCCCAAGGTTAGTTA-CCA-----------ACTC-------------------CCCCCCTTCTTTTTTTTCG----------AATATCGATTTTAATT--------CG-------------------------------------------AA-GTGGAG-----C-AAAA-------AAA-AA----AA----------------------A-A-ATAACCTAACCCAACTTTC-GTT--------ACACTTTTTGGAACTGGTTAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATCTGTAGTT---TG-----GCTT--GATTCGA-TTTG-ATTTC---TTT-------TT--TTT----------TTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGGGCCGTTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTGC-TCT-----------------------------------CCCCA-------CACCCA----------CTTATTGATTTTACTC--------CT------------------------ACTCCTCCTCCTCCTGACTCCAATGGAATTTTTCCAAAA-------AAA-AAAAAAG----AAGGGGGGGAAGAAGTTCAGTATCCTCCCTAACCCAAGATTC-CTA--------A----------CATT-----------CCTGT--------C-----------------------------------------------------------------------------------------------------------------------------T---------CT---T-GAGG--CTCCA--------------AAAATGG----AATATC--TTTCCGTCT--AT--A---TTTTTTCCTTTT--TTT----------TTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
TGGGCCGTTGGATTCGCACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
............................CTACTATGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000011
.....................AGCAGCACTACTATGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
.....................AGCAGCACTACTATGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000002
......GTTGGATTCGCACACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002020000
......GTTGGATTCGCACACAGCAGCACTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....CCGTTGGATTCGCACACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................GCACTACTATGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....................CAGCAGCACTACTATGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100
...................ACAGCAGCACTACTATGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................TACTATGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.GGGCCGTTGGATTCGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................ACTACTATGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................ACTACTATGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
............................CTACTATGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..............................ACTATGAGAAGGATCCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................AGCACTACTATGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..GGCCGTTGGATTCGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......................GCAGCACTACTATGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..........................CACTACTATGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................CAGCAGCACTACTATGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100
......................GCAGCACTACTATGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
.........................GCACTACTATGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................CACAGCAGCACTACTATGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.........GGATTCGCACACAGCAGCACTACTATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
......................GCAGCACTACTATGAGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......GTTGGATTCGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..GGCCGTTGGATTCGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.GGGCCGTTGGATTCGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
....................CAGCAGCACTACTATGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
................................TATGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
....................................................................................................................................................................................................................AA-------AAA-AAAAAAG----AAGGGGG..................................................................................................................................................................................................................................................................................................................................1920.501010000
....................................................................................................................................................................................................................AA-------AAA-AAAAAAG----AAGGGGGG.................................................................................................................................................................................................................................................................................................................................2020.501010000
...................................................................................................................................................................................................................AAA-------AAA-AAAAAAG----AAGGG....................................................................................................................................................................................................................................................................................................................................18140.071001000
droBip1
TGGGCCGCTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTGC-TC-----------------------------------------------CCACCCA----------CTTATTGATTTTACTCCACCCC--CCCGCT---------------------------------CTGACTCC-ATGGAATTTTCC-AACA-------AAAAAA-AAAGGGGGA---------AGAAGTATAGAATCCTCCCTAACCTAAATGTG-TCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---T-GAGG--CTCCA--------------AAA-TGG----AAATTCC-TTTGG-TTTATAT--A---T--TTTCCCCTT--TTT----------TTTSizeHit CountTotal NormTotal
No Reads
droKik1
TGGGCCGGTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-AAC----TGGAGTG--GCGGCGCGGCGGCGGGCGGAG-GCCC-------CCACCCG----------CTTATTGATTTTACCCAGGGTCACCT------------------------ACT----------------CC-GTGGAAATTTCC-AAAAG--AGCATAAAAA---A-A----------------------A-A-GTTCTCTAACCTTACTTTC-ACT--------GAGCCC--TTTACAT---------CCCTTAGGGATTTTAA-GCTGTTTAAAGTTATTAATTGTAGGAGATTTCGGATATATATTTTTATTAAATAACTTCCTTTGAATGAAACATAAAATTTAAACCTAGATTTAGGGTAACTCCCCTCTATAATTATCCTC---T---------TC---T-GCA----------------------------------------------------------------------AA---CTTCAATAAAAAATTSizeHit CountTotal NormTotal
No Reads
droFic1
TGGGCCGTTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTT-GAC-----------------------------------GCCCAGCCAGGCCGCCCA----------GTTATTGATTTTGCTCCA-------T------------------------GCT----------------CC-ATGGAAATTTCC-ATAA-------AAA------AATGGAT------------------A-A-GCCTCCTAACCTAACTTTC-AAC--------AAGTTC--TGGAACT-----------CCTCT--------C-TCTG------------------------------------------------------------------------------------------------------------ACTATTCCT---C---------CC---G-GCGGCACTCCA--------------AAA-GAT-TTTGAAT--A-TCTCC-TTTAAACATT---TT-TTTTCTAGATTTTT----------TTTSizeHit CountTotal NormTotal
No Reads
droEle1
TCGGCCGTTGGATTCGCACACAGCAGCATTACTATGAGAAGGATCCCAAGGTGAGTTTCGTT-----------------------------------GT----CCAGGTCACTCA----------GTTATCGATTTTGC--------------------------------------T----------------CC-ATGGAAATTTCC-AAAA-------AAAAAA----TAGAGT------------------A-G-GCTACCTAACCTTACTTTTATAC--------AGTTTC--TGGAGCT-----------CCTAT--------G-CCTA---------------------------------C--------------------------------------------------------------------------ATTTTTCCC---T---------TA---A-GTAGGCCTCCA--------------AAA-TAG-TTTAAAT--A-TTTCC-TTTATAAATT---TT-TTTTCTACAT-TTT----------TTTSizeHit CountTotal NormTotal
No Reads
droRho1
TCGGCCGCTGGATTCGTACACAGCAGCACTACTATGAAAAGGATCCCAAGGTGAGTTC-GTC-----------------------------------GTC----CAGGTAACCCT----------CTTATTGATTTTAC--------------------------------------T----------------CC-ATGGAAATTTCC-AAAA-------AAA------AATGGGT------------------G-G-GCTTCCTAACCCAACTTTT-GCA--------GAATTC--TAGAACT-----------CCTAT--------GTCTTT------------------------------------------------------------------------------------------------------------AGTTTTCTT---T---------CA---T-GTTGCCCTCCA--------------AAA-AAG-TT-AAAA--A-TTTTC-TTTATATATT---TT-TTTTCTAAA----T----------TTTSizeHit CountTotal NormTotal
No Reads
droBia1
TGGGCCGTTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-GAC-------------GC-------------------GGCTCAGCCAGTCCGCCCA----------GTTATTGATTTTAC--------------------------------------T----------------CC-ATGGAATTTTCC-AAGC-------TA-------TGAGGAT-----------------AG-C-GCCACCTAACCTTACTTAA-TCC--------GAGTTC--CGGATC------------CCTAT--------A-TCGG------------------------------------------------------------------------------------------------------------ATTTAGCCT---G---------CCT--TGGT-G-CCTCCA--------------AAAACAG-TTCAAAA--T-TTTCC-CTTATATATA---T--TTTTCTAAA--TTT----------TTTSizeHit CountTotal NormTotal
No Reads
droTak1
TGGGCCGTTGGATTCGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTCC-AGG-----------------------------------TGACAACCA-GCCACCCA----------TTTATTGATTTTAC--------------------------------------T----------------CC-ATGGAATTTTCC-AAAAA--AGT----ACG--AAGTGGTT------------------G-G-GCCACCTAACCTAACTTTA-CCC--------GAGTTC--CGGATC------------CCTAT--------A-TCGG------------------------------------------------------------------------------------------------------------TCTTACCCT---G---------CCTTTT-GA-A-CCTCCA--------------AAA-CAA-TTCAAAA--A-TTTCC-TTTATAT--A---TTTTTTT-CAAA--TTT----------TTTSizeHit CountTotal NormTotal
No Reads
droEug1
TCGGCCGTTGGATTCGCACACAGCAGCACTACTATGAGAAGGATCCCAAGGTGAGTTC-AAT-----------------------------------GCCCAGTTAGGCCGCCCA----------GTTATTGATTTTAC--------------------------------------T----------------TC-ATGGAATTTTCC-AAAA-------AAA------A-----------------------------AAATCTAACCTAACTTTG-ACA--------TAGTTG--AGGACCT-----------TCTAT--------A-TCTA------------------------------------------------------------------------------------------------------------ATTTTTCCT---G---------AC---T-GTAAAACTCCA--------------AAA-GTG-TTTAAAA--A-TTTCC-TTTATATATA---TTTTTTTCTAAA--TTT----------TATSizeHit CountTotal NormTotal
No Reads
dm3
TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CGC-----------------------------------GCCCATCCAGGCCACCCA----------CTTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------AGA------AGTGGTC------------------G-G-ACCACCTAACCTAACTTTA-TCC--------GGGCTC--TGGAGTT-----------CTTAG--------G-CCTG------------------------------------------------------------------------------------------------------------ATTATCCCT---T---------CC---T-GCGGCA-ACCA--------------AAA-CTT-TTGAAAT--AATTTCC-TTTG-AAATA---TTTTTTCCT-AA--ATT----------TCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
TGGGCCGCTGGATTCGCACGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCACTACTACGAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000100001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCCGCTGGATTCGCACGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCCGCTGGATTCGCACGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCCGCTGGATTCGCACGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACTACTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.............TCGCACGCAGCAGCACTACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................C--------GGGCTC--TGGAGTT-----------CTTAG--------G-C.........................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCACTACTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGCTGGATTCGCACGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGCCGCTGGATTCGCACGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCACGCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCACTACTACGAGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCACTACTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TACTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000
...............GCACGCAGCAGCACTACTACGAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCAGCAGCACTACTACGAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCCGCTGGATTCGCACGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCGCTGGATTCGCACGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTACTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........GGATTCGCACGCAGCAGCACTACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCAGCAGCACTACTACGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCAGCAGCACTACTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATTCGCACGCAGCAGCACTACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGCACGCAGCAGCACTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGGATTCGCACGCAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGCCGCTGGATTCGCACGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCGCTGGATTCGCACGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCACTACTACGAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGATTCGCACGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............GCACGCAGCAGCACTACTACGAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACTACTACGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................ACTACTACGAGAAGGATCCCAAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
TGGGCCGCTGGATTCGCACGCAGCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACTACGAGAAGGATCCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTGGATTCGCACGCAGCAGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCAGCAGCACTACTACGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATCCCAAGGTGAGTTC-CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................CACGCAGCAGCACTACTACGAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGCTGGATTCGCACGCAGCAGCACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................C--TGGAGTT-----------CTTAG--------G-CCTG------------------------------------------------------------------------------------------------------------ATT.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAGCAGCACTACTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCACGCAGCAGCACTACTACGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCAGCAGCACTACTACGAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACGCAGCAGCACTACTACGAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGGCCGCTGGATTCGCACGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTACGAGAAGGATCCCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................ACGCAGCAGCACTACTACGAGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGATTCGCACGCAGCAGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGATTCGCACGCAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCGCTGGATTCGCACGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGCACGCAGCAGCACTACTACGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCACTACTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAGCAGCACTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............TCGCACGCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....CCGCTGGATTCGCACGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCAGCAGCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACGCAGCAGCACTACTACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCACTACTACGAGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGATTCGCACGCAGCAGCACTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCGCTGGATTCGCACGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGCACGCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCACTACTACGAGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCACTACTACGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCACGCAGCAGCACTACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGCTGGATTCGCACGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGGCCGCTGGATTCGCACGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CCTAACCTAACTTTA-TCC--------G..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGATTCGCACGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TATTGATTT-A--------------------------------------GT----------------CC-GTGGA...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCAGCAGCACTACTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTGGATTCGCACGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACTACTACGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCACTACTACGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AAA-------AGA------AGTGGTC------------------G-G-ACCACCT...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGCACGCAGCAGCACTACTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACTACTACGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCACTACTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACGAGAAGGATCCCAAGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droSim2
TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CGC-----------------------------------GCCCAGCCAGGCCACCCA----------ATTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------AA-------AGTGGTC------------------G-G-ACCACCTAACCTAACTTTG-TCC--------GGGCTC--TGGACTT-----------CTGGA--------GGCCTG------------------------------------------------------------------------------------------------------------ATTATCCCT---T---------CC---T-GCGGCA-ACCA--------------AAA-CTT-TTCAAAA--AATTTCC-TTTG-AAATA---TTTTTT-CCGAA--ATT----------TCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................TACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000000200000000
...........................ACTACTACGAGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000020000000000
......................GCAGCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................AACTTTG-TCC--------GGGCTC--TGGACT.....................................................................................................................................................................................................................................................................2211.00110000000000000000
.......................................................................................................................................................................................................................................................................................................C--TGGACTT-----------CTGGA--------GGCCT.......................................................................................................................................................................................................................................1811.00101000000000000000
...........................................................................................................................................................................................................................................................................ACCTAACTTTG-TCC--------GGGCTC--T..........................................................................................................................................................................................................................................................................2111.00110000000000000000
.........................GCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
.GGGCCGCTGGATTCGCACGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........GATTCGCACGCAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
..............................ACTACGAGAAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000100000000
droSec2
TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CGC-----------------------------------CCCCAGCCAGGCCACCCA----------ATTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------AA-------AGTGGTC------------------G-G-ACCACCTAACCTAACTTTG-TCC--------GGGCTT--TGGAGTT-----------CTGGA--------A-GCTG------------------------------------------------------------------------------------------------------------ATTATCCCTT--T---------CC---T-GCGGCA-ACCA--------------AAA-CTT-TTCAAAA--AATTTCC-TTTG-AAATA---TT-TTT-CCGAA--ATT----------TCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CACTACTACGAGAAGGATCCCAAGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.............................TACTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.............TCGCACGCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5011000
droYak3
TCGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CAC-----------------------------------GCCCAGCCAGGCCACCCA----------GTTATTGATTT-A--------------------------------------GT----------------CC-GTGGAATTTTCC-AAAA-------CGA------AGTGCTT------------------G-G-ACCACCTAACCTAACTTTG-TCC--------GGGCTC--TGGTGTT-----------CCACT--------G-CCTG------------------------------------------------------------------------------------------------------------ATTATCCCT---T---------CC---T-GTGGCA-CTCA--------------AAA-CAG-TTCAATT--AATTTCC-TTAG-AAATA---TTTTTT-CCGAA--ATT----------TCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................AGCAGCACTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
........TGGATTCGCACGCAGCAGCACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000
..GGCCGCTGGATTCGCACGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................CAGCAGCACTACTACGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................AGCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........GATTCGCACGCAGCAGCACTACTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.................ACGCAGCAGCACTACTACGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.....................AGCAGCACTACTACGAGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
........................AGCACTACTACGAGAAGGATCCCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................................................................................................................................................................................................................................................................TCC--------GGGCTC--TGGTGTT-----------CCACT--------G-CC........................................................................................................................................................................................................................................2411.00101000000000
............................CTACTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..............................ACTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................CTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
TGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAAGGTGAGTTC-CAC-----------------------------------GCCCAGCCAGGCCACCCA----------GTTATTGATTTACA-----------T------------------------AGG----------------CC-GTGGAATTTTCC-AAAA-------AGC------AGTGGTT------------------G-G-ACCACCTAACCTTACTTTG-TCC--------GGGCTC--TGGTGGC-----------CTTTG--------G-CCTG------------------------------------------------------------------------------------------------------------ATTAACCCT---C---------TC---T-GCGGCA-TTGA--------------AAA-CAG-TTCAAAT--AATTCAC-TTAG-AAATA---TTTTTTTCCGAA--ATT----------TCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................AGCAGCACTACTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000130
.....................AGCAGCACTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000200
......GCTGGATTCGCACGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........GGATTCGCACGCAGCAGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..........GATTCGCACGCAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
............................CTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...........ATTCGCACGCAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
............................CTACTACGAGAAGGATCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
................CACGCAGCAGCACTACTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.....................AGCAGCACTACTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.GGGCCGCTGGATTCGCACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
dp5
TTGGACGCTGGATACGCACACAGCAGCACTACTACGAAAAGGATCCCAAGGTAAGTGT-TAC----CT---------------------------C-CCCCCCTTACCCCACTCC---ATTGAGGGCTATTGATTTAACTC--------CC------------------------ACT----------------TC-ATGGAAATTTCC-CAAA-------AAAACA---------------------------------AAACGTAACCTAACTTTT-TCC--------CTGCCT--TG-ACCC-----------CCGAA--------A-TGTG----------------------------------------------------------------------------------------------------------------------TG-CGCGCTCCA---------GG--C--TAAAAGAGCCCATAGAAAA-TGGATTCAA------TTTAT-TTTATAT--TCCATTTT-------T--TTT----------TTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......CTGGATACGCACACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
........TGGATACGCACACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................TACTACGAAAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.TGGACGCTGGATACGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000010
...........................ACTACTACGAAAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................TACTACGAAAAGGATCCCAAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..GGACGCTGGATACGCACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................ACTACGAAAAGGATCCCAAGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
droPer2
TTGGACGCTGGATACGCACACAGCAGCACTACTACGAAAAGGATCCCAAGGTAAGTAC-CCC-----------------------------------AC-------------TCC---ATTGAGGGCTATTGATTTTACTC--------CC------------------------ACT----------------TC-ATGGAAATTTCC-CAAA-------AAAACA---------------------------------AAACGTAACCTAACTTTT-GCT--------CTGCCT--TTGACCC-----------CCGAA--------A-TGTG----------------------------------------------------------------------------------------------------------------------TG-CGCGCTCCA---------GG--C--TAAAAGAGCCCATAGAAAA-TGGATTCAA------TTTAT-TTTATAT--TCCATTTT------TT--ATT----------TTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................CTACTACGAAAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....ACGCTGGATACGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................CTACTACGAAAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................CTACTACGAAAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..GGACGCTGGATACGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................CTACGAAAAGGATCCCAAGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
droWil2
TTGGACGCTGGATCCGTACACAGCAGCATTACTATGAAAAGGATCCCAAGGTGAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................AGCAGCATTACTATGAAAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200110
.TGGACGCTGGATCCGTACACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
............TCCGTACACAGCAGCATTACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
......................GCAGCATTACTATGAAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.....................AGCAGCATTACTATGAAAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.......CTGGATCCGTACACAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............GTACACAGCAGCATTACTATGAAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.............CCGTACACAGCAGCATTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
TCGGACGCTGGATACGCACACAGCAGCACTATTACGAGAAGGATCCCAAGGTTAGTCA-GTGTTACCA---------------------------G-CCCC-------TTTTGCG----------ATTATTGATTTTATGCGAGTGC--GTGTGTGTGTGTGTGTGTGTGTGTGTGCT----------------GG-CTGGTATTTTCC-AAGA-------ACA------AAAAAAG------------------A-A-AATACCTAACCCAACTTTT-GTT--------GCGCCT--TTGGCAA-----AAAA--AGGAA--------A------------------------------------------------------------------------------------------------------------------------------CGAGGTCAA---------TG--T--TAAA--------------A-GGC-TTTC--TTCA-TTTTG-TTCTTATTTT---TT-TTTTTTTAA---------------TTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........GATACGCACACAGCAGCACTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................CACTATTACGAGAAGGATCCCAAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....CGCTGGATACGCACACAGCAGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................TACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.CGGACGCTGGATACGCACACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....................AGCAGCACTATTACGAGAAGGATCCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
.........................GCACTATTACGAGAAGGATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..........................CACTATTACGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.CGGACGCTGGATACGCACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..GGACGCTGGATACGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................GCACTATTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........GATACGCACACAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...............................TTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..............................ATTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.CGGACGCTGGATACGCACACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
............TACGCACACAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.CGGACGCTGGATACGCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..GGACGCTGGATACGCACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..............................ATTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
......................GCAGCACTATTACGAGAAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..GGACGCTGGATACGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................GCAGCACTATTACGAGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...GACGCTGGATACGCACACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..............................ATTACGAGAAGGATCCCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TTGATTTTATGCGAGTGC--GTG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........GATACGCACACAGCAGCACTATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
........TGGATACGCACACAGCAGCACTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
TCGGACGCTGGATACGCACACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
......GCTGGATACGCACACAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....CGCTGGATACGCACACAGCAGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........ATACGCACACAGCAGCACTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......GCTGGATACGCACACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................TATTACGAGAAGGATCCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
.........................GCACTATTACGAGAAGGATCCCAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
..................................CGAGAAGGATCCCAAGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................GTGTGTGTGTGTGTGTGCT----------------...................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000001
droMoj3
TCGGCCGCTGGATACGCACACAGCAGCACTACTACGAGAAGGATCCCAAGGTTAGTTG-ACA------------------------------------------------ACCCTCTCTGTCTGGATTATTGATTTTATTTAGTG-C--G--------------------------------------------TA-CTCGAATTTTCC-AAATGCCACCGAAAAAT---------------------------------AAACCTAACCCAACTTTG-ACTTCGAAAAGGAGGCC--AATGTTA---------GCCTTTG--------G-GTTT------------------------------------------------------------------------------------------------------------CTTA-------------------------------------------------------------------A-TTTTT-TCGG--G---TCATTTT------TT--TTT----------CGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................ACTACTACGAGAAGGATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......CTGGATACGCACACAGCAGCACTACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................GCAGCACTACTACGAGAAGGATCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droGri2
TCGGACGCTGGATACGCACACAGCAGCATTACTATGAAAAGGACCCCAAGGTTAGTTA-CCA-----------ACTC-------------------CCCCCCTTCTTTTTTTTCG----------AATATCGATTTTAATT--------CG-------------------------------------------AA-GTGGAG-----C-AAAA-------AAA-AA----AA----------------------A-A-ATAACCTAACCCAACTTTC-GTT--------ACACTTTTTGGAACTGGTTAAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATCTGTAGTT---TG-----GCTT--GATTCGA-TTTG-ATTTC---TTT-------TT--TTT----------TTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................AGCATTACTATGAAAAGGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/17/2015 at 10:44 PM