ID:

dan_56

 Coordinate:

scaffold_13340:7215208-7215271 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.2 -35.6 -35.6

Flybase annnotation

Antisense to pre_miRNA [Dana\mir-iab-4-RM]; utr3 [utr3_minus_7917]; Antisense to miRNA [Dana\miR-iab-4-3p-RB]; Antisense to miRNA [Dana\miR-iab-4-5p-RA]

No Repeatable elements found

Sense Strand Reads

ATTTCAGAATATTAAGTTTTCACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATCCTCCGTAATGTTCTAGTGCTGCAATTAAAGA

***********************************..((((.((.((((((.((((((((((((.((((.((....((......))..)))))).)))))))))))))))))).)).))))....*************************************** 		Read size # Mismatch Hit Count Total Norm Total V105

male body		 M044

female body

 M058

embryo

 V106

head

 V055

head

 V039

embryo
..................................................TTACGTATACTGAAGGTAT............................................................................................... 19 0 1 232.00 232 153 44 0 25 10 0
..................................................TTACGTATACTGAAGGTATACC............................................................................................ 22 0 1 89.00 89 3 29 44 6 5 2
..................................................TTACGTATACTGAAGGTATACCGG.......................................................................................... 24 0 1 47.00 47 0 33 3 8 3 0
..................................................TTACGTATACTGAAGGTATA.............................................................................................. 20 0 1 45.00 45 8 25 4 8 0 0
..................................................TTACGTATACTGAAGGTATAC............................................................................................. 21 0 1 29.00 29 2 20 7 0 0 0
..................................................TTACGTATACTGAAGGTATACCGT.......................................................................................... 24 1 1 19.00 19 12 3 0 4 0 0
................................................TGTTACGTATACTGAAGGTAT............................................................................................... 21 0 1 18.00 18 11 3 0 3 1 0
..................................................TTACGTATACTGAAGGTATACCGGT......................................................................................... 25 1 1 11.00 11 3 3 0 4 1 0
..................................................TTACGTATACTGAAGGTATACCG........................................................................................... 23 0 1 10.00 10 3 6 0 1 0 0
...........................................................................................TACATTCAGTATACGTATACGT................................................... 22 1 1 6.00 6 6 0 0 0 0 0
...................................................TACGTATACTGAAGGTAT............................................................................................... 18 0 1 4.00 4 0 4 0 0 0 0
...................................................TACGTATACTGAAGGTATACC............................................................................................ 21 0 1 4.00 4 0 3 1 0 0 0
..................................................TTACGTATACTGAAGGTATT.............................................................................................. 20 1 1 4.00 4 2 1 1 0 0 0
........................................................................................GGATACATTCAGTATACGTATA...................................................... 22 0 1 4.00 4 0 1 3 0 0 0
..................................................TTACGTATTCTGAAGGTATA.............................................................................................. 20 1 1 3.00 3 0 3 0 0 0 0
..................................................TTACGTATGCTGAAGGTATA.............................................................................................. 20 1 1 3.00 3 0 3 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGT......................................................... 20 0 1 3.00 3 3 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGGA......................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0
...................................................TACGTATACTGAAGGTATACCG........................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0
..................................................TGACGTATACTGAAGGTATACC............................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
...................................................TACGTATACTGAAGGTATA.............................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0
..................................................TTACGTATCCTGAAGGTATACCGG.......................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0
..................................................TTATGTATACTGAAGGTATA.............................................................................................. 20 1 2 1.00 2 0 0 1 1 0 0
..................................................TTACGTATACTGAAGGGAT............................................................................................... 19 1 1 1.00 1 0 0 0 0 1 0
..................................................TTACGTATACTTAAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................GTACGTATACTGAAGGTAT............................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCA........................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACCGAAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................AGGATACATTCAGTATACGTAT....................................................... 22 0 1 1.00 1 0 1 0 0 0 0
..........................................................................ATGCGATACAATCAGGATACATTC.................................................................. 24 3 1 1.00 1 1 0 0 0 0 0
........................................................................................GGATACATTCAGTATACGTAT....................................................... 21 0 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACCGAAGGTATA.............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTAGACTGAAGGTATAC............................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1
..................................................TTACGTATACTGAAGATAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATAACGT.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGTTG........................................................................................ 26 3 1 1.00 1 1 0 0 0 0 0
....................................................ACGTATACTGAAGGTATACC............................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAAGGAATACCGG.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAATGTAT............................................................................................... 19 1 2 1.00 2 2 0 0 0 0 0
..................................................TTACGTATACTGAAGGCATACC............................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1
..................................................TTACGTATACTGAAGGTATACCGGTGT....................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATGCTGAAGGTATACTG........................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGCAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTATGTATACTGAAGGTATAC............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
........................................................................................GTATACATTCAGTATACGTATA...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTAAAGGTATACC............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.................................................CGTACGTATACTGAAGGTATA.............................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0
...................................................TACGTATACTGAAGGTATACCGTT......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
................................................TGTTACGTATACTGAAGGGAT............................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
................................................TGTTACGTATACTGAAGGTAG............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................ATGATACATTCAGTATACGTATA...................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATGCTGAAGGTATACC............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
................................................TGTTACGTATACTGAAGGTATT.............................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATATTGAAGGTATACC............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.................................................CTTACGTATACTGAAGGTATACC............................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
.......................................................................................AGGATGCATTCAGTATACGTATA...................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAGGCAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACGGAAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATAA............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.................................................................................ACACTCAGGATACATTCAG................................................................ 19 0 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAGCTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTAGGTATACTGAAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATGCTGAAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACCGC.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.....................................................CGTATACTGAAGGTATACCGG.......................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
................................................TGTTACGTATACTGAAGGTATACC............................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
..................................................TTACGTATACTGAAGGTAC............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTACT.............................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0
..................................................TGATGTATACTGAAGGTATACC............................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..................................................GTACGTATACTGAAGGTATACCGG.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGAAGGTATACGGG.......................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.................................................CTTACGTATACTGAAGGTATACCGG.......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..................................................TCACGTATACTGAAGGTATACC............................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
..................................................TGACGTATACTGAAGGTATACCGGT......................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0
..................................................TTACTTATACTGAAGGTAT............................................................................................... 19 1 1 1.00 1 0 0 0 1 0 0
...................................................TACGTATACTGAAGGTATAC............................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
..................................................TTACGGATACTGAAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
................................................TGTTACGTATACTGAAGGTATG.............................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTATACTGTAGGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAAGGTATACAG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTACGTATACTGAACGTATAC............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TTACGTCTACTGAAGGTATACCGGA......................................................................................... 25 1 1 1.00 1 0 0 0 0 0 1
..................................................TTACGTATACTGAAAGTAT............................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................AAGTTTCACAACATCACCA................................. 19 2 2 0.50 1 0 0 1 0 0 0
....................................................ACGTATACTGAATGTATAC............................................................................................. 19 1 2 0.50 1 0 0 1 0 0 0
..................................................TCACGTATACTGAAGGTAT............................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0
..................................................TTACGTATACTGAATGTATAA............................................................................................. 21 2 2 0.50 1 0 0 0 1 0 0
...............................................................AGGTATAGCGGTTAGAATAC................................................................................. 20 3 3 0.33 1 0 0 0 0 1 0
..................................................GCACGTATACTGAAGGTAT............................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0
................................................TGTTACGTATACTGAAGGT................................................................................................. 19 0 6 0.17 1 0 1 0 0 0 0
.........................................................................................................................AAAACCACCATCCTTCATAAT...................... 21 3 6 0.17 1 0 0 0 0 0 1
..................................................................................CATTTAGGATACCTTCAGTA.............................................................. 20 3 8 0.13 1 0 0 0 0 1 0
.................................................GTTACGGATGCTGAAGGT................................................................................................. 18 2 12 0.08 1 1 0 0 0 0 0
...............................................................................AAAGACTCAGGATACATT................................................................... 18 2 16 0.06 1 0 0 0 0 1 0

Anti-sense strand reads

TAAAGTCTTATAATTCAAAAGTGCAGGGCGCAACTTCCACAATGGAGCACAATGCATATGACTTCCATATGGCCTATCCTATGTGAGTCCTATGTAAGTCATATGCATATGCTTCAACGTGTTTTAGTGGTAGGAGGCATTACAAGATCACGACGTTAATTTCT

***************************************..((((.((.((((((.((((((((((((.((((.((....((......))..)))))).)))))))))))))))))).)).))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 M058

embryo

 V039

embryo

 V055

head

 V106

head

 V105

male body
.....................................................................................AGTCCTATGTAAGTCATATGCA......................................................... 22 0 1 744.00 744 636 91 14 2 0 1
......................................................................................GTCCTATGTAAGTCATATGCA......................................................... 21 0 1 507.00 507 499 3 3 0 2 0
.....................................................................................AGTCCTATGTAAGTCATATGC.......................................................... 21 0 1 64.00 64 63 1 0 0 0 0
......................................................................................GTCCTATGTAAGTCATATGC.......................................................... 20 0 1 48.00 48 48 0 0 0 0 0
.......................................................................................TCCTATGTAAGTCATATGCA......................................................... 20 0 1 35.00 35 28 5 1 0 1 0
........................................................................................CCTATGTAAGTCATATGCA......................................................... 19 0 1 32.00 32 3 29 0 0 0 0
.....................................................................................AGTCCTATGTAAGGCATATGCA......................................................... 22 1 1 29.00 29 29 0 0 0 0 0
......................................................................................GTCCTATGTAAGGCATATGCA......................................................... 21 1 1 25.00 25 25 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGACATATGCA......................................................... 22 1 1 17.00 17 17 0 0 0 0 0
.................................................CAATGCATATGACTTCCATAT.............................................................................................. 21 0 1 12.00 12 0 12 0 0 0 0
......................................................................................GTCCTATGTAAGACATATGCA......................................................... 21 1 1 10.00 10 10 0 0 0 0 0
................................................TCAATGCATATGACTTCCATAT.............................................................................................. 22 1 1 9.00 9 0 9 0 0 0 0
......................................................................................GTCCTATGTAAGCCATATGCA......................................................... 21 1 1 8.00 8 8 0 0 0 0 0
.....................................................................................TGTCCTATGTAAGTCATATGCA......................................................... 22 1 1 7.00 7 6 0 0 1 0 0
.....................................................................................AGTCCTATGTAAGCCATATGCA......................................................... 22 1 1 6.00 6 6 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGGA......................................................... 22 1 1 5.00 5 0 5 0 0 0 0
................................................CCAATGCATATGACTTCCATAT.............................................................................................. 22 1 1 5.00 5 0 5 0 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATATGCA......................................................... 24 1 1 5.00 5 5 0 0 0 0 0
................................................ACAATGCATATGACTTCCATAT.............................................................................................. 22 0 1 5.00 5 0 4 1 0 0 0
.........................................................................................CTATGTAAGTCATATGCA......................................................... 18 0 1 5.00 5 0 5 0 0 0 0
....................................................................................AAGTCCTATGTAAGTCATATGCA......................................................... 23 1 1 4.00 4 3 1 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATCCA......................................................... 22 1 1 4.00 4 0 4 0 0 0 0
....................................................................................TAGTCCTATGTAAGTCATATGCA......................................................... 23 1 1 4.00 4 4 0 0 0 0 0
......................................................................................GTCCTATGTAAGTCATATG........................................................... 19 0 1 4.00 4 4 0 0 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATATGC.......................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.................................................CAATGCATATGACTTCCATATGGC........................................................................................... 24 0 1 3.00 3 0 3 0 0 0 0
.....................................................................................GGTCCTATGTAAGTCATATGCA......................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.......................................................................................TCCTATGTAAGTCATATGC.......................................................... 19 0 1 3.00 3 3 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATAGGCA......................................................... 22 1 1 3.00 3 0 3 0 0 0 0
......................................................................................GTCCTATTTAAGTCATATGCA......................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...................................................ATGCATATGACTTCCATATGGC........................................................................................... 22 0 1 2.00 2 1 0 1 0 0 0
....................................................................................CAGTCCTATTTAAGTCATATGCA......................................................... 23 2 1 2.00 2 1 0 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCG......................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................................................CGTCCTATGTAAGTCATATGCA......................................................... 22 1 1 2.00 2 1 1 0 0 0 0
.......................................................................................TCCTATGTAAGACATATGCA......................................................... 20 1 1 2.00 2 2 0 0 0 0 0
......................................................................................GTCCTATGTAGGTCATATGCA......................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................................................AGTCCTATGTAAATCATATGC.......................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTAATATGCA......................................................... 22 1 1 2.00 2 0 2 0 0 0 0
.....................................................................................AGTCCTATCTACGTCATATGCA......................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.................................................CAATGCATATGACTTCCATATGGCTA......................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATGC.......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
................................................TCAATGCATATGACTTCCATGT.............................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATGC.......................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................CCCTATGTAAGTCATATGCAAA....................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTCCTATTTAAGTCATATGCA......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................GGTCCTATGTAAGGCATATGCA......................................................... 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................GTCCTATGGAAGGCATATGCA......................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGTTCTATGTAAGTCATATGCA......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTCCTATGGAAGGCATATGCA......................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...................................................................................GGAGTCCTATGTAAGTCATATGCA......................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........................................................................................CCTATGTAAGTCATATGC.......................................................... 18 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTCCTAAGTAAGTCATATGCA......................................................... 22 1 1 1.00 1 0 0 0 1 0 0
......................................................................................GTCCTATGTAAGTCATATGCAG........................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATGTAAGTCATATGCATT....................................................... 19 1 2 1.00 2 0 0 0 0 0 2
......................................................................................GTCCTATGTAAGTCATATGCAC........................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATG........................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATAT............................................................ 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................CCCTATGTAAGTCATATGCA......................................................... 20 1 1 1.00 1 0 1 0 0 0 0
........................................................................................CCTATGTAAGTCATACGCA......................................................... 19 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTCTTATGTAAGTCATATGCA......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................ATCCTATGTAAGTCATATGCA......................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................................TGAGTCCTATGTAAGTCATATGC.......................................................... 23 0 1 1.00 1 1 0 0 0 0 0
......................................................................................GTCCCATGTAAGACATATGCA......................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................AAAAGACCACGACGTTAATT... 20 2 1 1.00 1 0 1 0 0 0 0
....................................................................................GAGTCCTATGTAAGTCATATGC.......................................................... 22 0 1 1.00 1 0 1 0 0 0 0
........................................................................................CCTATGTAAGTCATATGGA......................................................... 19 1 1 1.00 1 0 1 0 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATGCA......................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...................................................................................TGAGTCCTATGTAAGTCATATGCA......................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTCCGATGTAAGTCATATGCA......................................................... 22 2 1 1.00 1 0 1 0 0 0 0
......................................................................................GCCCTATGTAAGTCATATGCA......................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATA............................................................. 18 0 1 1.00 1 1 0 0 0 0 0
....................................................................................GAGTCCTATGTAAGTCATATGCA......................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGTCCTATGTAAATCATATGCA......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TAGTCCTATGTAAGTCATATGC.......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TAGTCCTATGTAAGGCATATGCA......................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................TCCTATGTAAGGCATATGCA......................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................TGCATATGACTTCCATATGGC........................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
........................................................................................CCTATGTAAGTCATATGCAC........................................................ 20 1 1 1.00 1 0 1 0 0 0 0
...................................................................................TTAGTCCTATGTAAGTCATATG........................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATTC.......................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.................................................CAATGCATACGACTTCCACAT.............................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
........................................................................................CCTATGTAAGTCATAGGCA......................................................... 19 1 1 1.00 1 0 1 0 0 0 0
................................................TCAATGCATATGACTTCCATATGGC........................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTCCTATGTGAGTCATATGCA......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................CAATGCATATGACTTCCATAA.............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
......................................................................................GTCCTACGTAAGTCATATGCA......................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................................GTCCTATGTACGTCATATGCA......................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCACTAG..................................................... 26 3 1 1.00 1 0 1 0 0 0 0
........................................................................................CCTATGTAAGTCATATGCAAA....................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................CGTCCTATGTAAGTCATATGGA......................................................... 22 2 1 1.00 1 0 1 0 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATATGC.......................................................... 23 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................ATTCCTATGTAAGTCATATGCA......................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATTCA......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATG........................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...................................................................................GTAGTCCTATGTAAGTCATATG........................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................TCCTATATAAGTCATATGCA......................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGTA......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................AAGTCCTATGTAAGTCATATGC.......................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATGCA......................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...................................................................................ACAGTCCTATGTAAGTCATATGCA......................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................TCCCATGTAAGGCATATGCA......................................................... 20 2 2 0.50 1 1 0 0 0 0 0
........................................................................................CATATGTAAGTCATATGCA......................................................... 19 1 2 0.50 1 0 1 0 0 0 0
........................................................................................CCTATGTAAGTCATTTGCA......................................................... 19 1 2 0.50 1 0 1 0 0 0 0
......................................................................................GTCCTATGTAACTCATATGC.......................................................... 20 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................AGTCCTATGTAATTCATATGC.......................................................... 21 1 2 0.50 1 1 0 0 0 0 0
......................................................................................CACCTATGCAAGTCATATGCA......................................................... 21 3 3 0.33 1 0 0 1 0 0 0
...............................................................................................................................AGGTATGAGGCAATACAAGAT................ 21 3 3 0.33 1 0 0 0 1 0 0
...................................................................................AAAGTCCTATGTAAGTCATAT............................................................ 21 2 3 0.33 1 1 0 0 0 0 0
................................................................................AGGTGAGTCGTATGTAAATC................................................................ 20 3 8 0.13 1 0 0 0 0 0 1
.....................................................................................................................AGTGTATTAGTGGTAGGAAG........................... 20 3 10 0.10 1 0 0 0 1 0 0
.....................................................................................................................TGTCTATTAGTGGTAGGAGG........................... 20 3 10 0.10 1 0 0 0 1 0 0
...................................................................................TGAATCGTATGTAAGTCA............................................................... 18 2 13 0.08 1 0 0 0 1 0 0
...............CCAAAGTGCAGGGCGGGA................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13340:7215158-7215321 + dan_56 confident ATTTCAGAATAT------TAAGT-TTT--CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT---CCTC---CGTAATGTT------------------C---------------------------TAGTGC------------TGC---AA---TTAA--------------------------------AGA----------
droBip1 scf7180000396708:1638819-1638994 - ATTT------CTA-AAACAAAGT-TTT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT---CCAT---CGTAATTTT------------------CTG-----GTA-----------AGATAGTAGTGC------------TGC---AA---TTAA--------------------------------AGA--------TA
droKik1 scf7180000302313:151123-151297 - TTTT------T---T---CAAGTGTTT--CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCAT---CATC---CGCAAGTGC-------------------TTA----TAAAGGACACGAAAAAGG------AC------------TGC---AG---TTGC--------------------------------AGA----------
droFic1 scf7180000452523:122301-122481 - G-------------A---AAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTAT-GAAATCCGGCGAAAGTGAC------------------TGA----A-A-------------GACGTGTCGCTGCAGTTCGTGATGC---AG---ATTGA--------------------------------GA----------
droEle1 scf7180000486474:1729406-1729565 - ATTT------TTA-AAGTAAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CGAAAGTGA-------------------CG------------------------------------------ATGC---AG---TTGC--------------------------------AGA----------
droRho1 scf7180000759657:23944-24116 - TTTTAACAG--------TAAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CGAAAGTGC-------------------CAA----A-C-----------AGGATGCGTCGC------------TGC---AG---TTGC--------------------------------AGA----------
droBia1 scf7180000299102:622695-622897 - AAT---------------AAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CAAAAGTGC-------------------CGA----G-A-----------AAGATGCGCCGCTGCAGATCCAGATCC---AG---ATGAA-GATGAGGCCAA---------T-------AGAGTGTGAATTTTA
droTak1 scf7180000411269:86518-86704 - TTTT------AAA-AAGAAAAGTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CAAAAGTGC-------------------CAA----AGA-----------AGGATGCGCCGCTGCAGTTCCAGGTGC---AG---ATAAA--------------------------------GA----------
droEug1 scf7180000409804:92835-93030 - TTAA-----------AGTAAACTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTAT---AATC---CGAAAGTGA-------------------CCA----A-A-----------ATGAAGT------GCAGTTCCAGATGC---AG---CCAAGCGATGA-----AATCCAGATTT-------AAAGA----------
dm3 chr3R:12681900-12682105 - dme-mir-iab-8 Known_mirbase GTCT--------TAA---AAAGTGTTT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT---TATT---CAAAAGTGC-------------------TGA----A-A-----------ATTATGCGTCGTCGCGGATCCAAATGC---AG---ATAAA-GATGAAACCATATCCAGATGT-------AAAGA----------
droSim2 3r:8574073-8574255 + dsi-mir-iab-8 Known_mirbase GTGT------ATT-A---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT---TATC---CAAAAGTGC-------------------TGA----A-A-----------ATTATGCCGTGTCGCGGATCTAGATGC---AG---ATAAA--------------------------------GA----------
droSec2 scaffold_12:1472204-1472385 + dse_312 confident GTAT--------TAA---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT---TATC---CAAAAGTGC-------------------TGA----A-A-----------ATTATGCCGTGTCGCGGATCTAGATGC---AG---ATAAA--------------------------------GA----------
droYak3 3R:11708919-11709108 + dya_90 confident ATTAAGCAGTATTAA---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT---AGTC---CAAAAGTGC-------------------TGA----A-A-----------ATTACGCGTCGTCGCGGATCGAGATGT---GG---ATAAA--------------------------------GA----------
droEre2 scaffold_4770:8952368-8952581 + der_113 confident ATTGTAGAGTCTTAA---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT---AATC---CAAAAGTGC-------------------TGA----A-A-----------ATTATACGTCGTCGCGGATCCAGATGC---AG---ATAAA-GATGAGACCAAATCCAGATGT-------GAAGA----------
dp5 2:17671699-17671869 - dps-mir-iab-8 Known_mirbase TTCA-------------------GTTCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCC------TA---CATAACCGC-------------------TGAAAGAA-A-----------ATTACG----------------AGTGC---AG---TCGAAAG---------------GATCC-------GCAGA----------
droPer2 scaffold_0:11526505-11526682 - dpe_160 candidate-rescued GTTT---------AA---ATTCAGTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCC------TA---CATAACCGC-------------------TGAAAGAA-A-----------ATTACG----------------AATGC---AG---TCGAAAG---------------GATCC-------GCAGA----------
droWil2 scf2_1100000004943:4905552-4905739 + dwi_203 confident ACAAAAGAA---TAA---AAAGTGTTTCACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT-----------GGAAAGTGACC--------GGTACCCGGTGACCG----------------TTTCG----------------TATGT---AT---TCGTCGT---------------GGT-C-------GTTGT----------
droVir3 scaffold_12855:414675-414842 + dvi-mir-iab-8 Known_mirbase ATA---------------------TCA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACAA---T---------AAGTG-----------------------------------------------CTCCGCTA------TAAACACCTCAGTTTTCATCGC---------------A---CGCTCTTCAAAAC----------
droMoj3 scaffold_6540:1943708-1943853 - dmo_140 confident GGTT------ATT-----GAAGT-TTTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGCTCCT-GAAAAGTG-----------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:12815063-12815211 - dgr_28 candidate-rescued -----------------------------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTC----------TA---CAAGAGTGTCCTTTGGAGT-GTC----C---------------------------CCCCGGTG------TAAACAC---A-----------------------------------------G-----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ATTTCAGAATAT------TAAGT-TTT--CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT---CCTC---CGTAATGTT------------------C---------------------------TAGTGC------------TGC---AA---TTAA--------------------------------AGA----------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191232.0023244001015325
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................22189.008929442536
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................24147.00473330308
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................20145.00452540088
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................21129.00292070020
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................24119.00193000124
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................21118.00183001113
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................25111.0011300134
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23110.0010600031
....................................................................................................TACATTCAGTATACGTATACGT..................................................................................................................................................................2216.006000060
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1814.004400000
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2114.004310000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2014.004110020
.................................................................................................GGATACATTCAGTATACGTATA.....................................................................................................................................................................2214.004130000
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................2013.003000030
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2512.002200000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2212.002200000
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1912.002200000
...........................................................TTACGTATACTGAAGGTATACCA..........................................................................................................................................................................................................2311.001100000
................................................................................................AGGATACATTCAGTATACGTAT......................................................................................................................................................................2211.001100000
.................................................................................................GGATACATTCAGTATACGTAT......................................................................................................................................................................2111.001010000
...........................................................TTACGTATACTGAAGGTATACCGTTG.......................................................................................................................................................................................................2611.001000010
.............................................................ACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2011.001100000
...........................................................TTACGTATACTGAAGGTATACCGGTGT......................................................................................................................................................................................................2711.001000010
............................................................TACGTATACTGAAGGTATACCGTT........................................................................................................................................................................................................2411.001100000
.........................................................TGTTACGTATACTGAAGGTAG..............................................................................................................................................................................................................2111.001000010
.........................................................TGTTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2211.001100000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2111.001100000
..........................................................................................ACACTCAGGATACATTCAG...............................................................................................................................................................................1911.001010000
...........................................................TTACGTATACTGAAGGTATACCGC.........................................................................................................................................................................................................2411.001000010
..............................................................CGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2111.001100000
.........................................................TGTTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2411.001010000
...........................................................TTACGTATACTGAAGGTAC..............................................................................................................................................................................................................1911.001000010
...........................................................TTACGTATACTGAAGGTACT.............................................................................................................................................................................................................2011.001100000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2011.001100000
.........................................................TGTTACGTATACTGAAGGTATG.............................................................................................................................................................................................................2211.001100000
.........................................................TGTTACGTATACTGAAGGT................................................................................................................................................................................................................1960.171100000
droBip1
ATTT------CTA-AAACAAAGT-TTT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT---CCAT---CGTAATTTT------------------CTG-----GTA-----------AGATAGTAGTGC------------TGC---AA---TTAA--------------------------------AGA--------TASizeHit CountTotal NormTotal
No Reads
droKik1
TTTT------T---T---CAAGTGTTT--CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCAT---CATC---CGCAAGTGC-------------------TTA----TAAAGGACACGAAAAAGG------AC------------TGC---AG---TTGC--------------------------------AGA----------SizeHit CountTotal NormTotal
No Reads
droFic1
G-------------A---AAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTAT-GAAATCCGGCGAAAGTGAC------------------TGA----A-A-------------GACGTGTCGCTGCAGTTCGTGATGC---AG---ATTGA--------------------------------GA----------SizeHit CountTotal NormTotal
No Reads
droEle1
ATTT------TTA-AAGTAAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CGAAAGTGA-------------------CG------------------------------------------ATGC---AG---TTGC--------------------------------AGA----------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTTAACAG--------TAAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CGAAAGTGC-------------------CAA----A-C-----------AGGATGCGTCGC------------TGC---AG---TTGC--------------------------------AGA----------SizeHit CountTotal NormTotal
No Reads
droBia1
AAT---------------AAAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CAAAAGTGC-------------------CGA----G-A-----------AAGATGCGCCGCTGCAGATCCAGATCC---AG---ATGAA-GATGAGGCCAA---------T-------AGAGTGTGAATTTTASizeHit CountTotal NormTotal
No Reads
droTak1
TTTT------AAA-AAGAAAAGTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT---AATC---CAAAAGTGC-------------------CAA----AGA-----------AGGATGCGCCGCTGCAGTTCCAGGTGC---AG---ATAAA--------------------------------GA----------SizeHit CountTotal NormTotal
No Reads
droEug1
TTAA-----------AGTAAACTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTAT---AATC---CGAAAGTGA-------------------CCA----A-A-----------ATGAAGT------GCAGTTCCAGATGC---AG---CCAAGCGATGA-----AATCCAGATTT-------AAAGA----------SizeHit CountTotal NormTotal
No Reads
dm3
GTCT--------TAA---AAAGTGTTT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT---TATT---CAAAAGTGC-------------------TGA----A-A-----------ATTATGCGTCGTCGCGGATCCAAATGC---AG---ATAAA-GATGAAACCATATCCAGATGT-------AAAGA----------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................1916832.006832000000000000000000000138000000000001201210401403114301000000000000000000000000000000000000000000011000101000000000001001000000000010000000000001002072288010400000000000020000330001010000002125146890009001395000000300000000010207910213101714140000000083020000112260005300000000000200000000086334859682037011016003233332100510265205030402900206245003295501197303022090051718382124233217221000010
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221923.00923000000000100000000000004000000000000000000103000003000000000000000000000000000000001000000000101200006000000101000401000000000010000100000010000000011400000000000000012010024549030250000071007000013090000000000000000055462049146001600000000027250300001543200240000000000000000000000515140400102200001172000140110520010000033000011002081322000000
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201564.0056400000000000000000000000000000000000000000000301000000000100000000000000000000000000000000100000030002010000000000000000000000000000000000000000000001800000000000000000010005020000000000040300001105000000000000000002225004302128000042001102000098500035000001000000000000000020002020161000000040005010040450001000053000030001603751377000000
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211486.004860000000000100000000000020000000000001110002030000020000000000000000000000000000000000000000000013001400000002000000000000000010010000000000001000000030000000000000002501002241301091000004142100002050000000000000000043130083610011000091007504000092320020000000000000000000000011404030082000100022001011110050000100010000013003022010000000
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................231194.0019400000000100010000000000200000000000000000000000000000000010000000000000000000000000030000060210215200621001023222107000000000000000000000000000000000020000000000000000102000100000000000002103000017028000000000000000000001000100000000000022000000132001000000000000000000000000001100190000000110000000001100000000900004000020100000000
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................241167.001670000000000000000000000000000000000000000000010000000000001100000000000000000000000050000001000001000000000000000000000000000000010100000000000000000000000000000000000100001310010220000033212000016012000000000000000003411004200006000000001300000080002000000000000000000000000100000070000001300000100000000000000600006000000000000000
.................................................................................................GGATACATTCAGTATACGTTTA.....................................................................................................................................................................221165.001650000000020000000000000000000000000000000000000000000000045000000000000000000000003402135100206003008102701000000007201100000000000000000000000000000000000000000000000000000000031100000000000000000020000000000000000000000000000000000000000000000020000000000000000000000000000000000020000001100000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................241155.001550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000001401000080800000000000001000111000000000000000000100000002000000000000000000000000000000000031100000052000110020110000000041000023000040110000000
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................21199.0099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001100000000000000000000000000000000000401000020200000000000000000002000010000000000001000000040002000000000000000000000000100000015000000092000000030320000000017000020001020020000000
...........................................................TTACGTATACTGAAGGTATACCGGATC......................................................................................................................................................................................................27160.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................25156.00560000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000010000000000000000000000000000000000000000000001000000010000000000000000001000000000000000001900000030600000000000000000110000030000000000001200000071000000000000000000000000000000000030000000010000000000000000000100001000000000000000
........................................TTGTTAGTGCTCTCTCGTG.................................................................................................................................................................................................................................19150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000001700000094000000000000000000011800002000010000000000
................................................................................................AGGATACATTCAGTATACGTTT......................................................................................................................................................................22149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000310000100000001100600000000000000000000000000000000001000000000000000010000000000000000000500000040000000000000000000001000000000000000000200000060001000000000000000000000000011000050000000010000000100000000000300001000000001000000
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................25142.0042000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000701000020200000000000000000112000130000000000002200000051000000000000000000000000000000000030000001000000000001000000000300001000000000000000
................................................................................................AGGATACATTCAGTATACGTTTA.....................................................................................................................................................................23138.0038000000001000000000000000000000000000000000000000000000000000000000000000000000000305400000000000100050000000000000000000000000000000000000000100000000000000000000000000100001000000000000100000000100000000000000000011000000000000000000000000050000000000000000000000000000000000030000001000001000000000000000100001000000000000000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................21124.0024000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000303000020000000000000000000001000010000000000000000000001001000000000000000000000010000000040000000000000000100000000000100001001000000000000
..................................................................................................GATACATTCAGTATACGTTTAA....................................................................................................................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000120000000100000000000000000000200000000000000000000
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................18118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000010000000000000000000000000000000000080000000201000000000000000000000000001020000000000
...........................................................TTACGTATACTGAAGGTATACCATC........................................................................................................................................................................................................25117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTTGTTAGTGCTCTCTCGTG.................................................................................................................................................................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000300000000000000000000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................18113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010001000000000000000000000000100000040000000000010000000100000000100000001010000000000
...........................................................TTACGTATACTGAAGGTAG..............................................................................................................................................................................................................19112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000020001000000020000100400000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACATC.........................................................................................................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATAATC..........................................................................................................................................................................................................23111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GGATACATTCAGTATACGTTT......................................................................................................................................................................21111.0011000000100000000000000000000000000000000000000000000000000000000000000000000000000200400000000000000000000000000100000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000100001100000000200000000000000000000
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................22110.0010000000000000000000000000000000000000000000101000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000001000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000010000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTAC..............................................................................................................................................................................................................1918.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000010000000000010000101100001000000000000000000000000
................................................................................................AGGATACATTCAGTATACGTT.......................................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000001000000000000000000000000200000000000000000000
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1917.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000010000101000000000100000001000000000000
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000100000000000000100000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................TACATTCAGTATACGTTTACGT..................................................................................................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000001000000000000000000200000000000000000000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000010000000000000000000000000000000001001000000000000
.................................................................................................GGATACATTCAGTATACGTTTAA....................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000100000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GATACATTCAGTATACGTTTA.....................................................................................................................................................................2116.006000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGTTACGTATACTGAAGGTATA.............................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................TTACGTATACTGAAGGT................................................................................................................................................................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGTTGTTAGTGCTCTCTCGTG.................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000100001000000000000000
..................................................................................................GATACATTCAGTATACGTTTAT....................................................................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000
....................................................................................TAGGATACACTCAGGATACATTCAGT..............................................................................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
.................................................................................................GGATACATTCAGTATACG.........................................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATAT............................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGTTACGTATACTGAAGGTA...............................................................................................................................................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................TTACGTATACTGAAGGTT...............................................................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000001000000
....................................................................................................TACATTCAGTATACGTTTA.....................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGAA.......................................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................ATACTGAAGGTATACCGG.........................................................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GATACATTCAGTATACGTTTCA....................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................ACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................ATAGGATACACTCAGGATACAT...................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATC.............................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACGTTGTTAGTGCTCTCTCGTG.................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................GATAGGATACACTCAGGATACATTCAGT..............................................................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................TACATTCAGTATACGTTTACGA..................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................CGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CATTCAGTATACGTTTAA....................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGATAA.....................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCGGAATC.....................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATATT...........................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................GTTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ATACATTCAGTATACGTTT......................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................AGTGCTCTCTCGTGTTACGTA..........................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGATC.......................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GATAGGATACACTCAGGATACATTC.................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTGT------ATT-A---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT---TATC---CAAAAGTGC-------------------TGA----A-A-----------ATTATGCCGTGTCGCGGATCTAGATGC---AG---ATAAA--------------------------------GA----------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................................................GGATACATTCAGTATACGTTTACG...................................................................................................................................................................241196.001960000194200000000000
................................................................................................AGGATACATTCAGTATACGTTTACG...................................................................................................................................................................251142.001420000142000000000000
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................241123.001230001026110223933018000
................................................................................................AGGATACATTCAGTATACGTTT......................................................................................................................................................................221109.001090001107100000000000
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................181106.00106000099601000000000
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191105.001051241361035112300000
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201104.00104022884200000501000
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................22174.00740752440004202701000
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................21148.0048040305010011600000
................................................................................................AGGATACATTCAGTATAC..........................................................................................................................................................................18138.0038000038000000000000
................................................................................................AGGATACATTCAGTATACG.........................................................................................................................................................................19134.0034000033100000000000
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23134.00340021140000010016000
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................25127.002702516000251401000
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................20120.0020000020000000000000
.................................................................................................GGATACATTCAGTATACGTTT......................................................................................................................................................................21119.0019000018100000000000
.................................................................................................GGATACATTCAGTATACG.........................................................................................................................................................................18115.0015000015000000000000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................25114.001401000020221006000
.................................................................................................GGATACATTCAGTATACGT........................................................................................................................................................................19111.0011000011000000000000
.................................................................................................GGATACATTCAGTATACGTT.......................................................................................................................................................................20111.0011000011000000000000
................................................................................................AGGATACATTCAGTATACGTT.......................................................................................................................................................................2119.00900009000000000000
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2318.00800014000011001000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1818.00800016100000000000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2217.00700024000000001000
.................................................................................................GGATACATTCAGTATACGTTTA.....................................................................................................................................................................2217.00700005000000200000
........................................TTGCTCGTGCTATCTCGTG.................................................................................................................................................................................................................................1916.00600300000001200000
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2415.00501002001010000000
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2414.00400010000002001000
.................................................................................................GGATACATTCAGTATACGTTTAC....................................................................................................................................................................2314.00400004000000000000
..................................................................................................GATACATTCAGTATACGTTTAA....................................................................................................................................................................2213.00300010000020000000
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2113.00300030000000000000
...................................................................................ATAGGATACACTCAGGATACAT...................................................................................................................................................................................2212.00200000000000002000
...........................................................TTACGTATACTGAAGGTATACCGGG........................................................................................................................................................................................................2512.00200200000000000000
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1912.00200002000000000000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2012.00200002000000000000
.......................................GTTGCTCGTGCTATCTCGTG.................................................................................................................................................................................................................................2012.00200200000000000000
...........................................................TTACGTATACTGAAGGTATACCGGAT.......................................................................................................................................................................................................2612.00201001000000000000
..................................................................................................GATACATTCAGTATACGT........................................................................................................................................................................1811.00100001000000000000
...........................................................TTACGTATACTGAAGGTAC..............................................................................................................................................................................................................1911.00101000000000000000
...........................................................TTACGTATACTGAAGGT................................................................................................................................................................................................................1711.00100000010000000000
...........................................................TTACGTATACTGAAGGTATACCGTT........................................................................................................................................................................................................2511.00100000000000001000
...........................................................TTACGTATACTGAAGGTATACT...........................................................................................................................................................................................................2211.00100000000000100000
............................................................TACGTATACTGAAGGTATACCGGAT.......................................................................................................................................................................................................2511.00100001000000000000
...........................................................TTACGTATACTGAAGGTATACCA..........................................................................................................................................................................................................2311.00100100000000000000
......................................CGTTGCTCGTGCTATCTCGTG.................................................................................................................................................................................................................................2111.00100000000100000000
...........................................................TTACGTATACTGAAGGTATACCGGC........................................................................................................................................................................................................2511.00100000000010000000
.................................................................ATACTGAAGGTATACCGG.........................................................................................................................................................................................................1811.00100000000001000000
................................................................................................AGGATACATTCAGTATACGTTTAC....................................................................................................................................................................2411.00100001000000000000
....................................................................................TAGGATACACTCAGGATACATTCAGT..............................................................................................................................................................................2611.00100000000000100000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2111.00100000000001000000
................................................................................................AGGATACATTCAGTATACGTTTA.....................................................................................................................................................................2311.00100000000000100000
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1911.00100000000000001000
..................................................................................................GATACATTCAGTATACGTTTA.....................................................................................................................................................................2111.00100001000000000000
..................................................................................GATAGGATACACTCAGGATACATTCA................................................................................................................................................................................2611.00101000000000000000
.............................................................ACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2111.00100000000000001000
...................................................................................................ATACATTCAGTATACGTTTAT....................................................................................................................................................................2111.00100000000100000000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2011.00101000000000000000
..........................................................GTTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2611.00100100000000000000
......................................................................................................CATTCAGTATACGTTTACG...................................................................................................................................................................1911.00100001000000000000
droSec2
GTAT--------TAA---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT---TATC---CAAAAGTGC-------------------TGA----A-A-----------ATTATGCCGTGTCGCGGATCTAGATGC---AG---ATAAA--------------------------------GA----------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191185.0018551941327
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221130.001307916341
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................20170.00703421105
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................24156.0056381170
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................21147.0047311033
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23127.0027122130
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................25117.00176290
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................18115.001500132
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................24110.00101720
................................................................................................AGGATACATTCAGTATACGTTTA.....................................................................................................................................................................2319.0093330
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2519.0092232
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2018.0088000
................................................................................................AGGATACATTCAGTATACGTTT......................................................................................................................................................................2217.0073121
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1815.0055000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2115.0051400
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2114.0040220
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2114.0044000
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2314.0044000
.................................................................................................GGATACATTCAGTATACGTTTA.....................................................................................................................................................................2213.0031110
........................................TTGCTCGTGCTATCTCGTG.................................................................................................................................................................................................................................1913.0030030
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2413.0032010
.................................................................ATACTGAAGGTATACCGG.........................................................................................................................................................................................................1812.0020020
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1912.0022000
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2212.0021001
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2012.0020200
...........................................................TTACGTATACTGAAGGTATACCCC.........................................................................................................................................................................................................2411.0011000
.................................................................................................GGATACATTCAGTATACGTTT......................................................................................................................................................................2111.0011000
......................................................................................................CATTCAGTATACGTTTAA....................................................................................................................................................................1811.0010010
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2211.0011000
.......................................GTTGCTCGTGCTATCTCGTG.................................................................................................................................................................................................................................2011.0010010
...........................................................TTACGTATACTGAAGGTATACT...........................................................................................................................................................................................................2211.0010010
...........................................................TTACGTATACTGAAGGTATACCGTT........................................................................................................................................................................................................2511.0010100
..............................................................CGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2211.0010010
...........................................................TTACGTATACTGAAGGTATACCGGATA......................................................................................................................................................................................................2711.0010010
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1911.0010100
............................................................TACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2411.0010100
droYak3
ATTAAGCAGTATTAA---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT---AGTC---CAAAAGTGC-------------------TGA----A-A-----------ATTACGCGTCGTCGCGGATCGAGATGT---GG---ATAAA--------------------------------GA----------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221529.00529010641731020000
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211270.00270014112160020000
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191131.001310680145530000
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................20191.009105021140060000
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................24186.00860423950000000
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23123.0023016411010000
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................21116.0016015100000000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2018.00808000000000
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2417.00701100050000
................................................................................................AGGATACATTCAGTATACGTTTA.....................................................................................................................................................................2316.00600420000000
................................................................................................AGGATACATTCAGTATACGTTT......................................................................................................................................................................2215.00502300000000
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2315.00505000000000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1814.00404000000000
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2514.00400220000000
.........................................................TGTTACGTATACTGAAGGTATA.............................................................................................................................................................................................................2213.00300300000000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2513.00300200010000
.................................................................................................GGATACATTCAGTATACGTTTA.....................................................................................................................................................................2213.00300300000000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2112.00202000000000
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................1812.00201100000000
...........................................................TTACGTATACTGAAGGTATACCGGC........................................................................................................................................................................................................2512.00200110000000
.................................................................................................GGATACATTCAGTATACGTTT......................................................................................................................................................................2112.00200200000000
................................................................................................AGGATACATTCAGTATACGTT.......................................................................................................................................................................2112.00200200000000
.................................................................................................GGATACATTCAGTATACGTTC......................................................................................................................................................................2112.00200200000000
........................................TTGCTCGTGCTTTCTCGTG.................................................................................................................................................................................................................................1911.00100100000000
.............................................................ACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2011.00101000000000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2211.00101000000000
.............................................................ACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2211.00101000000000
...........................................................TTACGTATACTGAAGGTATACCGGG........................................................................................................................................................................................................2511.00101000000000
...............................................................GTATACTGAAGGTATACCG..........................................................................................................................................................................................................1911.00101000000000
.............................................................ACGTATACTGAAGGTATAC............................................................................................................................................................................................................1911.00101000000000
...................................................................................................ATACATTCAGTATACGTTTACC...................................................................................................................................................................2211.00100100000000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2011.00100000010000
.............................................................ACGTATACTGAAGGTATACCGGC........................................................................................................................................................................................................2311.00100100000000
................................................................................................AGGATACATTCAGTATACGTTC......................................................................................................................................................................2211.00100100000000
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2411.00101000000000
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1911.00101000000000
..........................................................GTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2011.00100000010000
..........................................................GTTACGTATACTGAAGGTATAC............................................................................................................................................................................................................2211.00100100000000
......................................CGTTGCTCGTGCTTTCTCGTG.................................................................................................................................................................................................................................2111.00100000010000
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1911.00101000000000
...........................................................TTACGTATACTGAAGGTATACCGA.........................................................................................................................................................................................................2411.00101000000000
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2211.00100100000000
..............................................................CGTATACTGAAGGTATACC...........................................................................................................................................................................................................1911.00101000000000
..................................................................................................GATACATTCAGTATACGTTTAAC...................................................................................................................................................................2311.00100100000000
..................................................................................................GATACATTCAGTATACGTTTAT....................................................................................................................................................................2211.00101000000000
droEre2
ATTGTAGAGTCTTAA---AAAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT---AATC---CAAAAGTGC-------------------TGA----A-A-----------ATTATACGTCGTCGCGGATCCAGATGC---AG---ATAAA-GATGAGACCAAATCCAGATGT-------GAAGA----------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191533.0053369044375810
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221264.0026415577198140
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211143.00143962623880
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201105.0010555701712140
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................24199.009983501604
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23134.003428210300
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................24117.001761001000
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................21113.001312100000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................20113.001312000100
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................1819.0091000080
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2318.0088000000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2517.0073000400
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2517.0073101200
........................................TTGCTCGTGCTTTCTCGTG.................................................................................................................................................................................................................................1916.0060100320
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2215.0055000000
................................................................................................AGGATACATTCAGTATACGTTT......................................................................................................................................................................2215.0051011200
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1913.0033000000
.....................................ACGTTGCTCGTGCTTTCTCGTG.................................................................................................................................................................................................................................2212.0020000020
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2112.0020000200
................................................................................................AGGATACATTCAGTATACGTTTA.....................................................................................................................................................................2312.0021001000
...........................................................TTACGTATACTGAAGGTATACCCT.........................................................................................................................................................................................................2412.0021001000
.................................................................................................GGATACATTCAGTATACGTTTA.....................................................................................................................................................................2212.0021100000
...........................................................TTACGTATACTGAAGGTATACCGA.........................................................................................................................................................................................................2412.0022000000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1812.0022000000
..........................................................GTTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2311.0011000000
....................................................................................TAGGATACACTCAGGATACATTCA................................................................................................................................................................................2411.0010000010
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2411.0011000000
..........................................................GTTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2511.0011000000
..............................................................CGTATACTGAAGGTATAC............................................................................................................................................................................................................1811.0011000000
.................................................................................................GGATACATTCAGTATACGTT.......................................................................................................................................................................2011.0011000000
................................................................................................AGGATACATTCAGTATACGTTTAA....................................................................................................................................................................2411.0011000000
............................................................TACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2411.0011000000
...........................................................TTACGTATACTGAAGGTATC.............................................................................................................................................................................................................2011.0010000100
..........................................................GTTACGTATACTGAAGGTATA.............................................................................................................................................................................................................2111.0011000000
........................................TTGCTCGTGCTTTCTCGTGT................................................................................................................................................................................................................................2011.0011000000
.......................................GTTGCTCGTGCTTTCTCGTG.................................................................................................................................................................................................................................2011.0010000100
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1911.0010000100
.................................................................................................GGATACATTCAGTATACGTTT......................................................................................................................................................................2111.0011000000
...........................................................TTACGTATACTGAAGGTATACCGGAA.......................................................................................................................................................................................................2611.0011000000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2011.0010000100
...........................................................TTACGTATACTGAAGGTATACCGC.........................................................................................................................................................................................................2411.0010100000
dp5
TTCA-------------------GTTCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCC------TA---CATAACCGC-------------------TGAAAGAA-A-----------ATTACG----------------AGTGC---AG---TCGAAAG---------------GATCC-------GCAGA----------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211736.007360611562815690110
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191390.0039012410153799060
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201370.00370029961037311040
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221326.003260105157351552070
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................241183.001830484031001243
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................20132.003203110000000
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................19130.003003000000000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................18128.002802800000000
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23120.002001210100060
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................25115.00150700112040
................................................................................................AGGATACATTCAGTATACGTATA.....................................................................................................................................................................23111.00110080200010
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................21111.001101100000000
.................................................................................................GGATACATTCAGTATACGTATA.....................................................................................................................................................................2216.0060060000000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2516.0060200002020
..............................................................CGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2215.0050200300000
................................................................................................AGGATACATTCAGTATACGTA.......................................................................................................................................................................2114.0040130000000
................................................................................................AGGATACATTCAGTATACGTAT......................................................................................................................................................................2214.0040310000000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2014.0040000004000
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2214.0040210000010
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2314.0040400000000
.............................................................ACGTATACTGAAGGTATAC............................................................................................................................................................................................................1913.0030300000000
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................2013.0030000002010
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2412.0020000001010
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2112.0020200000000
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................1812.0020100100000
....................................................................................................TACATTCAGTATACGTATACGT..................................................................................................................................................................2211.0010000001000
..................................................................................................GATACATTCAGTATACGTATAC....................................................................................................................................................................2211.0010010000000
.............................................................ACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2211.0010100000000
....................................................................................................TACATTCAGTATACGTATA.....................................................................................................................................................................1911.0010100000000
...........................................................TTACGTATACTGAAGGTTA..............................................................................................................................................................................................................1911.0010000001000
...A-------------------GTTCGACGTATCCCGCGTTGCT...............................................................................................................................................................................................................................................2311.0010000100000
...........................................................TTACGTATACTGAAGGTATTA............................................................................................................................................................................................................2111.0010000100000
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2111.0010000001000
...........................................................TTACGTATACTGAAGGTATACT...........................................................................................................................................................................................................2211.0010000000010
...........................................................TTACGTATACTGAAGGTATTT............................................................................................................................................................................................................2111.0010000000010
................................................................................................AGGATACATTCAGTATACGTATAC....................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................GAA-A-----------ATTACG----------------AGTGC---AG---TCGAAAG---------------GA.........................2611.0010010000000
.............................................................ACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2111.0010100000000
..............................................................CGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2111.0010100000000
............................................................TACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2111.0010100000000
droPer2
GTTT---------AA---ATTCAGTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCC------TA---CATAACCGC-------------------TGAAAGAA-A-----------ATTACG----------------AATGC---AG---TCGAAAG---------------GATCC-------GCAGA----------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191543.00543025562505
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................20164.0064015191128
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................21146.00460393004
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................22124.00242192001
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................24111.0011081002
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................20110.0010010009
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2312.002020000
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2412.002000002
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2112.002020000
...........................................................TTACGTATACTGAAGGTTA..............................................................................................................................................................................................................1912.002000002
...........................................................TTACGTATACTGAAGGTATACT...........................................................................................................................................................................................................2211.001000001
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2211.001010000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2011.001010000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2111.001000001
..............................................................CGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2111.001010000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2511.001000001
.................................................................................................GGATACATTCAGTATACGTATA.....................................................................................................................................................................2211.001010000
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................2011.001000001
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1911.001010000
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2411.001010000
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1911.001000001
................................ATCCCGCGTTGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................2711.001100000
...........................................................TTACGTATACTGAAGGTATAT............................................................................................................................................................................................................2111.001001000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1811.001010000
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2311.001010000
droWil2
ACAAAAGAA---TAA---AAAGTGTTTCACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT-----------GGAAAGTGACC--------GGTACCCGGTGACCG----------------TTTCG----------------TATGT---AT---TCGTCGT---------------GGT-C-------GTTGT----------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191236.002361128672317
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211224.0022411771432
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201135.001350776448
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................24187.00870580290
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................22166.00660411222
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23124.0024017070
................................................................................................AGGATACATTCAGTATACGTA.......................................................................................................................................................................21116.0016040102
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................25114.001404190
..............................................................CGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................22113.0013110110
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................18113.0013013000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................20111.0011011000
........................................TTGTTGGTGTTTCATCGTG.................................................................................................................................................................................................................................19110.0010000100
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................2019.00904320
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1919.00909000
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2319.00909000
................................................................................................AGGATACATTCAGTATACGTAT......................................................................................................................................................................2216.00604020
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2514.00401030
................................................................................................AGGATACATTCAGTATACGTATA.....................................................................................................................................................................2313.00301020
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2112.00202000
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2212.00202000
.................................................................................................GGATACATTCAGTATACGTAT......................................................................................................................................................................2112.00202000
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2412.00201010
..........................................................GTTACGTATACTGAAGGTATAC............................................................................................................................................................................................................2212.00202000
......................................CGTTGTTGGTGTTTCATCGTG.................................................................................................................................................................................................................................2112.00200020
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2012.00202000
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2111.00100100
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................1811.00100010
............................................................TACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2411.00101000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2111.00101000
................................ATCCCGCGTTGTTGGTGTTTCATCGTG.................................................................................................................................................................................................................................2711.00100010
.............................................................ACGTATACTGAAGGTATAC............................................................................................................................................................................................................1911.00101000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2211.00101000
...........................................................TTACGTATACTGAAGGTATACG...........................................................................................................................................................................................................2211.00101000
...........................................................TTACGTATACTGAAGGTATACCGGTA.......................................................................................................................................................................................................2611.00101000
...................................................................................................ATACATTCAGTATACGTATACG...................................................................................................................................................................2211.00100010
.............................................................ACGTATACTGAAGGTATA.............................................................................................................................................................................................................1811.00101000
............................................................TACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2111.00101000
................................................................................................AGGATACATTCAGTATACGTC.......................................................................................................................................................................2111.00101000
................................................................................................AGGATACATTCAGTATACGTATAA....................................................................................................................................................................2411.00101000
............................................................................................ACTCAGGATACATTCAGT..............................................................................................................................................................................1811.00100100
............................................................TACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2411.00101000
..................................CCCGCGTTGTTGGTGTTTCATCGTG.................................................................................................................................................................................................................................2511.00100100
droVir3
ATA---------------------TCA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACAA---T---------AAGTG-----------------------------------------------CTCCGCTA------TAAACACCTCAGTTTTCATCGC---------------A---CGCTCTTCAAAAC----------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................1911125.0011251111000121125139100001011106926422125211931900148000011200000000000000000000117800000001000100000
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221694.0069410205540605040000413010328010211206237117040000049000000000000000000010102000000000000000
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................241635.006350023201400000000000000008000001708658242050100024000000000000000000000002000000000000000
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211530.0053000201502010100003102103160002380722485020000032000000000000000000000201000000000000000
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201344.00344006710723801500001101005110000054501862020000011000000000000000000010400000000000000110
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................231306.0030610132090101000001101020150000069401583070000143000000000000000000000100000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................251149.00149000015000000000000001100000031171358070000015000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................211121.00121002009010400000000003000001013316270100010012000000000000000000000100000000000000000
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................20190.009000000110000000000000061000000152151707000006000000000000000000000100000000000000000
................................................................................................AGGATACATTCAGTATACGTA.......................................................................................................................................................................21181.00810001010000000000000000100000162582402000003000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................25168.00680020030000000000001000010000181751301000006000000000000000000000100000000000000000
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................24140.004000100800000000000000000000004315020000014000000000000000000000200000000000000000
................................................................................................AGGATACATTCAGTATACGTAT......................................................................................................................................................................22125.00250000000000000000000000000000782601000000000000000000000100000000000000000000000
................................................................................................AGGATACATTCAGTATACGTATA.....................................................................................................................................................................23123.00230010000000000000000000000000960601000000000000000000000000000000000000000000000
.................................................................................................GGATACATTCAGTATACGTATA.....................................................................................................................................................................22121.00210052000000000000000000000000241401000000000000000000000000010000100000000000000
..............................................................CGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................22116.00160010000100000000000000100000631300000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................20116.001600150000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................21115.001500141000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGATAGGATACACT.............................................................................................................................................................................................36114.00140000000000000000000000000000000000000000010000000003020002600000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTC............................................................................................................................................................................................37113.00130000000000000000000000000000000000000000000000000000220010800000000000000000000
...........................................................TTACGTATACTGAAGGTATACCC..........................................................................................................................................................................................................2318.0080000000000000000000000000000303200000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATAAA...........................................................................................................................................................................................................2218.0080000000000000000000000000000221200001000000000000000000000000000000000000000000
................................................................................................AGGATACATTCAGTATACGTAA......................................................................................................................................................................2218.0080000000000000000000000000000022300000000000000000000000000000100000000000000000
.............................................................ACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2217.0070030000000000000000000000000111100000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................1817.0070000000101000000000020000000010101000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2217.0070020000000000000000000000000100400000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1816.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATAT............................................................................................................................................................................................................2116.0060010000000000010000000000000210100000000000000000000000000000000000000000000000
.................................................................................................GGATACATTCAGTATACGTAT......................................................................................................................................................................2115.0050020000000000000000000000000021000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGTA.......................................................................................................................................................................................................2615.0050000000000000000000000002000020100000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGAA.......................................................................................................................................................................................................2615.0050000000000000000000000000000111200000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTAA..............................................................................................................................................................................................................1914.0040000010000000000000000000000100100000000000000000000000000000100000000000000000
................................................................................................AGGATACATTCAGTATACG.........................................................................................................................................................................1914.0040000000000000000000000000000100200000000000000000000000000001000000000000000000
...........................................................TTACGTATACTGAAGGTAC..............................................................................................................................................................................................................1913.0030000020000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2113.0030000020000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................ACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2313.0030000000000000000000000000000110100000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATC.............................................................................................................................................................................................................2013.0030000000100000000000000000000010000000000000000000000000000000100000000000000000
.........................................CGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................1813.0030000000000000000000000000000020100000000000000000000000000000000000000000000000
.................................................................ATACTGAAGGTATACCGG.........................................................................................................................................................................................................1813.0030000010000000000000000000000010000000001000000000000000000000000000000000000000
..............................................................CGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2112.0020010000000000000000000000000000001000000000000000000000000000000000000000000000
................................ATCCCGCGTCGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................2712.0020000010000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATAAAA..........................................................................................................................................................................................................2312.0020000000000000000000000000000110000000000000000000000000000000000000000000000000
...............................................................................................CAGGATACATTCAGTATACGTA.......................................................................................................................................................................2212.0020000000000000000000000000000101000000000000000000000000000000000000000000000000
..............................................................................................TCAGGATACATTCAGTATACGTATA.....................................................................................................................................................................2512.0020000000000000000000000000000001100000000000000000000000000000000000000000000000
.......................................GTCGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................2012.0020010000000000000000000000000000000000000000000000000000000010000000000000000000
...........................................................TTACGTATACTGAAGGTATACT...........................................................................................................................................................................................................2212.0020000000000000000010000000000000000000001000000000000000000000000000000000000000
..................................CCCGCGTCGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................2512.0020000000000000000000000000000000001000000000000000010000000000000000000000000000
................................................................................................AGGATACATTCAGTATACGTT.......................................................................................................................................................................2112.0020000000000000000000000000000020000000000000000000000000000000000000000000000000
..........................................................GTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1912.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GATACATTCAGTATACGTAT......................................................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GATACATTCAGTATACGTATAA....................................................................................................................................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................................................AGGATACATTCAGTATACGTG.......................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................................................CAGGATACATTCAGTATACGTAT......................................................................................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGCA.......................................................................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................ACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCAA.........................................................................................................................................................................................................2411.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTCT...........................................................................................................................................................................................3811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................GGATACATTCAGTATACGTA.......................................................................................................................................................................2011.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................CGTCGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGG........................................................................................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGATAGGATACA...............................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................TCAGGATACATTCAGTATACGT........................................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTT...............................................................................................................................................................................................................1811.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................GTTACGTATACTGAAGGTATA.............................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGAT.......................................................................................................................................................................................................2611.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGTC.......................................................................................................................................................................................................2611.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTCGCTGGTGTTTCCTCGTA.................................................................................................................................................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATT.............................................................................................................................................................................................................2011.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCT..........................................................................................................................................................................................................2311.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGGAG.......................................................................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................ACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................................................GGATACATTCAGTATACGTATAA....................................................................................................................................................................2311.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................A---T---------AAGTG-----------------------------------------------CTCCGCTA------TAAACA..........................................................2111.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................AGGATACATTCAGTATACGTC.......................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
............................................................TACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................2411.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATACCGTC........................................................................................................................................................................................................2511.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................GGATACATTCAGTATACGTAA......................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................................................GGATACATTCAGTATACGT........................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GATACATTCAGTATACGTATAT....................................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TTACGTATACTGAAGGTATATA...........................................................................................................................................................................................................2211.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
droMoj3
GGTT------ATT-----GAAGT-TTTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGCTCCT-GAAAAGTG-----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................221891.0089121511016559
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................191603.006031600682427
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................211595.005954654001179
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................201147.001471073001522
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................241104.0010466601274
.................................................................................................GGATACATTCAGTATACGTATA.....................................................................................................................................................................22192.00924000880
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................20154.00544900050
...........................................................TTACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................23133.00332510133
................................................................................................AGGATACATTCAGTATACGTATA.....................................................................................................................................................................23123.00231000220
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................24116.00161000510
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................21116.00161500010
................................................................................................AGGATACATTCAGTATACGTA.......................................................................................................................................................................21111.0011020090
...........................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................................................................................................................25110.0010200017
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1918.008800000
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1818.008800000
...........................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2517.007310012
............................................................TACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2315.005500000
............T-----GAAGT-TTTCACACATCCCGC.....................................................................................................................................................................................................................................................2114.004010030
...........................................................TTACGTATACTGAAGGTATAA............................................................................................................................................................................................................2114.004100102
..............................................................CGTATACTGAAGGTATACCGGA........................................................................................................................................................................................................2214.004010030
..................................................................................................GATACATTCAGTATACGTATAC....................................................................................................................................................................2214.004000040
...........................................................TTACGTATACTGAAGGTATACA...........................................................................................................................................................................................................2213.003100020
................................................................................................AGGATACATTCAGTATACGT........................................................................................................................................................................2013.003100002
.................................................................................................GGATACATTCAGTATACGTAT......................................................................................................................................................................2112.002200000
..................................................................................................GATACATTCAGTATACGTATA.....................................................................................................................................................................2112.002100010
................................................................................................AGGATACATTCAGTATACGTAT......................................................................................................................................................................2212.002200000
.................................................................................................GGATACATTCAGTATACGTAC......................................................................................................................................................................2112.002000020
...........................................................TTACGTATACTGAAGGTAC..............................................................................................................................................................................................................1911.001000001
.............................................................ACGTATACTGAAGGTATA.............................................................................................................................................................................................................1811.001100000
...........................................................TTACGTATACTGAAGGTATACG...........................................................................................................................................................................................................2211.001000010
...............................................................GTATACTGAAGGTATACC...........................................................................................................................................................................................................1811.001000010
...........................................................TTACGTATACTGAAGGTATAT............................................................................................................................................................................................................2111.001100000
.................................................................................................GGATACATTCAGTATACGTATT.....................................................................................................................................................................2211.001000010
...........................................................TTACGTATACTGAAGGTATACCGGTA.......................................................................................................................................................................................................2611.001100000
..................................................................................GATAGGATACACTCAGGATACATTCAGT..............................................................................................................................................................................2811.001000001
.............................................................ACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2211.001100000
..........................................................GTTACGTATACTGAAGGTATAC............................................................................................................................................................................................................2211.001100000
...................................................................................ATAGGATACACTCAGGAT.......................................................................................................................................................................................1811.001001000
...........................................................TTACGTATACTGAAGGTTC..............................................................................................................................................................................................................1911.001000001
.................................................................................................GGATACATTCAGTATACGT........................................................................................................................................................................1911.001100000
..................................................................................................GATACATTCAGTATACGTATAA....................................................................................................................................................................2211.001000010
.............................................................................................CTCAGGATACATTCAGTA.............................................................................................................................................................................1811.001000001
.................................................................ATACTGAAGGTATACCGGT........................................................................................................................................................................................................1911.001000001
..................................CCCGCGTTGCTGGTGTTTCCTCGTG.................................................................................................................................................................................................................................2511.001000010
.............................................................................................CTCAGGATACATTCAGTATACGTATA.....................................................................................................................................................................2611.001000001
..................................................................................................GATACATTCAGTATACGTAT......................................................................................................................................................................2011.001100000
............................................................................ATACCGGATAGGATACACTCAGGAT.......................................................................................................................................................................................2511.001000001
.........................................................TGTTACGTATACTGAAGGTAT..............................................................................................................................................................................................................2111.001000001
...........................................................TTACGTATACTGAAGGTATACCT..........................................................................................................................................................................................................2311.001000010
..................................................................................GATAGGATACACTCAGGATAC.....................................................................................................................................................................................2111.001100000
...........................................................TTACGTATACTGAAGGTA...............................................................................................................................................................................................................1811.001100000
............................................................TACGTATACTGAAGGTATACCG..........................................................................................................................................................................................................2211.001100000
.......................................................CGTGTTACGTATACTGAAGGTATAC............................................................................................................................................................................................................2511.001100000
droGri2
-----------------------------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTC----------TA---CAAGAGTGTCCTTTGGAGT-GTC----C---------------------------CCCCGGTG------TAAACAC---A-----------------------------------------G-----------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................TTACGTATACTGAAGGTAT..............................................................................................................................................................................................................19132.00321319
...........................................................TTACGTATACTGAAGGTATA.............................................................................................................................................................................................................20118.0018171
...........................................................TTACGTATACTGAAGGTATAC............................................................................................................................................................................................................21115.0015150
...........................................................TTACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2219.00990
...........................................................TTACGTATACTGAAGGTATACCGG.........................................................................................................................................................................................................2414.00440
............................................................TACGTATACTGAAGGTATACC...........................................................................................................................................................................................................2114.00440
............................................................TACGTATACTGAAGGTAT..............................................................................................................................................................................................................1813.00330
............................................................TACGTATACTGAAGGTATA.............................................................................................................................................................................................................1912.00220
...........................................................TTACGTATACTGAAGGTATACCGT.........................................................................................................................................................................................................2412.00211
............................................................TACGTATACTGAAGGTATAC............................................................................................................................................................................................................2012.00220

Generated: 10/20/2015 at 06:54 PM