ID:

dan_549

 Coordinate:

scaffold_12916:5837630-5837724 +

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.2 -9.1 -9.0

Flybase annnotation

CDS [Dana\GF15253-cds]; exon [dana_GLEANR_16019:13]; exon [dana_GLEANR_16019:12]; CDS [Dana\GF15253-cds]; intron [Dana\GF15253-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------##################################################
CAGCTCCTGCGGCAGGCCGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGTGAGATAACACGTTCTAACCAACTGATATGAAACTACGAATGTTTTTATCGCTGTCGATTCGAACGATCTCTCATATAACCGTACCTATTACAGTGCGCGGTGTCTGTACCAGAGCCCCACCAGCATCCAAAGGCCCGATTGCT
*************************************************************(((((......(((((((.(((((.......))))))))))..))......)))))...*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
.....................................................................................................GCTGTCGATTCGAACGATC........................................................................... 19 0 1 6.00 6 0 4 1 0 1 0
.............................................................CGTTCTAACCAACTGATATGAAACTACG.......................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0
............................................................................................GTTTTTATCGCTGTCGATTCGA................................................................................. 22 0 1 3.00 3 0 3 0 0 0 0
..................................................................................................ATCGCTGTCGATTCGAACGATC........................................................................... 22 0 1 3.00 3 0 3 0 0 0 0
.............................................................CGTTCTAACCAACTGATATGAAACT............................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0
..................................................................................AACTACGAATGTTTTTATCGCT........................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................TACGAATGTTTTTATCGCTGT......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................TGATATGAAACTACGAATGT..................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
........................................................................................GAATGTTTTTATCGCTGTCGATTC................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..................................................................................AACTACGAATGTTTTTATCGC............................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
............................................................................................GTTTTTATAGCTGTCGATTCG.................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................GCTGTCGATTCGAACGATCT.......................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
........................................................TGACACGTTCTAACCAACTGA...................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
................................................................................................TTATCGCTGTCGATTCGAACGATC........................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
...................................................................AACCAACTGATATGAAACTACGAATGT..................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0
.............................................................CGTTCTAACCAACTGATAT................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................AACTGATATGAAACTACGAATGT..................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGTTTTTATCGCTGTCGATTCGAACG.............................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................GTTCTAACCAACTGATATGAAACTACG.......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
............................................................................................GTTTTTATCGCTGTCGATTC................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
............................................................................................GTTTTTATCGCTGTCGATTCG.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................ATGAAACTACGAATGTTTTTATCGC............................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................AACTGATATGAAACTACGAAT....................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
................................................................TCTAACCAACTGATATGAAACT............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
......................................................GATAACACGTTCTAACCAACTGATAT................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................ACGAATGTTTTTATCGCTGTCGAT..................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................................GTTTTTATCGCTGTCGATTCGAACGATC........................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
................................................................................GAAACTACGAATGTTTTTATCGC............................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................GATATGAAACTACGAATGTTTT.................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................TATCGCTGTCGATTCGAACGATC........................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
....................................TTGCTGGACAGGAGGTGATA........................................................................................................................................... 20 3 3 0.33 1 0 0 1 0 0 0
.........................................................................................................................................................GTCTGTACCCAACCCCCACC...................... 20 3 9 0.11 1 0 0 0 1 0 0
............................................................................ATGTGAGACTACGTATGTT.................................................................................................... 19 3 10 0.10 1 0 0 0 0 1 0
.........................AAGACATCCAGTGGTTGGA....................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0
...............................................................................................TTTATCGCTGTCGATGCTT................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
..............................................................................ATGAAACTACGGATGGTTC.................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

GTCGAGGACGCCGTCCGGCGGAGGGTCCTGTTGGTCACCGACCTGTTCTCCACTCTATTGTGCAAGATTGGTTGACTATACTTTGATGCTTACAAAAATAGCGACAGCTAAGCTTGCTAGAGAGTATATTGGCATGGATAATGTCACGCGCCACAGACATGGTCTCGGGGTGGTCGTAGGTTTCCGGGCTAACGA
***************************************************************************(((((......(((((((.(((((.......))))))))))..))......)))))...************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M058
embryo
 V039
embryo
 V105
male body		 V106
head
 M044
female body
..................................................................................TTGATGCTTGCAAAAATTG.............................................................................................. 19 2 3 0.67 2 0 2 0 0 0 0
.................................................................................TATGATGCTTACAAAATTGGCG............................................................................................ 22 3 2 0.50 1 0 0 1 0 0 0
.................................................................................................................................................................GTATCGGGGGGGTCTTAGGTT............. 21 3 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................GGGGTGGTCTTGGGTTTC........... 18 2 9 0.22 2 2 0 0 0 0 0
......................................................................................................................................................................AGGGGGGTCGTAGGTTTCTG......... 20 3 7 0.14 1 0 0 0 1 0 0
..................................................................................................................................................................TCTCGGGGGGGTCCTGGGTT............. 20 3 8 0.13 1 1 0 0 0 0 0
.................................................................................................................................................................GTCTAGGGGGGGTCGTCGGTT............. 21 3 9 0.11 1 1 0 0 0 0 0
....................................................................................................................................................................TGAGGGGGGTCGTAGGTTTC........... 20 3 10 0.10 1 0 0 0 0 0 1
..........................................................CGTGCTAGATTGGTTAACT...................................................................................................................... 19 3 11 0.09 1 0 0 0 1 0 0
................................................................AGATTGGTTGACTCGACTT................................................................................................................ 19 2 13 0.08 1 0 0 0 0 1 0
................................................................AGATTGGTTGACTATATGAT............................................................................................................... 20 3 13 0.08 1 0 0 0 0 1 0
......................................................................................................................................................................GGGGGGGTCGTGGGTTTC........... 18 2 14 0.07 1 1 0 0 0 0 0
...............................................................................ACGTTGATGCTTTCAAAA.................................................................................................. 18 2 15 0.07 1 0 0 1 0 0 0
.............................................................................................................................CTATGGGCATGGATATTGT................................................... 19 3 18 0.06 1 0 0 0 1 0 0
....................................................................................................................................................................TGGGGGTGGTCTTGGGTTTC........... 20 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................GGGTGGGTTGTAGGTTTCC.......... 19 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................TCGGGGTGGTCCCAGGTGT............ 19 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:5837580-5837774 + dan_549 CAGCTCCTGCGGCAGGCCGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-GAGAT--AACACGTTCTAACCAACTGATATGAAACTACGAATGTTTTTATCGCTGTCG----ATTCGA-ACGATCTCTCATAT------AAC--------------------------------------------------------------------CGTAC--CTATTACAGTGCGCGGTGTCTGTACCAGAGCCCCACCAGCATCCAAAGGCCCGATTGCT
droBip1 scf7180000396568:1004340-1004498 - CAACTTCTAAGACAGGCCGCTGCCCAGGACAACCAGTGGCTGGACAAGAGGT-ACGAT--CGA------------------------------AT----------CTCTCGTATAATTCAA-ACGATCTCTCATAT------AAC--------------------------------------------------------------------CGTCT--CTCCTACAGTGCCCGGTGTTTGTATCAGAGCCCCACCAGCATCCAAAGGCCCGATTGCT
droKik1 scf7180000302401:685550-685721 + CAGCTGCTGAGGCAGGCGGCCGCCCAGGACAACCAGTGGCTCGACAAGAGGT--GAAG--GAC----------------------------------------------------------ACTGATCTTAGAGAAAGG---------CAACA-------------------GCAAATTA----TATG--TAATTC---------TCTCACATCACTT--CCTTCACAGTGCGAGGTGCTTGTACCAGAGTCCCAGCAACATTCAGAGGCCCGATTGCT
droFic1 scf7180000453924:1748568-1748740 + CAGCTGCTGCGGCAGGCCGCCTCGCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGAATCG---------CT-C--------------------ATTCGCTC----ACTGATCCATTC---------TCTCACATCTCTT--CCCTCACAGCGCGCGGGGCCTGTACCAGAGCCCGGGGAGCATCCAGAGGCCCGACTGCT
droEle1 scf7180000490728:519610-519783 + CAACTCCTGCGGCAGGCGGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-GCGGT--TTC----------------------------------------------------------ATTGATCTTGGAGACCTTTTCG-----------------------------ACTATCCT----AGTGATCCATTC---------TCTCACATCACTT--CCCTTATAGCGCGAGGTGCCTGTACCAGAGTCCCACCAACATTCAGAGGCCCGACTGCT
droRho1 scf7180000777886:5814-5981 - CAACTGCTGAGACAAGCGGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTTGGAGAC------G-----------------------------GCTGGCTT----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGCGCGCGGTGCCTGTACCAGAGTCCCACCAACATTCAGAGGCCCGACTGCT
droBia1 scf7180000302261:2154075-2154246 + CAGCTGCTCAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGACTGA---------TC-C--------------------ATT-CCTT----ACTGATCCACTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGCCCCACCAACATTCAGAGGCCCGATTGCT
droTak1 scf7180000415709:76383-76555 - CAGCTGCTCAGGCAGGCCGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGACTGA---------TC-C---------------------CGATCTT---TACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCACCAACATTCAGAGGCCCGATTGCT
droEug1 scf7180000409554:2307456-2307628 - CAGCTGCTCCGACAAGCAGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGAT------CGCTGATC-----------------------CGA-TTT----ACTGATCTATTC---------TCTCACATCACTT--CCCTCACAGCGCGCGGTGCCTGTACCAAAGCCCCACTAACATTCAGAGGCCCGACTGCT
dm3 chr2L:3767571-3767738 + dme-mir-1004 CAGCTGCTCAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCACGGTGCTTGTACCAGAGTCCCAGCAACATTCAGCGGCCCGACTGCT
droSim2 2l:3620502-3620669 + dsi_282 CAGCTGCTCAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCAGCAACATTCAGCGGCCCGACTGCT
droSec2 scaffold_5:1870650-1870817 + dse_75 CAGCTGCTTAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCAGCAACATTCAGCGGCCCGACTGCT
droYak3 2L:3769256-3769423 + dya_170 CAGCTGCTCCGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGATGTTTGTACCAGACGCCCAGCAACATTCAGCGGCCCGACTGCT
droEre2 scaffold_4929:3813995-3814162 + der_51 CAGCTGCTCAGACAGGCGGCCGCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCAATC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCAGCAACATTCTGCGGCCGGACTGCT
dp5 4_group3:4962003-4962181 - dps-mir-2559 AATCTGCTGCGCCAGGCTGCGTCCCAGGATAACCAGTGGCTGGACAAGAGGTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGAAAAA------AAAAA--------CC------------ATTAACGT----GAGGCTTCG-TT---------TCTCACATCATTTTCCCCTCACAGTGCCCGGTGCCTGTACCAGGCTCCGACCAGCATTCAGAGGCCTGATTGCT
droPer2 scaffold_1:6454647-6454823 - dpe_108 AATCTGCTGCGCCAGGCTGCCTCCCAGGATAACCAGTGGCTGGACAAGAGGTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGAAAAA---------TA-A------CC------------ATTAACGT----GAGGCTTCG-TT---------TCTCACATCATTTTCCCCTCACAGTGCCCGGTGCCTGTACCAGGCTCCGACCAGCATTCAGAGGCCTGATTGCT
droWil2 scf2_1100000004521:9298728-9298904 - AATCTTTTGCGTCAGGCGGCTTCACAGGATAATCAATGGTTGGATAAAAGGT--GGGG--TAC----------------------------------------------------------AACAACAACAAAAAT------------------------------------ACGAATAT----AATGGTAAACTCTCTCTCTCATCTCTTATCATTTTCTCCTCACAGTGCGCGTTCACTTTATCAGAGTCCATCGAGCATAATTCGGCCCGATTGCT
droVir3 scaffold_12963:14941225-14941399 - AATTTGCTGCGCCAGGCGGCCACACAGGATAATCAGTGGCTGGACAAAAGGT-TGGGG--CAC----------------------------------------------------------ATTGATCTTCAAGAAACT---------CA-CA-------------------GCCAGCTC----ATTTACTCACTCTCTC-----TCTCTT---CTCT--CCCTCACAGTGCCCGCTGTCTGTACCAGAGCCCAGGCAACATTGTGCGACCCGATTGCT
droMoj3 scaffold_6500:17898416-17898581 - AATTTGCTGCGCCAAGCGGCCAATCAGGATAATCAGTGGCTGGACAAGAGGT-AA-------------------------------------------------------------------TTGATCACTCCTAT------CTCTGTCT-----------------------CTCTTTCTCTTTC----TGACTC---------TCTCCCA-CTCTT--TATTTGTAGTGCTCGCTGCCTGTACCAGAGCCCGGGCAGCATTGTGCGACCCGATTGCT
droGri2 scaffold_15126:4437332-4437532 + AACTTGCTGCGCCAAGCGGCCACTCAAGACAATCAGTGGCTGGACAAAAGGT-AGGAGAGCAC----------------------------------------------------------ATTGATCTTGAAGAAACT---------TG-CAGAAAACTCTCTAATACTCT-CACTCCATTTCTC----TAACTCTCCCTCTC-TCTTATTTAACTT--CA-TTTTAGTGCGCGCTGTTTATATCAGAGCCCCGCCAGCATTGTGCGGCCCGATTGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAGCTCCTGCGGCAGGCCGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-GAGAT--AACACGTTCTAACCAACTGATATGAAACTACGAATGTTTTTATCGCTGTCG----ATTCGA-ACGATCTCTCATAT------AAC--------------------------------------------------------------------CGTAC--CTATTACAGTGCGCGGTGTCTGTACCAGAGCCCCACCAGCATCCAAAGGCCCGATTGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................GCTGTCG----ATTCGA-ACGATC.......................................................................................................................................................1916.006000114
................................................................CGTTCTAACCAACTGATATGAAACTACG...........................................................................................................................................................................................2813.003300000
...............................................................................................GTTTTTATCGCTGTCG----ATTCGA-.............................................................................................................................................................2213.003000003
.....................................................................................................ATCGCTGTCG----ATTCGA-ACGATC.......................................................................................................................................................2213.003000003
................................................................CGTTCTAACCAACTGATATGAAACT..............................................................................................................................................................................................2512.002000002
.....................................................................................AACTACGAATGTTTTTATCGCT............................................................................................................................................................................2212.002200000
........................................................................................TACGAATGTTTTTATCGCTGT..........................................................................................................................................................................2111.001100000
.............................................................................TGATATGAAACTACGAATGT......................................................................................................................................................................................2011.001000010
...........................................................................................GAATGTTTTTATCGCTGTCG----ATTC................................................................................................................................................................2411.001100000
.....................................................................................AACTACGAATGTTTTTATCGC.............................................................................................................................................................................2111.001000001
........................................................................................................GCTGTCG----ATTCGA-ACGATCT......................................................................................................................................................2011.001000010
...................................................................................................TTATCGCTGTCG----ATTCGA-ACGATC.......................................................................................................................................................2411.001000010
......................................................................AACCAACTGATATGAAACTACGAATGT......................................................................................................................................................................................2711.001010000
................................................................CGTTCTAACCAACTGATAT....................................................................................................................................................................................................1911.001100000
..........................................................................AACTGATATGAAACTACGAATGT......................................................................................................................................................................................2311.001100000
..............................................................................................TGTTTTTATCGCTGTCG----ATTCGA-ACG..........................................................................................................................................................2611.001100000
.................................................................GTTCTAACCAACTGATATGAAACTACG...........................................................................................................................................................................................2711.001100000
...............................................................................................GTTTTTATCGCTGTCG----ATTC................................................................................................................................................................2011.001100000
...............................................................................................GTTTTTATCGCTGTCG----ATTCG...............................................................................................................................................................2111.001100000
.................................................................................ATGAAACTACGAATGTTTTTATCGC.............................................................................................................................................................................2511.001100000
..........................................................................AACTGATATGAAACTACGAAT........................................................................................................................................................................................2111.001000001
...................................................................TCTAACCAACTGATATGAAACT..............................................................................................................................................................................................2211.001100000
.......................................................GAT--AACACGTTCTAACCAACTGATAT....................................................................................................................................................................................................2611.001100000
.........................................................................................ACGAATGTTTTTATCGCTGTCG----AT..................................................................................................................................................................2411.001100000
...............................................................................................GTTTTTATCGCTGTCG----ATTCGA-ACGATC.......................................................................................................................................................2811.001100000
...................................................................................GAAACTACGAATGTTTTTATCGC.............................................................................................................................................................................2311.001100000
..............................................................................GATATGAAACTACGAATGTTTT...................................................................................................................................................................................2211.001000001
....................................................................................................TATCGCTGTCG----ATTCGA-ACGATC.......................................................................................................................................................2311.001100000
droBip1
CAACTTCTAAGACAGGCCGCTGCCCAGGACAACCAGTGGCTGGACAAGAGGT-ACGAT--CGA------------------------------AT----------CTCTCGTATAATTCAA-ACGATCTCTCATAT------AAC--------------------------------------------------------------------CGTCT--CTCCTACAGTGCCCGGTGTTTGTATCAGAGCCCCACCAGCATCCAAAGGCCCGATTGCTSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCTGCTGAGGCAGGCGGCCGCCCAGGACAACCAGTGGCTCGACAAGAGGT--GAAG--GAC----------------------------------------------------------ACTGATCTTAGAGAAAGG---------CAACA-------------------GCAAATTA----TATG--TAATTC---------TCTCACATCACTT--CCTTCACAGTGCGAGGTGCTTGTACCAGAGTCCCAGCAACATTCAGAGGCCCGATTGCTSizeHit CountTotal NormTotal
No Reads
droFic1
CAGCTGCTGCGGCAGGCCGCCTCGCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGAATCG---------CT-C--------------------ATTCGCTC----ACTGATCCATTC---------TCTCACATCTCTT--CCCTCACAGCGCGCGGGGCCTGTACCAGAGCCCGGGGAGCATCCAGAGGCCCGACTGCTSizeHit CountTotal NormTotal
No Reads
droEle1
CAACTCCTGCGGCAGGCGGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-GCGGT--TTC----------------------------------------------------------ATTGATCTTGGAGACCTTTTCG-----------------------------ACTATCCT----AGTGATCCATTC---------TCTCACATCACTT--CCCTTATAGCGCGAGGTGCCTGTACCAGAGTCCCACCAACATTCAGAGGCCCGACTGCTSizeHit CountTotal NormTotal
No Reads
droRho1
CAACTGCTGAGACAAGCGGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTTGGAGAC------G-----------------------------GCTGGCTT----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGCGCGCGGTGCCTGTACCAGAGTCCCACCAACATTCAGAGGCCCGACTGCTSizeHit CountTotal NormTotal
No Reads
droBia1
CAGCTGCTCAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGACTGA---------TC-C--------------------ATT-CCTT----ACTGATCCACTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGCCCCACCAACATTCAGAGGCCCGATTGCTSizeHit CountTotal NormTotal
No Reads
droTak1
CAGCTGCTCAGGCAGGCCGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGACTGA---------TC-C---------------------CGATCTT---TACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCACCAACATTCAGAGGCCCGATTGCTSizeHit CountTotal NormTotal
No Reads
droEug1
CAGCTGCTCCGACAAGCAGCCTCGCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ACTGATCTCGGAGAT------CGCTGATC-----------------------CGA-TTT----ACTGATCTATTC---------TCTCACATCACTT--CCCTCACAGCGCGCGGTGCCTGTACCAAAGCCCCACTAACATTCAGAGGCCCGACTGCTSizeHit CountTotal NormTotal
No Reads
dm3
CAGCTGCTCAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAAAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCACGGTGCTTGTACCAGAGTCCCAGCAACATTCAGCGGCCCGACTGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAG..................................................2214429.0044290000322000225300000400000123000010653200000000002000101000000031000000000000000000001098001120005620182103936017674249358161500102631421302321241119011524013691589800000000000000000000000000000000000090200012800114341671740108700000388100900005070000000000000000001010138301700010000114013200308124014000012100000000000720002000000000013924235902100100003001000000000000200009230333000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGT.................................................2211042.0010420000110000000002000000003000000000000000000000000000000000000000000000000000000002001000001021105247200531172000000021003013002013309448000000000000000000001000000000000000192901200450110110460000009150100000702000000000000000000000000000010000000011021920002330400000110000000000010000000000100100483853950200010000302300000300000030003229841986201000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACA...................................................211916.00916000030000001000000100000150000102190000000000000000000000000010000000000000000000001800000000442404293610521362001000110000032205035803932736000000000000000000000000000000000000847021004510021122045200000145204000020100000000000000000000001000002000000000101500000240000000200000000000010100000000000007561300100000002000000000000000000001500000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................231822.0082200000000000000000000000000001300000000000000000000000000000000000000000000000000010000000001301152000011200000000100000020101200000711000000000000000000001000000000000000130021221022126382120000018150140000401800000200000000000200000000000000000004404500002340600001230000000000012000000000000000202016240458548000000400990000020001000700016030335200000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................241550.00550000000000000000000000000000005000000000000000000000000000001000000000000000000000000000000000005010000900000000000000000003000005800000000000000000000100000000000000091024001419016690000000034609000000600000000000000000100000000000100021004402000202010200000900000100101211001000000000003816101972515000100280390000021000003600023331114000110
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGA..................................................................................................................................................221175.00175000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000002000001100000000000000000000000000000000000030010002060300000000630100000501500000000000000000000000010000000000001000000007103000007000000000002000000000000000136271413501000020090000010000000000001510102100000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGA.................................................221136.001360000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000111131000306000100000000305001010201160000000000000000000000000000000000000101607003102050212000005000000000100000000000000000000000000000000000000000100000200000001000000000000000000000000000031320000000000000000000000000000000800020000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGG...................................................................................................................................................211105.0010500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010000000000000000010100000000000000000001000000010000000000000000004000205030200000004060000201300000000000000000000000000000000000002000200002001001011000000000000000000000000000042250253030000201000000000001050000712002000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAT------C-----------------------------...........................................................................................................26179.0079000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCAC....................................................20177.007700000000000000000000000020000000000000000000000000000000000000000000000000000000030000000000201512000018000000000000001010000106022000000000000000000000000000000000000120100310201020000008000000000000000000000000000000000000000000000001000100001201000001000000000000000000000000000001000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGT.................................................21167.0067000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000120000000000000010000000030110000000000000000000000000000000000001102001000000300000050020000000000000000000000000000000000000000000000000000003000000000000000000002000000000000000232300000000001021000001000000000001000000200000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAG..................................................21147.00470000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000220030100009000000000000001000000001012000000000000000000000000000000000000340300000200020000001000000000100000000000000000000000000100000000000000000000201000000000000000000000000000000000000120000000000000000000000000000000100000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGT.................................................23126.00260000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000200000110000001000000503000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000011020000000000000000000100000000000200020000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGA.................................................23124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000001000000000120000000000000000000000000000000000000120100010000020000007000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCA.....................................................19121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000111000000000000000001000000131000000000000000000000000000000000000020000200001010000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAA..................................................22121.00210000110000000000000000001000000000000000000000000000000000000000000000000000000001000000000050100000004000100000000102000000000000000000000000000000000000000000000000010000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAT..................................................22118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000007113000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGC.................................................22118.00180000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000002000000101000000000000000000000000000000000000000020100000000060000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACC...................................................21118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000003023000000000000000000000000000000000000110100000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAA.................................................................................................................................................23117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000100100000100000000000101000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000040000000201000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------...........................................................................................................26116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100100310000000000005100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000100000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------T-----------------------------C..........................................................................................................27115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAC..................................................22113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000006000000000000000000000002000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACA...................................................20113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000010000000010000000000000000000000000000000000000000000000110100001000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTC......................................................18113.00130000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000800000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CACATCACTT--CCCTCACAG..................................................19113.00130000000000000000000000001000000000000000000000000000000000000000000000000000000010000000010000010000000000000000000000000000000010000000000000000000000000000000000000100100000101000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGA.................................................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000030000000001030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100001000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGC................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000001000000000000000000000000000000000210000000100000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------.........................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000021000000001000000000000000000300001000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCG....................................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000002100000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAG..................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000100000000000000003000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................C------G-----------------------------GCGGTTTA----ACTGATCCATTC---------..........................................................................2218.0080000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CACATCACTT--CCCTCACAGT.................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000110000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACCT..................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------.........................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000012000000000000000000001000000000001000000000000000001000000000000000000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------ATC........................................................................................................2917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACG...................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGG................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGAA................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ACATCACTT--CCCTCACAGT.................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000100000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAC.................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000010000000000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGTG................................................2313.0030000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------A-----------------------------...........................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAT------.........................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000100000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCT......................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
......................................................GGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAGCTGCTCAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCAGCAACATTCAGCGGCCCGACTGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAG..................................................2211695.0016959942093480473002202601000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................241737.0073744455213002003101603000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACA...................................................211180.0018097210156200200100000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................231151.00151107184101010000306100
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGA..................................................................................................................................................221134.001349222812300000005001
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGG................................................................................................................................................24191.00914693600000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCAC....................................................20168.00689000154400000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCA.....................................................19140.0040500082700000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTC......................................................18140.0040000073300000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAG..................................................21129.00291000021700000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGT.................................................22128.0028610051300000300000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------.........................................................................................................................................25125.0025212100000000100000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAC..................................................22120.0020190100000000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGA.................................................22116.0016141100000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGG..................................................................................................................................................22111.0011101000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------...........................................................................................................26110.001030401200000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCT......................................................................................................................................................18110.001000003700000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAA.................................................................................................................................................2319.00962000000000001000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTC.....................................................................................................................................................1919.00940000500000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGC................................................................................................................................................2419.00951300000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------.........................................................................................................................................2518.00843000100000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCAC....................................................1918.00800002600000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGG...................................................................................................................................................2118.00830010300010000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACA...................................................2017.00700010600000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAC.................................................................................................................................................2316.00651000000000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCA.....................................................1816.00600000600000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGT.................................................2316.00620002200000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGT.................................................2115.00510001200000000001
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCG....................................................................................................................................................2015.00500001400000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGC.................................................2214.00440000000000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAG..................................................2014.00400002200000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGA.................................................2313.00330000000000000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGG.................................................2213.00330000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAT------.........................................................................................................................................2512.00220000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGT................................................................................................................................................2412.00220000000000000000
.................................................................................................................................................................................................................ACATCACTT--CCCTCACAG..................................................1811.00100000100000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCAC....................................................1811.00100000100000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAAT................................................................................................................................................2411.00110000000000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGC..................................................................................................................................................2211.00110000000000000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................2211.00101000000000000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................2311.00110000000000000000
.............................................................................................................................................................................CGGTTTA----ACTGATCCATTC---------TCTC......................................................................2311.00100000100000000000
................................................................................................................................................................................................................CACATCACTT--CCCTCACAG..................................................1911.00100000100000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------A-----------------------------...........................................................................................................2611.00110000000000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGAA................................................2411.00110000000000000000
........................................................GG--GAC----------------------------------------------------------ATTGATCTCGGAGG................................................................................................................................................1911.00110000000000000000
.......................................................................................................................................C------G-----------------------------GCGGTTTA----ACTGATCCAT.....................................................................................2011.00100000100000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACA...................................................1911.00100000100000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCCAG...................................................2130.33110000000000000000
droSec2
CAGCTGCTTAGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCAGCAACATTCAGCGGCCCGACTGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAG.................................................................................................................................................231124.001244103674
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAG..................................................221119.001193521666
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGA................................................................................................................................................24155.0055212527
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACA...................................................21127.002780118
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGT.................................................22123.0023001211
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGT.................................................21119.001910216
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGA..................................................................................................................................................2218.0081025
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGT.................................................2314.0040004
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGAC------G-----------------------------...........................................................................................................2614.0040031
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTG...................................................................................................................................................2114.0040004
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAG..................................................2113.0033000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCAC....................................................2013.0031002
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCT....................................................................................................................................................2012.0020002
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGAA------.........................................................................................................................................2512.0020002
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGA.................................................2212.0021001
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGA.................................................2112.0021100
.........................................................G--GAC----------------------------------------------------------ATTGATCTCTGAGAC------G-----------------------------GC.........................................................................................................2211.0010100
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGA................................................................................................................................................2311.0010100
................................................................................................................................................................................................................CACATCACTT--CCCTCACAG..................................................1911.0010001
......................................................................................................................................AC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------T.........................................................................2411.0010001
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAG.................................................................................................................................................2211.0011000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCA.....................................................1911.0011000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGAT------T-----------------------------...........................................................................................................2611.0010001
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGC.................................................2211.0010001
.................................................................................................................................................................................................................ACATCACTT--CCCTCACAGT.................................................1911.0010001
.......................................................................................................................................C------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCT.......................................................................2511.0011000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAG..................................................2011.0011000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACA...................................................2011.0010001
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGC................................................................................................................................................2411.0010001
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCTGAGAC------.........................................................................................................................................2511.0010001
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTC.....................................................................................................................................................1911.0010001
droYak3
CAGCTGCTCCGACAAGCGGCCTCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCATTC---------TCTCACATCACTT--CCCTCACAGTGCGCGATGTTTGTACCAGACGCCCAGCAACATTCAGCGGCCCGACTGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAG..................................................221781.007813523002736263730000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................241402.004023313261181580000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACA...................................................211109.0010938485011610000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................231107.00107264302438101010
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGT.................................................22136.0036292281210000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGG................................................................................................................................................24135.0035350000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGA..................................................................................................................................................22129.002984013850000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCAC....................................................20122.002288003300000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAG..................................................21119.0019118000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------.........................................................................................................................................25116.0016140011000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGC................................................................................................................................................24111.001190100100000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACA...................................................2018.00817000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAC..................................................2218.00871000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------...........................................................................................................2617.00760000100000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGT.................................................2116.00602002200000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGG...................................................................................................................................................2115.00503002000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAG..................................................2015.00504001000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGT.................................................2314.00411011000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGA.................................................2214.00404000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------.........................................................................................................................................2513.00320010000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCA.....................................................1913.00330000000000
................................................................................................................................................................................................................CACATCACTT--CCCTCACAG..................................................1913.00303000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGA.................................................2312.00201000100000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGG..................................................................................................................................................2212.00220000000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACA...................................................1912.00201001000000
.................................................................................................................................................................................................................ACATCACTT--CCCTCACAG..................................................1812.00202000000000
................................................................................................................................................................................................................CACATCACTT--CCCTCACAGT.................................................2012.00202000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTC.....................................................................................................................................................1912.00220000000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................2312.00202000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAC.................................................................................................................................................2312.00210100000000
.......................................................GGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................2011.00110000000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGG................................................................................................................................................2311.00110000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACC...................................................2111.00110000000000
................................................................................................................................................................................................................CACATCACTT--CCCTCACA...................................................1811.00101000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCG....................................................................................................................................................2011.00100000100000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAT.................................................................................................................................................2311.00100000100000
...................................................................................................................................................................................................C---------TCTCACATCACTT--CCCTCACAG..................................................2311.00101000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCT......................................................................................................................................................1811.00100001000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGG.................................................2211.00110000000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGT................................................................................................................................................2411.00110000000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGA..................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAA..................................................2211.00110000000000
........................................................GG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................1811.00110000000000
droEre2
CAGCTGCTCAGACAGGCGGCCGCCCAGGACAACCAGTGGCTGGACAAGAGGT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------GCGGTTTA----ACTGATCCAATC---------TCTCACATCACTT--CCCTCACAGTGCGCGGTGCTTGTACCAGAGTCCCAGCAACATTCTGCGGCCGGACTGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAG..................................................221791.0079123146663584050
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................241297.00297531314412210
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................231205.0020560172531270
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACA...................................................211124.001244141313620
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGT.................................................221101.001013510111710
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGG...................................................................................................................................................21133.0033002013180
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGA..................................................................................................................................................22126.002610106180
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAG..................................................21120.002014100140
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCAC....................................................2019.0092000070
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAGT.................................................2117.0071010140
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACAGA.................................................2217.0072000050
...............................................................................................................................................................................................................TCACATCACTT--CCCTCACAG..................................................2017.0073011020
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGT.................................................2316.0060000060
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------G-----------------------------...........................................................................................................2615.0050000050
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAA.................................................................................................................................................2315.0050010130
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCA.....................................................1913.0030000030
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGC................................................................................................................................................2413.0030010020
................................................................................................................................................................................................................CACATCACTT--CCCTCACAG..................................................1913.0031000020
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAT.................................................................................................................................................2313.0030000030
...................................................................................................................................................................................................C---------TCTCACATCACTT--CCCTCACAG..................................................2312.0020100010
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAC------.........................................................................................................................................2512.0020000020
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTC.....................................................................................................................................................1912.0020000020
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAA------.........................................................................................................................................2512.0020000110
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGT................................................................................................................................................2412.0020010010
.................................................................................................................................................................................................................ACATCACTT--CCCTCACAG..................................................1812.0021000010
................................................................................................................................................................................................................CACATCACTT--CCCTCACAGT.................................................2012.0020000020
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCG....................................................................................................................................................2012.0020000200
.................................................................................................................................................................................................ATC---------TCTCACATCACTT--CCCTCACAG..................................................2511.0011000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGAT------.........................................................................................................................................2511.0010000010
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAGC.................................................2311.0010000010
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGT..................................................................................................................................................2211.0010000010
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACAC..................................................2211.0010100000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAG.................................................................................................................................................2211.0010000010
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCACA...................................................2011.0011000000
.....................................................TGGGG--GAC----------------------------------------------------------ATTGATCTCGG...................................................................................................................................................1911.0011000000
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGT...................................................................................................................................................2111.0011000000
...................................................T-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGAGA................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................TCACATCACTT--CCCTCAC....................................................1811.0011000000
...............................................................................................................................................................................GTTTA----ACTGATCCAATC---------TCTC......................................................................2111.0010000010
.............................................................................................................................................................................................................TCTCACATCACTT--CCCTCACG...................................................2111.0011000000
.....................................................................................................................................................................................................................................TGCGCGGTGCTTGTACCA................................1811.0011000000
..............................................................................................................................................................................................................CTCACATCACTT--CCCTCAC....................................................1911.0010000010
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGAGA.................................................................................................................................................2311.0010000010
..................................................GT-TGGGG--GAC----------------------------------------------------------ATTGATCTCGGG..................................................................................................................................................2211.0010000010
.............................................................................................................................................................................CGGTTTA----ACTGATCCAATC---------T.........................................................................2011.0010000010
...............................................................................................................................................................................................................................................................GCAACATTCTGCGGCCGGA.....1911.0010000100
dp5
AATCTGCTGCGCCAGGCTGCGTCCCAGGATAACCAGTGGCTGGACAAGAGGTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGAAAAA------AAAAA--------CC------------ATTAACGT----GAGGCTTCG-TT---------TCTCACATCATTTTCCCCTCACAGTGCCCGGTGCCTGTACCAGGCTCCGACCAGCATTCAGAGGCCTGATTGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAG..................................................221185.0018508422622141000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGT.................................................231104.001040163432364000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACA...................................................21156.0056038016020000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGC.................................................23121.002100615000000
..................................................GTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGA................................................................................................................................................25118.001802111020011
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGA.................................................2317.0070303010000
................................................................................................................................................................................................................CACATCATTTTCCCCTCACAG..................................................2116.0060600000000
...................................................................................................................................................................................................................ATCATTTTCCCCTCACAG..................................................1813.0030003000000
................................................................................................................................................................................................................CACATCATTTTCCCCTCACAGT.................................................2213.0030101010000
.................................................................................................................................................................................................................ACATCATTTTCCCCTCACAGT.................................................2113.0030001020000
................................................................................................................................................................................................................CACATCATTTTCCCCTCACA...................................................2013.0030300000000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAC..................................................2213.0030003000000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGTC................................................2412.0020011000000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAA..................................................2212.0020001010000
..................................................GTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGA..................................................................................................................................................2312.0020010000001
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCAC....................................................2012.0020002000000
..............................................................................................................................................................................................................CTCACATCATTTTCCCCTCACAGT.................................................2411.0010001000000
.................................................................................................................................................................................................................ACATCATTTTCCCCTCACAG..................................................2011.0010010000000
..................................................GTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGAA...............................................................................................................................................2611.0010010000000
................................................................................................................................................................................................................CACATCATTTTCCCCTCAC....................................................1911.0010100000000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACACCC................................................2411.0010001000000
................................................................................................................................................................................................................CACATCATTTTCCCCTCACAGTT................................................2311.0010001000000
.............................................................AT----------------------------------------------------------ACTGATTTTAGAGAAAAA------AAA...................................................................................................................................2311.0010001000000
..................................................................................................................................................................................................................CATCATTTTCCCCTCACAG..................................................1911.0010001000000
.................................................................................................................................................................................................................ACATCATTTTCCCCTCACA...................................................1911.0010001000000
................................................................................................................................................................................................................CACATCATTTTCCCCTCACAGA.................................................2211.0010100000000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAT..................................................2211.0010100000000
.......................................................................................................................................AAAA------AAAAA--------CC------------ATTAACGT----GAGGCTTC.......................................................................................2711.0010001000000
..................................................GTGTGTGG--GAT----------------------------------------------------------ACTGATTTT.....................................................................................................................................................2011.0010000000001
droPer2
AATCTGCTGCGCCAGGCTGCCTCCCAGGATAACCAGTGGCTGGACAAGAGGTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGAAAAA---------TA-A------CC------------ATTAACGT----GAGGCTTCG-TT---------TCTCACATCATTTTCCCCTCACAGTGCCCGGTGCCTGTACCAGGCTCCGACCAGCATTCAGAGGCCTGATTGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGT.................................................23150.005015018251
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAG..................................................22140.00400203890
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACA...................................................21114.0014040460
..................................................GTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGA................................................................................................................................................25111.0011200126
................................................................................................................................................................................................................CACATCATTTTCCCCTCACAG..................................................2114.004030100
................................................................................................................................................................................................................CACATCATTTTCCCCTCACAGT.................................................2214.004010300
..................................................GTGTGTGG--GAT----------------------------------------------------------ACTGATTTTAGAGAA...............................................................................................................................................2611.001000010
...............................................................................................................................................................................................................................................CTGTACCAGGCTCCGACCAGCATT................2411.001010000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGA.................................................2311.001010000
...............................................................................................................................................................................................................TCACATCATTTTCCCCTCACAGC.................................................2311.001000010
..................................................................................................................................................................................................................CATCATTTTCCCCTCACAG..................................................1911.001010000
................................................................................................................................................................................................................CACATCATTTTCCCCTCACA...................................................2011.001000010
droWil2
AATCTTTTGCGTCAGGCGGCTTCACAGGATAATCAATGGTTGGATAAAAGGT--GGGG--TAC----------------------------------------------------------AACAACAACAAAAAT------------------------------------ACGAATAT----AATGGTAAACTCTCTCTCTCATCTCTTATCATTTTCTCCTCACAGTGCGCGTTCACTTTATCAGAGTCCATCGAGCATAATTCGGCCCGATTGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................GTGCGCGTTCACTTTATCAGAGTCCAT........................2711.00100010
droVir3
AATTTGCTGCGCCAGGCGGCCACACAGGATAATCAGTGGCTGGACAAAAGGT-TGGGG--CAC----------------------------------------------------------ATTGATCTTCAAGAAACT---------CA-CA-------------------GCCAGCTC----ATTTACTCACTCTCTC-----TCTCTT---CTCT--CCCTCACAGTGCCCGCTGTCTGTACCAGAGCCCAGGCAACATTGTGCGACCCGATTGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................TACCAGAGCCCAGGCAACAT.................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................CAGTGGCTGGACAAAAGGC-A.................................................................................................................................................................................................................................2030.331000000000000000000000000000000000000000000000000000000000000100
droMoj3
AATTTGCTGCGCCAAGCGGCCAATCAGGATAATCAGTGGCTGGACAAGAGGT-AA-------------------------------------------------------------------TTGATCACTCCTAT------CTCTGTCT-----------------------CTCTTTCTCTTTC----TGACTC---------TCTCCCA-CTCTT--TATTTGTAGTGCTCGCTGCCTGTACCAGAGCCCGGGCAGCATTGTGCGACCCGATTGCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AACTTGCTGCGCCAAGCGGCCACTCAAGACAATCAGTGGCTGGACAAAAGGT-AGGAGAGCAC----------------------------------------------------------ATTGATCTTGAAGAAACT---------TG-CAGAAAACTCTCTAATACTCT-CACTCCATTTCTC----TAACTCTCCCTCTC-TCTTATTTAACTT--CA-TTTTAGTGCGCGCTGTTTATATCAGAGCCCCGCCAGCATTGTGCGGCCCGATTGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 06/11/2015 at 05:26 PM