ID:

dan_537

 Coordinate:

scaffold_12916:5020994-5021144 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.3 -35.2 -35.1

Flybase annnotation

exon [dana_GLEANR_15962:8]; CDS [Dana\GF15196-cds]; intron [Dana\GF15196-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGCCCACAGTGCGTGGGCGTTGATGAGGAGGAATAAGGCGGCAGCATCCCCATCCTCATTGGCATTCAGCAGCATCACCAAAAACTTGTTGCTGAAGTTCAGCAGCCAAACGAAAATAGACCCAATGGAGGTGGCAGCTTTAGATACATTTTTGTATCTAGCTGCGTGCCACTTTTTATTTTTTATAATCAGCATCATGAAGAGACTTGTGGG
********************************************************(((((((((((((......((....))....)).))))))))))).((((((((((............)))))))))).....((.((((.............((......)))))).))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V055
head
 V105
male body		 M044
female body
 V106
head
............................................................................................................................................................GACCCAATGGAGGTGGCAGC........................................................................... 20 0 1 2.00 2 1 0 0 1 0 0
...............................................................................................................................................................CCAATGGAGGTGGCAGCTTTAG...................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
........................................................GTTGATGAGGAGGAATAAGGC.............................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................GATGAGGAGGAATAAGGCGGCA.......................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0
...................................................................................................................................GAAGTTCAGCAGCCAAAC...................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................GTTCAGCAGCCAAACGAAAATAGACCC.......................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................CTAGCTGCGTGCCACTTTTTATT................................. 23 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................CCCAATGGAGGTGGCAGCTTTAG...................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................GATGAGGAGGAATAAGGCGG............................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0
............................................................................................................................................................GACCCAATGGAGGTGGCAGCTTTAGAT.................................................................... 27 0 1 1.00 1 0 0 0 0 0 1
....................................................................................................................................................................................................................................AGCATCATGAAGAGACTTGTG.. 21 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................GACCCAATGGAGGTGGCAGCTTTAGAC.................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................GGAGGTGGCAGCTTTAGATAC.................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................ATGGACCCAATGGAGGTGGCAC............................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................TGAAGTTCAGCAGCCAAAC...................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................GTTCAGCAGCCAAACGAAAAT................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................ACATTTTTGTATCTAGCTG................................................. 19 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................ATGTAGGTGGCAGCTTTAGATAC.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
......................................................................ATAAGGCGGCAGCATCCCCAT................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................ATAGACCCAATGGAGGTGGCAGCTT......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................CTCAGCATCATCAAGAGACTTGTGTG 26 3 1 1.00 1 0 1 0 0 0 0
...............................................................................................................ATCACCAAAAACTTGTTGCT........................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................ATCAGCATTATGAAGAGACT...... 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................ATTTTTGTATCTAGCTGCGTGC............................................ 22 0 1 1.00 1 0 1 0 0 0 0
..................................................GTGGGCGTTCATGAGGCTGAAT................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
..................................................GTGGGCGTTGATTAGGAG....................................................................................................................................................................................... 18 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................TTTTGTATCTAGCTGCGTGCCA.......................................... 22 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................GAGGTGGCAGCTTTAGATAC.................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
...................................................................CGAATAACGCGGCAGCATTCC................................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
....................................................................................................................CAAAAACTTGTTGCTGAA..................................................................................................................... 18 0 2 0.50 1 0 1 0 0 0 0
................................................................................................................................................................CAACGGAGGGGGCAGCTTTAA...................................................................... 21 3 3 0.33 1 0 0 1 0 0 0
..............................................................GAGGGGGAATAAGGCTGC........................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0
....................TTGGAGGGCAAGACCGGCTGC.................................................................................................................................................................................................................. 21 3 7 0.14 1 0 0 1 0 0 0
.............................................................................................................................GTTGCTGAAGTTTAGGCGCCA......................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0
......................................................GTGTTGATGAGGTGGAAT................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 1 0
...................ATTGGAGGGCAAGCCCG....................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 1 0 0 0
..................................................................................GATCCCCATCCTCGTTGCCA..................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0
.....................................................GGCGTTGATGAGGTGAAA.................................................................................................................................................................................... 18 2 15 0.07 1 0 0 0 0 0 1
......................GGAGGGTAAGCCCGCCTA................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................................................TTTATTTTTTATATTCACCA................... 20 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CGCCGTTCAGGAAGATACGGTACCTCCCGTTCGGGCAGACGGGTGTCACGCACCCGCAACTACTCCTCCTTATTCCGCCGTCGTAGGGGTAGGAGTAACCGTAAGTCGTCGTAGTGGTTTTTGAACAACGACTTCAAGTCGTCGGTTTGCTTTTATCTGGGTTACCTCCACCGTCGAAATCTATGTAAAAACATAGATCGACGCACGGTGAAAAATAAAAAATATTAGTCGTAGTACTTCTCTGAACACCC
***************************************************************************(((((((((((((......((....))....)).))))))))))).((((((((((............)))))))))).....((.((((.............((......)))))).))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 V039
embryo
.............................ATCGGGCATACGGGTGT............................................................................................................................................................................................................. 17 2 6 0.17 1 1 0
.............................................................................CCGTCGTCGGGGTCGGAGTA.......................................................................................................................................................... 20 2 6 0.17 1 0 1
..........................CCGTTCGGGCAGACGAA................................................................................................................................................................................................................ 17 2 18 0.06 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:5020944-5021194 + dan_537 GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGCCCACAGTGCGTGGGCGTTGATGAGGAGGAATAAGG--CG----G---C---A---------------------G--CATCCCCAT-CC----------------------------------------------------------------------------------------------TCATT--------GGCATT--CAGCAGCATCACCAAAAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGA-CCCAATGGAG--------------GTGGCAGCTTTAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTTTAT----------TTT-------------------------T-------TATAATCAGCATCATGAA---GAG-ACT-TGT--GGG--------
droBip1 scf7180000396366:119767-120021 + GCGGCAAATCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAATAAGGCGAGA---GA--C---A---------------------GCA-----------TC------------------------------------------------C--------------------------------------------TCACT--------GGCATCAGCAGCAGCATCACCAAAAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGACCCGGGTGGTG--------------GTGGCAGCTTTAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTTTAT---------TTTT-------------------------T-------TATAATCAGCATCATGAG-AGGAG-ATT-AGC--GGG--------
droKik1 scf7180000302684:1023244-1023473 - GGGGCAAATCCTTCTACGCCATGGAGGGCAAGCCGGTCTGTCCACAGTGCGTGGGCGTTGATGAGGAGGAATAGA---AGA---GG------A---------------------G--GAG--------TC------------------------------------------------C--------------------------------------------CAAC-----------CAT-AGCAGCAGCAGCACCA-AAACTTGTTGCTGAAGTTCATCA---GCAAGCAAAACGAAAATAGA-CCCGGTG-----------------GCAGCGGCTTCGGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------C-------TACTATCAGCGTCACGAG---GAGA--------------------
droFic1 scf7180000454003:192844-193102 + GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCGGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAATAGA---GGA---GATCCAACAGC------AATAGCA---ACAGCA-----------AC------------------------------------------------A--------------------------------------------GCAAC--------AGCAACAGCAACAGCAGCACCAAAAACATGTTGCTGAAGTTCAACAACAGCAGCCA-AACGAAAATAGA-------T-----------------ACAGCGGCTTTAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------TAAT-A--TATTATCACCGTCACGA-----AGAACT-GGC--GGC--------
droEle1 scf7180000491046:3574278-3574536 + GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCAGAGTGCGTGGGCGTCGATGAGGAGGAGTAGA---AGA---GATCCAACAGT------AACAGCAAAAACAGCA-----------GC------------------------------------------------A--------------------------------------------GCAGC--------AGCACCACCACCACCACCACCA-AAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTG-----------------ACAGCGGCTTTAGATACATTTTTGTATCT-------------------------AGTTGCGTGCCACTTTT-----------------------------------------T-------TATTATCAGCGTCATGA-----AGAAGTCGGC--GGC--------
droRho1 scf7180000779178:13854-14084 - GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTGTGTCCAAAGTGCGTGGGCGTCGATGAGGAGGAATAGG---AGA---GATCCAACAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCACCA-AAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTGGCA--------------GCAGCGGCTTTAGATACATTTTTGTATCT-------------------------AGTTGCGTGCCACTTTT-------------TTT-------------------------T-------TATTATCAACGTCATGA-----AGAACT-GGC--GGC--------
droBia1 scf7180000302422:4234117-4234344 + GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGG---AGA---GATCCCACAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGTG-----------------GCAGCGGCTTCAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------TTAA-G--TATCGGCGGCGTCAAGA-----AGAACT-CGC--GGC--------
droTak1 scf7180000415259:18834-19059 - GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGTGTCGACGAGGAGGAGTAGG---AGA---GATCAAACAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGAAGCAGCA--GACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTG-----------------GCAGCGGCTTCAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTAT-------------TTT-------------------------T-------TATTGTCGGCGTCATGA-----AGAACT-GGC--GG---------
droEug1 scf7180000409463:1718435-1718667 - GCGGCAAGTCGTTCTACGCCATGGAGGGCAAGCCCGTATGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGA---AGA---GATCCAAAAAC------AACAACAA---------------------------------------------------------------------------------------------------------------------------------------CAACAACAGCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTG-----------------GCAGCGGCTTCAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT--------------TT-------------------------T-------TATTATCAGCGTCATGAA-----GA--T-TTC--GGG--------
dm3 chr2L:19403469-19403697 - GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGACGAGGAGGAGTAGG---AGA---GATTCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGTGGCTTCAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAGGAGGAGAACT-CGC--GGC--------
droSim2 2l:18938679-18938907 - GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGACGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGTGGCTTCAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAGGAGGAGAACT-CGC--GGC--------
droSec2 scaffold_7:3019322-3019550 - GTGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGACGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCATCAGCA--AAATTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGTGGCTTCAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAGGAGGAGAACT-CGC--GGC--------
droYak3 2R:5900234-5900461 - GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCGGCGGCTTTAGATACATTCTGGTATCT-----------------------CTAGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAG---GAGAGCT-CGC--GGC--------
droEre2 scaffold_4845:4892320-4892545 + GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGCGGCTTTAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAG---GAGAACT-CGC--GGC--------
dp5 4_group4:6084791-6085076 + dps_1693 GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTGTGTCCACAGTGCGTGGGCGTGGATGAGGAGGAATAGGG--AG-CCAGATACACA----------------------------------CACGCACACACACATCAACAAGAAGCAAGAAGC--------------------------------------------------------------------------------------A-----AGAAGCAAGATACTGTTGTTGAAGTTCA------GCAGCCA--ACAAAAATAGA-CCCAGAGCCAGATACAGATACGATACA-----GTCAGACACATTTTTGTACGAGT---------AT-------GCGCGAGCTGCGTGCCACTTTTTGTGGCCGCTCGCTTT-------------------------T-------TACTATCACCACCATC----------CC-CGCTGGGG--------
droPer2 scaffold_16:806867-807145 - GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTGTGTCCACAGTGCGTGGGCGTGGATGAGGAGGAATAGGG--AG-CCAGATACACA----------------------------------CACGCACACACACATCAACAAGA------------------------------------------------------------------------------------------------AGCA--AGAAGCAAGATACTGTTGATGAAGTTCA------GCAGCCA--ACAAAAATAGA-CCCAGAGCCAGATACAGATACGATACA-----GTCAGACACATTTTTGTACGAGT---------AT-------GCGCGAGCTGCGTGCCACTTTTTGTGGCCGCTCGCTTT-------------------------T-------TACTATCACCACCATC----------CC-CGCTGGGG--------
droWil2 scf2_1100000004516:40948-41283 + dwi_1129 GCGGCAAATCCTTCTATGCCATGGAGGGTAAACCAGTCTGTCCACAATGTGTGGGCGTCGATGAGGAAGAATAAA---CAA---AG------AGA------AAGA-------A-------------------------------------------AGCAAAATGCAAATGGAGATGCGTTGGATAATGTGACATTTTAGAAATGCTCCAACAACGTTTCTTCTCTTTCGAATTTTTTTATT--CAACATCATCGTCA--TCATCTTTGTTGAAGTTCA------GCATACACAACGAAAATAGCCTTTAGC----------------------------TAGATACATTTTTGTATCTGTCA----GT-GGGCTCCCAGT-TTTGCGGCGTGCCACTTTT-----------------------------------------TTTATATTCTTTATCATCATCAGCAA---CAGAAAC-AGC--GGCAGTGGCAG
droVir3 scaffold_12723:3331831-3332128 - GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTTTGTCCGCAATGTGTGGGCGTCGATGAGGAGGAATAGG---CGC---CACC----AACAACAGCAACAGCA---GCAGC--------------------------------------------------------AGCAGCAGAAGCAGCAGAGGCA----GCAGAA---------------------------------GCAGCAGCAACAACAACAACAACAACTTGT---TGAAGTTCA------GCAGC----ACGAAAATAGCCCCCGCC----------------------------CAGATACAAT-TTGTATCTGC-ATATAGTTGTTTACCCAGCGGCAGCTGCGTCCCACTTTCTCC-----------TTCTCTCTCTCTCTGTTTCTGTTCTCCT-------TGCTCTCACCGCCTT------------------------------
droMoj3 scaffold_6500:6459848-6460140 + GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCGGTCTGTCCGCAGTGTGTGGGCGTCGATGAGGAGGAATAGG---CGTCCATAAC--CCAGCAACAGCAACAGCA---ACAGCA-----------GA------------------------------------------------G--------------------------------------------GCAGC--------GGCAGCGGCAGCGGCAGCAGCGACAACTTGT---TGAAGTTCA------GCA---A-CACGAAAATAGCCCCCG----------------------------TCCGGATACGAA-TTGTATCTAC-ATGAAATTGTTTACCCAGCGGCAGCTGCGTCCCACTTTCTGT-----CTCGCATTCACTCTCAATCTGTCTC---TCTCCG-------TG-TC------CCATT----------CT-CTTTGGGG-------G
droGri2 scaffold_15126:139126-139335 + GTGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCGCAGTGTGTGGGCGTTGACGAGGAGGAGTAAG---CA---------AACAGC------AGCA---------G--CA----------------------------------------------------------------------------------------------------------------------GCAACAGCAACAGCAGCAGCAGCAACTTGT---TGAAGTTCA------GCAGC----ACGAAAATAGCCCCCGCC--TAGATACAAA---------------------AAATTGTTGTATCTTT---------ATCCACCCAGCGTCAGCTGCGTGCCATTTTC-----------------------------------------T----------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGCCCACAGTGCGTGGGCGTTGATGAGGAGGAATAAGG--CG----G---C---A---------------------G--CATCCCCAT-CC----------------------------------------------------------------------------------------------TCATT--------GGCATT--CAGCAGCATCACCAAAAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGA-CCCAATGGAG--------------GTGGCAGCTTTAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTTTAT----------TTT-------------------------T-------TATAATCAGCATCATGAA---GAG-ACT-TGT--GGG--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................GA-CCCAATGGAG--------------GTGGCAGC.............................................................................................................................................................2012.002010010
...................................................................................................................................................................................................................................................................................................................CCAATGGAG--------------GTGGCAGCTTTAG........................................................................................................................................................2211.001001000
........................................................GTTGATGAGGAGGAATAAGG--C................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................GATGAGGAGGAATAAGG--CG----G---C---A---------------------.............................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................GAAGTTCA------GCAGCCA-AAC.......................................................................................................................................................................................................1811.001001000
..................................................................................................................................................................................................................................................................................GTTCA------GCAGCCA-AACGAAAATAGA-CCC..........................................................................................................................................................................................2711.001010000
.....................................................................................................................................................................................................................................................................................................................................................................CT-------------------------AGCTGCGTGCCACTTTTTAT----------T................................................................................2311.001001000
..................................................................................................................................................................................................................................................................................................................CCCAATGGAG--------------GTGGCAGCTTTAG........................................................................................................................................................2311.001010000
...........................................................GATGAGGAGGAATAAGG--CG----G---.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...............................................................................................................................................................................................................................................................................................................GA-CCCAATGGAG--------------GTGGCAGCTTTAGAT......................................................................................................................................................2711.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCATGAA---GAG-ACT-TGT--G..........2111.001001000
...............................................................................................................................................................................................................................................................................................................GA-CCCAATGGAG--------------GTGGCAGCTTTAGAC......................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................................................................................................GGAG--------------GTGGCAGCTTTAGATAC....................................................................................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................TGAAGTTCA------GCAGCCA-AAC.......................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................................................................................................................GTTCA------GCAGCCA-AACGAAAAT.................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................ACATTTTTGTATCT-------------------------AGCTG..........................................................................................................1911.001010000
......................................................................ATAAGG--CG----G---C---A---------------------G--CATCCCCAT-................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................ATAGA-CCCAATGGAG--------------GTGGCAGCTT...........................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................ATCACCAAAAACTTGTTGCT................................................................................................................................................................................................................................2011.001010000
...........................................................................................................................................................................................................................................................................................................................................................ATTTTTGTATCT-------------------------AGCTGCGTGC.....................................................................................................2211.001001000
.............................................................................................................................................................................................................................................................................................................................................................TTTTGTATCT-------------------------AGCTGCGTGCCA...................................................................................................2211.001001000
.........................................................................................................................................................................................................................................................................................................................GAG--------------GTGGCAGCTTTAGATAC....................................................................................................................................................2011.001010000
................................................................................................................................................................................................................................................................CAAAAACTTGTTGCTGAA.............................................................................................................................................................................................................................1820.501001000
droBip1
GCGGCAAATCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAATAAGGCGAGA---GA--C---A---------------------GCA-----------TC------------------------------------------------C--------------------------------------------TCACT--------GGCATCAGCAGCAGCATCACCAAAAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGACCCGGGTGGTG--------------GTGGCAGCTTTAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTTTAT---------TTTT-------------------------T-------TATAATCAGCATCATGAG-AGGAG-ATT-AGC--GGG--------SizeHit CountTotal NormTotal
No Reads
droKik1
GGGGCAAATCCTTCTACGCCATGGAGGGCAAGCCGGTCTGTCCACAGTGCGTGGGCGTTGATGAGGAGGAATAGA---AGA---GG------A---------------------G--GAG--------TC------------------------------------------------C--------------------------------------------CAAC-----------CAT-AGCAGCAGCAGCACCA-AAACTTGTTGCTGAAGTTCATCA---GCAAGCAAAACGAAAATAGA-CCCGGTG-----------------GCAGCGGCTTCGGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------C-------TACTATCAGCGTCACGAG---GAGA--------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCGGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAATAGA---GGA---GATCCAACAGC------AATAGCA---ACAGCA-----------AC------------------------------------------------A--------------------------------------------GCAAC--------AGCAACAGCAACAGCAGCACCAAAAACATGTTGCTGAAGTTCAACAACAGCAGCCA-AACGAAAATAGA-------T-----------------ACAGCGGCTTTAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------TAAT-A--TATTATCACCGTCACGA-----AGAACT-GGC--GGC--------SizeHit CountTotal NormTotal
No Reads
droEle1
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCAGAGTGCGTGGGCGTCGATGAGGAGGAGTAGA---AGA---GATCCAACAGT------AACAGCAAAAACAGCA-----------GC------------------------------------------------A--------------------------------------------GCAGC--------AGCACCACCACCACCACCACCA-AAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTG-----------------ACAGCGGCTTTAGATACATTTTTGTATCT-------------------------AGTTGCGTGCCACTTTT-----------------------------------------T-------TATTATCAGCGTCATGA-----AGAAGTCGGC--GGC--------SizeHit CountTotal NormTotal
No Reads
droRho1
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTGTGTCCAAAGTGCGTGGGCGTCGATGAGGAGGAATAGG---AGA---GATCCAACAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCACCA-AAACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTGGCA--------------GCAGCGGCTTTAGATACATTTTTGTATCT-------------------------AGTTGCGTGCCACTTTT-------------TTT-------------------------T-------TATTATCAACGTCATGA-----AGAACT-GGC--GGC--------SizeHit CountTotal NormTotal
No Reads
droBia1
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGG---AGA---GATCCCACAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGTG-----------------GCAGCGGCTTCAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------TTAA-G--TATCGGCGGCGTCAAGA-----AGAACT-CGC--GGC--------SizeHit CountTotal NormTotal
No Reads
droTak1
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGTGTCGACGAGGAGGAGTAGG---AGA---GATCAAACAGC------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGAAGCAGCA--GACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTG-----------------GCAGCGGCTTCAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTAT-------------TTT-------------------------T-------TATTGTCGGCGTCATGA-----AGAACT-GGC--GG---------SizeHit CountTotal NormTotal
No Reads
droEug1
GCGGCAAGTCGTTCTACGCCATGGAGGGCAAGCCCGTATGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGA---AGA---GATCCAAAAAC------AACAACAA---------------------------------------------------------------------------------------------------------------------------------------CAACAACAGCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGAACCCGGTG-----------------GCAGCGGCTTCAGATACATTTTTGTATCT-------------------------AGCTGCGTGCCACTTTT--------------TT-------------------------T-------TATTATCAGCGTCATGAA-----GA--T-TTC--GGG--------SizeHit CountTotal NormTotal
No Reads
dm3
GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGACGAGGAGGAGTAGG---AGA---GATTCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGTGGCTTCAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAGGAGGAGAACT-CGC--GGC--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TATTACCAGCGTCATGAGGAGGA......................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCACCCGGCG-----------------GCAGTGGC.............................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................GCTGAAGTTCA------GCAGCCA-AACGAAA...................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTCGACGAGGAGGAGTAGG---AG...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTTGGTATCT-------------------------AGCTGCGTGCCA...................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCTGAAGTTCA------GCAGCCA-AACGAAAAT.................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TAT..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TACGCCATGGAGGGCAAGCCCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCT-------------------------AGCTGCGTGC.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................TTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GAAGTTCA------GCAGCCA-AACGAAA...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCT-------------------------AGCTGCGTGCC....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GACGAGGAGGAGTAGG---AG...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AACTTGTTGCTGAAGTTC.........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTCCTTCTACGCCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CATGGAGGGCAAGCCCGTCTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGCCCGTCTGTCCACAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................CCGTCTGTCCACAGTGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................ATGGAGGGCAAGCCCGTCTGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................TTCA------GCAGCCA-AACGAAAAT.................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TAT..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGTGGCTTCAGATACATTTTGGT............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GGCG-----------------GCAGTGGCTTCAGATACATTTTGGT............................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGCGTCATGAGGAGG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCTGTCCACAGTGCGTGGGCGTCGACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ACCCGGCG-----------------GCAGTGGCTTCAGATAC....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................ATCT-------------------------AGCTGCGTGCCACTT................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ACATTTTGGTATCT-------------------------AGCTGCGTGCC....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTTCA------GCAGCCA-AACGAAAATA................................................................................................................................................................................................2211.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGAAGTTCA------GCAGCCA-AACGAA....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTC................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TATTACCAGCGTCATGAG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................CTGAAGTTCA------GCAGCCA-AACGAAAAT.................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGACGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGTGGCTTCAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAGGAGGAGAACT-CGC--GGC--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................ACATTTTGGTATCT-------------------------AGCTGC.........................................................................................................2012.00200100000000100000
...........................................................................................................................................................................................................................................................................................................................................................ATTTTGGTATCT-------------------------AGCTGC.........................................................................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................................CACCCGGCG-----------------GCAGTGGCTTCAGATA.....................................................................................................................................................2511.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCATGAGGAGGAGAACT-................2111.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCAGCGTCATGAGGAGGAGAACT-................2711.00101000000000000000
droSec2
GTGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGACGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCATCAGCA--AAATTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGTGGCTTCAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAGGAGGAGAACT-CGC--GGC--------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCGTCATGAGGAGGA......................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................ACTTTT-----------------------------------------T-------TATTACCAGCGTC................................2011.0010010
.....................................................................................................................................................................................................................................................AACAGCATCAGCA--AAATTGTT...................................................................................................................................................................................................................................2111.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAGGAGGAGAACT-CGC--...........2111.0010100
droYak3
GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCGGCGGCTTTAGATACATTCTGGTATCT-----------------------CTAGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAG---GAGAGCT-CGC--GGC--------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGCGTCATGAG---GAGAGCT-CGC--...........2511.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................ATTCTGGTATCT-----------------------CTAGCTGCGTGCC....................................................................................................2511.00100100000000
..........................................................................G---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCATCAGC..............................................................................................................................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................AACGAAAATAGCACCCGGCG-----------------GCGGC................................................................................................................................................................2511.00100100000000
.........................................................................................................................................................................................................................................................................................................AAAATAGCACCCGGCG-----------------GCGGC................................................................................................................................................................2111.00100010000000
...............................................................................................................................................................................................................................................................................................................................................GGCTTTAGATACATTCTGGT............................................................................................................................................2011.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAG---GAGAGCT-CGC--GGC--------2111.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................TCTGGTATCT-----------------------CTAGCTGCGTGC.....................................................................................................2211.00100100000000
..............................................................................................................................................................................................................................................................................................................AGCACCCGGCG-----------------GCGGCGGCTTTAGAT......................................................................................................................................................2611.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGTCATGAG---GAGAGCT-CGC--...........2311.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGCCACTTTT-----------------------------------------T-------TATTACCAGCGT.................................2411.00100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACCAGCGTCATGAG---GAGAGCT-C...............2611.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGTCATGAG---GAGAGCT-CGC--G..........2411.00100000100000
.................................................................................................................................................................................................................................................................A--AACTTGTTGCTGAAGTTCA------GCAGCC............................................................................................................................................................................................................2611.00100100000000
....................ATGGAGGGCAAGCCCGTCTGTCCACAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
...............................................................................GA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCATC.................................................................................................................................................................................................................................................2211.00100000010000
droEre2
GCGGCAAGTCCTTCTACGCCATGGAGGGCAAGCCCGTCTGTCCACAGTGCGTGGGCGTCGATGAGGAGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCATCAGCA--AACTTGTTGCTGAAGTTCA------GCAGCCA-AACGAAAATAGCACCCGGCG-----------------GCAGCGGCTTTAGATACATTTTGGTATCT-------------------------AGCTGCGTGCCACTTTT-----------------------------------------T-------TATTACCAGCGTCATGAG---GAGAACT-CGC--GGC--------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................GCAGCCA-AACGAAAATAGCAC............................................................................................................................................................................................2111.0010000010
...............................................................................................................................................................................................................................................................................................................GCACCCGGCG-----------------GCAGCGGCTTTAGAT......................................................................................................................................................2511.0010100000
.....................................................GGCGTCGATGAGGAGGAGTAGG---AGA---...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCAGCGTCATGAG---GAGAACT-CGC--...........2611.0010000010
............................................CAGTGCGTGGGCGTCGATGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
..........................................................CGATGAGGAGGAGTAGG---A................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
.................................CCGTCTGTCCACAGTGCGTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
...................................................................................................................................................................................................................................................................................................A-AACGAAAATAGCACCCGGCG-----------------GCAGC................................................................................................................................................................2611.0010100000
.........................................................................................................................................................................................................................................................................................................................................................ACATTTTGGTATCT-------------------------AGCTGCGTGCCACC.................................................................................................2811.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGCCACTTTT-----------------------------------------T-------TATTACCAGC...................................2211.0010100000
.......................................................................................................................................................................................................................................................................................................CGAAAATAGCACCCGGCG-----------------GCAGC................................................................................................................................................................2311.0010100000
..................................................................AGGAGTAGG---AGA---GATCCACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------A.........................................................................................................................................................................................................................................................2411.0010000010
............................................................................................................................................................................................................................................................................................................ATAGCACCCGGCG-----------------GCAGCGGCTTTAGAT......................................................................................................................................................2811.0010000001
dp5
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTGTGTCCACAGTGCGTGGGCGTGGATGAGGAGGAATAGGG--AG-CCAGATACACA----------------------------------CACGCACACACACATCAACAAGAAGCAAGAAGC--------------------------------------------------------------------------------------A-----AGAAGCAAGATACTGTTGTTGAAGTTCA------GCAGCCA--ACAAAAATAGA-CCCAGAGCCAGATACAGATACGATACA-----GTCAGACACATTTTTGTACGAGT---------AT-------GCGCGAGCTGCGTGCCACTTTTTGTGGCCGCTCGCTTT-------------------------T-------TACTATCACCACCATC----------CC-CGCTGGGG--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................GTGGGCGTGGATGAGGAGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100000001
............................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTGTGGCCGCTCGCTTT-------------------------T-------T............................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................A-CCCAGAGCCAGATACAGATACGATA....................................................................................................................................................................2611.0010000001000
...................................................................................................................................................................................................................................................................................................................................................................................T-------GCGCGAGCTGCGTGCCA...................................................................................................1811.0010100000000
............................................CAGTGCGTGGGCGTGGATGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................GTACGAGT---------AT-------GCGCGAGCTGCGTGCC....................................................................................................2611.0010000100000
..............................................................................................................................................AACAAGAAGCAAGAAGC--------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................1711.0010000000001
...................................................................GGAATAGGG--AG-CCAGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
............................................................................................................................................................................................................................................................................................................................GATACAGATACGATACA-----GTCAGAC......................................................................................................................................................2411.0010000100000
..................................................GTGGGCGTGGATGAGGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
..................................................................................CAGATACACA----------------------------------CACGCACACACA.....................................................................................................................................................................................................................................................................................................................................................................2230.3310010000000
droPer2
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTGTGTCCACAGTGCGTGGGCGTGGATGAGGAGGAATAGGG--AG-CCAGATACACA----------------------------------CACGCACACACACATCAACAAGA------------------------------------------------------------------------------------------------AGCA--AGAAGCAAGATACTGTTGATGAAGTTCA------GCAGCCA--ACAAAAATAGA-CCCAGAGCCAGATACAGATACGATACA-----GTCAGACACATTTTTGTACGAGT---------AT-------GCGCGAGCTGCGTGCCACTTTTTGTGGCCGCTCGCTTT-------------------------T-------TACTATCACCACCATC----------CC-CGCTGGGG--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................GTGGGCGTGGATGAGGAGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2117.007000007
..................................................................................................................................................................................................................................................................................................................................GATACGATACA-----GTCAGACAC....................................................................................................................................................2011.001100000
.................................CCGTGTGTCCACAGTGCGTGGGCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................................................................................................................................................................................................................................................................................................GTACGAGT---------AT-------GCGCGAGCTGCGTGCC....................................................................................................2611.001001000
droWil2
GCGGCAAATCCTTCTATGCCATGGAGGGTAAACCAGTCTGTCCACAATGTGTGGGCGTCGATGAGGAAGAATAAA---CAA---AG------AGA------AAGA-------A-------------------------------------------AGCAAAATGCAAATGGAGATGCGTTGGATAATGTGACATTTTAGAAATGCTCCAACAACGTTTCTTCTCTTTCGAATTTTTTTATT--CAACATCATCGTCA--TCATCTTTGTTGAAGTTCA------GCATACACAACGAAAATAGCCTTTAGC----------------------------TAGATACATTTTTGTATCTGTCA----GT-GGGCTCCCAGT-TTTGCGGCGTGCCACTTTT-----------------------------------------TTTATATTCTTTATCATCATCAGCAA---CAGAAAC-AGC--GGCAGTGGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................AATGGAGATGCGTTGGATAA....................................................................................................................................................................................................................................................................................................................2016.00660000
.......................................................................................................................................................................AATGGAGATGCGTTGGATAATGTGACA.............................................................................................................................................................................................................................................................................................................2713.00330000
...................................................................................................................................................................................................................................................................................................................................................................ATCTGTCA----GT-GGGCTCCCAGT-TTTGC............................................................................................................2612.00200020
............................................................................................................................................................................................................................................................................................................................................................TTTTTGTATCTGTCA----GT-GGGCTCCC.....................................................................................................................2512.00220000
.......................................................................................................................................................................AATGGAGATGCGTTGGATA.....................................................................................................................................................................................................................................................................................................................1912.00220000
.......................................................................................................................................................................................................................................................................................................................................................................................CCCAGT-TTTGCGGCGTGCC....................................................................................................1911.00100010
.....................................................................................................AAGA-------A-------------------------------------------AGCAAAATGCAAATGGAGATGC.............................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................TGAAGTTCA------GCATACACAACGAAAAT.................................................................................................................................................................................................2611.00100010
................................................................................................................................................................AAATGCAAATGGAGATGCGTT..........................................................................................................................................................................................................................................................................................................................2111.00100010
.............................AAACCAGTCTGTCCACAATGTGTGGGCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................GTCA----GT-GGGCTCCCAGT-TTTGCGGC.........................................................................................................2511.00100010
.......................................................................................................GA-------A-------------------------------------------AGCAAAATGCAAATGGAGATGCGT...........................................................................................................................................................................................................................................................................................................................2711.00100010
............................................................................................................................................................................................................................................................................................................................................................TTTTTGTATCTGTCA----GT-GGGCT........................................................................................................................2211.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATATTCTTTATCATCATCAGCAA---CAG.....................2911.00110000
.............................................AATGTGTGGGCGTCGATGAGGAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
....................................................................................................................................................................................................................................................CAACATCATCGTCA--TCATCTTT...................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................................................................................................................................................................................CATTTTTGTATCTGTCA----GT-GGGC.........................................................................................................................2311.00100010
...........................................................................................................................................................................GAGATGCGTTGGATAATGTGACA.............................................................................................................................................................................................................................................................................................................2311.00110000
.............................................AATGTGTGGGCGTCGATGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.............................................................................................................................................................GCAAAATGCAAATGGAGATGCGTT..........................................................................................................................................................................................................................................................................................................................2411.00100100
...............................................................................................................................................................................................................................................................................GAAGTTCA------GCATACACAACGAA....................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................................ATGCTCCAACAACGTTTCTTCTCTTT...........................................................................................................................................................................................................................................................................2611.00100010
.......................................................................................................GA-------A-------------------------------------------AGCAAAATGCAAATGGAGATGC.............................................................................................................................................................................................................................................................................................................................2511.00100001
.....................................................................................................AAGA-------A-------------------------------------------AGCAAAATGCAAATGGAG.................................................................................................................................................................................................................................................................................................................................2311.00100010
........................................................................................................A-------A-------------------------------------------AGCAAAATGCAAATGGAGATGC.............................................................................................................................................................................................................................................................................................................................2411.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGAAAC-AGC--GGCAGTGGC..2111.00100100
..............................................ATGTGTGGGCGTCGATGAGGAAGAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
......................................................................................................................................................................................................................................................................................................................................................................................TCCCAGT-TTTGCGGCGTGC.....................................................................................................1911.00101000
.....................................................................................................AAGA-------A-------------------------------------------AGCAAAATGCAAATGGA..................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................ATT--CAACATCATCGTCA--TCATCTTTGT.................................................................................................................................................................................................................................2711.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGAAAC-AGC--GGCAGTGGCA.2211.00100010
........................................................................................................A-------A-------------------------------------------AGCAAAATGCAAATGGAGATGCGTT..........................................................................................................................................................................................................................................................................................................................2711.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................CTCCCAGT-TTTGCGGCGTGCC....................................................................................................2111.00100010
.......................................................................................................................................................................AATGGAGATGCGTTGGATAATGTGAC..............................................................................................................................................................................................................................................................................................................2611.00110000
................................................................................................................A-------------------------------------------AGCAAAATGCAAATGGAGATGCGTT..........................................................................................................................................................................................................................................................................................................................2611.00100100
..........................................CACAATGTGTGGGCGTCGATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................................................................................CATCGTCA--TCATCTTTGT.................................................................................................................................................................................................................................1860.17100010
droVir3
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTTTGTCCGCAATGTGTGGGCGTCGATGAGGAGGAATAGG---CGC---CACC----AACAACAGCAACAGCA---GCAGC--------------------------------------------------------AGCAGCAGAAGCAGCAGAGGCA----GCAGAA---------------------------------GCAGCAGCAACAACAACAACAACAACTTGT---TGAAGTTCA------GCAGC----ACGAAAATAGCCCCCGCC----------------------------CAGATACAAT-TTGTATCTGC-ATATAGTTGTTTACCCAGCGGCAGCTGCGTCCCACTTTCTCC-----------TTCTCTCTCTCTCTGTTTCTGTTCTCCT-------TGCTCTCACCGCCTT------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................GC----ACGAAAATAGCCCCCGCC----------------------------CAGAT......................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GCAGAGGCA----GCAGAA---------------------------------GCAGCA............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................GTGGGCGTCGATGAGGAGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTCTGTTCTCCT-------TGCTCT.......................................2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CAAT-TTGTATCTGC-ATATAGTTGTTTACC......................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TACCCAGCGGCAGCTGCGTCCCACT.................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................................CAGC--------------------------------------------------------AGCAGCAGAAGCAGCAGAGGC..............................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.............CTATGCCATGGAGGGCAAGCCCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATAGTTGTTTACCCAGCGGC...............................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ACAAT-TTGTATCTGC-ATATAGT..............................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CAACTTGT---TGAAGTTCA------GCA...............................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................GG---CGC---CACC----AACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................GCAGAA---------------------------------GCAGCAGCAACAAC....................................................................................................................................................................................................................................................2090.111000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................AGAGGCA----GCAGAA---------------------------------GC................................................................................................................................................................................................................................................................1590.111000000000000000000000000000000000000000000000000000000000010000
.............................................................................................ACAACAGCAACAGCA---GCAGC--------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000100000000000000000000000000000000000000000000
.....................................................................................ACC----AACAACAGCAACAGCA---................................................................................................................................................................................................................................................................................................................................................................................................19120.081000000000000000010000000000000000000000000000000000000000000000
............................................................................................AACAACAGCAACAGCA---GCAGC--------------------------------------------------------AGC................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................CAACAGCA---GCAGC--------------------------------------------------------AGCAGC.............................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................A----GCAGAA---------------------------------GCAGCAGCAACA......................................................................................................................................................................................................................................................19200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................CAACAGCAACAGCA---GCAGC--------------------------------------------------------AGCAGC.............................................................................................................................................................................................................................................................................................................................25200.051000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................AACAGCA---GCAGC--------------------------------------------------------AGCAGCA............................................................................................................................................................................................................................................................................................................................19200.051000000000001000000000000000000000000000000000000000000000000000
droMoj3
GCGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCGGTCTGTCCGCAGTGTGTGGGCGTCGATGAGGAGGAATAGG---CGTCCATAAC--CCAGCAACAGCAACAGCA---ACAGCA-----------GA------------------------------------------------G--------------------------------------------GCAGC--------GGCAGCGGCAGCGGCAGCAGCGACAACTTGT---TGAAGTTCA------GCA---A-CACGAAAATAGCCCCCG----------------------------TCCGGATACGAA-TTGTATCTAC-ATGAAATTGTTTACCCAGCGGCAGCTGCGTCCCACTTTCTGT-----CTCGCATTCACTCTCAATCTGTCTC---TCTCCG-------TG-TC------CCATT----------CT-CTTTGGGG-------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........TCCTTCTATGCCATGGAGGGCAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTC---TCTCCG-------TG-TC------CCAT..............................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTGT-----CTCGCATTCACTCTC.......................................................................2111.001100000
...........................................GCAGTGTGTGGGCGTCGATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................TGTTTACCCAGCGGCAGCTGCGTCC.....................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................ATTGTTTACCCAGCGGCAGCTGCGTCCC....................................................................................................2811.001000001
............................................................................................................................................................................................................................................GGCAGCGGCAGCGGCAGCAGC..............................................................................................................................................................................................................................................21200.051100000
................................................................................................................................GA------------------------------------------------G--------------------------------------------GCAGC--------GGCAGCGGCA.........................................................................................................................................................................................................................................................18200.051000100
droGri2
GTGGCAAGTCCTTCTATGCCATGGAGGGCAAGCCCGTCTGTCCGCAGTGTGTGGGCGTTGACGAGGAGGAGTAAG---CA---------AACAGC------AGCA---------G--CA----------------------------------------------------------------------------------------------------------------------GCAACAGCAACAGCAGCAGCAGCAACTTGT---TGAAGTTCA------GCAGC----ACGAAAATAGCCCCCGCC--TAGATACAAA---------------------AAATTGTTGTATCTTT---------ATCCACCCAGCGTCAGCTGCGTGCCATTTTC-----------------------------------------T----------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAAC........................................................................................................................................................................................................................................18200.05110

Generated: 05/17/2015 at 10:37 PM