ID:

dan_475

 Coordinate:

scaffold_12916:106670-106820 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dana_GLEANR_15723:2]; CDS [Dana\GF14957-cds]; intron [Dana\GF14957-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTAACGAACGATCTACTCCTCCCGTTGTCTTCCCACCCACTTCAAAACCGATACCAATCGTCAAAAATAATTCAATTGTTTGTATGTAAATTATTGCTTGACGTCTTCCCTTCGTCACCCATCCTCTATGCCCAACCCACATCCAATCCTAAACAAAAAAAAAACCAAAAAAAACGAACAAAACCAAACCTATCTGTGCAGAGTGTCAGTGCGGGCAGCGTGGGACGTGGCGGACGCCGGCGCAGCGGCAG
*******************************************************************************************************************...................................................................................***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V105
male body		 V039
embryo
 V055
head
................................................................................................................................................................AAAACCAAAAAAAACGAACG....................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................GTGCAGAGTGTCAGTGCGGGC................................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................AAAAACGAACAAAACCAAACCTATCTGTG..................................................... 29 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................CGTGGGACGTGTCGGACGCCG............ 21 1 1 1.00 1 0 0 1 0 0 0
...................................................................................................................CACCCATCCTCTATGCCCAACCC................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................GTGGGACGTGGCGGACGCCGGCGCA....... 25 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................ATCGTGGGACGTGGCGGACGCCGGC.......... 25 1 1 1.00 1 1 0 0 0 0 0
..........................................CAACACCGGTACCAATCGTC............................................................................................................................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................CAAAACCAAACCTATCTGTGCAGA................................................. 24 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................GCAGAGTGTCAGTGCGGGCAGC................................ 22 0 1 1.00 1 0 0 0 1 0 0
................................................................................................................................................................AAAACCAAAAAAAACGAACC....................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................CAGCGTGGGACGTGGCGGACG............... 21 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................AAAAAAAAAACCAAAAAAAAC............................................................................ 21 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................ACAAAAGCAAAGCTATCCGTGC.................................................... 22 3 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................AAAACAAACGAACAAAACCA................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................AGAACAGTGTCAGTGCGGGCAGC................................ 23 3 2 0.50 1 0 0 0 0 0 1
................................................................................................................................................................AAACCCAAAAAAAACGAACA....................................................................... 20 1 2 0.50 1 0 0 0 0 1 0
.......................................................................................................................................................................AAAAAAACGAACGGACCCAAACC............................................................. 23 3 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................AAAAAAAAAGAACAAAACC.................................................................. 19 1 20 0.40 8 8 0 0 0 0 0
..........................................................................................................................................................................AAAACGAAAAAAACCAAACCCA........................................................... 22 2 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................CAACCAGAAAAAACGAACAGAAC................................................................... 23 3 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................................AAAACCAAAAAAAACTAACA....................................................................... 20 1 5 0.20 1 1 0 0 0 0 0
.......................................................................................................................................................AACAAAAAAAAAACCAAAAA................................................................................ 20 0 11 0.18 2 2 0 0 0 0 0
......................................................................................................................................................................AAAGAAAACGAACAGAACCAA................................................................ 21 2 6 0.17 1 0 0 0 0 1 0
....................................................................................................................................................................CCAAAAAAAGCGAACACCACCA................................................................. 22 3 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................................AAAAGAAACCCAAAAAAAACGAA......................................................................... 23 2 6 0.17 1 0 0 0 0 1 0
.................................................................................................TTCAAGTCTGCCCTTCGTCA...................................................................................................................................... 20 3 7 0.14 1 0 1 0 0 0 0
...................................................................................................................................................................AACAAAAAAAACGAACATACCCA................................................................. 23 3 8 0.13 1 1 0 0 0 0 0
........................................................................................................................................................................AAAAAACGAACAGCACCAAA............................................................... 20 2 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................................................................GATCGGGCAGCGTGGGACTT....................... 20 3 8 0.13 1 0 0 0 0 0 1
............................................................................................................................................................AAAAAGAACCAAAGAAAACGA.......................................................................... 21 2 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................ATAAAAAAACCAAAAAAAAC............................................................................ 20 1 9 0.11 1 1 0 0 0 0 0
......................................................................................................................................................................AAAAAAAAAGAACAAAAC................................................................... 18 1 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................GGGACGTGGCGGCTGACGGC.......... 20 3 10 0.10 1 0 0 1 0 0 0
.......................................................................................................................................................................AAAAAAACGAACACAAACTAACC............................................................. 23 3 11 0.09 1 1 0 0 0 0 0
...................................................................................................GAGGTCTTCCCTTCTCCACC.................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0
........................................................................................................................................................ACTCAAAAAAAACCAAAAAAAAC............................................................................ 23 2 11 0.09 1 1 0 0 0 0 0
.......................................................................................................................................................AAAAAGAAAGAAACCAAAAAAAACGA.......................................................................... 26 3 11 0.09 1 1 0 0 0 0 0
....................................................................................................................................................................CAAAAAAAAACGAACAACACC.................................................................. 21 2 11 0.09 1 1 0 0 0 0 0
......................................................................................................................................................................AAAAAAAAAGAACAAAACCA................................................................. 20 1 13 0.08 1 1 0 0 0 0 0
...............................................................................................................................................................AAGAACCAAAAAAAAAGAACAAATC................................................................... 25 3 15 0.07 1 1 0 0 0 0 0
.......................................................................................................................................................AACAAAAAAACAACCAAACAAAAC............................................................................ 24 2 16 0.06 1 1 0 0 0 0 0
........................................................................................................................................................ACAAAAAGAACACCAAAAAAAACC........................................................................... 24 3 17 0.06 1 1 0 0 0 0 0
......................................................................................................................................................................AAAAAAAACGAACCCAACCA................................................................. 20 2 18 0.06 1 1 0 0 0 0 0
...............................................................................................................................................................AAAAACAAAAAAAAACGAACA....................................................................... 21 1 18 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................GAAAAAAAACGATCAAAACC.................................................................. 20 2 18 0.06 1 1 0 0 0 0 0
......................................................................................................................................................................AAAAAAAGCGAACAACACC.................................................................. 19 2 19 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TGGCAGTGCGGGTATCGTG............................. 19 3 20 0.05 1 0 0 0 0 0 1
.................................................................................................................................................................AAACAAAAAAAAAAGAACAAAACC.................................................................. 24 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................AAAAAACCGATCAAAACCACA............................................................... 21 3 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................AAAAAAACGAACAAGCCCA................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................AAAAAAGCCAAAAAAAAC............................................................................ 18 1 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................................AAAAAGCAACAAAACCAAAC.............................................................. 20 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................AACAAAAAAAAACCCAAAAAA............................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................CCAAAACAAAAAAAAAACC..................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................AAAAAAACCAGAAAAAAC............................................................................ 18 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................AAAAAAACAGAAAAAACGAACAA...................................................................... 23 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................AAAAAAACGAAGAAAACC.................................................................. 18 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................AAAAAAAAAACCAAAAAAAA............................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................CAAAAAAAACACCAAAAAAAA............................................................................. 21 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................AAAAAAAAGAACAAAACC.................................................................. 18 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................AACCAAAAAAAACGCACCA...................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................ACAAAAAGAGAACCAAAAAAAA............................................................................. 22 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................GAAACAATAAAATAACCAAAAAAAA............................................................................. 25 3 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TGGCAGTGCGGGCAGTGTGT............................ 20 3 20 0.05 1 0 0 0 0 0 1
.............................................................................................................................................................AAAATAAACAAAAAACACGAACAAAA.................................................................... 26 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................GAACAAAAAAAAACCCAAAAAAAA............................................................................. 24 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................AAAAACCAAAAAAAACTAACC....................................................................... 21 2 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................AAAAAAACCAAAAAAGAC............................................................................ 18 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................AAAAAAACGAACAGCACCA................................................................. 19 2 20 0.05 1 0 0 0 0 1 0
...........................................................................................................................................................AAAAAAAAACCAGAAAAAAC............................................................................ 20 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................AACAACGAACAGAACCAAA............................................................... 19 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CATTGCTTGCTAGATGAGGAGGGCAACAGAAGGGTGGGTGAAGTTTTGGCTATGGTTAGCAGTTTTTATTAAGTTAACAAACATACATTTAATAACGAACTGCAGAAGGGAAGCAGTGGGTAGGAGATACGGGTTGGGTGTAGGTTAGGATTTGTTTTTTTTTTGGTTTTTTTTGCTTGTTTTGGTTTGGATAGACACGTCTCACAGTCACGCCCGTCGCACCCTGCACCGCCTGCGGCCGCGTCGCCGTC
*****************************************************...................................................................................******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V055
head
 V039
embryo
 M058
embryo
.................................................................................................................................CGGGTTCGGTGGAGGTTAGTAT.................................................................................................... 22 3 1 1.00 1 1 0 0 0
.................................................................................................................................CGGGTTGGGGGTAGGTTA........................................................................................................ 18 1 1 1.00 1 0 1 0 0
................................GGTGGGTGAAGTTTTGGCTG....................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0
..................................................................................................................................................................TTGGTTTTTGTTGGTTGTTTTGGGTT............................................................... 26 3 2 0.50 1 0 0 1 0
......................ACAACAGAAGGGTGGGTAA.................................................................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 1
........................AACAGAAGGGTGGGTAAT................................................................................................................................................................................................................. 18 2 5 0.20 1 0 0 1 0
..................................................................................................................................GGGTTGGGAGTAGGTAAAGAT.................................................................................................... 21 3 6 0.17 1 0 1 0 0
..................................................................................................................................GGGTTCGGTGGAGGTTAGTAT.................................................................................................... 21 3 7 0.14 1 1 0 0 0
.................GGAGGGCACCAAAAGGGTGA...................................................................................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0
.................................................................................................................................CGGATTGGGTGCAGGTT......................................................................................................... 17 2 9 0.11 1 0 1 0 0
...............................................................................................................AGCAATGGGTGGGACATAC......................................................................................................................... 19 3 10 0.10 1 0 1 0 0
......................................................................................................................................TGGGTGTAGGTTATGAGT................................................................................................... 18 2 12 0.08 1 0 0 0 1
.......................................................................................................AGAAGGGATGGAGTGGCTA................................................................................................................................. 19 3 14 0.07 1 0 1 0 0
...........................................................................................................................................GTAGGTTGGGATTAGTTATT............................................................................................ 20 3 14 0.07 1 0 0 1 0
.......................CAAAAGAAGGGTGGGTAA.................................................................................................................................................................................................................. 18 2 15 0.07 1 0 0 0 1
.................................................................................................................................GGGCTTGGGTGTAGCTTAG....................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:106620-106870 + dan_475 GTAACGAA--CGA-TCT-ACT------------CCTCCCGTT--GTCTTCCCAC----------------------------------------------------------------------------------CCACT------------TC--AA------------------AACCGATA-CCAATCGTCAA------------AAATAATT--CAA--TTGTTTGTATG-TAAATTATTGCTTGACGTCTTC-----CC-T-TCGTCAC----CCA--TCCTC--------T--ATGCCCA-------------------------------------A-C----CCACATCCAA-----TCCT--AAACA-AAAAAAAAAC-CAAA-------AAAAACG----AACAAAACCAAACCTATCTGT--GCAGAGTGTCAGTGCGGGCAGCGTGGGACG---------TGGCGGACGCCGGCG---CAGCGGCAG
droBip1 scf7180000396554:2174699-2174936 - GTAACGAA--CGA-TCA-ACTC----------TCCTCCCGTT--GTCTTCCCCT----------------------------------------------------------------------------------TCGCC------------------------------------------------TTCGTCTT------------CAATAATT--CAATTGTGTTTGTATG-TAAATTATTGCTTGACG-TGGT-----CA---------CCC--ACC--TCCTT--------T--ATACCCA-------------------------------------CCTCAATCCACATCCAA-----TCCT-----AA-A--AAAAAAC-CAAAAA--CCAAAC-CCGAACAAAC-C---AAAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGTGGGACG---------TGGTGGACGCCGGCG---CAGCGGCAG
droKik1 scf7180000302468:538814-539072 + GTAACGAA--CGA-TCA-ACC-----------AACGCCCGTTATGTGTTCCTAC------------------------------CC--------------------------------------------------CCACC------------A-CAAA------------------AACTGAAATCCAATCGACAA----------AAAAATAATC--CAA--TTATATGTATG-TACATTATTGCTTG-GGCCCGC-----CCCC------AA----CCATCTCCTTCTCCTCAAC--CTGTCCA--AACCATC-CACCCCA--------------------ATC----CAA-----AA-----TCCA-----CA-AAAA--A----AAAA------------------AAC-AAAACCAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGGGGACG---------TGGTGGACGCAAGCG---CAGCGGCAG
droFic1 scf7180000454111:796311-796554 + GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AACAAA------------------AACTGAAA-CCAATCGACAACAAACAAAAAAAAAATAATC--CTC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-C------AC----CCC--TCCTC--------C--CTGTCCA-------------------------------------CTC----CAACTCCCGAACCCATCCA-----CAAAAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GCAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAG
droEle1 scf7180000490640:255489-255720 - GTAACGAA--CGA-TCA-ACA---------------CCCGTTACGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AAAAAA------------------AACTGAAA-CCAATCGACAA-----------CAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAC-----CC-C------AC----CCA--TCCTC--------C--CCGTCCA-------------------------------------CTC----CCACACCCAATCCAATCCC-----CA-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GCAGAATGTCAGTGCGGGCACCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAG
droRho1 scf7180000779930:140633-140860 + GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------TAAAAA------------------AACTGAAA-CCAATCGACAA-----------AAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAC-----CC-C------AC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACCCCCGA-----TCCA-----CAAAAAC--A--------------------------AAC-AA-AACAACCCATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGACAG
droBia1 scf7180000302422:8681690-8681921 + GTAACGAA--CTA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA---AA-C----------AAAAAAACTGAAA-CCGATCGACAA-----------AAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCGA-----CCCA------CC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CA-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGAAGGCG---CAGCGGCAG
droTak1 scf7180000416008:298657-298904 + GTAACGAA--CTA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------CA---AAACCAAAACCAAAAAAAAAACTGAAA-CCGATCGACAA---------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCGA-----CCCA------AC----CCA--TCCTTC-------TACCTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CA-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAG
droEug1 scf7180000409463:161828-162050 + GTAACGAC--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA-AAA------------------AACTGATA-CCAATCGACAA----------AAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCC------CC-C------AC----CCA--TCCTC--------T--CCGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CA-AAA------------------------------AAC-A--AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAG
dm3 chr2L:7035219-7035456 + GTAACGAA--CGA-TCA-ACG---------------ACCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGACAACAA---AAAAAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-AACCA--AC----CCATATCCTC--------C--CTGTCCG-------------------------------------ATC----CCGCACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGAAG---------TGGTGGACGCAAGCG---CAGCGGCAG
droSim2 2l:6796014-6796242 + dsi_16279 GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGACAACAA------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCG-------------------------------------ATC----CCACACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAAGCG---CAGCGGCAG
droSec2 scaffold_3:2560199-2560426 + GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGACAACA-------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCG-------------------------------------ATC----CTACACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAAGCG---CAGCGGCAG
droYak3 2L:5878142-5878372 - GTAACGAA--CGA-TCC-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA---AA------------AAAAAAACTGAAA-CCAATCGACAA---------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CC-AAAC--A--------------------------AA--AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAG
droEre2 scaffold_4929:15945771-15946002 + GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA--AA------------------AACTGAAA-CCAATCGACAAAA----AAAAAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCA---CAGCGGCAG
dp5 4_group1:3610220-3610482 - GTAACGTA--CGAATCC-ACAACAAAAA--------C------------CCCAC----------------------------------------------------------------------------------CCACA-----ATC---CA-CAAA-------------AAAAAAAC--AAA-CC-----AA-----------AAAAAATTATTAAAAA--TTATATGTATG-TACATTATTGCTTG-CGACCGATCCCCCA-A------AA----CCA--ACCTC------------TGCCCCCATCCCATCCCATCCAAATCCAATATCCTGATTCCTGA----------------------TTCCGAAACA-AAAC--ATA--CAAA------------------AAC-----GAAACCTATCTGTGTATAGAGTGTCAGTGCGGGCAGCGGTGGACG---------TGGAGGACGCGGGCG---CAGCGATGG
droPer2 scaffold_5:1603391-1603651 + GTAACGTA--CGAATCC-ACAACAAAAA--------C------------CCCAC----------------------------------------------------------------------------------CCACA-----ATC---CA-CAAA-------------AAA--AAAACAAA-CCAAACCAAA-----------AAAAATTATTAAAAA--TTATATGTATG-TACATTATTGCTTG-CGACCGATCCCCCA-A------AA----CCA--ACCTC------------TGCCCCCATCCCATCCCATCCAAATCCAATATCCTG-------A----------------------TTCCGAAACA-AAAC--ATA--CAAA------------------AAC-----GAAACCTATCTGTGTATAGAGTGTCAGTGCGGGCAGCGGTGGACG---------TGGAGGACGCGGGCG---CAGCGATGG
droWil2 scf2_1100000004521:5106946-5107215 + GTAACGAA--CGA-TCG-AA---------C-CA---ACCGTTATGTGTGT------------GTCTTCCTCCTCCTCCTCTTCCTC--------------------------------------------------CTACC----------CCA---AAAACCAA------------AT-------C---------------------TAAAA---------------ATCTATT-AAAACTATTGCTTG-CGATCCT-----CC-C------CC--ACCTC--TGATT--------C--CTGA--A---ATCCT-----------------------------TTC----CCAAAATCCC-----TTTA-----CG-AAAAAAATA--TAAAAATGCCAAACA----ACAAACCAAAACCAACCTATCTGAATGTAGAATATCAGTGCGGGCAGCGGGGGACGAGTTGGCGGTGGCGGACGTGGACGGAGTAGTGGCAG
droVir3 scaffold_12723:2877506-2877727 - dvi_1391 GTAACGTG--CGA-TCA-ACAACGAA---C-TA---AACGTTATGTGTG---------------------------------------------------------------------TTTGT--GT-------------GA-AATGTCCCCCA-CAAA------------------ACATGAA--CAAAT-G---------------AAAAT-ATC--CAA--TTCTATGTATG-TACATTATTGCTTG-CGACTTC-----CA--------A-------C--TC--C--------C--ATGTCCA-------------------------------------CC------------AAA-----CCAA-----CC-AAAT----ACC--A-------------------AAC-C--AAAACCCTATCT----GTAGAACGTCAGTGCGGGCAGCGCTGGACG---------A---GGACGCGGGCGCAGCAGCGGCAG
droMoj3 scaffold_6500:16144009-16144232 - GTAACGTG--GGA-TCG-TCGGCGAA---CCGA---AACGTTATGTGTG---------------------------------------------------------------------TTTGT--GT-------------CTCCATGTCCCCCA-CAAA------------------ACATGAA--CAA-----------------ATGAAACTATC--CAA--TTCTATGTATG-TACATTATTGCTTG-CGACTTC-----CA--------C-------C--TC--C--------CATGTCTC-------------------------------------------------CACCCAA-----CCAA-----CC-AAAT----ACC--AA------------------AAC-C--AAAACCCTATCT----GTAGAACGTCAGTGCGGGCAGCGCTGGACG---------T---GGACACGGGCG---CAGCAGCGG
droGri2 scaffold_15126:610719-611050 + GTAACGTGTGCGAATCCAACAACGAAAAAC-CA---AACGCTCTGTTTG--TGTGCGTGTGTGTCTCTCTCTCTCTC-TCTCTCTATCACTTTCTATCTATATCTCTGTGTGTGTGTGTTTGTCTGTGTGTCACTCTCA-----ATGTT---C-------------------------------A-CAAATTGAAATC----------CAAAAATTC--TAT--ATATATGTACAACATATTATTGCTTG-CGAATTC-----CA-A------AA----CTC--TC--C--------C--ATGTCCACAACCCA--AAAACAAAATCAA----------------------CCACA----A-----CCAA-----CCAAAAT----ACCAAAA------------------AAC-CA-CACACCCTGTATCT--GTAGAACGTCAGTGCGGGCAGCACGGGACG---------TGGAGGACGCGGTCG---CAGCAGCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GTAACGAA--CGA-TCT-ACT------------CCTCCCGTT--GTCTTCCCAC----------------------------------------------------------------------------------CCACT------------TC--AA------------------AACCGATA-CCAATCGTCAA------------AAATAATT--CAA--TTGTTTGTATG-TAAATTATTGCTTGACGTCTTC-----CC-T-TCGTCAC----CCA--TCCTC--------T--ATGCCCA-------------------------------------A-C----CCACATCCAA-----TCCT--AAACA-AAAAAAAAAC-CAAA-------AAAAACG----AACAAAACCAAACCTATCTGT--GCAGAGTGTCAGTGCGGGCAGCGTGGGACG---------TGGCGGACGCCGGCG---CAGCGGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................AAAAC-CAAA-------AAAAACG----AACG.....................................................................................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GCAGAGTGTCAGTGCGGGC...............................................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACG----AACAAAACCAAACCTATCTGT--G.................................................................2911.001010000
................................................................................................................................................................................................................................................................................CAC----CCA--TCCTC--------T--ATGCCCA-------------------------------------A-C----CC...................................................................................................................................................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGACG---------TGGCGGACGCCGGCG---CA.......2511.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACCAAACCTATCTGT--GCAGA.............................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGTGTCAGTGCGGGCAGC............................................2211.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................AAAAC-CAAA-------AAAAACG----AACC.....................................................................................2011.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGTGGGACG---------TGGCGGACG..................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................A-AAAAAAAAAC-CAAA-------AAAAAC..............................................................................................2120.501010000
.....................................................................................................................................................................................................................................................................................................................................................................................AACA-AAAAAAAAAC-CAAA-------AA..................................................................................................20110.182020000
........................................................................................................................................................................................................................................................................................................................................................................................A-AAAAAAAAAC-CAAA-------AAAAA...............................................................................................20200.051010000
droBip1
GTAACGAA--CGA-TCA-ACTC----------TCCTCCCGTT--GTCTTCCCCT----------------------------------------------------------------------------------TCGCC------------------------------------------------TTCGTCTT------------CAATAATT--CAATTGTGTTTGTATG-TAAATTATTGCTTGACG-TGGT-----CA---------CCC--ACC--TCCTT--------T--ATACCCA-------------------------------------CCTCAATCCACATCCAA-----TCCT-----AA-A--AAAAAAC-CAAAAA--CCAAAC-CCGAACAAAC-C---AAAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGTGGGACG---------TGGTGGACGCCGGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
GTAACGAA--CGA-TCA-ACC-----------AACGCCCGTTATGTGTTCCTAC------------------------------CC--------------------------------------------------CCACC------------A-CAAA------------------AACTGAAATCCAATCGACAA----------AAAAATAATC--CAA--TTATATGTATG-TACATTATTGCTTG-GGCCCGC-----CCCC------AA----CCATCTCCTTCTCCTCAAC--CTGTCCA--AACCATC-CACCCCA--------------------ATC----CAA-----AA-----TCCA-----CA-AAAA--A----AAAA------------------AAC-AAAACCAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGGGGACG---------TGGTGGACGCAAGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AACAAA------------------AACTGAAA-CCAATCGACAACAAACAAAAAAAAAATAATC--CTC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-C------AC----CCC--TCCTC--------C--CTGTCCA-------------------------------------CTC----CAACTCCCGAACCCATCCA-----CAAAAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GCAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
droEle1
GTAACGAA--CGA-TCA-ACA---------------CCCGTTACGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AAAAAA------------------AACTGAAA-CCAATCGACAA-----------CAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAC-----CC-C------AC----CCA--TCCTC--------C--CCGTCCA-------------------------------------CTC----CCACACCCAATCCAATCCC-----CA-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GCAGAATGTCAGTGCGGGCACCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------TAAAAA------------------AACTGAAA-CCAATCGACAA-----------AAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAC-----CC-C------AC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACCCCCGA-----TCCA-----CAAAAAC--A--------------------------AAC-AA-AACAACCCATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGACAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTAACGAA--CTA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA---AA-C----------AAAAAAACTGAAA-CCGATCGACAA-----------AAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCGA-----CCCA------CC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CA-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGAAGGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
GTAACGAA--CTA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------CA---AAACCAAAACCAAAAAAAAAACTGAAA-CCGATCGACAA---------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCGA-----CCCA------AC----CCA--TCCTTC-------TACCTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CA-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
droEug1
GTAACGAC--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA-AAA------------------AACTGATA-CCAATCGACAA----------AAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCC------CC-C------AC----CCA--TCCTC--------T--CCGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CA-AAA------------------------------AAC-A--AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAGSizeHit CountTotal NormTotal
No Reads
dm3
GTAACGAA--CGA-TCA-ACG---------------ACCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGACAACAA---AAAAAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-AACCA--AC----CCATATCCTC--------C--CTGTCCG-------------------------------------ATC----CCGCACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGAAG---------TGGTGGACGCAAGCG---CAGCGGCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................AA-AACAACCTATCTGT--GTAGAA............................................................22112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCAGCGGTGGAAG---------TGGTGG.....................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTATCTGT--GTAGAATGTC........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCGGGCAGCGGTGA.......................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGAAG---------TGGTGGA....................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGACGCAAGCG---CAGCGG...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCGGGCAGCGGTGG.......................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000001000000000000000000000000
.........................................................................................................................................CACC------------A---AA------------------AACTGAAA-CCAATCGACAACAA---.........................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TATCTGTATC-TACATTATTGC.............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGTCAGTGCGGGCAGC............................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AA-AACAACCTATCTGT--GTAGA.............................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGCAGCGGTGGAAG---------TGGTG......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAG---------TGGTGGACGCAAG..............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................C--A--------------------------AAC-AA-AACAACCTATCTGT--..................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACGCAAGCG---CAGCG....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGT--GTAGAATGTCAGTG....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAG---------TGGTGGA....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GTAGAATGTCAGTGCGGGC...............................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGCAGCGGTGGAAG---------TGG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTAGAATGTCAGTGCGGGCAGCGGTG........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACGCAAGCG---CAGCGGA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGTGCGGGCAGC............................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGT--GTAGAATGTCAGTGCG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATC-TACATTATTGCTTG-CGCCC....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCAGTGCGGGCAGCGGT.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGCAAGCG---CAGCGG...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGTCAGTGCGGGCAGCG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATCTGT--GTAGAATGTCAGTGCGGGC...............................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AAAAATAATC--CAC--TTATCTGTA...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGAAG---------TGGTGGACGC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GTAGAATGTCAGTGCGGG................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG---------TGGTGGACGCAAGCG---CAG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAG---------TGGTGGACGCAAGCG---CAG......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AACCA--AC----CCATATCCTC--------C--CTGTCCG-------------------------------------A...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGCAGCGGTGGAAG---------T..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GTAGAATGTCAGTGCGGGC...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGTCAGTGCGGGCAGT............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCAGCGGTGGAAG---------TGGTGGA....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCTGT--GTAGAATGTCAGTGCGGG................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACGCAAGCG---CAGCGG...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGT--GTAGAATGTCAGTGCGGGCAGC............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GTAGAATGTCAGTGCGGGCAGC............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTAGAATGTCAGTGCGGGCAGCGG..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................ACTGAAA-CCAATCGACAACAA---AAAA.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGAC.................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAG---------TGGTGGACGCAAGCG---CA.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGCGGGCAGCGGTG........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................ATCCTC--------C--CTGTCCG-------------------------------------ATC----CCGCACCC.............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................A---AA------------------AACTGAAA-CCAATCGACAACA.............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGT--GTAGAATGTCAGTGCGGGG...............................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CACC------------A---AA------------------AACTGAAA-CCA.......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCGGGCAGCGGTGGAAG---------TG.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGCGGGCAGCGGTGGA......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................CCTC--------C--CTGTCCG-------------------------------------ATC----CCGCACCC.............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGTGGAAG---------TGGTGGAC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGCGGGCAGCGGTGGAC.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AAC................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CA-----CC-AAAC--A--------------------------AAC-AA-AACAACC...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGT--GTAGAATGTCAGTGCGGGC...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................A--AC----CCATATCCTC--------C--CTGTCCG-------------------------------------............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AC-AA-AACAACCTATCTGT--GTAGAATGTC........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCAGCGGTGGAAG---------TGGTG......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGT--GTAGAATGTCAGTGCG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................CC------------A---AA------------------AACTGAAA-CCAATCGACA................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTATCTGT--GTAGAATGTCAGTGC...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................AC--TTATCTGTATC-TACATTATTGCTTG-C........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAG---------TGGTGGACGCA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAG---------TGGTGGACGCAT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................A---AA------------------AACTGAAA-CCAATCGACAA...............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCGGGCAGCGGTG........................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AAATAATC--CAC--TTATCTG.............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAG---------TGGTGGAC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................CAA-----CC-AACCA--AC----CCATATCC.....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACGCAAGCG---CAGCGGC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CC------------A---AA------------------AACTGAAA-CCAATCGACAACA.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG---------TGGTGGACGCAAGCG---CAGCGG...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCGGGCAGCGGTGGA......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAG---------TGGTGGACG..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.....................................CCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCAC........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATGTCAGTGCGG.................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ATC----CCGCACCCAA-----TCCA-----CC-AA........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCGGGCAGCGGGTT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGTCAGTGCGGGCAGCGGTG........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATGTCAGTGCGGG................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................AAAAAAATAATC--CAC--TTATCTGTATC-T.......................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTGGAAG---------TGGTGG.....................1960.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000010000
.................................................................................................................................................................................................ACAACAA---AAAAAAAAATA..............................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGTGCGGGCAGCGGGTA.......................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droSim2
GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGACAACAA------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCG-------------------------------------ATC----CCACACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAAGCG---CAGCGGCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GTAGAATGTCAGTGCGGGCAGCGGT.........................................2812.00200000000000020000
GTAACGAA--CGA-TCA-ACA---------------CCCGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---------TGGTGGACGCAAGCG---CAGCGGC..2611.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGT--GTAGAATGTCAGTGCGGGC...............................................2411.00100000000010000000
....................................................................................................................................................................................................................TAATC--CAC--TTATCTGTATC-TACATTATTG..............................................................................................................................................................................................................................................................2911.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGCGGGCAGCGGTGGACG---------TGG........................2611.00101000000000000000
..................................................................................................................................................................................................................................................................................C----CCA--TCCTC--------C--CTGTCCG-------------------------------------ATC----CC...................................................................................................................................................2211.00100100000000000000
GTAACGAA--CGA-TCA-ACA---------------CCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GTAGAATGTCAGTGCGGGCAGCGG..........................................2711.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGT--GTAGAATGTCAGTGCGGGC...............................................2611.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---------TGGTGGACGCAAGCG---C........1811.00100000000000100000
droSec2
GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------A---AA------------------AACTGAAA-CCAATCGACAACA-------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCG-------------------------------------ATC----CTACACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAAGCG---CAGCGGCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---------TGGTGGACGCAAGCG---C........1911.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCAGTGCGGGCAGCGGT.........................................2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGTGCGGGCAGCG...........................................1811.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGACG---------TGGTGGACGC.................2111.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGTGCGGGCAGCGGT.........................................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGTGCGGGCAGCGGTG........................................2111.0010010
............................................................................................................................................................................................................................................TACATTATTGCTTG-CGCCCA...................................................................................................................................................................................................................................................2011.0011000
..AACGAA--CGA-TCA-ACA---------------CCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCAGCGGTGGACG---------TGGTGGA....................2411.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG---------TGGTGGACGCAAGC.............1811.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCAGTGCGGGCAGCGGTGGAC.....................................2511.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACG---------TGGTGGACGCAAGCG---T........2211.0010100
droYak3
GTAACGAA--CGA-TCC-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA---AA------------AAAAAAACTGAAA-CCAATCGACAA---------AAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CC-AAAC--A--------------------------AA--AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCG---CAGCGGCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................A-------------------------------------CTC----CCACACCCAA-----TCCA-----CC-AAAC--....................................................................................................................2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AA-AACAACCTATCTGT--GTAGAATGTC........................................................2611.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGTCAGTGCGGGCAGCGGT.........................................2311.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AA-AACAACCTATCTGT--GTAGAAT...........................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGTGCGGGCAGCGGTGGACG---------TG.........................2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGTCAGTGCGGGCAGCGGT.........................................2211.00100000010000
droEre2
GTAACGAA--CGA-TCA-ACA---------------CCCGTTATGTGTTCCCAC----------------------------------------------------------------------------------CCACC------------AA--AA------------------AACTGAAA-CCAATCGACAAAA----AAAAAAAAATAATC--CAC--TTATCTGTATC-TACATTATTGCTTG-CGCCCAA-----CC-A------AC----CCA--TCCTC--------C--CTGTCCA-------------------------------------CTC----CCACACCCAA-----TCCA-----CC-AAAC--A--------------------------AAC-AA-AACAACCTATCTGT--GTAGAATGTCAGTGCGGGCAGCGGTGGACG---------TGGTGGACGCAGGCA---CAGCGGCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATGTCAGTGCGGGCAGCGGT.........................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGACG---------TGGTGGAC...................1911.0010001000
dp5
GTAACGTA--CGAATCC-ACAACAAAAA--------C------------CCCAC----------------------------------------------------------------------------------CCACA-----ATC---CA-CAAA-------------AAAAAAAC--AAA-CC-----AA-----------AAAAAATTATTAAAAA--TTATATGTATG-TACATTATTGCTTG-CGACCGATCCCCCA-A------AA----CCA--ACCTC------------TGCCCCCATCCCATCCCATCCAAATCCAATATCCTGATTCCTGA----------------------TTCCGAAACA-AAAC--ATA--CAAA------------------AAC-----GAAACCTATCTGTGTATAGAGTGTCAGTGCGGGCAGCGGTGGACG---------TGGAGGACGCGGGCG---CAGCGATGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................A--ACCTC------------TGCCCCCATCCC...........................................................................................................................................................................................1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTATAGAGTGTCAGTGCGGGCAGC............................................2811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................TTCCGAAACA-AAAC--ATA--CAAA------------------AAC-----GA...............................................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................TGATTCCTGA----------------------TTCCGAAACA-AAAC--....................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................CCA--ACCTC------------TGCCCCCATCCCATC........................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACG---------TGGAGGACGCGGGCG---C........2411.0010100000000
.......A--CGAATCC-ACAACAAAAA--------C------------CCCAC----------------------------------------------------------------------------------CC..........................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACG---------TGGAGGACGCGGGCG---.........2211.0010000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCAGCGGTGGACG---------TGGAGGACG..................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACG---------TGGAGGACGCGGGC.............2111.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGACG---------TGGAGGACGC.................1811.0010000000001
...........................................................................................................................................................................................................................................................CGACCGATCCCCCA-A------AA----CCA--ACCTC------------T......................................................................................................................................................................................................2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................AATATCCTGATTCCTGA----------------------TTC..................................................................................................................................2011.0010100000000
....CGTA--CGAATCC-ACAACAAAAA--------C------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACG---------TGGAGGACGCGGG..............2011.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAGAGTGTCAGTGCGGGCAGCG...........................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGACG---------TGGAGGACGC.................2111.0010000000010
.............................................................................................................................................................................AAAAAAC--AAA-CC-----AA-----------AAAAA.................................................................................................................................................................................................................................................................................................1960.1710010000000
droPer2
GTAACGTA--CGAATCC-ACAACAAAAA--------C------------CCCAC----------------------------------------------------------------------------------CCACA-----ATC---CA-CAAA-------------AAA--AAAACAAA-CCAAACCAAA-----------AAAAATTATTAAAAA--TTATATGTATG-TACATTATTGCTTG-CGACCGATCCCCCA-A------AA----CCA--ACCTC------------TGCCCCCATCCCATCCCATCCAAATCCAATATCCTG-------A----------------------TTCCGAAACA-AAAC--ATA--CAAA------------------AAC-----GAAACCTATCTGTGTATAGAGTGTCAGTGCGGGCAGCGGTGGACG---------TGGAGGACGCGGGCG---CAGCGATGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................ACATTATTGCTTG-CGACCGAT.................................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGCGGTGGACG---------TGT........................1820.501000010
droWil2
GTAACGAA--CGA-TCG-AA---------C-CA---ACCGTTATGTGTGT------------GTCTTCCTCCTCCTCCTCTTCCTC--------------------------------------------------CTACC----------CCA---AAAACCAA------------AT-------C---------------------TAAAA---------------ATCTATT-AAAACTATTGCTTG-CGATCCT-----CC-C------CC--ACCTC--TGATT--------C--CTGA--A---ATCCT-----------------------------TTC----CCAAAATCCC-----TTTA-----CG-AAAAAAATA--TAAAAATGCCAAACA----ACAAACCAAAACCAACCTATCTGAATGTAGAATATCAGTGCGGGCAGCGGGGGACGAGTTGGCGGTGGCGGACGTGGACGGAGTAGTGGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAATGTAGAATATCAGT.....................................................1912.00220000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTTGGCGGTGGCGGA....................1811.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGCGGGGGACGAGTTGGCGGT..........................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATATCAGTGCGGGCAGC............................................2211.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGAATATCAGTGCGGGC...............................................2111.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGGGGACGAGTTGGCGGTGGC.......................2611.00100100
.....................................................................................................................................................................................................................................................GCTTG-CGATCCT-----CC-C------CC--ACCT...........................................................................................................................................................................................................................2111.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGACGTGGACGGAGTAGT.....2111.00101000
....CGAA--CGA-TCG-AA---------C-CA---ACCGTTATGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
droVir3
GTAACGTG--CGA-TCA-ACAACGAA---C-TA---AACGTTATGTGTG---------------------------------------------------------------------TTTGT--GT-------------GA-AATGTCCCCCA-CAAA------------------ACATGAA--CAAAT-G---------------AAAAT-ATC--CAA--TTCTATGTATG-TACATTATTGCTTG-CGACTTC-----CA--------A-------C--TC--C--------C--ATGTCCA-------------------------------------CC------------AAA-----CCAA-----CC-AAAT----ACC--A-------------------AAC-C--AAAACCCTATCT----GTAGAACGTCAGTGCGGGCAGCGCTGGACG---------A---GGACGCGGGCGCAGCAGCGGCAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................TG-CGACTTC-----CA--------A-------C--TC--C--------C--ATGT....................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.....GTG--CGA-TCA-ACAACGAA---C-TA---AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GACTTC-----CA--------A-------C--TC--C--------C--ATGTCCA-------------------------------------CC------------AAA-----C.....................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATCT----GTAGAACGTCAGTGCGGGC...............................................2611.001000000000010000000000000000000000000000000000000000000000000000
......TG--CGA-TCA-ACAACGAA---C-TA---AACGTTATGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000000000000100000
..AACGTG--CGA-TCA-ACAACGAA---C-TA---AACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGTCCA-------------------------------------CC------------AAA-----CCAA-----CC-AAAT----..................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AC-C--AAAACCCTATCT----GTAGAACGTCA.......................................................2611.001000000000000000000000000000000000000100000000000000000000000000
........................................TTATGTGTG---------------------------------------------------------------------TTTGT--GT-------------GA-AATG.................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GGACGCGGGCGCAGCAGCGGC..2211.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATCT----GTAGAACGTCAGTGCGGGC...............................................2311.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
GTAACGTG--GGA-TCG-TCGGCGAA---CCGA---AACGTTATGTGTG---------------------------------------------------------------------TTTGT--GT-------------CTCCATGTCCCCCA-CAAA------------------ACATGAA--CAA-----------------ATGAAACTATC--CAA--TTCTATGTATG-TACATTATTGCTTG-CGACTTC-----CA--------C-------C--TC--C--------CATGTCTC-------------------------------------------------CACCCAA-----CCAA-----CC-AAAT----ACC--AA------------------AAC-C--AAAACCCTATCT----GTAGAACGTCAGTGCGGGCAGCGCTGGACG---------T---GGACACGGGCG---CAGCAGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................ATTGCTTG-CGACTTC-----CA--------C-------C--T.......................................................................................................................................................................................................................2011.001100000
.......................GAA---CCGA---AACGTTATGTGTG---------------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTGGACG---------T---GGACACGGGC.............2211.001000100
........................................................................................................................................................................................................................................................................................................................................................................................................A------------------AAC-C--AAAACCCTATCT----GTAG..............................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGACG---------T---GGACACGGGC.............1911.001100000
...........................................................................................................................................................................................AA-----------------ATGAAACTATC--CAA--TTCTATGTAT..........................................................................................................................................................................................................................................................................2611.001100000
droGri2
GTAACGTGTGCGAATCCAACAACGAAAAAC-CA---AACGCTCTGTTTG--TGTGCGTGTGTGTCTCTCTCTCTCTC-TCTCTCTATCACTTTCTATCTATATCTCTGTGTGTGTGTGTTTGTCTGTGTGTCACTCTCA-----ATGTT---C-------------------------------A-CAAATTGAAATC----------CAAAAATTC--TAT--ATATATGTACAACATATTATTGCTTG-CGAATTC-----CA-A------AA----CTC--TC--C--------C--ATGTCCACAACCCA--AAAACAAAATCAA----------------------CCACA----A-----CCAA-----CCAAAAT----ACCAAAA------------------AAC-CA-CACACCCTGTATCT--GTAGAACGTCAGTGCGGGCAGCACGGGACG---------TGGAGGACGCGGTCG---CAGCAGCGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................CAAATTGAAATC----------CAAAAATT............................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/17/2015 at 10:30 PM