ID:

dan_462

 Coordinate:

scaffold_12916:5183-5242 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.1 -8.0 -7.8 -7.8

Flybase annnotation

exon [dana_GLEANR_15715:9]; CDS [Dana\GF14949-cds]; exon [dana_GLEANR_15715:10]; CDS [Dana\GF14949-cds]; intron [Dana\GF14949-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------##################################################
AGTTCTCAGGGATCCAAAATAAGCAGCGTGGACTATGGCCGACAGAAGAAGTAAGTTCCACGGCTTTGGCTAGCTTAAGAGAATATACTCTGATTTGTTTCCGTTTGCAGAGAGCACGATTACCGCAACGATTTGTTGGGCGAAGCCATGAAGGCTGGTA
**************************************************.....((.....((...((..(((...((((......)))).....))).))....))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V106
head
 V055
head
...TCTCAGGGATCCAAAATAAGCAGCGTG.................................................................................................................................. 27 0 1 105.00 105 102 3 0 0 0 0
..TTCTCAGGGATCCAAAATAAGCAGCGTG.................................................................................................................................. 28 0 1 85.00 85 74 10 1 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTAGC...................................................................................... 27 0 1 78.00 78 17 59 2 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAGC............................................. 25 0 1 75.00 75 27 39 6 3 0 0
............................................GAAGAAGTAAGTTCCACGGCTTTGGC.......................................................................................... 26 0 1 59.00 59 42 17 0 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 25 0 1 53.00 53 4 40 8 1 0 0
...TCTCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 26 0 1 50.00 50 29 21 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAAGCC............. 27 0 1 41.00 41 22 19 0 0 0 0
............TCCAAAATAAGCAGCGTGGACTATGGCC........................................................................................................................ 28 0 1 37.00 37 17 18 1 1 0 0
.GTTCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 26 0 1 34.00 34 13 17 3 1 0 0
............................................GAAGAAGTAAGTTCCACGGCTTTGG........................................................................................... 25 0 1 34.00 34 31 2 1 0 0 0
..TTCTCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 27 0 1 30.00 30 15 14 1 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAAGCCA............ 28 0 1 29.00 29 29 0 0 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAGCAC........................................... 27 0 1 27.00 27 9 16 1 1 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTAG....................................................................................... 26 0 1 23.00 23 12 11 0 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTAGCT..................................................................................... 28 0 1 21.00 21 13 8 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCATGAA........ 26 0 1 21.00 21 18 2 1 0 0 0
..TTCTCAGGGATCCAAAATAAGCAGCG.................................................................................................................................... 26 0 1 20.00 20 15 4 1 0 0 0
..TTCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 25 0 1 19.00 19 2 15 2 0 0 0
.GTTCTCAGGGATCCAAAATAAGCAGCG.................................................................................................................................... 27 0 1 19.00 19 19 0 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 24 0 1 18.00 18 4 13 1 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCATGA......... 25 0 1 17.00 17 13 3 1 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCATG.......... 24 0 1 16.00 16 14 1 1 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAAGC.............. 26 0 1 16.00 16 15 0 0 1 0 0
..............................GACTATGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 28 0 1 15.00 15 5 8 1 1 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGC.......................................................................................... 23 0 1 15.00 15 8 7 0 0 0 0
..............................GACTATGGCCGACAGAAGAAGTAAGT........................................................................................................ 26 0 1 14.00 14 11 0 3 0 0 0
........................................GACAGAAGAAGTAAGTTCCACGGC................................................................................................ 24 0 1 13.00 13 3 9 1 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAGCA............................................ 26 0 1 13.00 13 12 1 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCATGAAG....... 27 0 1 12.00 12 9 0 3 0 0 0
.GTTCTCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 28 0 1 11.00 11 8 2 0 1 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAGCACGA......................................... 29 0 1 11.00 11 9 2 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGCGTGG................................................................................................................................. 28 0 1 10.00 10 10 0 0 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAG.............................................. 24 0 1 10.00 10 6 4 0 0 0 0
..........................................................................................TTATTTGTTTCCGTTTGCAGAGAGC............................................. 25 1 1 9.00 9 0 9 0 0 0 0
............TCCAAAATAAGCAGCGTGGACTATGG.......................................................................................................................... 26 0 1 8.00 8 4 0 3 1 0 0
..TTCTCAGGGATCCAAAATAAGCAGCGC................................................................................................................................... 27 1 1 8.00 8 0 8 0 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGTTCCAC................................................................................................... 28 0 1 8.00 8 5 3 0 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTA........................................................................................ 25 0 1 8.00 8 4 4 0 0 0 0
............TCCAAAATAAGCAGCGTGGACTATGGC......................................................................................................................... 27 0 1 7.00 7 4 3 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGCG.................................................................................................................................... 25 0 1 7.00 7 3 4 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGCGC................................................................................................................................... 26 1 1 7.00 7 0 7 0 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAGCACG.......................................... 28 0 1 7.00 7 7 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAAGCCAT........... 29 0 1 6.00 6 5 1 0 0 0 0
........................................GACAGAAGAAGTAAGTTCCACGGCT............................................................................................... 25 0 1 6.00 6 3 3 0 0 0 0
....CTCAGGGATCCAAAATAAGCAGCGTG.................................................................................................................................. 26 0 1 6.00 6 6 0 0 0 0 0
...................TAAGCAGCGTGGACTATGGCCGACA.................................................................................................................... 25 0 1 5.00 5 2 0 2 0 1 0
...TCTCAGGGATCCAAAATAAGCAG...................................................................................................................................... 23 0 1 5.00 5 4 1 0 0 0 0
...............................ACTATGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 27 0 1 5.00 5 2 3 0 0 0 0
................................................AAGTAAGTTCCACGGCTTTGGCTAGCT..................................................................................... 27 0 1 5.00 5 5 0 0 0 0 0
.GTTCTCAGGGATCCAAAATAAGCAGCGTG.................................................................................................................................. 29 0 1 5.00 5 5 0 0 0 0 0
.....................................................................................................................GATTACCGCAACGATTTGTTGGGCG.................. 25 0 1 4.00 4 4 0 0 0 0 0
...............................................GGAGTAAGTTCCACGGCTTTGGCTAG....................................................................................... 26 1 1 4.00 4 0 4 0 0 0 0
..............................GACTATGGCCGACAGAAGAAGTAAG......................................................................................................... 25 0 1 4.00 4 0 1 1 2 0 0
............................................GAAGAAGTAAGTTCCACGGCTTTG............................................................................................ 24 0 1 4.00 4 4 0 0 0 0 0
....................................................................................................................CGATTACCGCAACGATTTGTTGGGC................... 25 0 1 4.00 4 2 1 1 0 0 0
................................................AAGTAAGTTCCACGGCTTTGGCTAGC...................................................................................... 26 0 1 4.00 4 2 2 0 0 0 0
....CTCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0 0
...TCTCAGGGGTCCAAAATAAGCAGCGTG.................................................................................................................................. 27 1 1 4.00 4 4 0 0 0 0 0
............................TGGACTATGGCCGACAGAAGAAGTAAGT........................................................................................................ 28 0 1 4.00 4 3 1 0 0 0 0
.............................................AAGAAGTAAGTTCCACGGCTTTGGC.......................................................................................... 25 0 1 4.00 4 4 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGG.................... 20 0 1 4.00 4 3 1 0 0 0 0
.GTTCTCAGGGATCCAAAATAAGCAG...................................................................................................................................... 25 0 1 4.00 4 3 1 0 0 0 0
.........................................................................................CTGATTTGTTTCCGTTTGCAGAGAGC............................................. 26 0 1 4.00 4 2 2 0 0 0 0
.............................................................................................................................CAACGATTTGTTGGGCGAAGCCATG.......... 25 0 1 4.00 4 3 0 1 0 0 0
............................TGGACTATGGCCGACAGAAGAAGTAAG......................................................................................................... 27 0 1 4.00 4 3 1 0 0 0 0
........................................................TCCACGGCTTTGGCTAGCTTAAGAGA.............................................................................. 26 0 1 4.00 4 4 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAAG............... 25 0 1 4.00 4 3 1 0 0 0 0
...............AAAATAAGCAGCGTGGACTATGGCC........................................................................................................................ 25 0 1 4.00 4 1 3 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCATGAAGGC..... 29 0 1 4.00 4 0 3 0 1 0 0
................................................AAGTAAGTTCCACGGCTTTGGCTAG....................................................................................... 25 0 1 3.00 3 2 1 0 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGT........................................................................................................ 23 0 1 3.00 3 3 0 0 0 0 0
..............CAAAATAAGCAGCGTGGACTATGGCC........................................................................................................................ 26 0 1 3.00 3 1 2 0 0 0 0
.............................................AAGAAGTAAGTTCCACGGCTTTGG........................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0
............................................GAAGAAGTCAGTTCCACGGCTTTGG........................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0
...................TAAGCAGCGTGGACTATGGCC........................................................................................................................ 21 0 1 3.00 3 1 2 0 0 0 0
............................TGGACTATGGCCGACAGAAGAAAGA........................................................................................................... 25 2 1 3.00 3 0 0 2 1 0 0
.....................................................................................................................GATTACCGCAACGATTTGTTGGGCGAA................ 27 0 1 3.00 3 3 0 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCA............ 22 0 1 3.00 3 2 1 0 0 0 0
....CTCAGGGATCCAAAATAAGCAGCGTGG................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0 0
...................................TGGCCGACAGAAGAAGTAAGTTCCACG.................................................................................................. 27 0 1 3.00 3 1 1 1 0 0 0
....................................................................................................................CGATTACCGCAACGATTTGTTGGG.................... 24 0 1 3.00 3 2 1 0 0 0 0
..................................................................................................TTCCGTTTGCAGAGAGCACGATTACCGC.................................. 28 0 1 3.00 3 3 0 0 0 0 0
.................................TGTGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 25 1 1 3.00 3 0 3 0 0 0 0
...................TAAGCAGCGTGGACTATGGCCGAC..................................................................................................................... 24 0 1 3.00 3 2 1 0 0 0 0
..............................................................................................TTGTTTCCGTTTGCAGAGAGCACG.......................................... 24 0 1 3.00 3 0 3 0 0 0 0
..............................................AGAAGTAAGTTCCACGGCTTTGGCTAG....................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0
...................................................................................................................................TTTGTTGGGCGAAGCCATGAAGGCTGG.. 27 0 1 3.00 3 2 1 0 0 0 0
...........................................AGAAGAAGTAAGTTCCACGGCTTTGG........................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCATGAAGG...... 28 0 1 3.00 3 1 2 0 0 0 0
.....................................................................................................................................TGTTGGGCGAAGCCATGAAGGCTGG.. 25 0 1 3.00 3 0 1 2 0 0 0
................................................................TTTGGCTAGCTTAAGAGAATATACTC...................................................................... 26 0 1 3.00 3 2 1 0 0 0 0
............................TGGACTATGGCCGACAGAAGAAAGAG.......................................................................................................... 26 3 1 3.00 3 2 1 0 0 0 0
............................................GAAGAAGTAAGTTCCACGGCTTTGGCTA........................................................................................ 28 0 1 3.00 3 1 2 0 0 0 0
...................TAAGCAGCGTGGACTATGGCCGACAGA.................................................................................................................. 27 0 1 3.00 3 1 1 1 0 0 0
............TCCAAAATAAGCAGCGTGGACTATG........................................................................................................................... 25 0 1 3.00 3 2 1 0 0 0 0
........................................GACAGAAGAAGTAAGTTCCACGGCC............................................................................................... 25 1 1 3.00 3 0 3 0 0 0 0
...........................................................................................GATTTGTTTCCGTTTGCAGAGAGC............................................. 24 0 1 3.00 3 3 0 0 0 0 0
................................................................TTTGGCTAGCTTAAGAGAATATACT....................................................................... 25 0 1 2.00 2 1 1 0 0 0 0
..........................................................................................TTATTTGTTTCCGTTTGCAGAGAGCA............................................ 26 1 1 2.00 2 0 2 0 0 0 0
.................................................................TTGGCTAGCTTAAGAGAATATACTCTGA................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................GATTTGTTTCCGTTTGCAGAGAG.............................................. 23 0 1 2.00 2 2 0 0 0 0 0
...............................................GGAGTAAGTTCCACGGCTTTGGCTAGC...................................................................................... 27 1 1 2.00 2 0 2 0 0 0 0
.................................................................................................................................GATTTGTTGGGCGAAGCCATGAAGGCTGG.. 29 0 1 2.00 2 0 2 0 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGTTCCA.................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................TACCGCAATGATTTGTTGGGCGAAGCC............. 27 1 1 2.00 2 2 0 0 0 0 0
...........................................AGAAGAAGTAAGTTCCACGGCTTTGGC.......................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGG........................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0
..TTCTCATGGATCCAAAATAAGCAGCGT................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0 0
...TCTCTGGGATCCAAAATAAGCAGCGT................................................................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0
..........................................CAGAAGAAGTAAGTTCCACGGCTTTGGC.......................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
...................................................................................................................................TTTGTTGGGCGAAGCCATGAAGGC..... 24 0 1 2.00 2 0 1 0 1 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGAC.............................................. 24 1 1 2.00 2 0 2 0 0 0 0
............................................GAAGAAGTAAGTTCCACGGCTTT............................................................................................. 23 0 1 2.00 2 1 1 0 0 0 0
.........................................ACAGAAGAAGTAAGTTCCACGGCT............................................................................................... 24 0 1 2.00 2 0 1 1 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGTT....................................................................................................... 24 0 1 2.00 2 1 1 0 0 0 0
.........................................................................................................................ACCGCAACGATTTGTTGGGCGAAGCCA............ 27 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................................................ACCGCAACGATTTGTTGGGCGAAGCCAT........... 28 0 1 2.00 2 2 0 0 0 0 0
.GGTCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0
.......................................................................................................................TTACCGCAACGATTTGTTGGGCGAAGCC............. 28 0 1 2.00 2 1 1 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGCTT................................................................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0
.......................................................................................................................TTACCGCAACGATTTGTTGGGCGAAGC.............. 27 0 1 2.00 2 1 0 0 1 0 0
............................................GAAGAATTAAGTTCCACGGCTTTGGC.......................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0
................AAATAAGCAGCGTGGACTATGGCCG....................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.......................................................................................................TTTGCAGAGAGCACGATTACCGC.................................. 23 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAGGCCA............ 28 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGATTTGTGTCCGTTTGCAGAGAGC............................................. 25 1 1 2.00 2 2 0 0 0 0 0
........................................................TCCACGGCTTTGGCTAGCTTAAGA................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................................GCAACGATTTGTTGGGCGAAGCC............. 23 0 1 2.00 2 0 2 0 0 0 0
................................................................................................................................CGATTTGTTGGGCGAAGCCATGAAG....... 25 0 1 2.00 2 0 0 2 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGA................. 23 0 1 2.00 2 1 0 0 1 0 0
..TTCTCAGGGATCCAAAATAAGCAGCGTT.................................................................................................................................. 28 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTATTTGTTTCCGTTTGCAGAGAGCAC........................................... 27 1 1 2.00 2 0 2 0 0 0 0
...................................TGGCCGACAGAAGAAGTAAGTTCCAC................................................................................................... 26 0 1 2.00 2 1 0 1 0 0 0
.................AATAAGCAGCGTGGACTATGGCCG....................................................................................................................... 24 0 1 2.00 2 1 0 0 1 0 0
........GGGATCCAAAATAAGCAGCGTGGAC............................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0
........................................................................................................................TACCGCAAGGATTTGTTGGGCGAAGCCA............ 28 1 1 2.00 2 2 0 0 0 0 0
..........................................................CACGGCTTTGGCTAGCTTAAGAGAATA........................................................................... 27 0 1 2.00 2 1 1 0 0 0 0
..............CAAAATAAGCAGCGTGGACTATGGC......................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0
........................................................TCCACGGCTTTGGCTAGCTTAAGAGAA............................................................................. 27 0 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTTCCACGGCTTTGGCTAGCT..................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0
.................................................................................................................................GATTTGTTGGGCGAAGCCATGAAGGC..... 26 0 1 2.00 2 0 2 0 0 0 0
.................................TACGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
...............................................................................................................................ACGATTTGTTGGGCGAAGCCATGAA........ 25 0 1 2.00 2 2 0 0 0 0 0
..TTCTCAGGGATCCAAAATAAGCAGCGTGG................................................................................................................................. 29 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCG.................. 22 0 1 2.00 2 2 0 0 0 0 0
................................CTATGGCCGACAGAAGAAGTAAGT........................................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0
.......................................CGACAGAAGAAGTAAGTTCCACGGC................................................................................................ 25 0 1 2.00 2 1 1 0 0 0 0
..TGCTCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0 0
.........................................................................................................................ACCGCAACGATTTGTTGGGCGAAGCC............. 26 0 1 2.00 2 2 0 0 0 0 0
...............................................GAAGTAAGATCCACGGCTTTGGCTAGC...................................................................................... 27 1 1 2.00 2 2 0 0 0 0 0
..............................................AGAAGTAAGTTCCACGGCTTTGG........................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGACTTGTTTCCGTTTGCAGAGAGC............................................. 25 1 1 2.00 2 0 2 0 0 0 0
............................................GAAGAAGTAAGTTCCACGGCTTTGGCT......................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGCGTT.................................................................................................................................. 27 1 1 2.00 2 0 2 0 0 0 0
...................................TGGCCGACAGAAGAAGTAAGTTCC..................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0
...............................................................................................................GAGCACGATTACCGCAACGATTTGT........................ 25 0 1 2.00 2 1 1 0 0 0 0
..TGCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
.........GGATCCAAAATAAGCAGCGTGGACC.............................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGGGCGAA................ 24 0 1 1.00 1 0 0 0 1 0 0
...................TAAGCAGCGTGTACTATGGCCGACA.................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTAAC...................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
...TCTCAGGGGTCCAAAATAAGCAGCGT................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGCTTG.................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TCTGATTTGTTTCCGTTTGCAGAGAG.............................................. 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCAGAGA............................................... 23 0 1 1.00 1 1 0 0 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTAGCC..................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
........................................................TCCACGGCTTTGGCTAGCTTA................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
........GTGATCCAAAATAAGCAGCGTGGAC............................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..TTCTCAGGGATCCAAAATAAGC........................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................AACGATTTGTTGGGAGAAGCCATGA......... 25 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................TTGTTGGGCGAAGCCATGAAGGCTGG.. 26 0 1 1.00 1 1 0 0 0 0 0
...............................................GAAGTAAGTTCCCCGGCTTTGGCTAGC...................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................AACGATTTCTTGGGCGAAGCCATGAA........ 26 1 1 1.00 1 1 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTTGGCGAAGCC............. 27 1 1 1.00 1 0 1 0 0 0 0
..................................................GTAAGTTCCACGGCTTTGGCTAGCTC.................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................GATTTGTTTCCGTTTGCAGAGAGCACGAT........................................ 29 0 1 1.00 1 1 0 0 0 0 0
.................................................................TTGGCTAGCTTAAGAGAATATACTCTGAA.................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
...TCTCAGGGATACAAAATAAGCAGCGT................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................TGTTGGGCGAAGCCATGAAGGCTG... 24 0 1 1.00 1 0 1 0 0 0 0
.......AGGGATCCAAAATAAGCAGCGTGG................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................ACGATTTGTTGGGCGAAGCCATGAAGGC..... 28 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................TTGTTGGGCGAAGCCATGAAGGCTT... 25 1 1 1.00 1 0 0 1 0 0 0
.................................................................TTGGCTAGCTTAAGAGAATATACTC...................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...TCTCAGGGATCCAAAATAAGC........................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
.............................................AAGAAGTAAGTTCCACGGCTTTGGCT......................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................................TATGGCCGACAGTTGAAGTAAGTTC...................................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0
..TTCTCAGGTATCCAAAATAAGCAGCGTG.................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
........................................................................................................................CACCGCAACGATTTGTTGGGCGAAGCCA............ 28 1 1 1.00 1 0 0 0 0 0 1
..........................CGTGGACTATGGCCGACAGAAGAA.............................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
...................................................................................TATACTCTGATTTGTTTCCGTTTGCA................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.............................................AAGAAGTACGTTCCACGGCTTTGGC.......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................GCAACGATTTGTTGGGCGAAGCCATGAA........ 28 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTTGGC................... 21 1 1 1.00 1 0 0 1 0 0 0
.......................................................TTCCACGGCTTTGGCTAGCTTAAGAGA.............................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
........GGGTTCCAAAATAAGCAGCGTGGAC............................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
...TCTCATGGATCCAAAATAAGCAGC..................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0
.........GGATCCAAAATAAGCAGCGTGGAC............................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGCTC...................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
...GCTCAGGGATCCAAAATAAGCAGCGTG.................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
.......................................................TTCCACGGCTTTGGCTAGCTTAAGAG............................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................................TATGGCCGACCGAAGAAGTAAGTTCC..................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................TCCGTTTGCAGAGAGCACGATTACC.................................... 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCCCTTA......... 25 2 1 1.00 1 0 0 1 0 0 0
...............................................GAAGTAAGGTCCACGGCTTTGG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....TCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.CTTCTCAGGGATCCAAAATAAGCAGCGTG.................................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................GAGAGCACGATTACCGCAACGATTT.......................... 25 0 1 1.00 1 1 0 0 0 0 0
.GTCCTCAGGGATCCAAAATAAGCAGCG.................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
..............................GGCTATGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
..................................ATGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................CCAGAGAGTACGGTTACCGCAACGAT............................ 26 3 1 1.00 1 1 0 0 0 0 0
................................................................................................GTTTCCGTTTGCAGATAGCAC........................................... 21 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................TGCAGAGAGCACGATTACCGCAACG.............................. 25 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................TACCGCACCGATTTGTTGGGCGA................. 23 1 1 1.00 1 0 1 0 0 0 0
...................................TTGCCGACAGAAGAAGTAAGTTCC..................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
...............................................GAAGTACGTTCCACGGCTTTGGCTAGC...................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0
...............................................TAAGTAAGTTCCACGGCTTTGGCTAGC...................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAGTTCCACGGCTTTGGCTAGC...................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
..............CAAAATAAGCAGCGTGGACTAT............................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0
...........................................AGAAGAAGGAAGTTCCACGGCTTTGGC.......................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................TTTGCAGAGAGCACGATTACCGCAACGAT............................ 29 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................ACGATTTGTTGGGCGAAGC.............. 19 0 1 1.00 1 0 1 0 0 0 0
...............................................GAAGTAAGGTCCACGGCTTTGGCTAGCT..................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................AGAGCACGATTACCGCAACGATTTGTTG...................... 28 0 1 1.00 1 1 0 0 0 0 0
...............................................GAATTAAGTTCCACGGCTTTGTCTAGC...................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TTACCGCAACGATTTGTTGGGCGA................. 24 0 1 1.00 1 1 0 0 0 0 0
............................................GTAGAAGTAAGTTCCACGGCTTTGGT.......................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
........................................................................................................................TACCGCAAGGATTTGTTGGGCGAAGCC............. 27 1 1 1.00 1 1 0 0 0 0 0
..............................GACTATGGGCGACAGAAGAAGTAAGT........................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
.....................AGCAGCGTGGACTATGGCCGACAGAA................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................AAAGAGCACGATTACCGCAACGATT........................... 25 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................CAACGATTTGTTGGGCGAAGCCATGA......... 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGATTTGTTTCCGTTTTCACAGAAC............................................. 25 3 1 1.00 1 0 0 1 0 0 0
.................................................................TTGGCTAGCTTAAGAGAATATACTCC..................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
...................................TGGCCGACAGAAGAAGTAAGTTCCACGG................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
.....................AGCAGCGTAGACTATGGCCGACAGA.................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
....................AAGCAGCGTGGACTATGGCCGACA.................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................TCCGTTTGCAGAGAGCACGATTACCGC.................................. 27 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................GAGAGCACGATTACCGCAACGATTTGT........................ 27 0 1 1.00 1 1 0 0 0 0 0
..............................GACTATGGCCGACAGAAGAAGTAAGTT....................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................CAGAGAGCACGATTACCGCAACG.............................. 23 0 1 1.00 1 1 0 0 0 0 0
..........GATCCAAAATAAGCAGCGTGGACTATG........................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...............................................GAAGTAAGTTCAACGGCTTTGGCTAGC...................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
...............................................GGAGTAAGTTCCACGGCTTTGGCTAGCT..................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
....................AAGCAGCGGGGACTATGGCCGACAGAA................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
.........GGATCCAAAATAAGCAGCGTGGACTA............................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..TTATCAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................GATTTGTTTCCGTTTGCAGAGAGCACGA......................................... 28 0 1 1.00 1 1 0 0 0 0 0
...TCTCAGGGATCCAAAATAAGCAGG..................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................TGTTGGGCGAAGCCATGAAGGCTT... 24 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGATTTGTCTCCGTTTGCAGAGAGC............................................. 25 1 1 1.00 1 1 0 0 0 0 0
.................................TATGGCCGACAGAAGAAGTAAGTTCCACG.................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
.................................TATGGCCGACAGAACAAGTAAGTTC...................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
........................................GACTGAAGAAGTAAGTTCCACGGCT............................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.......................................CGACAGAAGAAGTAAGTTCCACGG................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...................................................TAAGTTCCACGGCTTTGGCTAGCTTC................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
........................................GACAGAAGAAGTAAGTTCCACAGC................................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0
...............................................TAAGTAAGTTCCACGGCTTTGGC.......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GATTTGTTGCCGTTTGCAGAGTGCACG.......................................... 27 2 1 1.00 1 1 0 0 0 0 0
................................................................................................................................CGATTTGTTGGGCGAAGCCATGAAGG...... 26 0 1 1.00 1 1 0 0 0 0 0
..............................GACGATGGCCGACAGAAGAAGTAAGT........................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................GATTACCGCAACGATTTGTTGGG.................... 23 0 1 1.00 1 0 1 0 0 0 0
...TCTTAGGGATCCAAAATAAGCAGC..................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................CAACGATTTGTTGGGCAAAGCCATGAAG....... 28 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TGTTTCCGTTTGCAGAGAGCACGAT........................................ 25 0 1 1.00 1 1 0 0 0 0 0
..............................GACTATGGCCGACAGAAGAAGTAAGTTT...................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGATTTGTTTCCGTTTGCGGAGAG.............................................. 24 1 1 1.00 1 1 0 0 0 0 0
...TCTCAGGGATCCAAAATAAGCGGCGTG.................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
.......................CAGCGTGGACTATGGCCGACAGAAGA............................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................ATCTATGGCCGACAGAAGAAGTAAGTTC...................................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0
............GCCAAAATAAGCAGCGTGGACTAC............................................................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0
....................................GTCCGACAGAAGAAGTAAGTTCCACGG................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0
.GTTCTCAGGGCTCCAAAATAAGCAGCGT................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTTGC...................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................................TACTGCAACGATTTGTTGGGCGAAGCC............. 27 1 1 1.00 1 0 1 0 0 0 0
...............................................GAAGTAAGTTCCACGGCTTTGGCTAGCTT.................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................TGTTGGGCGAAGCCATGAAGGC..... 22 0 1 1.00 1 0 1 0 0 0 0
...........ATCCAAAATAAGCAGCGTGGACTATGGCC........................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................ACGATTTGATGGGCGAAGCCATGAAG....... 26 1 1 1.00 1 1 0 0 0 0 0
............................TGGACTATGGCCGACAGAAGAAGT............................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
.................................TATGGCCGGCAGAAGAAGTAAGTTCCAC................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0
..TTCACAGGGATCCAAAATAAGCAGCGT................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
......................................................................................................................ATTACCGCAACGATTTGTTGGGCGAAG............... 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................GATTTGTTTCCGTTTGCAGAGAGCAC........................................... 26 0 1 1.00 1 1 0 0 0 0 0
...........................GTGGACTATGGCCGACAGAAGAAGT............................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................ACCGCAACGATTTGTTGGGCGAAG............... 24 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................TACGATTTGTTGGGCGAAGCCATGAAG....... 27 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................ACGATTACCGCAACGATTTGTTGGGC................... 26 0 1 1.00 1 1 0 0 0 0 0
................................................................TTTGGCTAGCTTAAGAGAATAT.......................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCGAAGCC............. 21 0 1 1.00 1 0 1 0 0 0 0
...................TGAGCAGCGTGGACTATGGCCGACA.................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................AACGATTTGTTGGGCAAA................ 18 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................TTGTTGGGCGAAGCCATGAAGGCT.... 24 0 1 1.00 1 0 1 0 0 0 0
.CTTCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
.....................AGCAGCGTGGACTATGGCCGACAG................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
AGTTCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.................................................................TGGGCTAGCTTAAGAGAATATACT....................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.................................TATGGCCGACCGAAGAAGTAAGTTC...................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
........................................................................................................................TACCGCAACGATTTGTTGG..................... 19 0 1 1.00 1 1 0 0 0 0 0
ATTTCTCAGGGATCCAAAATAAGCAGC..................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0

Anti-sense strand reads

TCAAGAGTCCCTAGGTTTTATTCGTCGCACCTGATACCGGCTGTCTTCTTCATTCAAGGTGCCGAAACCGATCGAATTCTCTTATATGAGACTAAACAAAGGCAAACGTCTCTCGTGCTAATGGCGTTGCTAAACAACCCGCTTCGGTACTTCCGACCAT
**************************************************.....((.....((...((..(((...((((......)))).....))).))....))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
 V106
head
.................................................................................................................CGTGCTAATGGCGTTGCTAAACA........................ 23 0 1 7.00 7 5 2 0 0 0 0
...............................TGATACCGGCTGTCTTCTTCATT.......................................................................................................... 23 0 1 6.00 6 5 1 0 0 0 0
.........................CGCACCTGATACCGGCTGTCTTCTTCAT........................................................................................................... 28 0 1 4.00 4 4 0 0 0 0 0
..............................CTGATACCGGCTGTCTTCTTCATT.......................................................................................................... 24 0 1 4.00 4 4 0 0 0 0 0
..............................CTGATACCGGCTGTCTTCTTCATTCAA....................................................................................................... 27 0 1 4.00 4 4 0 0 0 0 0
................................GATACCGGCTGTCTTCTTCATT.......................................................................................................... 22 0 1 4.00 4 4 0 0 0 0 0
.............................................TTCTTCATTCAAGGTGCCGAAACCGAT........................................................................................ 27 0 1 3.00 3 1 2 0 0 0 0
..............................................................................................................TCTCGTGCTAATGGCGTTGCTAAACA........................ 26 0 1 3.00 3 2 1 0 0 0 0
..................................TACCGGCTGTCTTCTTCATTCAA....................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
.........................CGCACCTGATACCGGCTGTCTTCTTCA............................................................................................................ 27 0 1 3.00 3 3 0 0 0 0 0
................................................................................................................TCGTGCTAATGGCGTTGCTAAACAAC...................... 26 0 1 2.00 2 1 1 0 0 0 0
........................................................................CGAATTCTCTTATATGAGACTAAACAAA............................................................ 28 0 1 2.00 2 0 2 0 0 0 0
.............................CCTGATACCGGCTGTCTTCTTCATT.......................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.....................................CGGCTGTCTTCTTCATTCAAGGT.................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0
.........................CGCACCTGATACCGGCTGTCTTCTTCATT.......................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0
..............................................................................CTCTTATATGAGACTAAACAAA............................................................ 22 0 1 2.00 2 0 2 0 0 0 0
..........................................................................................................................GGCGTTGCTAAACAACCCGCTTCGGT............ 26 0 1 2.00 2 2 0 0 0 0 0
...............................................................................................................CTCGTGCTAATGGCGTTGCTAAACAAC...................... 27 0 1 2.00 2 2 0 0 0 0 0
...................................ACCGGCTGTCTTCTTCATTCAA....................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0
..............................................TCTTCATTCAAGGTGCCGAAACCGAT........................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0
......................CGTCGCACCTGATACCGGCTGTCTT................................................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0
.............................CCTGATACCGGCTGTCTTCTTC............................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0
................................................................................CTTATATGAGACTAAACAAAGGCAAAC..................................................... 27 0 1 2.00 2 0 2 0 0 0 0
..............................................................................CTCTTATATGAGACTAAACAAAGGCAA....................................................... 27 0 1 2.00 2 0 2 0 0 0 0
...........................................................................................................GTCTCTCGTGCTAATGGCGTTGC.............................. 23 0 1 2.00 2 1 0 0 1 0 0
.................................................................................................................CGTGCTAATGGCGTTGCTAAACAAC...................... 25 0 1 2.00 2 1 0 1 0 0 0
.............................CCTGATACCGGCTGTCTTCTTCATTCAA....................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..................................TACCGGCTGTCTTCTTCATTCTA....................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..............................CTGATACCGGCTGTCTTCTTCATTCAAG...................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.................................................TCATTCAAGGTGCCGAAACCGAT........................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
....................................................TTCAAGGTGCCGAAACCGAT........................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
.........................CGCACCTGATACCGGCTGTCTTCTTC............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................GGCAAACGTCTCTCGTGCTA........................................ 20 0 1 1.00 1 1 0 0 0 0 0
...............................TGATACCGGCTGTCTTCTTCATTCAA....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................TTATTCGTCGCACCTGATACCGGCTGT.................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.................................................TCATTCAAGGTGCCGAAACCGATCTA..................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................GGCAAACGTCTCTCGTGCTAAT...................................... 22 0 1 1.00 1 1 0 0 0 0 0
..................................................................................TATATGAGACTAAACAAAGGCAAA...................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.........................................................GGTGCCGAAACCGATCGAATTCT................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
.................................TTACCGGCTGTCTTCTTCATTCAA....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................CCTCGTGCTAATGGCGTTGCTAA........................... 23 1 1 1.00 1 0 1 0 0 0 0
...............TTTTATTCGTCGCACCTGATACCG......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
............................ACCTGATACCGGCTGTCTTCTTCA............................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................TCTCTCGTGCTAATGGCGTTGCTAAA.......................... 26 0 1 1.00 1 1 0 0 0 0 0
..............GTTTTATTCGTCGCACCTGATACCGGCT...................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
...................................ACCGGCTGTCTTCTTCATTCAAGTT.................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.................................................................................TTATATGAGACTAAACAAAGGCAAACTT................................................... 28 1 1 1.00 1 0 1 0 0 0 0
..................................................CATTCAAGGTGCCGAAACCGATCGAAT................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................TGCTAAACAACCCGCTTCGGT............ 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................CTAAACAAAGGCAAACGTCTCTCG............................................. 24 0 1 1.00 1 0 1 0 0 0 0
.................................................................................TTATATGAGACTAAACAAAGGCAA....................................................... 24 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................GTCTCTCGTGCTAATGGCGTTG............................... 22 0 1 1.00 1 1 0 0 0 0 0
................................GATACCGGCTGTCTTCTTCATTCAA....................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
........................TCGCACCTGATACCGGCTGTCTTCTT.............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.......................GTCGCACCTGATACCGGCTGTCTTCTTC............................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................GTCTCTCGTGCTAAGGGCGTTGC.............................. 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................CCGATCGAATTCTCTTATATGAGACTAAA................................................................ 29 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................TCTCGTGCTAATGGCGTGGCTAAACA........................ 26 1 1 1.00 1 1 0 0 0 0 0
..............................CTGATACCGGCTGTCTTCTTCA............................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
.....................................................CCAAGGTGCCGAAACCGATCGAAT................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
......................CGTCGCACCTGATACCGGCTGTCT.................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...........................................TCTTCTTCATTCAAGGTGCCGA............................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
....................................CCGGCTGTCTTCTTCATTCAAG...................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................CCTGATACCGGCTGTCTTCTTCAGT.......................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................................CGTGCTAATGGCGTTGCTAAAC......................... 22 0 1 1.00 1 1 0 0 0 0 0
..............................................TCTTCATTCAAGGTGCCGAAACCGATCG...................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..............................................................................CTCGTATATGAGACTAAACAAAGGCAA....................................................... 27 1 1 1.00 1 0 1 0 0 0 0
.............GGTTTTATTCGTCGCACC................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
................................................................................CTTATATGAGACTAAACAAAGGCAAACGT................................................... 29 0 1 1.00 1 0 1 0 0 0 0
....................................................................................TATGAGACTAAACAAAGGCAAACGT................................................... 25 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................GCGTTGCTAAACAACCCGCTTCGGTAC.......... 27 0 1 1.00 1 1 0 0 0 0 0
................................................................................CTTATATGAGACTAAACA.............................................................. 18 0 1 1.00 1 0 1 0 0 0 0
................................GATACCGGCTGTCTTCTTCATTCAAGGT.................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................CGTCTCTCGTGCTAATGGCGTTGC.............................. 24 0 1 1.00 1 1 0 0 0 0 0
.....................................................TCAAGGTGCCGAAACCGATCGAATT.................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
.............GGTTTTATTCGTCGCACCTGATACC.......................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..................................TACCGGCTGTCTTATTCATTCA........................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................CTCGTGCTAATGGCGTTGCTAAACA........................ 25 0 1 1.00 1 1 0 0 0 0 0
...............................................CTTCATTCAAGGTGCCGAAACCGAT........................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................GCGTTGCTAAACAACCCGCTTCGGT............ 25 0 1 1.00 1 1 0 0 0 0 0
..............................CTGATACCGGCTGTCTTCTTCATTCA........................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
........................TCGCACCTGATACCGGCTGTCTTCT............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.CAAGAGTCCCTAGGTTTTATTCG........................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................ACGTCTCTCGTGCTAATGGCGTTGCT............................. 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................CTCTCGTGCTAATGGCGTTGCTAAACAA....................... 28 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................CGTCTCTCGTGCTAATGGCGTTG............................... 23 0 1 1.00 1 1 0 0 0 0 0
............................ACCTGATACCGGCTGTCTTCTTCATTCAA....................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
...............................................CTTCATTCAAGGTGCCGAAACCGA......................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
......................CGTCGCACCTGATACCGGCTGT.................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................CTCTCGTGCTAATGGCGTTGCTAAACA........................ 27 0 1 1.00 1 0 1 0 0 0 0
.........................CGCACCTGATACCGGCTGTCTTCTT.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.................................ATACCTGCTGTCTTCTTCATTCAA....................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................CTCGTTGCTAAACAACCCGCTTCGGT............ 26 2 1 1.00 1 0 0 1 0 0 0
...................................................................................................AGGCAAACGTCTCTCGTGCTAATGGCGT................................. 28 0 1 1.00 1 1 0 0 0 0 0
...............................TGATACCGGCTGTCTTCATCATTCAA....................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...........TAGGTTTTATTCGTCGCA................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
..............................................CCTTCATTCAAGGTGCCGAAACCGAT........................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
.................................ATACCGGCTGTCTTCTTCATTCAA....................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................GTCTCTCGTGCTAATGGCGTTGCT............................. 24 0 1 1.00 1 1 0 0 0 0 0
..........................GCACCTGATACCGGCTGTCTTCTTC............................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0
................................GATACCGGCTGTCTTTTTCATTCA........................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................CGTGCTAATGGCGTCGCTAAACA........................ 23 1 1 1.00 1 1 0 0 0 0 0
...........................CACCTGATACCGGCTGTCTTCTTC............................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0
................................................................................CTTATATGAGACTAAACAAAGGCAAA...................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.............................................................CCGAAACCGACAGAATTCTCTC............................................................................. 22 3 2 0.50 1 0 0 0 0 1 0
.............................................TTCTTCATTCGCGGTGACGAA.............................................................................................. 21 3 2 0.50 1 0 0 0 0 1 0
............................................................CCCTAAACCGATCGAATTCTCT.............................................................................. 22 2 2 0.50 1 0 0 1 0 0 0
...............................................................TAAACCGATGGAATTCTCTTA............................................................................ 21 2 3 0.33 1 0 0 0 0 1 0
..............................................................CTAAACCGATGGAATTCTCT.............................................................................. 20 2 4 0.25 1 0 0 0 0 1 0
.............................................................CGGAAACCGATGGAATTC................................................................................. 18 2 6 0.17 1 0 0 0 0 1 0
..................................................................ACCGAGGGAATTCTCTTA............................................................................ 18 2 10 0.10 1 0 0 0 0 1 0
.....................................................TCAAGGGGCCCAAACGGAT........................................................................................ 19 3 11 0.09 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12916:5133-5292 - dan_462 AGTTCTCAGGGATCCAAAATAAGCAGCGTGGACTATGGCCGACAGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAGAATAT------------------------ACTCT---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCACGATTACCGCAACGATTTGTTGGGCGAAGCCATGAAGGCTGGTA
droBip1 scf7180000392937:57743-57904 - AGTTCTCAGGGATCCAAAATAAGCAGTGTGGACTATGGCCGACAAAAGAAGTAAGTTCCA-------CGGC--------G--ATTTCCATC------------------------------------------TTTAAGAGATTCT------------------------ATCCT---TACTCT-TT---T---T--TCT-TTTCCAGGGAGCATGATTACCGCAATGATTTGTTGGGTGAGGCCATGAAGGCTGGTA
droKik1 scf7180000302468:434402-434560 - AGCTCTCAGGGATCTAAAATAAGCAGTGTCGACTATGGCAGGCAGAAGAAGTGAGAGAGA-AT--TAAGCTCGTCTACTA--------AACA---------------------------------------------------TTG--------------------------GCT---GA-CACT-TGTGG---T--TTC-TTTTCAGGGAGCACGACTACCGCAATGACTTGCTGGGCGAAGCCATGAAGGCTGGTA
droFic1 scf7180000453815:54896-55051 + AGCTCCCAGGGATCCAAAATAAGTAGTGTTGACTATGGCAGACAGAAAAAGTAAACCTCT----------------ACCA--------AATATTTA--------AA-G-AAACGG-------------------------------------------------------TTACT---AA-TCCT-T---T---T-GCTC-TTTTCAGGGAGCACGACTATCGCAATGACTTGCTGGGCGAGGCCATGAAGGCGGGCA
droEle1 scf7180000490640:401749-401914 + AGCTCCCAAGGATCCAAAATAAGCAGTGTCGACTACGGCAGGCAGAAGAAGTGAGCATAA-------CCC-----CACGTGGTATTT----ATTCAATA------ATGT-------------------------------------------------------------TTGCT---GA-CACT-T---TGTTGTGTGC-CTTTCAGGGAGCACGACTACCGCAACGACTTGCTGGGCGAGGCCATGAAGGCGGGCA
droBia1 scf7180000302422:2488449-2488617 + AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAAAAGTGGGCATTG-------AACTAACTTACTT-ATATTG----ATTTAGGA------T--TGT-----------------------------------------------------------ATAAT---CA-TTTT-C---TGTTT-TTAC-TTTCTAGGGAGCACGACTATCGCAATGACTTACTCGGCGAGGCCATGAAAGCAGGCA
droTak1 scf7180000415399:1449671-1449826 + AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTATGGCAGGCAGAAAAAGTGAGTATTA-----------------CT--------TTTAATTTG--------GGAATGT-----------------------------------------------------------ATAAT---AA-CCCT-T---TTTCT--TGTTTTTCCAGGGAGCACGACTATCGCAATGATTTGCTGGGCGAGGCTATGAAAGCGGGCA
droEug1 scf7180000409463:45384-45546 - AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGGATTT-ATCT------AATATAAC--------TATAT---G-TA---TGAATGT-------------------------------------------------------------TTATTAATAA-TTT---AT-----G--TCC-TTTTCAGAGAACACGACTATCGCAATGACTTGCTGGGCGAGGCCATGAAGGCGGGCA
dm3 chr2L:6729454-6729619 + AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGCACTTTATAT------ACAATACC--------AACAATTTG--------AATGTGTATGA--------------------------------TTACCATTTCAT-----------------------------------T--TAT-TAACCAGGGAGCATGATTACCGCAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCA
droSim2 2l:6502920-6503085 + AGCTCCCAGGGATCCAAAATAAGCAGCGTTGATTACGGCAGGCAGAAGAAGTGAGCACATTATAT------ACAATACC--------CACAATTTG--------AATGTGTATGA--------------------------------TTACCATTTCAT-----------------------------------T--TAT-TTACCAGGGAGCATGATTACCGCAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCA
droSec2 scaffold_3:2268145-2268310 + AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGCACATTATAT------ACAATACC--------CACAATTTG--------AATGTGTATGA--------------------------------TTTCCATTTCAT-----------------------------------T--TAC-TTACCAGGGAGCATGATTACCGCAATGACTTACTGGGGGAGGCCATGAAGGCGGGCA
droYak3 2L:6182319-6182481 - AGCTCCCAGGGATCCAAAATCAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGCACTTTACAT------ATA--ACC--------CACAATTCG--------AA-GTGTATGA--------------------------------CTACCAATTTAT-----------------------------------T--TAC-TTACCAGGGAGCATGACTACCGCAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCA
droEre2 scaffold_4929:15645918-15646080 + AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAAAAGAAGTGAGCACTTTACAT------ATG--ACC--------CACAATTCA---------GTGTGTATGA--------------------------------TTACCATTTCAT-----------------------------------T--TAC-TTACCAGGGAGCATGACTACCGCAATGACTTACTAGGGGAGGCCATGAAGGCAGGCA
dp5 4_group1:3828718-3828874 + AGTGCGCAGGGATCAAAGATCAGCAGCGTGGACTACGGAAGGCAGAAAAAGTAAGGACTA-------CAAC--------A-----------AT--------------------------------------TGTTGAAGATCTTTGC-----------------------ATAAT---AA-TCC-TG---T---T--TCT-TTCACAGAGAGCACGACTATCGCAACGATTTGTTGGGTGAGGCCATGAAGGCGGGCA
droPer2 scaffold_5:1441330-1441486 - AGTGCGCAGGGATCAAAGATCAGCAGCGTCGACTACGGCAGGCAGAAAAAGTAAGGACTA-------CAAC--------A-----------AT--------------------------------------TGTTGAAGATCTTTGC-----------------------ATAAT---AA-TCC-CG---T---T--TCT-TTCGCAGAGAGCACGACTATCGCAACGATTTGTTGGGTGAGGCCATGAAGGCGGGCA
droWil2 scf2_1100000004585:7339465-7339631 + dwi_1729 AGTGCTCAGGGTTCTAAGATAAGCAGCGTCGACTATGGCAGGCAAAAGAAGTGAGTTGAA----------------AATG--------GAGAT---GGAAAA--TG-G-AAATGGTTTAGACTAACTCAACTGCTTATA-----------------------------------------------------------TT-CTTTCAGAGAACATGACTATCGCAATGATTTGCTGGGAGAAGCCATGAAGGCGGGCA
droVir3 scaffold_12963:3351552-3351710 - AGCGCACCGGGCTCCAAGATCAGCAGCGTTGACTACGGCAGGCAAAAGAAGTGAGTGTGG---------------------------------------------------------------------------------------ATCCCATTTAATTTGTTTAGCCTTTAATACCAA-TAA---AT-----A--TTC-ACGGCAGGGATCACGATTATCGCAACGATCTGCTCGGCGAGGCGATGAAAGCGGGCA
droMoj3 scaffold_6500:13723785-13723945 - AGCGCGCCAGGCTCGAAGATCAGCAGCGTCGACTATGGCAGGCAAAAGAAGTGAGTGCCG-------AA--------------AGTG----ATTCAGGA------ATATGGATGA--------------------------------TTCC-------------------TTACT---AA-CTA---AT-----A--TGT-CTTGCAGAGATCACGATTACCGCAACGATCTACTGGGCGAGGCCATGAAAGCGGGCA
droGri2 scaffold_15252:2923319-2923476 - AGCGCACAGGGCTCCAAGATCAGCAGCGTTGACTACGGCAGGCAGAAGAAGTATTATTATTGTGC------AAA--ATA--------CAAAATTAG--------AA-AT-------------------------------------------------------------CTATT---AA-CGA---AT-----T-AATC-TCCGCAGAGAACACGATTATCGCAACGATCTGCTGGGCGAGGCCATGAAAGCGGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGTTCTCAGGGATCCAAAATAAGCAGCGTGGACTATGGCCGACAGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAGAATAT------------------------ACTCT---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCACGATTACCGCAACGATTTGTTGGGCGAAGCCATGAAGGCTGGTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...TCTCAGGGATCCAAAATAAGCAGCGTG....................................................................................................................................................................................................................................271105.0010510230000
..TTCTCAGGGATCCAAAATAAGCAGCGTG....................................................................................................................................................................................................................................28185.008574101000
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGC....................................................................................................................................27178.007817592000
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGC.............................................25175.007527396030
............................................GAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGC........................................................................................................................................26159.005942170000
.................................TATGGCCGACAGAAGAAGTAAGTTC........................................................................................................................................................................................................25153.00534408010
...TCTCAGGGATCCAAAATAAGCAGCGT.....................................................................................................................................................................................................................................26150.005029210000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGAAGCC.............27141.004122190000
............TCCAAAATAAGCAGCGTGGACTATGGCC..........................................................................................................................................................................................................................28137.003717181010
.GTTCTCAGGGATCCAAAATAAGCAGC.......................................................................................................................................................................................................................................26134.003413173010
............................................GAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGG.........................................................................................................................................25134.00343121000
..TTCTCAGGGATCCAAAATAAGCAGCGT.....................................................................................................................................................................................................................................27130.003015141000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGAAGCCA............28129.00292900000
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCAC...........................................27127.00279161010
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAG.....................................................................................................................................26123.002312110000
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCT...................................................................................................................................28121.00211380000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCATGAA........26121.00211821000
..TTCTCAGGGATCCAAAATAAGCAGCG......................................................................................................................................................................................................................................26120.00201541000
..TTCTCAGGGATCCAAAATAAGCAGC.......................................................................................................................................................................................................................................25119.00192152000
.GTTCTCAGGGATCCAAAATAAGCAGCG......................................................................................................................................................................................................................................27119.00191900000
...TCTCAGGGATCCAAAATAAGCAGC.......................................................................................................................................................................................................................................24118.00184131000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCATGA.........25117.00171331000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCATG..........24116.00161411000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGAAGC..............26116.00161500010
..............................GACTATGGCCGACAGAAGAAGTAAGTTC........................................................................................................................................................................................................28115.0015581010
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGC........................................................................................................................................23115.0015870000
..............................GACTATGGCCGACAGAAGAAGTAAGT..........................................................................................................................................................................................................26114.00141103000
........................................GACAGAAGAAGTAAGTTCCA-------CGGC--------...................................................................................................................................................................................24113.0013391000
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCA............................................26113.00131210000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCATGAAG.......27112.0012903000
.GTTCTCAGGGATCCAAAATAAGCAGCGT.....................................................................................................................................................................................................................................28111.0011820010
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCACGA.........................................29111.0011920000
...TCTCAGGGATCCAAAATAAGCAGCGTGG...................................................................................................................................................................................................................................28110.00101000000
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAG..............................................24110.0010640000
............TCCAAAATAAGCAGCGTGGACTATGG............................................................................................................................................................................................................................2618.008403010
..TTCTCAGGGATCCAAAATAAGCAGCGC.....................................................................................................................................................................................................................................2718.008080000
.................................TATGGCCGACAGAAGAAGTAAGTTCCA-------C..............................................................................................................................................................................................2818.008530000
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTA......................................................................................................................................2518.008440000
............TCCAAAATAAGCAGCGTGGACTATGGC...........................................................................................................................................................................................................................2717.007430000
...TCTCAGGGATCCAAAATAAGCAGCG......................................................................................................................................................................................................................................2517.007340000
...TCTCAGGGATCCAAAATAAGCAGCGC.....................................................................................................................................................................................................................................2617.007070000
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCACG..........................................2817.007700000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGAAGCCAT...........2916.006510000
........................................GACAGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------.............................................................................................................................................2516.006330000
....CTCAGGGATCCAAAATAAGCAGCGTG....................................................................................................................................................................................................................................2616.006600000
...................TAAGCAGCGTGGACTATGGCCGACA......................................................................................................................................................................................................................2515.005202001
...TCTCAGGGATCCAAAATAAGCAG........................................................................................................................................................................................................................................2315.005410000
...............................ACTATGGCCGACAGAAGAAGTAAGTTC........................................................................................................................................................................................................2715.005230000
................................................AAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCT...................................................................................................................................2715.005500000
.GTTCTCAGGGATCCAAAATAAGCAGCGTG....................................................................................................................................................................................................................................2915.005500000
.......................................................................................................................................................................................................................GATTACCGCAACGATTTGTTGGGCG..................2514.004400000
..............................GACTATGGCCGACAGAAGAAGTAAG...........................................................................................................................................................................................................2514.004011020
............................................GAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTG..........................................................................................................................................2414.004400000
......................................................................................................................................................................................................................CGATTACCGCAACGATTTGTTGGGC...................2514.004211000
................................................AAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGC....................................................................................................................................2614.004220000
....CTCAGGGATCCAAAATAAGCAGCGT.....................................................................................................................................................................................................................................2514.004400000
............................TGGACTATGGCCGACAGAAGAAGTAAGT..........................................................................................................................................................................................................2814.004310000
.............................................AAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGC........................................................................................................................................2514.004400000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGG....................2014.004310000
.GTTCTCAGGGATCCAAAATAAGCAG........................................................................................................................................................................................................................................2514.004310000
.............................................................................................................................................................................CT---GA-TTT-GT---T---T--CCG-TTTGCAGAGAGC.............................................2614.004220000
...............................................................................................................................................................................................................................CAACGATTTGTTGGGCGAAGCCATG..........2514.004301000
............................TGGACTATGGCCGACAGAAGAAGTAAG...........................................................................................................................................................................................................2714.004310000
........................................................TCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAGA....................................................................................................................2614.004400000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGAAG...............2514.004310000
...............AAAATAAGCAGCGTGGACTATGGCC..........................................................................................................................................................................................................................2514.004130000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCATGAAGGC.....2914.004030010
................................................AAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAG.....................................................................................................................................2513.003210000
.................................TATGGCCGACAGAAGAAGTAAGT..........................................................................................................................................................................................................2313.003300000
..............CAAAATAAGCAGCGTGGACTATGGCC..........................................................................................................................................................................................................................2613.003120000
.............................................AAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGG.........................................................................................................................................2413.003300000
...................TAAGCAGCGTGGACTATGGCC..........................................................................................................................................................................................................................2113.003120000
.......................................................................................................................................................................................................................GATTACCGCAACGATTTGTTGGGCGAA................2713.003300000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCA............2213.003210000
....CTCAGGGATCCAAAATAAGCAGCGTGG...................................................................................................................................................................................................................................2713.003300000
...................................TGGCCGACAGAAGAAGTAAGTTCCA-------CG.............................................................................................................................................................................................2713.003111000
......................................................................................................................................................................................................................CGATTACCGCAACGATTTGTTGGG....................2413.003210000
..............................................................................................................................................................................................T---T--CCG-TTTGCAGAGAGCACGATTACCGC..................................2813.003300000
...................TAAGCAGCGTGGACTATGGCCGAC.......................................................................................................................................................................................................................2413.003210000
......................................................................................................................................................................................TT-GT---T---T--CCG-TTTGCAGAGAGCACG..........................................2413.003030000
..............................................AGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAG.....................................................................................................................................2713.003300000
.....................................................................................................................................................................................................................................TTTGTTGGGCGAAGCCATGAAGGCTGG..2713.003210000
...........................................AGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGG.........................................................................................................................................2613.003300000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCCATGAAGG......2813.003120000
.......................................................................................................................................................................................................................................TGTTGGGCGAAGCCATGAAGGCTGG..2513.003012000
...............................................................................T-------------------------------------TTGGCTAGCTT--------AAGAGAATAT------------------------ACTC....................................................................................2613.003210000
............................................GAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTA......................................................................................................................................2813.003120000
...................TAAGCAGCGTGGACTATGGCCGACAGA....................................................................................................................................................................................................................2713.003111000
............TCCAAAATAAGCAGCGTGGACTATG.............................................................................................................................................................................................................................2513.003210000
........................................GACAGAAGAAGTAAGTTCCA-------CGGC--------C-------------------------------------.............................................................................................................................................2513.003030000
..................................................................................................................................................................................GA-TTT-GT---T---T--CCG-TTTGCAGAGAGC.............................................2413.003300000
...............................................................................T-------------------------------------TTGGCTAGCTT--------AAGAGAATAT------------------------ACT.....................................................................................2512.002110000
.....................................................................................................................TTGGCTAGCTT--------AAGAGAATAT------------------------ACTCT---GA-.............................................................................2812.002200000
..................................................................................................................................................................................GA-TTT-GT---T---T--CCG-TTTGCAGAGAG..............................................2312.002200000
...................................................................................................................................................................................................................................GATTTGTTGGGCGAAGCCATGAAGGCTGG..2912.002020000
.................................TATGGCCGACAGAAGAAGTAAGTTCCA-------...............................................................................................................................................................................................2712.002200000
...........................................AGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGC........................................................................................................................................2712.002200000
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGG.........................................................................................................................................2212.002200000
..........................................CAGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGC........................................................................................................................................2812.002200000
.....................................................................................................................................................................................................................................TTTGTTGGGCGAAGCCATGAAGGC.....2412.002010010
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGAC..............................................2412.002020000
............................................GAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TT...........................................................................................................................................2312.002110000
.........................................ACAGAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------.............................................................................................................................................2412.002011000
.................................TATGGCCGACAGAAGAAGTAAGTT.........................................................................................................................................................................................................2412.002110000
...........................................................................................................................................................................................................................ACCGCAACGATTTGTTGGGCGAAGCCA............2712.002200000
...........................................................................................................................................................................................................................ACCGCAACGATTTGTTGGGCGAAGCCAT...........2812.002200000
.........................................................................................................................................................................................................................TTACCGCAACGATTTGTTGGGCGAAGCC.............2812.002110000
.........................................................................................................................................................................................................................TTACCGCAACGATTTGTTGGGCGAAGC..............2712.002100010
................AAATAAGCAGCGTGGACTATGGCCG.........................................................................................................................................................................................................................2512.002200000
.........................................................................................................................................................................................................TTTGCAGAGAGCACGATTACCGC..................................2312.002200000
........................................................TCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGA......................................................................................................................2412.002200000
..............................................................................................................................................................................................................................GCAACGATTTGTTGGGCGAAGCC.............2312.002020000
..................................................................................................................................................................................................................................CGATTTGTTGGGCGAAGCCATGAAG.......2512.002002000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGA.................2312.002100010
..TTCTCAGGGATCCAAAATAAGCAGCGTT....................................................................................................................................................................................................................................2812.002200000
...................................TGGCCGACAGAAGAAGTAAGTTCCA-------C..............................................................................................................................................................................................2612.002101000
.................AATAAGCAGCGTGGACTATGGCCG.........................................................................................................................................................................................................................2412.002100010
........GGGATCCAAAATAAGCAGCGTGGAC.................................................................................................................................................................................................................................2512.002020000
..........................................................CA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAGAATA.................................................................................................................2712.002110000
..............CAAAATAAGCAGCGTGGACTATGGC...........................................................................................................................................................................................................................2512.002110000
........................................................TCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAGAA...................................................................................................................2712.002200000
...................................................TAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCT...................................................................................................................................2412.002020000
...................................................................................................................................................................................................................................GATTTGTTGGGCGAAGCCATGAAGGC.....2612.002020000
.................................................................................................................................................................................................................................ACGATTTGTTGGGCGAAGCCATGAA........2512.002200000
..TTCTCAGGGATCCAAAATAAGCAGCGTGG...................................................................................................................................................................................................................................2912.002200000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCG..................2212.002200000
................................CTATGGCCGACAGAAGAAGTAAGT..........................................................................................................................................................................................................2412.002200000
.......................................CGACAGAAGAAGTAAGTTCCA-------CGGC--------...................................................................................................................................................................................2512.002110000
...........................................................................................................................................................................................................................ACCGCAACGATTTGTTGGGCGAAGCC.............2612.002200000
..............................................AGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGG.........................................................................................................................................2312.002200000
............................................GAAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCT.......................................................................................................................................2712.002110000
...TCTCAGGGATCCAAAATAAGCAGCGTT....................................................................................................................................................................................................................................2712.002020000
...................................TGGCCGACAGAAGAAGTAAGTTCC.......................................................................................................................................................................................................2412.002002000
.................................................................................................................................................................................................................GAGCACGATTACCGCAACGATTTGT........................2512.002110000
.........GGATCCAAAATAAGCAGCGTGGACC................................................................................................................................................................................................................................2511.001010000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGGGCGAA................2411.001000010
............................................................................................................................................................................TCT---GA-TTT-GT---T---T--CCG-TTTGCAGAGAG..............................................2611.001100000
..............................................................................................................................................................................T---GA-TTT-GT---T---T--CCG-TTTGCAGAGA...............................................2311.001100000
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCC...................................................................................................................................2811.001010000
........................................................TCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------A.........................................................................................................................2111.001100000
..TTCTCAGGGATCCAAAATAAGC..........................................................................................................................................................................................................................................2211.001001000
......................................................................................................................................................................................................................................TTGTTGGGCGAAGCCATGAAGGCTGG..2611.001100000
..................................................GTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTC--------..........................................................................................................................2611.001010000
..................................................................................................................................................................................GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCACGAT........................................2911.001100000
.....................................................................................................................TTGGCTAGCTT--------AAGAGAATAT------------------------ACTCT---GA-A............................................................................2911.001100000
.......................................................................................................................................................................................................................................TGTTGGGCGAAGCCATGAAGGCTG...2411.001010000
.......AGGGATCCAAAATAAGCAGCGTGG...................................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................................................................................................ACGATTTGTTGGGCGAAGCCATGAAGGC.....2811.001010000
......................................................................................................................................................................................................................................TTGTTGGGCGAAGCCATGAAGGCTT...2511.001001000
.....................................................................................................................TTGGCTAGCTT--------AAGAGAATAT------------------------ACTC....................................................................................2511.001100000
...TCTCAGGGATCCAAAATAAGC..........................................................................................................................................................................................................................................2111.001001000
.............................................AAGAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCT.......................................................................................................................................2611.001100000
..........................CGTGGACTATGGCCGACAGAAGAA................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................TAT------------------------ACTCT---GA-TTT-GT---T---T--CCG-TTTGCA...................................................2611.001100000
..............................................................................................................................................................................................................................GCAACGATTTGTTGGGCGAAGCCATGAA........2811.001100000
.......................................................TTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAGA....................................................................................................................2711.001100000
.........GGATCCAAAATAAGCAGCGTGGAC.................................................................................................................................................................................................................................2411.001010000
.......................................................TTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------AAGAG.....................................................................................................................2611.001100000
..................................................................................................................................................................................................T--CCG-TTTGCAGAGAGCACGATTACC....................................2511.001100000
.....TCAGGGATCCAAAATAAGCAGCGT.....................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................GAGAGCACGATTACCGCAACGATTT..........................2511.001100000
..................................ATGGCCGACAGAAGAAGTAAGTTC........................................................................................................................................................................................................2411.001010000
...........................................................................................................................................................................................................TGCAGAGAGCACGATTACCGCAACG..............................2511.001100000
..................................................GTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGC....................................................................................................................................2411.001010000
..............CAAAATAAGCAGCGTGGACTAT..............................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................TTTGCAGAGAGCACGATTACCGCAACGAT............................2911.001100000
.................................................................................................................................................................................................................................ACGATTTGTTGGGCGAAGC..............1911.001010000
................................................................................................................................................................................................................AGAGCACGATTACCGCAACGATTTGTTG......................2811.001100000
.........................................................................................................................................................................................................................TTACCGCAACGATTTGTTGGGCGA.................2411.001100000
.....................AGCAGCGTGGACTATGGCCGACAGAA...................................................................................................................................................................................................................2611.001100000
...............................................................................................................................................................................................................................CAACGATTTGTTGGGCGAAGCCATGA.........2611.001100000
.....................................................................................................................TTGGCTAGCTT--------AAGAGAATAT------------------------ACTCC---................................................................................2611.001010000
...................................TGGCCGACAGAAGAAGTAAGTTCCA-------CGG............................................................................................................................................................................................2811.001100000
....................AAGCAGCGTGGACTATGGCCGACA......................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................T--CCG-TTTGCAGAGAGCACGATTACCGC..................................2711.001100000
...............................................................................................................................................................................................................GAGAGCACGATTACCGCAACGATTTGT........................2711.001100000
..............................GACTATGGCCGACAGAAGAAGTAAGTT.........................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................CAGAGAGCACGATTACCGCAACG..............................2311.001100000
..........GATCCAAAATAAGCAGCGTGGACTATG.............................................................................................................................................................................................................................2711.001100000
.........GGATCCAAAATAAGCAGCGTGGACTA...............................................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCACGA.........................................2811.001100000
...TCTCAGGGATCCAAAATAAGCAGG.......................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................TGTTGGGCGAAGCCATGAAGGCTT...2411.001100000
.................................TATGGCCGACAGAAGAAGTAAGTTCCA-------CG.............................................................................................................................................................................................2911.001100000
.......................................CGACAGAAGAAGTAAGTTCCA-------CGG............................................................................................................................................................................................2411.001100000
...................................................TAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------C.........................................................................................................................2611.001001000
..................................................................................................................................................................................................................................CGATTTGTTGGGCGAAGCCATGAAGG......2611.001100000
.......................................................................................................................................................................................................................GATTACCGCAACGATTTGTTGGG....................2311.001010000
.......................................................................................................................................................................................T-GT---T---T--CCG-TTTGCAGAGAGCACGAT........................................2511.001100000
..............................GACTATGGCCGACAGAAGAAGTAAGTTT........................................................................................................................................................................................................2811.001001000
.......................CAGCGTGGACTATGGCCGACAGAAGA.................................................................................................................................................................................................................2611.001100000
...............................................GAAGTAAGTTCCA-------CGGC--------T-------------------------------------TTGGCTAGCTT--------..........................................................................................................................2911.001010000
.......................................................................................................................................................................................................................................TGTTGGGCGAAGCCATGAAGGC.....2211.001010000
...........ATCCAAAATAAGCAGCGTGGACTATGGCC..........................................................................................................................................................................................................................2911.001010000
............................TGGACTATGGCCGACAGAAGAAGT..............................................................................................................................................................................................................2411.001100000
........................................................................................................................................................................................................................ATTACCGCAACGATTTGTTGGGCGAAG...............2711.001100000
..................................................................................................................................................................................GA-TTT-GT---T---T--CCG-TTTGCAGAGAGCAC...........................................2611.001100000
...........................GTGGACTATGGCCGACAGAAGAAGT..............................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................ACCGCAACGATTTGTTGGGCGAAG...............2411.001100000
.....................................................................................................................................................................................................................ACGATTACCGCAACGATTTGTTGGGC...................2611.001100000
...............................................................................T-------------------------------------TTGGCTAGCTT--------AAGAGAATAT------------------------........................................................................................2211.001100000
................................................................................................................................................................................................................................AACGATTTGTTGGGCGAAGCC.............2111.001010000
......................................................................................................................................................................................................................................TTGTTGGGCGAAGCCATGAAGGCT....2411.001010000
.....................AGCAGCGTGGACTATGGCCGACAG.....................................................................................................................................................................................................................2411.001100000
AGTTCTCAGGGATCCAAAATAAGCAGC.......................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................................................................................TACCGCAACGATTTGTTGG.....................1911.001100000
droBip1
AGTTCTCAGGGATCCAAAATAAGCAGTGTGGACTATGGCCGACAAAAGAAGTAAGTTCCA-------CGGC--------G--ATTTCCATC------------------------------------------TTTAAGAGATTCT------------------------ATCCT---TACTCT-TT---T---T--TCT-TTTCCAGGGAGCATGATTACCGCAATGATTTGTTGGGTGAGGCCATGAAGGCTGGTASizeHit CountTotal NormTotal
No Reads
droKik1
AGCTCTCAGGGATCTAAAATAAGCAGTGTCGACTATGGCAGGCAGAAGAAGTGAGAGAGA-AT--TAAGCTCGTCTACTA--------AACA---------------------------------------------------TTG--------------------------GCT---GA-CACT-TGTGG---T--TTC-TTTTCAGGGAGCACGACTACCGCAATGACTTGCTGGGCGAAGCCATGAAGGCTGGTASizeHit CountTotal NormTotal
No Reads
droFic1
AGCTCCCAGGGATCCAAAATAAGTAGTGTTGACTATGGCAGACAGAAAAAGTAAACCTCT----------------ACCA--------AATATTTA--------AA-G-AAACGG-------------------------------------------------------TTACT---AA-TCCT-T---T---T-GCTC-TTTTCAGGGAGCACGACTATCGCAATGACTTGCTGGGCGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotal
No Reads
droEle1
AGCTCCCAAGGATCCAAAATAAGCAGTGTCGACTACGGCAGGCAGAAGAAGTGAGCATAA-------CCC-----CACGTGGTATTT----ATTCAATA------ATGT-------------------------------------------------------------TTGCT---GA-CACT-T---TGTTGTGTGC-CTTTCAGGGAGCACGACTACCGCAACGACTTGCTGGGCGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotal
No Reads
droBia1
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAAAAGTGGGCATTG-------AACTAACTTACTT-ATATTG----ATTTAGGA------T--TGT-----------------------------------------------------------ATAAT---CA-TTTT-C---TGTTT-TTAC-TTTCTAGGGAGCACGACTATCGCAATGACTTACTCGGCGAGGCCATGAAAGCAGGCASizeHit CountTotal NormTotal
No Reads
droTak1
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTATGGCAGGCAGAAAAAGTGAGTATTA-----------------CT--------TTTAATTTG--------GGAATGT-----------------------------------------------------------ATAAT---AA-CCCT-T---TTTCT--TGTTTTTCCAGGGAGCACGACTATCGCAATGATTTGCTGGGCGAGGCTATGAAAGCGGGCASizeHit CountTotal NormTotal
No Reads
droEug1
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGGATTT-ATCT------AATATAAC--------TATAT---G-TA---TGAATGT-------------------------------------------------------------TTATTAATAA-TTT---AT-----G--TCC-TTTTCAGAGAACACGACTATCGCAATGACTTGCTGGGCGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotal
No Reads
dm3
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGCACTTTATAT------ACAATACC--------AACAATTTG--------AATGTGTATGA--------------------------------TTACCATTTCAT-----------------------------------T--TAT-TAACCAGGGAGCATGATTACCGCAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................AAGCAGCGTTGACTACGGCAGGC.......................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GCTGGGGGAGGCCATGAA........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAAATAAGCAGCGTTGACTACGGC...........................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAGCGTTGACTACGGCAGGCAGA....................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...TCCCAGGGATCCAAAATAAGCAGCGTT....................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATAAGCAGCGTTGACTACGGC...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................CAATGACTTGCTGGGGGAGG...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................TTGCTGGGGGAGGCCATGA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................TGGGGGAGGCCATGAAGGCGGG..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........ATCCAAAATAAGCAGCGTTGA..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............AAAATAAGCAGCGTTGAC.................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................TACCGCAATGACTTGCTGGGGGAGGCCT............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTACGGCAGGCAGAAGAA................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GACTTGCTGGGGGAGGCC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................ATGACTTGCTGGGGGAGGCCA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTTGACTACGGCAGGCAGA....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................TAAGCAGCGTTGACTACGGCAGG........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCAAAATAAGCAGCGTTGACTACGGC...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................AGCGTTGACTACGGCAGGCA......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAATAAGCAGCGTTGACTACGGC...........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................AGCAGCGTTGACTACGGCA..........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................GCTGGGGGAGGCCATGAAGGCGG...2311.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AATGACTTGCTGGGGGAGG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................GCGTTGACTACGGCAGGCA......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................CTGGGGGAGGCCATGAAGGCG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCGTTGACTACGGCAGGCAGAAGA.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCAGCGTTGACTACGGCAG.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................TG--------AATGTGTATGA--------------------------------TTACCAT........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................ATTACCGCAATGACTTGCTGGGGGA.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATGACTTGCTGGGGGAGGCCATG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
droSim2
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGATTACGGCAGGCAGAAGAAGTGAGCACATTATAT------ACAATACC--------CACAATTTG--------AATGTGTATGA--------------------------------TTACCATTTCAT-----------------------------------T--TAT-TTACCAGGGAGCATGATTACCGCAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGCACATTATAT------ACAATACC--------CACAATTTG--------AATGTGTATGA--------------------------------TTTCCATTTCAT-----------------------------------T--TAC-TTACCAGGGAGCATGATTACCGCAATGACTTACTGGGGGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................GATTACCGCAATGACTTACTGGGGGAG................2711.0010010
.....................AGCAGCGTTGACTACGGCAGG........................................................................................................................................................................................................................2111.0010010
................................CTACGGCAGGCAGAAGAAGGA.............................................................................................................................................................................................................2120.5010010
droYak3
AGCTCCCAGGGATCCAAAATCAGCAGCGTTGACTACGGCAGGCAGAAGAAGTGAGCACTTTACAT------ATA--ACC--------CACAATTCG--------AA-GTGTATGA--------------------------------CTACCAATTTAT-----------------------------------T--TAC-TTACCAGGGAGCATGACTACCGCAATGACTTGCTGGGGGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................AATGACTTGCTGGGGGAGGCC.............2111.00100000010000
.........................................................................................................................................................................................................................................CTGGGGGAGGCCATGAAGGCGGGC.2411.00100100000000
.......................CAGCGTTGACTACGGCAGGC.......................................................................................................................................................................................................................2011.00100000010000
droEre2
AGCTCCCAGGGATCCAAAATAAGCAGCGTTGACTACGGCAGGCAAAAGAAGTGAGCACTTTACAT------ATG--ACC--------CACAATTCA---------GTGTGTATGA--------------------------------TTACCATTTCAT-----------------------------------T--TAC-TTACCAGGGAGCATGACTACCGCAATGACTTACTAGGGGAGGCCATGAAGGCAGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................GACTTACTAGGGGAGGCCATGAAGGCA....2711.0010001000
....CCCAGGGATCCAAAATAAGCAGC.......................................................................................................................................................................................................................................2311.0010000100
...................................................................................................................................................................................................................................GACTTACTAGGGGAGGCCAT...........2011.0011000000
dp5
AGTGCGCAGGGATCAAAGATCAGCAGCGTGGACTACGGAAGGCAGAAAAAGTAAGGACTA-------CAAC--------A-----------AT--------------------------------------TGTTGAAGATCTTTGC-----------------------ATAAT---AA-TCC-TG---T---T--TCT-TTCACAGAGAGCACGACTATCGCAACGATTTGTTGGGTGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................TTTGTTGGGTGAGGCCATGAAGGCGG...2612.0020000000002
......................................................................................................................................................................................................................................TTGTTGGGTGAGGCCATGAAGGCGGG..2612.0020000000002
........................................................................................................................................................................................................................................GTTGGGTGAGGCCATGAAGGCGG...2312.0020200000000
........................................................................................................................................................................................................................................GTTGGGTGAGGCCATGAAGGCGGGCA2611.0010100000000
....................CAGCAGCGTGGACTACGG............................................................................................................................................................................................................................1811.0010100000000
...........ATCAAAGATCAGCAGCGTGGA..................................................................................................................................................................................................................................2111.0010000001000
........................AGCGTGGACTACGGAAGGCAGAAA..................................................................................................................................................................................................................2411.0010000000001
..................................................................................................................................................................................................................AGCACGACTATCGCAACGATTTGTTG......................2611.0010010000000
.......................................................................................................................................................................................................................................TGTTGGGTGAGGCCATGAAGGCGG...2411.0010100000000
...................................................................................................................................................................................................................................GATTTGTTGGGTGAGGCCATGAAGGCGG...2811.0010000000001
...........................GTGGACTACGGAAGGCAGAAA..................................................................................................................................................................................................................2111.0010000100000
droPer2
AGTGCGCAGGGATCAAAGATCAGCAGCGTCGACTACGGCAGGCAGAAAAAGTAAGGACTA-------CAAC--------A-----------AT--------------------------------------TGTTGAAGATCTTTGC-----------------------ATAAT---AA-TCC-CG---T---T--TCT-TTCGCAGAGAGCACGACTATCGCAACGATTTGTTGGGTGAGGCCATGAAGGCGGGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................GATCAGCAGCGTCGACTACGGC...........................................................................................................................................................................................................................2212.002200000
...........................................................................................................................................................................................................................................GGGTGAGGCCATGAAGGCGG...2011.001000001
........................................................................................................................................................................................................................................GTTGGGTGAGGCCATGAAGGCGGG..2411.001001000
..............AAAGATCAGCAGCGTCGACT................................................................................................................................................................................................................................2011.001100000
droWil2
AGTGCTCAGGGTTCTAAGATAAGCAGCGTCGACTATGGCAGGCAAAAGAAGTGAGTTGAA----------------AATG--------GAGAT---GGAAAA--TG-G-AAATGGTTTAGACTAACTCAACTGCTTATA-----------------------------------------------------------TT-CTTTCAGAGAACATGACTATCGCAATGATTTGCTGGGAGAAGCCATGAAGGCGGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................CAGCGTCGACTATGGCAG.........................................................................................................................................................................................................................1812.00200020
...........................................................................................................................................................................................................................ATCGCAATGATTTGCTGGGAGAA................2311.00100100
...........................................................................................................................................................................................................................ATCGCAATGATTTGCTGGGAGAAGCC.............2611.00100100
.........GGTTCTAAGATAAGCAGCGTCGACT................................................................................................................................................................................................................................2511.00100100
.......AGGGTTCTAAGATAAGCAGC.......................................................................................................................................................................................................................................2011.00100010
....................AAGCAGCGTCGACTATGGCAGGCAA.....................................................................................................................................................................................................................2511.00101000
...................TAAGCAGCGTCGACTATGGCAG.........................................................................................................................................................................................................................2211.00100100
.........GGTTCTAAGATAAGCAGCGTCGACTAT..............................................................................................................................................................................................................................2711.00100010
........................................................................................................................................................................................................................................GCTGGGAGAAGCCATGAAGGC.....2111.00100100
.....................AGCAGCGTCGACTATGGCAGGC.......................................................................................................................................................................................................................2211.00100010
.............CTAAGATAAGCAGCGTCGACTATGGCA..........................................................................................................................................................................................................................2711.00100100
.......................................................TTGAA----------------AATG--------GAGAT---GGAAC.............................................................................................................................................................1940.25100010
droVir3
AGCGCACCGGGCTCCAAGATCAGCAGCGTTGACTACGGCAGGCAAAAGAAGTGAGTGTGG---------------------------------------------------------------------------------------ATCCCATTTAATTTGTTTAGCCTTTAATACCAA-TAA---AT-----A--TTC-ACGGCAGGGATCACGATTATCGCAACGATCTGCTCGGCGAGGCGATGAAAGCGGGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....CACCGGGCTCCAAGATCA............................................................................................................................................................................................................................................1812.002000000000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................GATCTGCTCGGCGAGGCGAT...........2011.001000000000000000000100000000000000000000000000000000000000000000
...........CTCCAAGATCAGCAGCGTTGACTAC..............................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
..CGCACCGGGCTCCAAGATCAGCAGCGTTGACTACGGCAGGCAAAAGAA................................................................................................................................................................................................................4811.001000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................CGGCGAGGCGATGAAAGCG....1911.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TCGGCGAGGCGATGAAAGC.....1911.001000000000000000000000000000000000000001000000000000000000000000
........................AGCGTTGACTACGGCAGGC.......................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
......................GCAGCGTTGACTACGGCAG.........................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
...GCACCGGGCTCCAAGATCA............................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
.....................AGCAGCGTTGACTACGGC...........................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
......................GCAGCGTTGACTACGGCAGGCAAAAG..................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
...........CTCCAAGATCAGCAGCGTTGA..................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.............................TGACTACGGCAGGCAAAAGAA................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
AGCGCGCCAGGCTCGAAGATCAGCAGCGTCGACTATGGCAGGCAAAAGAAGTGAGTGCCG-------AA--------------AGTG----ATTCAGGA------ATATGGATGA--------------------------------TTCC-------------------TTACT---AA-CTA---AT-----A--TGT-CTTGCAGAGATCACGATTACCGCAACGATCTACTGGGCGAGGCCATGAAAGCGGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................GATCAGCAGCGTCGACTATGGCA..........................................................................................................................................................................................................................2311.001001000
....................................................................................................................................................................................................................CACGATTACCGCAACGATCTACTGG.....................2511.001100000
.......................................................................................................................................................................................................................GATTACCGCAACGATCTACTGGGC...................2411.001000010
droGri2
AGCGCACAGGGCTCCAAGATCAGCAGCGTTGACTACGGCAGGCAGAAGAAGTATTATTATTGTGC------AAA--ATA--------CAAAATTAG--------AA-AT-------------------------------------------------------------CTATT---AA-CGA---AT-----T-AATC-TCCGCAGAGAACACGATTATCGCAACGATCTGCTGGGCGAGGCCATGAAAGCGGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:28 PM