ID:

dan_44

 Coordinate:

scaffold_12916:11084881-11084940 +

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

antisense_to_intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.9 -27.8 -27.6

Flybase annnotation

Antisense to intron [Dana\GF14310-in]; utr5 [utr5_plus_809]

No Repeatable elements found

Sense Strand Reads

CAATAGGCCAATTAACCCGGACCAATCAATATGAGTTTTGTGCCAGATTCTGAGTATTCCTGATTGCATAGCTCTGTGTTGTGACTGCTATACGGTCTGGGACACTTCTAACATGGCATCAAATCTGTGTCAACGGCAGCAGGACTCCACAAAGGACTAC

***********************************.(((((((((..((..((((.((((.(((((.(((((...((......)).))))).))))).)))).))))..))..))))).)))).************************************ 		Read size # Mismatch Hit Count Total Norm Total V105

male body		 V106

head

 M044

female body

 V055

head

 M058

embryo

 V039

embryo
..................................................TGAGTATTCCTGATTGCATAGC........................................................................................ 22 0 1 146.00 146 45 63 22 15 1 0
..................................................TGAGTATTCCTGATTGCATAG......................................................................................... 21 0 1 57.00 57 35 4 11 7 0 0
..................................................TGAGTATTCCTGATTGCATAGCT....................................................................................... 23 0 1 56.00 56 39 10 2 5 0 0
........................................................................................TATACGGTCTGGGACACTTCT................................................... 21 0 1 38.00 38 33 3 2 0 0 0
..........................................................................................TACGGTCTGGGACACTTCTAAC................................................ 22 0 1 36.00 36 7 19 9 1 0 0
..........................................................................................TACGGTCTGGGACACTTCTAACA............................................... 23 0 1 26.00 26 7 7 12 0 0 0
.................................................CTGAGTATTCCTGATTGCATAGC........................................................................................ 23 0 1 25.00 25 18 3 3 1 0 0
.................................................CTGAGTATTCCTGATTGCATAG......................................................................................... 22 0 1 21.00 21 12 2 3 4 0 0
................................................TCTGAGTATTCCTGATTGCAT........................................................................................... 21 0 1 18.00 18 12 2 3 1 0 0
........................................................................................TATACGGTCTGGGACACTTC.................................................... 20 0 1 16.00 16 16 0 0 0 0 0
.................................................CTGAGTATTCCTGATTGCATAGCT....................................................................................... 24 0 1 16.00 16 9 6 0 1 0 0
........................................................................................TATACGGTCTGGGACACTTCTAA................................................. 23 0 1 15.00 15 10 5 0 0 0 0
...............................................TTCTGAGTATTCCTGATTGCAT........................................................................................... 22 0 1 13.00 13 9 0 0 4 0 0
........................................................................................TATACGGTCTGGGACACTTCTA.................................................. 22 0 1 13.00 13 6 4 3 0 0 0
..........................................................................................TACGGTCTGGGACACTTCTAA................................................. 21 0 1 11.00 11 2 5 3 1 0 0
...............................................TTCTGAGTATTCCTGATTGCA............................................................................................ 21 0 1 9.00 9 6 1 2 0 0 0
..........................................................................................TACGGTCTGGGACACTTCTA.................................................. 20 0 1 8.00 8 4 1 2 1 0 0
....................................................AGTATTCCTGATTGCATAGCTC...................................................................................... 22 0 1 7.00 7 2 0 3 2 0 0
....................................................AGTATTCCTGATTGCATAGCT....................................................................................... 21 0 1 6.00 6 6 0 0 0 0 0
..................................................TGAGTATTCCTGATTGCATAGCTT...................................................................................... 24 1 1 5.00 5 2 3 0 0 0 0
..........................................................................................TACGGTCTGGGACACTTCT................................................... 19 0 1 4.00 4 0 1 3 0 0 0
................................................TCTGAGTATTCCTGATTGCATA.......................................................................................... 22 0 1 4.00 4 1 1 0 2 0 0
........................................................................................TATACGGTCTGGGACACTTT.................................................... 20 1 1 4.00 4 4 0 0 0 0 0
.................................................CTGAGTATTCCTGATTGCAT........................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0
.................................................CTGAGTATTCCTGATTGCATAGCTT...................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0
....................................................AGTATTCCTGATTGCATAGCTCT..................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0
..................................................TGAGTATTGCTGATTGCATAGC........................................................................................ 22 1 1 2.00 2 0 1 1 0 0 0
...................................................GAGTATTCCTGATTGCATAGC........................................................................................ 21 0 1 2.00 2 0 0 2 0 0 0
.......................................................................................CTATACGGTCTGGGACACTTC.................................................... 21 0 1 2.00 2 2 0 0 0 0 0
.................................................CTGAGTATTCCTGATTGCATAGT........................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TGAGTATTCCTGATTGCATATC........................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
.................................................CTGAGTATTCCTGATTGCATA.......................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0
........................................................................................TATACGGTCTGGGACACTT..................................................... 19 0 1 2.00 2 1 0 1 0 0 0
..................................................TGAGTATTCCTGATTGCATAGCTTT..................................................................................... 25 1 1 2.00 2 0 1 0 1 0 0
...........................................................................................ACGGTCTGGGACACTTCTAACA............................................... 22 0 1 2.00 2 0 0 2 0 0 0
..................................................TGAGTATTCCTGATTGCATAGCTTTT.................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
......................................................................................GCTATACGGTCTGGGACACTTC.................................................... 22 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................ATACGGTCTGGGACACTTCT................................................... 20 0 1 2.00 2 0 0 2 0 0 0
........................................................................................TATACGGTCTGGGACACTTCTT.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TACGGTCTGAGACACTTCTAAC................................................ 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TGAGTATTCTTGATTGCATAGT........................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCTGATTTCATAG......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTACTGATTGCATAG......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
........................................................................................TATACGGTCTGGGACACTTCTAT................................................. 23 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................TACGGTCTGGGACACTTCTAT................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TTAGTATTCCTGATTGCATAGC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................TCTGAGTATTCCTGATTGAAT........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................AGTATTCCTGATTGCATAGCTTT..................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCTGATTGCATAGCA....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................................GATACGGTCTGGGACACTTCT................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TGGGTATTCCTGATTGCATAG......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TGAGTATCCCTGATTGCATAGCT....................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
..................................................TGAGTATTCCTGATTGCATACC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TATACGGTCTGCGACACTTCTAA................................................. 23 1 1 1.00 1 0 1 0 0 0 0
................................................TCTGAGTATTCCAGATTGCAT........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGGGTATTCCTGATTGCATAGC........................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
........................................................................................TATAAGGTCTGGGACACTTCT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCTGAATGCATAGCT....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGGATTCCTGATTGCATAGCT....................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................TACGGTCTGGGACACTTATAACA............................................... 23 1 1 1.00 1 0 1 0 0 0 0
.................................................CTAAGTATTCCTGATTGCATAGC........................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TGAGTATTCCTTATTGCATAG......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................AGTATTCCTGATTGCATAGC........................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
......................................................................................GCTATACGGTCTGGGACACT...................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................TACGGTCTGTGACACTTCTA.................................................. 20 1 1 1.00 1 0 1 0 0 0 0
...................................................GAGTATTCCTGATTGCATAG......................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
........................................................................................TATGCGGTCTGGGACGCTTC.................................................... 20 2 1 1.00 1 0 1 0 0 0 0
........................................................................................TATACGTTCTGGGACACTTC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TACGGTCTGGGCCACTTCTAACA............................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TATACGGTCTGCGACACTTCT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................CTGAGTATTCCTGATTGCATAGCTTT..................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TACGGTCTGGGACGCTTCTAAC................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..................................................TGAGTATTCCTGATTGCATAGAT....................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TGATTATTCCTGATTGCATAGC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TACGGTCTGGGACACTTCCAACA............................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCTGATTTCATAGCT....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TATACGGTCTAGGACACTTCT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................GTATTCCTGATTGCATAGCTC...................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
.................................................CTGAGTATTCCTGATCGCATAGCTTT..................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0
..................................................TAAGTATTCCTGATTGCATAGC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCTGATTGCAAAGC........................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
..................................................TGAGTATTCCTGATTTCCTAG......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
..................................................TGAGTATTCCTGATTGCCTAGCT....................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
........................................................................................TATACGGTCTGGGACACTTCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TGTACGGTCTGGGACACTTCT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTTCTGATTGCATAG......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
................................................TCTGAGTATTCATGATTGCAT........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCTGATTCCATAGC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...................................................GAGTATTCCTGATTGCATAGCT....................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
........................................................................................TATACGGTGTGGGACACTTCTAA................................................. 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TGAGTTTTCCTGATTGCATAGC........................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
........................................................................................TATACGGTCTGGGACGCTTCT................................................... 21 1 1 1.00 1 0 0 0 1 0 0
........................................................................................TATACGGTCTGGTACACTTCT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTCCCGATTGCATAGC........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................AGAGTATTCCAGATTGCATAGC........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TACGGTCTGGGACACTTCTT.................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.................................................CTGCGTATTCCTGATTGCAGAGC........................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0
..................................................TGAGTATTCCTGATCGCATAG......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
....................................................AGTATTCCTGATTGCATAGCTT...................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................TGAGTATTACTGATTGCATAGC........................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.................................................CTGAGTATTCCTGATAGCATAGC........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TACGTTCTTGGACACTTCTA.................................................. 20 2 1 1.00 1 0 0 0 1 0 0
........................................................................................TATACGGTCTGGGACACTTAT................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................AACCGCAGCAGGTCTCCA........... 18 2 20 0.60 12 0 0 12 0 0 0
...................................................................................ACTGCTATCTGGTCTGGGA.......................................................... 19 2 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................CAACGGCAGAAGGACCCCAC.......... 20 2 3 0.33 1 0 0 0 0 1 0
.................................................TTGAGGATTCCTGATGGCATAG......................................................................................... 22 3 3 0.33 1 0 0 0 1 0 0
.................................................................................................TGAGACACGTCTAGCATGGC........................................... 20 3 5 0.20 1 0 0 0 1 0 0
..........................................................................................................................................GCAGAACACCACAAAGGA.... 18 2 17 0.06 1 0 0 0 0 0 1

Anti-sense strand reads

GTTATCCGGTTAATTGGGCCTGGTTAGTTATACTCAAAACACGGTCTAAGACTCATAAGGACTAACGTATCGAGACACAACACTGACGATATGCCAGACCCTGTGAAGATTGTACCGTAGTTTAGACACAGTTGCCGTCGTCCTGAGGTGTTTCCTGATG

************************************.(((((((((..((..((((.((((.(((((.(((((...((......)).))))).))))).)))).))))..))..))))).)))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total V106

head

 M044

female body

 V055

head
.....................................................................................ACGATATGCCAGACCCTGTGAA..................................................... 22 0 1 1.00 1 1 0 0
...................................................................................................................................TTGCCGTAGTCCTCAGGTGT......... 20 2 3 0.33 1 0 1 0
.........GTAATTGGGCCAGGTTA...................................................................................................................................... 17 2 13 0.08 1 0 0 1
...ATGCGGTTATTTAGGCCTG.......................................................................................................................................... 19 3 17 0.06 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:11084831-11084990 + dan_44 confident CA----ATAGGCCAATTAACC----CGGA---CCAATCAA-----------------T-----ATGAGTTTTGTGCCAGATTCTGAGTATTCCTGATTG-CATAGCTCT--------GTGTTGTGACTGCTATACGGTCTGGGACACTTCTAACATGGCATCAAATCTGTGTCAACGGCAGCA-----------------GGACTCCACAAAGGACTAC
droBip1 scf7180000396572:742587-742739 + CA----ATCGA----T----CCC-----A---CTAATCAATA---------------T-----ACGAGTTTTGTGCCAGATTCTGAGTATTCCTGATTG-CATAGCTCT--------GACTTTTGAATGCTATACGGTCTGGGACACTTTTAACATGGCATCAAATAAAAGTCATCGGCAGCT-----------------GGACTTCATCAAGTACTAT
droKik1 scf7180000302389:431057-431174 - AA----TC------------------------------------------------------------ATTTGTGCCAGGTTCTGAGTATTCCTGATTG-CATAGCTCT--------GCGTTGGATTCGCTATACGGTCTGGGACACTCGTAACATGGCAGCAAAGCCAAGTCGACGGTGGAAA----------------------------GTGCAAC
droFic1 scf7180000453932:197641-197791 - CA----ATCGC----T-------------CGAGTGA--------------------CC-----GTGAGTTTTGTGCTACTTTCTGAGTATTCCTGATTG-CATAGCTCT--------GAAAATGAACTGCTATGCTATCAGGGAGACTTCTAACATGGCATCAAATCTGATTCATCCGCGGAAGCT----GTGAAC---------CAACGAACGTCTCT
droEle1 scf7180000490753:30243-30376 + CT----GT--------------------G---CCAA--------------------TC-----GCGAGCTTTGTGCTAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GAGTTTGGATTGCTATACGGTCTGGGACACTTCTAACATGGTATCAAATCTAATTCAACAAATGAAACGC-CAG-----------------------TCTCA
droRho1 scf7180000778253:33950-34078 - AG----GCCCA----T----CGC-----A---CCAA--------------------TC-----TCAAGTTTTGTGCTAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GAGTTCTAATTGCTATACGGTCCGGGACACTTCTAACATGGTATCAAATCTAATTCAACTGAAGAC------------------------------------
droBia1 scf7180000302422:3830597-3830734 + AC----GCG----------------------AAGGA--------------------CC-----GTGAGCTTTGCGCCAGATTCTGAGTATTCCTGATTG-CATAGCTT---------GAGTTTTGATTGCTATACGGTCTGGGACACTTTTAACATGGTGTCAAATCTGAATTACCTGGAGTGTGCAATAGTGG--------------------TTTCA
droTak1 scf7180000415871:385328-385473 + AG----GCTCA----G----CAT-----G---CCGA--------------------CC-----TCGAGTTTTGTGCTAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GAGTTTCGATTGCTATACGGTCTGGGACACTTTTAACATGGCATTAAATCTGATTCAACTAAAGGAACTTGTAGTGAG-------------------CCCAC
droEug1 scf7180000409063:317344-317495 + CG----AGCTC---AT----CCTTCCT-GCTACCTA--------------------CC-----GCGATGTTTGTGCTACATTCTGAGTATTCCTGATTG-CATAGCTCG--------GAGTTGAGATTGCTATACGGTCAGGGAGGCTTTTAACATGGCTTCAAATCTGATTCAACCAAGGGGACTTACAGTGTG--------------------AT-A
dm3 chr2L:5641060-5641185 + dme-mir-960 Known_mirbase C--------------------------------------------------------------ACGGGTTTTGTACCACATTCTGAGTATTCCAGATTG-CATAGCTTT--------GTGCTACTATTGCTATACGGTCTGGGACACTTTTAACATGGTATCAAATCAGATTCACCTAATAGAATCCGTAGTGAG--------------------C--T
droSim2 2l:5445808-5445938 + dsi-mir-960 Known_mirbase AC----GCC------------------------------------------------C-----ACGGGTTTTGTACCACATTCAGAGTATTCCAGGTTG-CATAGCTTT--------GTGCTACTATTGCTGTACGATCTGGGACACTTTTAACATGGTATCAAATCTGATTCCCCCAAACGAACCCGTAATGTG--------------------C--T
droSec2 scaffold_5:3718801-3718928 + dse_335 confident C--------------------------------------------------------------ACGGGTTTTGTACCACATTCTGAGTATTCCAGATTG-CATAGCTTT--------GTGCTACTATTGCTGTACGATCTGGGAGACTTTTAACATGGTATCAAATCTGATTCCCCCAAAGGAACCCGTAATGT--------------------ACTCT
droYak3 2L:13552136-13552254 - dya_163 confident CT----TC--------------------------GC--------------------CC-----GCGTGTTTTGTACCAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GGCCTTTGATTGCTATACGGTCTGGGACACTTTTAACGTGGTATCAAATCTGATTCAACCGAAGGA------------------------------------
droEre2 scaffold_4929:5729534-5729641 + der_241 confident C--------------------------------------------------------------GCGTTTTTTGTGCCAGATTCAGAGTATTCCAGATTG-CATAGCTTT--------GGGCTTTGATTGCTATACGGTCTGGGACACTTTAAACGTGGCATCAA-TCCTATTCAACTGAT---------------------------------------
dp5 4_group4:3182458-3182605 - dps-mir-2563 Known_mirbase AA----ATATA------------------CAC---GTAAATGTGTGTGGGTGTGC-GTGTGT-GC-GGGTGTGTGCTATATTCTGAGTATTGCCTCCTGTTGTAGTTGTGGAATATTGAAAT--ATCAACTATACGGTTCGGAATCCTCTAAATATGGCAGCCACTA-AAGACAACC----------------------------------------AG
droPer2 scaffold_10:2201389-2201532 - dpe_48 confident CAAAAAATATA------------------CAC---GTAAATGTGTGTGGG------TG---T-GC-GGGTGTGTTCTATATTCTGAGTATTGCCTCCTGTTGTAGTTGTGGAATATTGAAAT--ATCAACTATACGGTTCGGAATCCTCTAAATATGGCAGCCACTA-AAGACAACC----------------------------------------AG
droWil2 scf2_1100000004521:8626139-8626299 - dwi_50 confident AT----TAAGA---ATTAACT--------------------TTGAATTGGAAACGATATTGAAAT-GAATTTATGCTAAATTCTGAGTATTCCTGATTG-CATAGTGTG--------TATTTGATACTACTATACGGTCGGGGAAACTTTTAACATGGCCCAAATGATAAAT----GACAGTG-----------------ACAATGAAAAAGAAAATAC
droMoj3 scaffold_6500:14018209-14018311 + dmo_16 confident --------------------------------------------------------------------------GTCATGCTTTGAGTATTCCTTATTG-CATAGTTTA--------CA--TATAATTACTATACAGTCTGGAGCACTTAAAGTTGGGCATAGA--------CAACCGAACAA-----------------------CTTAGGAGTTTTC
droGri2 scaffold_15252:3147000-3147142 + dgr_9 confident TG----ATTGG-----------------------------------------------------CCTTGGTTATGCTAAATTCCAAGTATTCCTTATTG-CATAGTTTA--------TAAT--TGAATACTATACAATCTGGCGTTCTTAGAATTTGTCATAAGACTTCACATAACAAAATGTT------GTTAGCAGCCACATCTC--TGAATTGAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CA----ATAGGCCAATTAACC----CGGA---CCAATCAA-----------------T-----ATGAGTTTTGTGCCAGATTCTGAGTATTCCTGATTG-CATAGCTCT--------GTGTTGTGACTGCTATACGGTCTGGGACACTTCTAACATGGCATCAAATCTGTGTCAACGGCAGCA-----------------GGACTCCACAAAGGACTACSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................TGAGTATTCCTGATTG-CATAGC.................................................................................................................221146.001462210154563
...................................................................................TGAGTATTCCTGATTG-CATAG..................................................................................................................21157.005711007354
...................................................................................TGAGTATTCCTGATTG-CATAGCT................................................................................................................23156.005620053910
..................................................................................................................................TATACGGTCTGGGACACTTCT....................................................................21138.00382000333
....................................................................................................................................TACGGTCTGGGACACTTCTAAC.................................................................22136.00369001719
....................................................................................................................................TACGGTCTGGGACACTTCTAACA................................................................23126.00261200077
..................................................................................CTGAGTATTCCTGATTG-CATAGC.................................................................................................................23125.00253001183
..................................................................................CTGAGTATTCCTGATTG-CATAG..................................................................................................................22121.00213004122
.................................................................................TCTGAGTATTCCTGATTG-CAT....................................................................................................................21118.00183001122
..................................................................................................................................TATACGGTCTGGGACACTTC.....................................................................20116.00160000160
..................................................................................CTGAGTATTCCTGATTG-CATAGCT................................................................................................................24116.0016000196
..................................................................................................................................TATACGGTCTGGGACACTTCTAA..................................................................23115.00150000105
................................................................................TTCTGAGTATTCCTGATTG-CAT....................................................................................................................22113.0013000490
..................................................................................................................................TATACGGTCTGGGACACTTCTA...................................................................22113.0013300064
....................................................................................................................................TACGGTCTGGGACACTTCTAA..................................................................21111.0011300125
................................................................................TTCTGAGTATTCCTGATTG-CA.....................................................................................................................2119.009200061
....................................................................................................................................TACGGTCTGGGACACTTCTA...................................................................2018.008200141
.....................................................................................AGTATTCCTGATTG-CATAGCTC...............................................................................................................2217.007300220
.....................................................................................AGTATTCCTGATTG-CATAGCT................................................................................................................2116.006000060
...................................................................................TGAGTATTCCTGATTG-CATAGCTT...............................................................................................................2415.005000023
....................................................................................................................................TACGGTCTGGGACACTTCT....................................................................1914.004300001
.................................................................................TCTGAGTATTCCTGATTG-CATA...................................................................................................................2214.004000211
..................................................................................................................................TATACGGTCTGGGACACTTT.....................................................................2014.004000040
..................................................................................CTGAGTATTCCTGATTG-CAT....................................................................................................................2013.003000030
..................................................................................CTGAGTATTCCTGATTG-CATAGCTT...............................................................................................................2513.003000030
.....................................................................................AGTATTCCTGATTG-CATAGCTCT--------......................................................................................................2313.003000030
....................................................................................GAGTATTCCTGATTG-CATAGC.................................................................................................................2112.002200000
.................................................................................................................................CTATACGGTCTGGGACACTTC.....................................................................2112.002000020
..................................................................................CTGAGTATTCCTGATTG-CATAGT.................................................................................................................2312.002000020
..................................................................................CTGAGTATTCCTGATTG-CATA...................................................................................................................2112.002000002
..................................................................................................................................TATACGGTCTGGGACACTT......................................................................1912.002100010
.....................................................................................................................................ACGGTCTGGGACACTTCTAACA................................................................2212.002200000
................................................................................................................................GCTATACGGTCTGGGACACTTC.....................................................................2212.002000020
...................................................................................................................................ATACGGTCTGGGACACTTCT....................................................................2012.002200000
..................................................................................................................................TATACGGTCTGGGACACTTCTT...................................................................2212.002000020
..................................................................................................................................TATACGGTCTGGGACACTTCTAT..................................................................2311.001000001
....................................................................................................................................TACGGTCTGGGACACTTCTAT..................................................................2111.001000010
...................................................................................TGAGTATTCCTGATTG-CATAGCA................................................................................................................2311.001000010
.....................................................................................AGTATTCCTGATTG-CATAGC.................................................................................................................2011.001100000
................................................................................................................................GCTATACGGTCTGGGACACT.......................................................................2011.001000001
....................................................................................GAGTATTCCTGATTG-CATAG..................................................................................................................2011.001100000
......................................................................................GTATTCCTGATTG-CATAGCTC...............................................................................................................2111.001100000
..................................................................................................................................TATACGGTCTGGGACACTTCA....................................................................2111.001000010
....................................................................................GAGTATTCCTGATTG-CATAGCT................................................................................................................2211.001100000
....................................................................................................................................TACGGTCTGGGACACTTCTT...................................................................2011.001000010
.....................................................................................AGTATTCCTGATTG-CATAGCTT...............................................................................................................2211.001000010
droBip1
CA----ATCGA----T----CCC-----A---CTAATCAATA---------------T-----ACGAGTTTTGTGCCAGATTCTGAGTATTCCTGATTG-CATAGCTCT--------GACTTTTGAATGCTATACGGTCTGGGACACTTTTAACATGGCATCAAATAAAAGTCATCGGCAGCT-----------------GGACTTCATCAAGTACTATSizeHit CountTotal NormTotal
No Reads
droKik1
AA----TC------------------------------------------------------------ATTTGTGCCAGGTTCTGAGTATTCCTGATTG-CATAGCTCT--------GCGTTGGATTCGCTATACGGTCTGGGACACTCGTAACATGGCAGCAAAGCCAAGTCGACGGTGGAAA----------------------------GTGCAACSizeHit CountTotal NormTotal
No Reads
droFic1
CA----ATCGC----T-------------CGAGTGA--------------------CC-----GTGAGTTTTGTGCTACTTTCTGAGTATTCCTGATTG-CATAGCTCT--------GAAAATGAACTGCTATGCTATCAGGGAGACTTCTAACATGGCATCAAATCTGATTCATCCGCGGAAGCT----GTGAAC---------CAACGAACGTCTCTSizeHit CountTotal NormTotal
No Reads
droEle1
CT----GT--------------------G---CCAA--------------------TC-----GCGAGCTTTGTGCTAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GAGTTTGGATTGCTATACGGTCTGGGACACTTCTAACATGGTATCAAATCTAATTCAACAAATGAAACGC-CAG-----------------------TCTCASizeHit CountTotal NormTotal
No Reads
droRho1
AG----GCCCA----T----CGC-----A---CCAA--------------------TC-----TCAAGTTTTGTGCTAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GAGTTCTAATTGCTATACGGTCCGGGACACTTCTAACATGGTATCAAATCTAATTCAACTGAAGAC------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AC----GCG----------------------AAGGA--------------------CC-----GTGAGCTTTGCGCCAGATTCTGAGTATTCCTGATTG-CATAGCTT---------GAGTTTTGATTGCTATACGGTCTGGGACACTTTTAACATGGTGTCAAATCTGAATTACCTGGAGTGTGCAATAGTGG--------------------TTTCASizeHit CountTotal NormTotal
No Reads
droTak1
AG----GCTCA----G----CAT-----G---CCGA--------------------CC-----TCGAGTTTTGTGCTAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GAGTTTCGATTGCTATACGGTCTGGGACACTTTTAACATGGCATTAAATCTGATTCAACTAAAGGAACTTGTAGTGAG-------------------CCCACSizeHit CountTotal NormTotal
No Reads
droEug1
CG----AGCTC---AT----CCTTCCT-GCTACCTA--------------------CC-----GCGATGTTTGTGCTACATTCTGAGTATTCCTGATTG-CATAGCTCG--------GAGTTGAGATTGCTATACGGTCAGGGAGGCTTTTAACATGGCTTCAAATCTGATTCAACCAAGGGGACTTACAGTGTG--------------------AT-ASizeHit CountTotal NormTotal
No Reads
dm3
C--------------------------------------------------------------ACGGGTTTTGTACCACATTCTGAGTATTCCAGATTG-CATAGCTTT--------GTGCTACTATTGCTATACGGTCTGGGACACTTTTAACATGGTATCAAATCAGATTCACCTAATAGAATCCGTAGTGAG--------------------C--TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................TGAGTATTCCAGATTG-CATAG..................................................................................................................21119260.0019260000002000011000000002232526001000000003864221724457116161381310005010000000000000000021200200000011221615378000112014005041203640046102000000010920000000000000008252883385558900000101634644010012491170112920000509256232372433002139220458000002700000020068431534883483671115000000001000100211090091000001002001000001400116517231531795125900010725139155491613621122041177935969900141071701100000000394197710984502520
...................................................................................TGAGTATTCCAGATTG-CATAGC.................................................................................................................22113950.001395000001301001383000000081182270000100000001861272318136110527292968143926492119000301000000000000000001312136013108001623234335310981013254120132071353084055100000000200000917000002020011102259128471231585011110000019000201032122632502353702021445740968540030407939000003240001000001195921238719619451713455222235111101006304000922462420100000100010000001120010247215891047235210002502222184191611421623160126715426500272452920301000000365158163040311681151020
....................................................................................................................................TACGGTCTGGGACACTTTTAACA................................................................2313204.003204000000000002000000000105302000000000030000111023032221000000000000000000000006321000200001110033002000811400020020371005000000000000200000002000000002676181022300000000000100100131100060000104300848330001690447500000600000000001916071822331073722684900001000000000000900100000000000000000000027149165514300000003003113100160769352996500033800000000000605118541300000
....................................................................................................................................TACGGTCTGGGACACTTTTAAC.................................................................2212715.002715000010000003000000000114600000000000010000440210311232000000000000000000000004231030000000000015013300130200000003310090000000000000000000000000000024833571001000000000000001001300000000003043021040510002170373030001210000002002040121172237122191757480000000000000000020080010000000000000000002412243239322000000100101110002274315563540002914000000000001703537541500000
..................................................................................................................................TATACGGTCTGGGACACTTTT....................................................................2112690.0026900000000000000000000000314500000000000021001000000031020000000000000000000000001010000000001000042070002200010020100000000000000000102000000000001013420101001000000000000000000110001120008302582658130020214440000000100000030014221326492161221022130000000000000120050000000000000000000007401731507100000100022600002696617453163004389000000000001614121181500000
..................................................................................................................................TATACGGTCTGGGACACTTTTA...................................................................2212484.00248400001100000400000000000123000000000000001100210010300200000000000000000000000000100000000010000120070012000010210200000000000000000000300000000000001733223070200000044100000000013000006000610199149405001521452000000210040002001733020122224162331920000000000000000600500000000000000000000096542015190000000100024000010770123491350084814001000000001303324563600010
....................................................................................................................................TACGGTCTGGGACACTTTTAA..................................................................211641.0064100000000000200000000000300000000000000000002100000100000000000000000000000000001100000000000006015000111000000040000000000000000000000000000010001101017044000000000000100000020000000000000483125000052089000000010000000009110112312228400000000000000000100000000000000000000000041201190800000100000410011008621415000440000000001041110502400000
...................................................................................TGAGTATTCCAGATTG-CATA...................................................................................................................201544.005440000000000000000000010012700000000000001000001000000010000000000000000000000000000000000000020030000000000010000100000000000000100000000000000000000111410100000000000000000001100000000040052111700003907100000000000000000214010013000100000000000000000600100000000000000000000011200020000000000100600000007265800012000000000002050200100000
...................................................................................TGAGTATTCCAGATTG-CAT....................................................................................................................191540.0054000000000000000000000000180010000000000001000020100200000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000130230200000000700000001000000010000004013948500003708300000000000000100116210001000000000000000000000700300000000000000000020071417121001000013200700100031672182100150001000000002160321501000
...................................................................................TGAGTATTCCAGATTG-CATAGCT................................................................................................................231402.004020000000000010000000000170000000000000100001100001120000011000000000000000000100000000000002004000000000300000010003000000000000000000000000000002021310000000000001001101000000000000001002105600009037000000010000000000120300041000000000000001000001000000000001000000000000180102011000001010061000112121179800494001000000002091010500000
.....................................................................................AGTATTCCAGATTG-CATAGCTT...............................................................................................................221387.003870000000000000000000000030000000000000000102000312000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000022240030000002000000000000010000000001003701391200110750000000000000000021612001200000000000010000000000000000000010000000000000101010200000010000800001003167700020000000000004060110400000
................................................................................TTCTGAGTATTCCAGATTG-CAT....................................................................................................................221298.002980000000000010000000000070000000000000001033000200310100000000000000000000000111100000000000002000001000000000030000000000000000000000001000000000032081810000000000000100000200000000000003712520002101300000035000000000360021857220100000000000000000010000000000000000000000003503040000000000000200000001142000010000000000001030100000000
...................................................................................TGAGTATTCCAGATTG-CATAGA.................................................................................................................221265.002650000000000011000000000017000000000000000002300000121000000000000000000000000000000000000000000200200000000000000000100000000000000000000000000000000001108151100000000000000000001200100100000030150000301400000000000000000000000000010000053000000000001001000000000000000000000320000000000000000020000100194600010000000000001070000000000
..................................................................................................................................TATACGGTCTGGGACACTTT.....................................................................201245.002450000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000010000000000110190710000170380000000000000000000020002002300000000000000000100100000000000000100000023010000000000000002000000361082300030000000000003060000000000
...................................................................................TGAGTATTCCAGATTG-CATAGCA................................................................................................................231202.00202000000000000000000000001600000000000000000010000000000000000000000000000000000001000000000000020010000400000000300000000000000000000000000000000000010010000000030000000000003000000000000011120000040180000000000000000003000000001300002100000000000300000000000000000000000031801200100000000000110000022525300150000000000000001000000100
....................................................................................................................................TACGGTCTGGGACACTTTTA...................................................................201170.0017000000000000000000000000400000000000000000000000000101000000000000000000000000000000000000000110010000000000000000030000000000000000000000000000000000610000000000000000000011000000000000114134000016019000000000000002001103004210240000000000000000010020000000000000000000000100020000000000000000000101164400052000000000000010000400000
...................................................................................TGAGTATTCCAGATTG-CATAGT.................................................................................................................221118.001180000000000000000000000040000000000000000000000010000000000000000000000000000000000000000100001000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000006020000014012000000000000000000400000000100000000000000000000010000000000000000000000200100100000010000300000010112800110000000000006160020210010
..................................................................................................................................TATACGGTCTGGGACACTTTTAA..................................................................231116.001160000000000000000000000050000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001602300007016000000000000000001000100100010000000000000000000000000000000000000000000100000000000000000020000001375900041000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTT....................................................................191108.00108000000000000000000000003000000000000100000000000000000000000000000000000000000000000000000000100100000100000001000000000000000000001000000000000000000100000000000000000000020000000000002602500004012000000000000000000401121700320000000000000000010000000000000000000000000200000000000000000000000000131100021000000000001020010100000
....................................................................................................................................TACGGTCTGGGACACTTTTAACAATC.............................................................26182.008200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACATC..............................................................25177.007700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACAA...............................................................24146.004600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010050150000301600000000000000000000000020000000001000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAT..................................................................................................................21143.00430000000000000000000000010000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110010000000000000000000000000000000000005018000000300000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010010000202000000000000000001030000000000
................................................................................TTCTGAGTATTCCAGATTG-CATA...................................................................................................................23139.00390000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000200000000000003010000300000000000000000000200103131103000000000000000001000000000000000000000000100100000000000000000000000000000000000000000000000000000000
..................................................................................CTGAGTATTCCAGATTG-CATAG..................................................................................................................22130.0030000000000000000000000004000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000304000020200000000000000000000100010001000000000000000001000000000000000000000000040100000000000000010000000020000010000000000000000000000000
.....................................................................................AGTATTCCAGATTG-CATAGCT................................................................................................................21129.0029000000000000000000000003000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000302030020200000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000020000200000
....................................................................................................................................TACGGTCTGGGACACTTTTAAA.................................................................22127.0027000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000302000020100000000000000000000000010102000000000000000000000000000000000000000000100000000000000000000000000371000000000000000000000000000000
....................................................................................GAGTATTCCAGATTG-CATAGCT................................................................................................................22122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000001080000020000000000000000000100000
................................................................................................................................GCTATACGGTCTGGGACACTTT.....................................................................22121.0021000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406000000300000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000100001000010000000000001000000000000
...................................................................................TGAGTATTCCAGATTG-CATAC..................................................................................................................21120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000006000000200000000000000000010000000000000000000000000000000000000000000000000000020000100000000000000000000141000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTTTTT...................................................................22120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000106000000000000000000000000010000000011000000000000000000000000000000000000000000000000000000000000000000000151200000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAA..................................................................................................................21118.0018000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000100003000010200000000000000000000000000000000000000000000000000000000000000000000000030001000000000000000000000100000000000000000000000000000000
....................................................................................GAGTATTCCAGATTG-CATAG..................................................................................................................20116.0016000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000070000000000000000010000000010000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACT................................................................23116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000060200000000000000000100000000001000000000000000000000000000000000000000000000001000000000000000000000020000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTT......................................................................19116.0016000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000200200000000000000000010000000000
....................................................................................GAGTATTCCAGATTG-CATAGC.................................................................................................................21115.0015000000000000000000000003000000000000000000100000010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000001000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000001010000000020000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACAT...............................................................24114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000501000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000010020100000000000000000000000000000
.................................................................................TCTGAGTATTCCAGATTG-CAT....................................................................................................................21113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000040000000000000000000030000001001000000000000000000000000000000000000000000010100000000000000000000000100000000000000000000000000000000
..................................................................................CTGAGTATTCCAGATTG-CATAGC.................................................................................................................23111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000100000000000000000000000000000000031001000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTTTTAATC................................................................25111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAGCAA...............................................................................................................24111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000010000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACC................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000220000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CA.....................................................................................................................18110.0010000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000101100000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTTTTAAA.................................................................24110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000100000
...................................................................................................................................ATACGGTCTGGGACACTTTTA...................................................................2119.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000002000000000000000000000000000000000000002020000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................AGTATTCCAGATTG-CATAG..................................................................................................................1919.009000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACT.......................................................................1818.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000400000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................ACGGTCTGGGACACTTTTAACA................................................................2218.008000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACG................................................................2318.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000101000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAACAAT..............................................................2518.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GTATTCCAGATTG-CATAGC.................................................................................................................1917.007000000000000000000100005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTTTTC...................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100100000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAGG.................................................................................................................2217.007000000000000000000000001000000000000100000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100100000000000000000000000000000
.................................................................................................................................CTATACGGTCTGGGACACTTTT....................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000200000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTT.....................................................................1817.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000200000
....................................................................................................................................TACGGTCTGGGACACTTTTAAT.................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000002000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTTTA....................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000201000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAGAC................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAGCG................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000200000000
..................................................................................................................................TATACGGTCTGGGACACTTTTAT..................................................................2316.006000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................TGCTATACGGTCTGGGACACTTT.....................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000200000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAAATC...............................................................2416.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTCTGAGTATTCCAGATTG-C......................................................................................................................2016.006000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................TTGCTATACGGTCTGGGACACTTT.....................................................................2416.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
.....................................................................................AGTATTCCAGATTG-CATAGC.................................................................................................................2016.006000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAGCTT...............................................................................................................2416.006000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TATTCCAGATTG-CATAGC.................................................................................................................1815.005000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACGGTCTGGGACACTTTTAATC................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACACTTTC....................................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................TGAGTATTCCAGATTG-CATAGAA................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000
................................................................................TTCTGAGTATTCCAGATTG-CA.....................................................................................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TATACGGTCTGGGACAC........................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AC----GCC------------------------------------------------C-----ACGGGTTTTGTACCACATTCAGAGTATTCCAGGTTG-CATAGCTTT--------GTGCTACTATTGCTGTACGATCTGGGACACTTTTAACATGGTATCAAATCTGATTCCCCCAAACGAACCCGTAATGTG--------------------C--TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................TACGATCTGGGACACTTTTAA..................................................................2115281.0052811700101212002055241000
..................................................................................................................................TGTACGATCTGGGACACTTTT....................................................................2113162.0031620110025179103053100000
..................................................................................................................................TGTACGATCTGGGACACTTT.....................................................................2012145.002145010122014000012115000
....................................................................................................................................TACGATCTGGGACACTTTTA...................................................................2012138.00213800004011000042128000
..................................................................................................................................TGTACGATCTGGGACACTTTTA...................................................................2211367.00136702006111118004031267000
................................................................................................................................GCTGTACGATCTGGGACACTTT.....................................................................2211075.00107500002000000041069000
....................................................................................................................................TACGATCTGGGACACTTTTAAC.................................................................221895.008950837070256000101711000
....................................................................................................................................TACGATCTGGGACACTTTT....................................................................191780.007800200100200205768000
...................................................................................................................................GTACGATCTGGGACACTTTT....................................................................201379.003790000300000000376000
.....................................................................................AGTATTCCAGGTTG-CATAGC.................................................................................................................201310.003100000303600001000000
.....................................................................................AGTATTCCAGGTTG-CATAGCTT...............................................................................................................221294.0029401012315200050103000
..................................................................................................................................TGTACGATCTGGGACACTTTTT...................................................................221275.002750000000000002273000
....................................................................................................................................TACGATCTGGGACACTTTTAACA................................................................231272.002720171030187600100155001
..................................................................................................................................TGTACGATCTGGGACACTT......................................................................191219.0021901001501000100201000
...................................................................................................................................GTACGATCTGGGACACTTTTA...................................................................211158.001580000200000000156000
.....................................................................................AGTATTCCAGGTTG-CATA...................................................................................................................181115.001150000114000001000000
.....................................................................................AGTATTCCAGGTTG-CATAGCT................................................................................................................211103.00103020192110006000000
...................................................................................................................................GTACGATCTGGGACACTTTTAA..................................................................22190.0090000000000000090000
................................................................................................................................GCTGTACGATCTGGGACACTT......................................................................21176.0076000000000000076000
...................................................................................................................................GTACGATCTGGGACACTTT.....................................................................19160.0060000000000000159000
....................................................................................................................................TACGATCTGGGACACTTTTAAA.................................................................22155.0055000000100000054000
..................................................................................................................................TGTACGATCTGGGACACTTTTTT..................................................................23151.0051000000000000051000
..................................................................................................................................TGTACGATCTGGGACACTTTA....................................................................21140.0040000000000000040000
...................................................................................................................................GTACGATCTGGGACACTTTTT...................................................................21135.0035000000000000035000
.....................................................................................AGTATTCCAGGTTG-CATAG..................................................................................................................19129.0029000028000001000000
..................................................................................................................................TGTACGATCTGGGACACT.......................................................................18128.0028040024000000000000
..................................................................................................................................TGTACGATCTGGGACACTTA.....................................................................20125.0025000000000000025000
................................................................................TTCAGAGTATTCCAGGTTG-CAT....................................................................................................................22125.0025000022100002000000
..................................................................................................................................TGTACGATCTGGGACACTTTTAA..................................................................23123.0023000000130000019000
....................................................................................................................................TACGATCTGGGACACTTTTT...................................................................20122.0022000000000000121000
...................................................................................AGAGTATTCCAGGTTG-CATAGC.................................................................................................................22120.0020000018000001100000
...............................................................................................................................TGCTGTACGATCTGGGACACTTT.....................................................................23119.0019000000000000019000
.....................................................................................AGTATTCCAGGTTG-CATAGCTTT--------......................................................................................................23116.0016000016000000000000
.................................................................................TCAGAGTATTCCAGGTTG-CAT....................................................................................................................21113.0013000013000000000000
...................................................................................................................................GTACGATCTGGGACACTTTTAAC.................................................................23112.0012000000000000012000
....................................................................................................................................TACGATCTGGGACACTTTTAACAA...............................................................24112.001201000011000009000
................................................................................................................................GCTGTACGATCTGGGACACT.......................................................................2018.00800001000000007000
...............................................................................................................................TGCTGTACGATCTGGGACACTT......................................................................2218.00800000000000008000
...................................................................................................................................GTACGATCTGGGACACTTTTTT..................................................................2217.00700000000000007000
..............................................................................................................................TTGCTGTACGATCTGGGACACTT......................................................................2317.00700000000000007000
................................................................................TTCAGAGTATTCCAGGTT.........................................................................................................................1817.00700006100000000000
...................................................................................................................................GTACGATCTGGGACACTTTTAT..................................................................2217.00700000000000007000
.................................................................................................................................CTGTACGATCTGGGACACTTT.....................................................................2117.00700000000000007000
................................................................................................................................GCTGTACGATCTGGGACACTTTT....................................................................2317.00700000000000007000
....................................................................................................................................TACGATCTGGGACACTTTTAT..................................................................2117.00700000000000007000
...................................................................................AGAGTATTCCAGGTTG-CA.....................................................................................................................1816.00600006000000000000
................................................................................................................................GCTGTACGATCTGGGACAC........................................................................1916.00600001000000005000
..................................................................................................................................TGTACGATCTGGGACAC........................................................................1715.00500000000000005000
....................................................................................................................................TACGATCTGGGACACTTT.....................................................................1815.00500002001000002000
................................................................................TTCAGAGTATTCCAGGTTG-CA.....................................................................................................................2115.00500003020000000000
................................................................................TTCAGAGTATTCCAGGTTG-CATA...................................................................................................................2314.00400002002000000000
..................................................................................................................................TGTACGATCTGGGACACTTTTG...................................................................2214.00400000000000004000
...............................................................................................................................TGCTGTACGATCTGGGACACT.......................................................................2114.00400000000000004000
...................................................................................................................................GTACGATCTGGGACACTTTTAAA.................................................................2314.00400000000000013000
..................................................................................................................................TGTACGATCTGGGACACTTTTAT..................................................................2314.00400000000000004000
....................................................................................................................................TACGATCTGGGACACTTTTTT..................................................................2123.50700000000000007000
..................................................................................................................................TGTACGATCTGGGACA.........................................................................1613.00300000000002001000
...................................................................................................................................GTACGATCTGGGACACTTTTATT.................................................................2313.00300000000000003000
....................................................................................................................................TACGATCTGGGACACTTTTAACT................................................................2313.00300000001000002000
....................................................................................................................................TACGATCTGGGACACTTTA....................................................................1913.00300000000000003000
.....................................................................................................................................ACGATCTGGGACACTTTTA...................................................................1913.00300000000000003000
..................................................................................................................................TGTACGATCTGGGACACTTAA....................................................................2113.00300000000000003000
..................................................................................................................................TGTACGATCTGGGACACTA......................................................................1912.00200000000000002000
....................................................................................................................................TACGATCTGGGACACTTA.....................................................................1812.00200000000000002000
...................................................................................................................................GTACGATCTGGGACACTTTA....................................................................2012.00200000000000002000
..................................................................................................................................TGTACGATCTGGGACACTTTG....................................................................2112.00200000000000002000
................................................................................................................................GCTGTACGATCTGGGACACTTA.....................................................................2212.00200000000000002000
...................................................................................AGAGTATTCCAGGTTG-CAT....................................................................................................................1912.00200002000000000000
..................................................................................................................................TGTACGATCTGGGACACTTTTAAC.................................................................2412.00200000001000001000
.....................................................................................................................................ACGATCTGGGACACTTTTAA..................................................................2012.00200000000000002000
.................................................................................................................................CTGTACGATCTGGGACACTT......................................................................2012.00200000000000002000
.................................................................................TCAGAGTATTCCAGGTTG-C......................................................................................................................1912.00200002000000000000
..................................................................................CAGAGTATTCCAGGTTG-CATAGC.................................................................................................................2312.00200001100000000000
....................................................................................................................................TACGATCTGGGACACTTAA....................................................................1931.67500000000000005000
.....................................................................................................................................ACGATCTGGGACACTTTTAAC.................................................................2111.00100000000000001000
.....................................................................................................................................ACGATCTGGGACACTTTTAACA................................................................2211.00100000000000001000
....................................................................................................................................TACGATCTGGGACACTT......................................................................1711.00100000000000001000
..................................................................................................................................TGTACGATCTGGGACACTTTTAAA.................................................................2411.00100000000000001000
................................................................................................................................GCTGTACGATCTGGGACACTTTA....................................................................2311.00100000000000001000
......................................................................................................................................CGATCTGGGACACTTTTAA..................................................................1911.00100000000000001000
..................................................................................................................................TGTACGATCTGGGACACTAA.....................................................................2011.00100000000000001000
................................................................................TTCAGAGTATTCCAGGTTG-CAA....................................................................................................................2211.00100000000001000000
.....................................................................................................................................ACGATCTGGGACACTTTTT...................................................................1911.00100000000000001000
....................................................................................................................................TACGATCTGGGACACTTTTAATC................................................................2311.00100000000000001000
........................................................................................ATTCCAGGTTG-CATAGCTTT--------......................................................................................................2011.00100001000000000000
droSec2
C--------------------------------------------------------------ACGGGTTTTGTACCACATTCTGAGTATTCCAGATTG-CATAGCTTT--------GTGCTACTATTGCTGTACGATCTGGGAGACTTTTAACATGGTATCAAATCTGATTCCCCCAAAGGAACCCGTAATGT--------------------ACTCTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................AGTATTCCAGATTG-CATAGCTT...............................................................................................................2211636.0016365138617669
.....................................................................................AGTATTCCAGATTG-CATAGCT................................................................................................................211142.00142113614
...................................................................................TGAGTATTCCAGATTG-CATAGC.................................................................................................................22182.0082132436
..................................................................................................................................TGTACGATCTGGGAGACTTTTA...................................................................22155.005544524
...................................................................................TGAGTATTCCAGATTG-CATAG..................................................................................................................21133.003303102
....................................................................................................................................TACGATCTGGGAGACTTTTAAC.................................................................22131.003102551
..................................................................................................................................TGTACGATCTGGGAGACTTTT....................................................................21127.002712501
....................................................................................................................................TACGATCTGGGAGACTTTTAACA................................................................23118.001801080
....................................................................................................................................TACGATCTGGGAGACTTTTAA..................................................................2119.0090801
....................................................................................................................................TACGATCTGGGAGACTTTTA...................................................................2016.0061500
................................................................................................................................GCTGTACGATCTGGGAGACTTT.....................................................................2216.0060330
.....................................................................................AGTATTCCAGATTG-CATAGCTTT--------......................................................................................................2314.0040211
...................................................................................TGAGTATTCCAGATTG-CATAGCT................................................................................................................2313.0030201
....................................................................................................................................TACGATCTGGGAGACTTTT....................................................................1913.0030300
....................................................................................................................................TACGATCTGGGAGACTTTTAAA.................................................................2212.0020200
..................................................................................................................................TGTACGATCTGGGAGACTTT.....................................................................2012.0020200
....................................................................................GAGTATTCCAGATTG-CATAGCT................................................................................................................2211.0010010
...................................................................................TGAGTATTCCAGATTG-CATAGCA................................................................................................................2311.0010100
...................................................................................TGAGTATTCCAGATTG-CATAGT.................................................................................................................2211.0010100
...................................................................................................................................GTACGATCTGGGAGACTTTTA...................................................................2111.0010100
...................................................................................TGAGTATTCCAGATTG-CAT....................................................................................................................1911.0010001
.................................................................................TCTGAGTATTCCAGATTG-CAT....................................................................................................................2111.0010100
.....................................................................................AGTATTCCAGATTG-CATAGCTTT--------T.....................................................................................................2411.0010100
...................................................................................TGAGTATTCCAGATTG-CATAGCC................................................................................................................2311.0010100
...................................................................................TGAGTATTCCAGATTG-CATAGA.................................................................................................................2211.0010100
.....................................................................................AGTATTCCAGATTG-CATAG..................................................................................................................1911.0010100
................................................................................................................................GCTGTACGATCTGGGAGACTTTT....................................................................2311.0010010
.................................................................................TCTGAGTATTCCAGATTG-CATA...................................................................................................................2211.0010100
.....................................................................................AGTATTCCAGATTG-CATAGCTA...............................................................................................................2211.0010100
......................................................................................GTATTCCAGATTG-CATAGCTT...............................................................................................................2111.0010100
droYak3
CT----TC--------------------------GC--------------------CC-----GCGTGTTTTGTACCAGATTCTGAGTATTCCTGATTG-CATAGCTTT--------GGCCTTTGATTGCTATACGGTCTGGGACACTTTTAACGTGGTATCAAATCTGATTCAACCGAAGGA------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................TGAGTATTCCTGATTG-CATAGC.................................................................................................................22157.00570125322330000
...................................................................................TGAGTATTCCTGATTG-CATAG..................................................................................................................21152.005213140020230000
.....................................................................................AGTATTCCTGATTG-CATAGCTT...............................................................................................................22136.00361700002170000
....................................................................................................................................TACGGTCTGGGACACTTTTAACG................................................................23135.00352200000130000
..................................................................................CTGAGTATTCCTGATTG-CATAG..................................................................................................................22135.0035650012210000
..................................................................................................................................TATACGGTCTGGGACACTTTT....................................................................21126.0026000000260000
..................................................................................CTGAGTATTCCTGATTG-CATAGC.................................................................................................................23121.0021011100180000
..................................................................................................................................TATACGGTCTGGGACACTTTTA...................................................................22113.0013100000120000
.....................................................................................AGTATTCCTGATTG-CATAGCT................................................................................................................2118.00860000020000
..................................................................................................................................TATACGGTCTGGGACACTTTTAA..................................................................2317.00750000020000
....................................................................................................................................TACGGTCTGGGACACTTTTAAC.................................................................2217.00730000040000
...................................................................................TGAGTATTCCTGATTG-CATAGT.................................................................................................................2216.00600000060000
...................................................................................TGAGTATTCCTGATTG-CATA...................................................................................................................2013.00302000010000
..................................................................................CTGAGTATTCCTGATTG-CAT....................................................................................................................2013.00311000010000
...................................................................................TGAGTATTCCTGATTG-CAT....................................................................................................................1913.00300000120000
...................................................................................TGAGTATTCCTGATTG-CATAGCT................................................................................................................2313.00300000030000
..................................................................................................................................TATACGGTCTGGGACACTTT.....................................................................2012.00200000020000
...................................................................................................................................ATACGGTCTGGGACACTTTT....................................................................2012.00200000110000
....................................................................................................................................TACGGTCTGGGACACTTTTAA..................................................................2112.00200000020000
....................................................................................GAGTATTCCTGATTG-CATAGC.................................................................................................................2112.00201000010000
..................................................................................CTGAGTATTCCTGATTG-CATA...................................................................................................................2112.00200000110000
.....................................................................................AGTATTCCTGATTG-CATAGC.................................................................................................................2011.00101000000000
.................................................................................................................................CTATACGGTCTGGGACACTT......................................................................2011.00100000010000
....................................................................................................................................TACGGTCTGGGACACTTTTA...................................................................2011.00100000010000
....................................................................................................................................TACGGTCTGGGACACTTTTAACGT...............................................................2411.00100000010000
...................................................................................TGAGTATTCCTGATTG-CATAGA.................................................................................................................2211.00100100000000
.....................................................................................AGTATTCCTGATTG-CATAG..................................................................................................................1911.00110000000000
................................................................................TTCTGAGTATTCCTGATTG-CAT....................................................................................................................2211.00100000010000
..................................................................................................................................TATACGGTCTGGGACACTTTTT...................................................................2211.00100000010000
...................................................................................................................................ATACGGTCTGGGACACTTTTA...................................................................2111.00100000010000
..................................................................................CTGAGTATTCCTGATTG-CATAGA.................................................................................................................2311.00100000010000
......................................................................................GTATTCCTGATTG-CATAGCT................................................................................................................2011.00100000010000
..................................................................................CTGAGTATTCCTGATTG-CATAGCT................................................................................................................2411.00100000010000
...............................................................................................................................TGCTATACGGTCTGGGACACT.......................................................................2111.00100001000000
................................................................................TTCTGAGTATTCCTGATTG-C......................................................................................................................2011.00100000010000
.................................................................................TCTGAGTATTCCTGATTG-CAT....................................................................................................................2111.00110000000000
...................................................................................TGAGTATTCCTGATTG-CATAGCA................................................................................................................2311.00100000010000
................................................................................TTCTGAGTATTCCTGATTG-CA.....................................................................................................................2111.00100000010000
...................................................................................................................................ATACGGTCTGGGACACTTTTAA..................................................................2211.00100000010000
....................................................................................GAGTATTCCTGATTG-CATAG..................................................................................................................2011.00101000000000
droEre2
C--------------------------------------------------------------GCGTTTTTTGTGCCAGATTCAGAGTATTCCAGATTG-CATAGCTTT--------GGGCTTTGATTGCTATACGGTCTGGGACACTTTAAACGTGGCATCAA-TCCTATTCAACTGAT---------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................AGTATTCCAGATTG-CATAGCTT...............................................................................................................221644.006440003566750
..................................................................................................................................TATACGGTCTGGGACACTTTAA...................................................................221136.00136003012670
..................................................................................CAGAGTATTCCAGATTG-CATAG..................................................................................................................221125.001251011108140
...................................................................................AGAGTATTCCAGATTG-CATAGC.................................................................................................................22190.0090012058290
..................................................................................................................................TATACGGTCTGGGACACTTTA....................................................................21187.0087000176100
.....................................................................................AGTATTCCAGATTG-CATAGCT................................................................................................................21178.007800007440
..................................................................................................................................TATACGGTCTGGGACACTTT.....................................................................20159.005920205320
.................................................................................TCAGAGTATTCCAGATTG-CAT....................................................................................................................21131.003100002560
...................................................................................................................................ATACGGTCTGGGACACTTTAA...................................................................21120.002010001810
...................................................................................AGAGTATTCCAGATTG-CATAG..................................................................................................................21117.001700001610
..................................................................................CAGAGTATTCCAGATTG-CATAGC.................................................................................................................23117.001700001070
...................................................................................................................................ATACGGTCTGGGACACTTTAAA..................................................................22115.001500001410
....................................................................................................................................TACGGTCTGGGACACTTTAAA..................................................................21112.00120000930
..................................................................................CAGAGTATTCCAGATTG-CAT....................................................................................................................20111.00110000830
..................................................................................CAGAGTATTCCAGATTG-CATA...................................................................................................................2119.0090000810
..................................................................................................................................TATACGGTCTGGGACACTTTAAA..................................................................2318.0080000710
.....................................................................................AGTATTCCAGATTG-CATAGCTTT--------......................................................................................................2318.0080000620
....................................................................................................................................TACGGTCTGGGACACTTTAAAC.................................................................2217.0070000610
................................................................................................................................GCTATACGGTCTGGGACACTTT.....................................................................2216.0060000600
.................................................................................TCAGAGTATTCCAGATTG-CATA...................................................................................................................2216.0060000600
...................................................................................................................................ATACGGTCTGGGACACTTTA....................................................................2016.0060000510
.................................................................................................................................CTATACGGTCTGGGACACTTT.....................................................................2116.0060000510
.................................................................................TCAGAGTATTCCAGATTG-CA.....................................................................................................................2014.0040000400
..................................................................................CAGAGTATTCCAGATTG-CATAGT.................................................................................................................2314.0040000400
..................................................................................................................................TATACGGTCTGGGACACTT......................................................................1913.0030000300
..................................................................................CAGAGTATTCCAGATTG-CATAGA.................................................................................................................2313.0030000210
...................................................................................................................................ATACGGTCTGGGACACTTT.....................................................................1912.0020000110
..................................................................................................................................TATACGGTCTGGGACACTTTAAT..................................................................2312.0020000200
....................................................................................................................................TACGGTCTGGGACACTTTA....................................................................1912.0020000110
..............................................................................................................................TTGCTATACGGTCTGGGACAC........................................................................2112.0020000200
..............................................................................................................................TTGCTATACGGTCTGGGACACT.......................................................................2212.0020000200
................................................................................................................................GCTATACGGTCTGGGACACTT......................................................................2111.0010000100
..............................................................................................................................TTGCTATACGGTCTGGGACACTT......................................................................2311.0010000100
.................................................................................................................................CTATACGGTCTGGGACACTTTT....................................................................2211.0010000100
.....................................................................................AGTATTCCAGATTG-CATAG..................................................................................................................1911.0010000100
..................................................................................................................................TATACGGTCTGGGACACTTTG....................................................................2111.0010000100
...................................................................................................................................ATACGGTCTGGGACACTTTAAAC.................................................................2311.0010000010
.................................................................................................................................CTATACGGTCTGGGACACTTTA....................................................................2211.0010000100
.....................................................................................AGTATTCCAGATTG-CATAGCTTT--------G.....................................................................................................2411.0010000010
...................................................................................AGAGTATTCCAGATTG-CATAGCA................................................................................................................2311.0010000010
..............................................................................................................................TTGCTATACGGTCTGGGACA.........................................................................2011.0010000100
...............................................................................................................................TGCTATACGGTCTGGGACACTTT.....................................................................2311.0010000100
..................................................................................CAGAGTATTCCAGATTG-CATAGCT................................................................................................................2411.0010000100
....................................................................................................................................TACGGTCTGGGACACTTTAA...................................................................2011.0010000100
.............................................................................................................................ATTGCTATACGGTCTGGGACACTTT.....................................................................2511.0010000100
....................................................................................................................................TACGGTCTGGGACACTTTAAACT................................................................2311.0010000100
...................................................................................AGAGTATTCCAGATTG-CATAGCT................................................................................................................2311.0010000100
...................................................................................AGAGTATTCCAGATTG-CATAGT.................................................................................................................2211.0010000100
.................................................................................TCAGAGTATTCCAGATTG-C......................................................................................................................1911.0010000100
.................................................................................TCAGAGTATTCCAGATTG-CATAGC.................................................................................................................2411.0010000010
.....................................................................................AGTATTCCAGATTG-CATAGC.................................................................................................................2011.0010000100
..................................................................................CAGAGTATTCCAGATTG-CATAA..................................................................................................................2211.0010000100
dp5
AA----ATATA------------------CAC---GTAAATGTGTGTGGGTGTGC-GTGTGT-GC-GGGTGTGTGCTATATTCTGAGTATTGCCTCCTGTTGTAGTTGTGGAATATTGAAAT--ATCAACTATACGGTTCGGAATCCTCTAAATATGGCAGCCACTA-AAGACAACC----------------------------------------AGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................TGAGTATTGCCTCCTGTTGTAG..................................................................................................................2214550.00455014501056368040781
..................................................................................................................................TATACGGTTCGGAATCCTCTAA...................................................................221661.0066182000311915271
...................................................................................TGAGTATTGCCTCCTGTTGTAGTT................................................................................................................241660.006600804056905740
...................................................................................TGAGTATTGCCTCCTGTTGTAGT.................................................................................................................231637.006373120502019104051
...................................................................................TGAGTATTGCCTCCTGTTGTA...................................................................................................................211328.0032809020103702691
...................................................................................TGAGTATTGCCTCCTGTTGT....................................................................................................................201162.001620401031501390
...................................................................................TGAGTATTGCCTCCTGTTG.....................................................................................................................191157.001570100009201360
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTT...............................................................................................................251105.0010500020180940
...................................................................................TGAGTATTGCCTCCTGTTGTAGA.................................................................................................................23160.006000000020580
..................................................................................................................................TATACGGTTCGGAATCCTCTA....................................................................21150.005000000060440
.................................................................................................................................CTATACGGTTCGGAATCCTCTAA...................................................................23129.002901000030250
...................................................................................TGAGTATTGCCTCCTGTTGTAA..................................................................................................................22128.002800000000280
..................................................................................................................................TATACGGTTCGGAATCCTCTAAA..................................................................23116.001600000020140
..........................................................................................................TGTGGAATATTGAAAT--ATCAAC.........................................................................................22115.001501000000140
...................................................................................TGAGTATTGCCTCCTGTTGTT...................................................................................................................21111.001100010000100
..................................................................................................................................TATACGGTTCGGAATCCTCT.....................................................................20111.00110000004070
....................................................................................GAGTATTGCCTCCTGTTGTAG..................................................................................................................2117.0070500001010
...................................................................................TGAGTATTGCCTCCTGTTGTTT..................................................................................................................2216.0060100000050
...................................................................................TGAGTATTGCCTCCTGTTGTAT..................................................................................................................2216.0060000000060
..................................................................................................................................TATACGGTTCGGAATCCTCTAAT..................................................................2315.0050000000050
...................................................................................TGAGTATTGCCTCCTGTTGTAGAA................................................................................................................2414.0040000000040
...................................................................................TGAGTATTGCCTCCTGTTGTAGTA................................................................................................................2414.0040000000040
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTG...............................................................................................................2513.0030000000030
..................................................................................CTGAGTATTGCCTCCTGTTGTAG..................................................................................................................2313.0030000001020
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTA...............................................................................................................2513.0030000000030
....................................................................................GAGTATTGCCTCCTGTTGTAGT.................................................................................................................2213.0030000000030
........................................................................................ATTGCCTCCTGTTGTAGT.................................................................................................................1812.0020000000020
....................................................................................GAGTATTGCCTCCTGTTGTA...................................................................................................................2012.0020200000000
...................................................................................TGAGTATTGCCTCCTGTTGTAAA.................................................................................................................2312.0020000000020
..................................................................................CTGAGTATTGCCTCCTGTTGTAGT.................................................................................................................2412.0020000001010
..................................................................................................................................TATACGGTTCGGAATCCTCTAAG..................................................................2312.0020000000020
..........................................................................................................TGTGGAATATTGAAAT--ATCA...........................................................................................2021.5030000000030
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTGTT.............................................................................................................2711.0010100000000
...................................................................................TGAGTATTGCCTCCTGTTGTAGTCT...............................................................................................................2511.0010000000010
..................................................................................CTGAGTATTGCCTCCTGTTGTAGTT................................................................................................................2511.0010001000000
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTAA..............................................................................................................2611.0010100000000
....................................................................................GAGTATTGCCTCCTGTTG.....................................................................................................................1811.0010100000000
.......................................................................................TATTGCCTCCTGTTGTAG..................................................................................................................1811.0010000000010
...................................................................................TGAGTATTGCCTCCTGTTT.....................................................................................................................1921.0020000000020
..................................................................................................................................TATACGGTTCGGAATCCTCTTTT..................................................................2311.0010000000010
...................................................................................TGAGTATTGCCTCCTGTTGTC...................................................................................................................2111.0010000000010
....................................................................................................................................TACGGTTCGGAATCCTCTAA...................................................................2011.0010000000010
...................................................................................TGAGTATTGCCTCCTGTT......................................................................................................................1811.0010100000000
..................................................................................................................................TATACGGTTCGGAATCCTCTAG...................................................................2211.0010000000010
......................................................................................GTATTGCCTCCTGTTGTAG..................................................................................................................1911.0010000000010
..................................................................................................................................TATACGGTTCGGAATCCTCTTT...................................................................2211.0010000000010
....................................................................................GAGTATTGCCTCCTGTTGTAGTT................................................................................................................2311.0010000000010
.....................................................................................AGTATTGCCTCCTGTTGTAG..................................................................................................................2011.0010000000010
...................................................................................TGAGTATTGCCTCCTGTTGTAGAAA...............................................................................................................2511.0010000000010
.................................................................................................................................CTATACGGTTCGGAATCCTC......................................................................2011.0010000000010
........................................................................................ATTGCCTCCTGTTGTAGA.................................................................................................................1811.0010000000010
....................................................................................GAGTATTGCCTCCTGTTGTAT..................................................................................................................2111.0010000000010
..................................................................................................................................TATACGGTTCGGAATCCTCTAC...................................................................2211.0010000001000
..................................................................................CTGAGTATTGCCTCCTGTTGT....................................................................................................................2111.0010100000000
................................................................................................................................ACTATACGGTTCGGAATCCTCT.....................................................................2211.0010000001000
..................................................................................................................................TATACGGTTCGGAATCCTCTAAC..................................................................2311.0010000000010
.................................................................................................................................CTATACGGTTCGGAATCCTCTA....................................................................2211.0010000000010
...................................................................................TGAGTATTGCCTCCTGTTGTAGTC................................................................................................................2411.0010001000000
..................................................................................CTGAGTATTGCCTCCTGTTG.....................................................................................................................2011.0010000000010
..................................................TGTGC-GTGTGT-GC-GGGTGT...................................................................................................................................................1940.2510100000000
...........................................................................................................GTGGAATATTGAAAT--...............................................................................................1580.1310000000010
droPer2
CAAAAAATATA------------------CAC---GTAAATGTGTGTGGG------TG---T-GC-GGGTGTGTTCTATATTCTGAGTATTGCCTCCTGTTGTAGTTGTGGAATATTGAAAT--ATCAACTATACGGTTCGGAATCCTCTAAATATGGCAGCCACTA-AAGACAACC----------------------------------------AGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................TGAGTATTGCCTCCTGTTGTAG..................................................................................................................2211328.0013280120631307
...................................................................................TGAGTATTGCCTCCTGTTGTAGT.................................................................................................................231797.0079704031789
...................................................................................TGAGTATTGCCTCCTGTTGTAGTT................................................................................................................241218.0021802010215
..................................................................................................................................TATACGGTTCGGAATCCTCTAA...................................................................221106.0010601012102
...................................................................................TGAGTATTGCCTCCTGTTGTA...................................................................................................................21181.00810202077
...................................................................................TGAGTATTGCCTCCTGTTG.....................................................................................................................19153.00530100052
...................................................................................TGAGTATTGCCTCCTGTTGT....................................................................................................................20140.00400200038
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTT...............................................................................................................25132.00320000032
...................................................................................TGAGTATTGCCTCCTGTTGTAGA.................................................................................................................23110.00100000010
..................................................................................................................................TATACGGTTCGGAATCCTCTA....................................................................2119.009000009
.................................................................................................................................CTATACGGTTCGGAATCCTCTAA...................................................................2313.003000003
..................................................................................................................................TATACGGTTCGGAATCCTCTAAA..................................................................2313.003000003
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTG...............................................................................................................2512.002000002
...................................................................................TGAGTATTGCCTCCTGTTGTAGC.................................................................................................................2312.002000002
...................................................................................TGAGTATTGCCTCCTGTTGTAGTTGT..............................................................................................................2612.002000002
...................................................................................TGAGTATTGCCTCCTGTTGTT...................................................................................................................2112.002000002
...................................................................................TGAGTATTGCCTCCTGTTGTTT..................................................................................................................2212.002000002
..................................................................................................................................TATACGGTTCGGAATCCTCT.....................................................................2012.002000002
...................................................................................TGAGTATTGCCTCCTGTTGG....................................................................................................................2011.001000001
....................................................................................GAGTATTGCCTCCTGTTGTAG..................................................................................................................2111.001010000
.....................................................................................AGTATTGCCTCCTGTTGTAG..................................................................................................................2011.001000100
..................................................................................CTGAGTATTGCCTCCTGTTGTAG..................................................................................................................2311.001000001
....................................................................................GAGTATTGCCTCCTGTTGTAGT.................................................................................................................2211.001000001
...................................................................................TGAGTATTGCCTCCTGTTTA....................................................................................................................2011.001000001
...................................................................................TGAGTATTGCCTCCTGTTGTAA..................................................................................................................2211.001000001
..................................................................................................................................TATACGGTTCGGAATCCTCTTT...................................................................2211.001000001
...................................................................................TGAGTATTGCCTCCTGTT......................................................................................................................1811.001000001
.....................................................................................AGTATTGCCTCCTGTTGTAGT.................................................................................................................2111.001000001
...................................................................................TGAGTATTGCCTCCTGTTGTAGAA................................................................................................................2411.001000001
......................................................................................GTATTGCCTCCTGTTGTAG..................................................................................................................1911.001000001
........................................................................................ATTGCCTCCTGTTGTAGT.................................................................................................................1811.001000001
...................................................................................TGAGTATTGCCTCCTGTTAGT...................................................................................................................2120.501000001
droWil2
AT----TAAGA---ATTAACT--------------------TTGAATTGGAAACGATATTGAAAT-GAATTTATGCTAAATTCTGAGTATTCCTGATTG-CATAGTGTG--------TATTTGATACTACTATACGGTCGGGGAAACTTTTAACATGGCCCAAATGATAAAT----GACAGTG-----------------ACAATGAAAAAGAAAATACSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................TGAGTATTCCTGATTG-CATAGT.................................................................................................................226296.001776837144964218
..................................................................................................................................TATACGGTCGGGGAAACTTTTA...................................................................22149.0049504400
..................................................................................................................................TATACGGTCGGGGAAACTTTT....................................................................21133.0033502800
...................................................................................TGAGTATTCCTGATTG-CATAG..................................................................................................................21617.1710331105309
..................................................................................................................................TATACGGTCGGGGAAACTTTTAA..................................................................23117.001791700
..................................................................................................................................TATACGGTCGGGGAAACTTTTC...................................................................2219.00910800
..................................................................................................................................TATACGGTCGGGGAAACTTT.....................................................................2018.00801700
..................................................................................................................................TATACGGTCGGGGAAACTT......................................................................1913.00300300
..................................................................................................................................TATACGGTCGGGGAAACTTTTAAA.................................................................2412.00220000
..................................................................................CTGAGTATTCCTGATTG-CATAGT.................................................................................................................2361.33800800
...................................................................................TGAGTATTCCTGATTG-CATA...................................................................................................................2061.33801214
..................................................................................................................................TATACGGTCGGGGAAACTTTC....................................................................2111.00100100
..................................................................................................................................TATACGGTCGGGGAAACTTTCCC..................................................................2311.00100100
..................................................................................................................................TATACGGTCGGGGAAACTTTTCC..................................................................2311.00110000
....................................................................................GAGTATTCCTGATTG-CATAGT.................................................................................................................2170.86605001
...................................................................................TGAGTATTCCTGATTG-CAT....................................................................................................................1960.50300102
.....................................................................................AGTATTCCTGATTG-CATAGT.................................................................................................................2070.43300300
..................................................................................................................................TATACGGTCGGGGAAACTTTCT...................................................................2230.33100100
...................................................................................TGAGTATTCCTGATTG-CATAGG.................................................................................................................2260.33211000
...................................................................................TGAGTATTCCTGATTG-CATAGA.................................................................................................................2260.33200200
...................................................................................TGAGTATTCCTGATTG-CATAGTT................................................................................................................2360.33200200
.......................................................................................TATTCCTGATTG-CATAGTGTG--------TATT..................................................................................................2570.29201010
...................................................................................TGAGTATTCCTGATTG-CATAGAA................................................................................................................2360.17100100
...................................................................................TGAGTATTCCTGATTG-CATAGTCA...............................................................................................................2460.17100100
...................................................................................TGAGTATTCCTGATTG-CATAGC.................................................................................................................2260.17100001
...................................................................................TGAGTATTCCTGATTG-CATAGCT................................................................................................................2360.17100100
.................................................................................TCTGAGTATTCCTGATTG-CATAGTGTG--------......................................................................................................2760.17100010
...................................................................................TGAGTATTCCTGATTG-CATAGTG................................................................................................................2360.17100001
...............................................................................ATTCTGAGTATTCCTGATTG-CATAG..................................................................................................................2560.17101000
..................................................................................CTGAGTATTCCTGATTG-CATAG..................................................................................................................2260.17100100
.......................................................................................TATTCCTGATTG-CATAGT.................................................................................................................1870.14101000
droMoj3
--------------------------------------------------------------------------GTCATGCTTTGAGTATTCCTTATTG-CATAGTTTA--------CA--TATAATTACTATACAGTCTGGAGCACTTAAAGTTGGGCATAGA--------CAACCGAACAA-----------------------CTTAGGAGTTTTCSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................TATACAGTCTGGAGCACTTAAA...................................................................2213337.003337141152403283
..................................................................................................................................TATACAGTCTGGAGCACTTAA....................................................................2112255.00225590233202191
..................................................................................................................................TATACAGTCTGGAGCACTTA.....................................................................2011589.00158911091301556
...................................................................................TGAGTATTCCTTATTG-CATAGT.................................................................................................................221914.0091439036442793
....................................................................................................................................TACAGTCTGGAGCACTTAAAGT.................................................................221652.006525011180618
...................................................................................TGAGTATTCCTTATTG-CATAGTC................................................................................................................231363.00363300140328
..................................................................................................................................TATACAGTCTGGAGCACTTT.....................................................................201359.0035910250351
..................................................................................................................................TATACAGTCTGGAGCACTT......................................................................191326.0032620470313
..................................................................................................................................TATACAGTCTGGAGCACTTC.....................................................................201140.0014040210133
....................................................................................................................................TACAGTCTGGAGCACTTAAAG..................................................................211133.0013340210126
..................................................................................................................................TATACAGTCTGGAGCACTTAT....................................................................211130.0013010010128
..................................................................................................................................TATACAGTCTGGAGCACTTAAAA..................................................................23168.00680002066
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTC................................................................23168.00682000066
....................................................................................................................................TACAGTCTGGAGCACTTAAA...................................................................20142.00420003039
..................................................................................................................................TATACAGTCTGGAGCACTTCT....................................................................21135.00350000035
..................................................................................................................................TATACAGTCTGGAGCACTTTT....................................................................21225.50511011048
...................................................................................TGAGTATTCCTTATTG-CATAGTT................................................................................................................23122.00222011018
..................................................................................................................................TATACAGTCTGGAGCACTTAAT...................................................................22121.00210000021
..................................................................................................................................TATACAGTCTGGAGCACTTAAAT..................................................................23121.00210000021
...................................................................................TGAGTATTCCTTATTG-CATAG..................................................................................................................21121.00217002012
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTT................................................................23120.00200000020
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTCT...............................................................24115.00150000015
..................................................................................................................................TATACAGTCTGGAGCACTTATC...................................................................22114.00140010013
..................................................................................................................................TATACAGTCTGGAGCACTTAAAC..................................................................23111.00110000011
..................................................................................................................................TATACAGTCTGGAGCACTTAAC...................................................................22110.00100000010
..................................................................................................................................TATACAGTCTGGAGCACTTTC....................................................................21110.0010100009
....................................................................................................................................TACAGTCTGGAGCACTTAA....................................................................1918.008000107
...................................................................................TGAGTATTCCTTATTG-CATAGTCA...............................................................................................................2417.007000007
...................................................................................TGAGTATTCCTTATTG-CATAGTCC...............................................................................................................2416.006300003
..................................................................................................................................TATACAGTCTGGAGCACTTAAAAA.................................................................2416.006000006
..................................................................................................................................TATACAGTCTGGAGCACTTAAAG..................................................................2316.006000006
..................................................................................................................................TATACAGTCTGGAGCACTTAAAGT.................................................................2416.006000006
..................................................................................................................................TATACAGTCTGGAGCACTTATCC..................................................................2315.005000005
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTTC...............................................................2415.005000104
..................................................................................................................................TATACAGTCTGGAGCACTTAG....................................................................2114.004000004
....................................................................................GAGTATTCCTTATTG-CATAGT.................................................................................................................2114.004400000
.................................................................................TTTGAGTATTCCTTATTG-CATA...................................................................................................................2214.004000103
.................................................................................TTTGAGTATTCCTTATTG-CAT....................................................................................................................2114.004000004
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTCC...............................................................2413.003000003
..................................................................................................................................TATACAGTCTGGAGCACTTAAATC.................................................................2413.003000003
..................................................................................................................................TATACAGTCTGGAGCACTC......................................................................1913.003000003
...................................................................................................................................ATACAGTCTGGAGCACTTAA....................................................................2013.003300000
..................................................................................................................................TATACAGTCTGGAGCACTTAAACC.................................................................2413.003000003
..................................................................................................................................TATACAGTCTGGAGCACTTTTC...................................................................2223.006000006
...................................................................................................................................ATACAGTCTGGAGCACTTAAA...................................................................2112.002200000
..................................................................................................................................TATACAGTCTGGAGCACTTG.....................................................................2012.002000002
..................................................................................................................................TATACAGTCTGGAGCACTTCTC...................................................................2212.002000002
...................................................................................TGAGTATTCCTTATTG-CATA...................................................................................................................2012.002000002
...................................................................................TGAGTATTCCTTATTG-CATAGCC................................................................................................................2312.002000002
...................................................................................TGAGTATTCCTTATTG-CATAGC.................................................................................................................2212.002000101
..................................................................................................................................TATACAGTCTGGAGCACTTAATC..................................................................2312.002000002
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTA................................................................2312.002000002
..................................................................................................................................TATACAGTCTGGAGCACTTAAAGTCA...............................................................2612.002000002
...................................................................................TGAGTATTCCTTATTG-CATAGTTT...............................................................................................................2412.002000002
..................................................................................................................................TATACAGTCTGGAGCACTCT.....................................................................2012.002000002
...................................................................................TGAGTATTCCTTATTG-CAT....................................................................................................................1912.002100100
...................................................................................TGAGTATTCCTTATTG-CATAGTA................................................................................................................2312.002000002
.....................................................................................................................................ACAGTCTGGAGCACTTAAAGT.................................................................2112.002100001
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTTT...............................................................2412.002000002
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTCA...............................................................2412.002000002
..................................................................................................................................TATACAGTCTGGAGCACTTTTT...................................................................2221.503000003
...................................................................................TGAGTATTCCTTATTG-CATAGTTTT--------T.....................................................................................................2611.001000001
.................................................................................TTTGAGTATTCCTTATTG-CATCT..................................................................................................................2311.001000001
.....................................................................................................................................ACAGTCTGGAGCACTTAA....................................................................1811.001100000
...................................................................................TGAGTATTCCTTATTG-CATC...................................................................................................................2011.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTTG....................................................................2111.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTCTT...................................................................2211.001000001
...................................................................................................................................ATACAGTCTGGAGCACTTAAAGA.................................................................2311.001100000
.................................................................................TTTGAGTATTCCTTATTG-CA.....................................................................................................................2011.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAAG...................................................................2211.001000001
..................................................................................TTGAGTATTCCTTATTG-CATAGTC................................................................................................................2411.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAGT..................................................................2111.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAAACA.................................................................2411.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAAATCA................................................................2511.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTTA...............................................................2411.001000001
.....................................................................................AGTATTCCTTATTG-CATAGT.................................................................................................................2011.001000001
...................................................................................................................................ATACAGTCTGGAGCACTTC.....................................................................1911.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAAGG.................................................................2211.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTATCT..................................................................2311.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAC....................................................................2111.001000001
...................................................................................TGAGTATTCCTTATTG-CATAGTTG...............................................................................................................2411.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAAAGTCT...............................................................2611.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAAGCC................................................................2311.001000001
.................................................................................................................................CTATACAGTCTGGAGCACTTAA....................................................................2211.001001000
...................................................................................................................................ATACAGTCTGGAGCACTT......................................................................1811.001100000
..................................................................................................................................TATACAGTCTGGAGCACT.......................................................................1811.001000100
..................................................................................................................................TATACAGTCTGGAGCACTA......................................................................1911.001000001
....................................................................................................................................TACAGTCTGGAGCACTTC.....................................................................1811.001100000
...................................................................................TGAGTATTCCTTATTG-CATAGTCCC--------......................................................................................................2511.001100000
..................................................................................................................................TATACAGTCTGGAGCACTTCC....................................................................2111.001000001
....................................................................................................................................TACAGTCTGGAGCACTTA.....................................................................1811.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAAAGTTT...............................................................2611.001000001
.......................................................................................................................................AGTCTGGAGCACTTAAAGT.................................................................1911.001000001
..................................................................................................................................TATACAGTCTGGAGCACTTAAAGTT................................................................2511.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAAA..................................................................2111.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAAGTCAA..............................................................2511.001000001
....................................................................................................................................TACAGTCTGGAGCACTTAAG...................................................................2011.001000001
.................................................................................TTTGAGTATTCCTTATTG-CATC...................................................................................................................2211.001000001
.....................................................................................................................................ACAGTCTGGAGCACTTAAAGTC................................................................2211.001100000
..................................................................................................................................TATACAGTCTGGAGCACTCTC....................................................................2130.331000001
..................................................................................................................................TATACAGTCTGGAGCACTCTT....................................................................2140.251000001
droGri2
TG----ATTGG-----------------------------------------------------CCTTGGTTATGCTAAATTCCAAGTATTCCTTATTG-CATAGTTTA--------TAAT--TGAATACTATACAATCTGGCGTTCTTAGAATTTGTCATAAGACTTCACATAACAAAATGTT------GTTAGCAGCCACATCTC--TGAATTGAATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................TATACAATCTGGCGTTCTTAGA...................................................................221193.0019312181
...................................................................................CAAGTATTCCTTATTG-CATAGT.................................................................................................................22124.0024915
..................................................................................................................................TATACAATCTGGCGTTCTTAG....................................................................21122.0022616
..................................................................................................................................TATACAATCTGGCGTTCTT......................................................................1914.00431
....................................................................................AAGTATTCCTTATTG-CATAGT.................................................................................................................2114.00431
..................................................................................................................................TATACAATCTGGCGTTCTTA.....................................................................2014.00422
....................................................................................AAGTATTCCTTATTG-CATAGTT................................................................................................................2213.00303
..................................................................................................................................TATACAATCTGGCGTTCTTAGAA..................................................................2311.00101
..................................................................................................................................TATACAATCTGGCGTTCTAGA....................................................................2111.00101
.................................................................................................................................CTATACAATCTGGCGTTCTTA.....................................................................2111.00101
..................................................................................................................................TATACAATCTGGCGTTCTTAGAT..................................................................2311.00101
...................................................................................CAAGTATTCCTTATTG-CATAG..................................................................................................................2111.00101
..................................................................................................................................TATACAATCTGGCGTTCTTAGC...................................................................2211.00101
...................................................................................CAAGTATTCCTTATTG-CATA...................................................................................................................2011.00110
...................................................................................CAAGTATTCCTTATTG-CATAGTTTT--------......................................................................................................2511.00110
...................................................................................................................................ATACAATCTGGCGTTCTTAGA...................................................................2111.00110
...................................................................................................................................ATACAATCTGGCGTTCTTAG....................................................................2011.00110
.................................................................................................................................CTATACAATCTGGCGTTCTTAG....................................................................2211.00101

Generated: 10/20/2015 at 10:14 PM