ID:

dan_438

 Coordinate:

scaffold_12911:4644960-4645110 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.9 -16.9 -16.9

Flybase annnotation

exon [dana_GLEANR_7451:5]; CDS [Dana\GF22909-cds]; intron [Dana\GF22909-in]

Repeatable elements

NameClassFamilyStrand
Hoana1DNAhAT-hobo+
Helitron-2N1_DVirRCHelitron-
mature
  1. scaffold_7339:4053-4080 -
  2. scaffold_12911:1721122-1721149 -
  3. dan_438  scaffold_12911:4645044-4645071 -
  4. scaffold_12913:135989-136016 -
  5. scaffold_13099:2094955-2094982 -
  6. scaffold_13137:326781-326808 -
  7. scaffold_13230:3529884-3529911 -
  8. scaffold_13244:46764-46791 -
  9. scaffold_13250:838100-838127 -
  10. scaffold_13260:1599653-1599680 -
  11. scaffold_13260:1733121-1733148 -
  12. scaffold_13266:1004429-1004456 -
  13. scaffold_13266:11294540-11294567 -
  14. scaffold_13337:10881077-10881104 -
  15. scaffold_13337:22152205-22152232 -
  16. scaffold_13340:2129269-2129296 -
  17. scaffold_13417:6886591-6886618 -
  18. scaffold_13767:736510-736537 -
  19. scaffold_13767:738674-738701 -
  20. scaffold_13770:729115-729142 -
  21. scaffold_7784:2713-2740 +
  22. scaffold_8644:3290-3317 +
  23. scaffold_8889:969-996 +
  24. scaffold_12038:6910-6937 +
  25. scaffold_12525:648-675 +
  26. scaffold_13060:16737-16764 +
  27. scaffold_13077:118526-118553 +
  28. scaffold_13082:2453665-2453692 +
  29. scaffold_13082:3624658-3624685 +
  30. scaffold_13082:3863944-3863971 +
  31. scaffold_13111:928641-928668 +
  32. scaffold_13250:1009052-1009079 +
  33. scaffold_13282:106837-106864 +
  34. scaffold_13335:3248373-3248400 +
  35. scaffold_13337:22506554-22506581 +
  36. scaffold_13339:290386-290413 +
  37. scaffold_13339:1695600-1695627 +
  38. scaffold_13469:510146-510173 +
  39. scaffold_13499:602113-602140 +
  40. scaffold_13499:1187332-1187359 +
  41. scaffold_10223:7613-7640 -
  42. scaffold_10513:146705-146732 -
  43. scaffold_10513:155167-155194 -
  44. scaffold_10727:5768-5795 -
  45. scaffold_12905:497416-497443 -
  46. scaffold_12916:442925-442952 -
  47. scaffold_12922:6088-6115 -
  48. scaffold_13034:723834-723861 -
  49. scaffold_13082:526846-526873 -
  50. scaffold_13082:639997-640024 -
  51. scaffold_13082:1309378-1309405 -
  52. scaffold_13230:2652367-2652394 -
  53. scaffold_13230:3498969-3498996 -
  54. scaffold_13250:3486764-3486791 -
  55. scaffold_13261:86397-86424 -
  56. scaffold_13272:275268-275295 -
  57. scaffold_13272:277942-277969 -
  58. scaffold_13333:507232-507259 -
  59. scaffold_13337:21730418-21730445 -
  60. scaffold_13417:3714281-3714308 -
star
  1. scaffold_8944:1600-1624 -
  2. scaffold_10513:146645-146669 -
  3. scaffold_12218:5724-5748 -
  4. scaffold_12911:1733462-1733486 -
  5. scaffold_12947:1466390-1466414 -
  6. scaffold_13034:808168-808192 -
  7. scaffold_13052:10361-10385 -
  8. scaffold_13082:1309318-1309342 -
  9. scaffold_13082:2424483-2424507 -
  10. scaffold_13239:341928-341952 -
  11. scaffold_13326:399-423 -
  12. scaffold_13335:2657186-2657210 -
  13. scaffold_13340:13110859-13110883 -
  14. scaffold_13413:214-238 -
  15. scaffold_13417:3741332-3741356 -
  16. scaffold_13417:3777494-3777518 -
  17. scaffold_13417:3777634-3777658 -
  18. scaffold_13417:6413840-6413864 -
  19. scaffold_13467:87127-87151 -
  20. scaffold_13767:256834-256858 -
  21. scaffold_133:997-1021 -
  22. dan_438  scaffold_12911:4644984-4645008 -
  23. scaffold_12926:161081-161105 -
  24. scaffold_12935:113669-113693 -
  25. scaffold_12947:174918-174942 -
  26. scaffold_13099:2094895-2094919 -
  27. scaffold_13244:46704-46728 -
  28. scaffold_13260:1218134-1218158 -
  29. scaffold_13266:1004369-1004393 -
  30. scaffold_13266:19298080-19298104 -
  31. scaffold_13337:2900162-2900186 -
  32. scaffold_13337:10881017-10881041 -
  33. dan_2763  scaffold_13337:20970099-20970123 -
  34. scaffold_13340:2129209-2129233 -
  35. scaffold_13340:5896991-5897015 -
  36. scaffold_13340:21946276-21946300 -
  37. scaffold_13417:1886842-1886866 -
  38. scaffold_13417:5229983-5230007 -
  39. scaffold_13444:2415-2439 -
  40. scaffold_13770:382482-382506 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAATCGGAGGACACTATGGCCAGCACATGGATTGGTTCTATCAACCCAGTGTAGGTTTATTAGGCTTTCATTATACCCTTGCAGAGGGTATTATAATTTTGGTCAAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCTGTACGTCGGTCCGTCTGTCCGTCTGTCCGTTTCTACGCAA
*****************************************************************************************......(((((((((((.((((((..((..((....((((....))))....)).....))...)))))).)))))))))))......************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 M044
female body
 V105
male body
.................................................................................................................................................................................................ATGTCCGTCTGTCCGTCTGTA..................................... 21 0 9 0.22 2 1 1 0 0
.........................................................................................ATTATAATTTTGGTCAAAAGTGTGCAAC...................................................................................................................................... 28 0 20 0.20 4 4 0 0 0
................................................................................................................................................................................................CATGTCCGTCTGTCCGTCTGTA..................................... 22 0 9 0.11 1 0 0 1 0
........................................................................................................................................................ATATATTCTTGATCAGGATCACCTC.......................................................................... 25 0 20 0.10 2 0 2 0 0
....................................................................................................................................................................................................TCCGTCTGTCCGTCTGTA..................................... 18 0 12 0.08 1 1 0 0 0
........................................................................................................................................................................................GATATGAGCATGTCCGTCTGTCC............................................ 23 0 20 0.05 1 0 1 0 0
............................................................................................................................................................................................TGAGCATGTCCGTCTGTCCGTCGGTA..................................... 26 1 20 0.05 1 1 0 0 0
............................................................................................................................................................................................TGAGCATGTCCATCTGTCCGTCTGTA..................................... 26 1 20 0.05 1 0 0 1 0
.................................................................................................................................ACATCTCCGACCCTATAAAGT..................................................................................................... 21 0 20 0.05 1 0 0 0 1
..................................................................................................................................................................................................TGTCCGTCTGTCCGTCTGT...................................... 19 0 20 0.05 1 0 0 1 0

Anti-sense strand reads

CTTAGCCTCCTGTGATACCGGTCGTGTACCTAACCAAGATAGTTGGGTCACATCCAAATAATCCGAAAGTAATATGGGAACGTCTCCCATAATATTAAAACCAGTTTTCACACGTTGCGTCACTTCCTCTGTAGAGGCTGGGATATTTCATATATATAAGAACTAGTCCTAGTGGAGGACTCAGCTATACTCGTACAGGCAGACAGGCAGACATGCAGCCAGGCAGACAGGCAGACAGGCAAAGATGCGTT
**************************************************************************......(((((((((((.((((((..((..((....((((....))))....)).....))...)))))).)))))))))))......***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V106
head
 V039
embryo
................................................................................CGTCTCCCATAATATTAAAACCAGT.................................................................................................................................................. 25 0 20 0.85 17 0 17 0 0 0
..............................................................................................................................CTCTGTAGAGGCTGGGATATTTCAT.................................................................................................... 25 0 20 0.65 13 12 0 1 0 0
.............................................................................................................................................................................GGAGGACTCAGCTATACTCGT......................................................... 21 0 20 0.65 13 0 0 13 0 0
.....................................................................................................................................GAGGCTGGGATATTTCATATAT................................................................................................ 22 0 20 0.40 8 8 0 0 0 0
...........................................................................................................................................................................GTGGAGGACTCAGCTATACTCGTA........................................................ 24 0 20 0.15 3 0 0 0 0 3
................................................................................................AAAACCAGTTTTCACACGTTGCGT................................................................................................................................... 24 0 20 0.15 3 0 3 0 0 0
...............................................................................................................................................................................................CGTACAGGCAGACAGGCAGACAT..................................... 23 0 9 0.11 1 0 1 0 0 0
................................................................................................................................................................................................GTACAGGCAGACAGGCAGACAT..................................... 22 0 9 0.11 1 0 1 0 0 0
..................................................................................................AACCAGTTTTCACACGTTGCGTCACTT.............................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................................................ACAGGCAGACAGGCAGACAT..................................... 20 0 10 0.10 1 0 0 0 1 0
..........................................................................................................................................................................................................................CCAGGCAGACAGGCAGACAGGCAAA........ 25 0 12 0.08 1 0 0 0 1 0
..........................................................................................................................................................................................................................CCAGGCAGACAGGCAGACAGGCAA......... 24 0 12 0.08 1 1 0 0 0 0
.....................................................................................................................................................................................................................TGCAGGCAGGCAGACAGGCA.................. 20 1 17 0.06 1 0 0 0 1 0
...................................................................................................................................................................................................CAGGCAGGCAGGCAGACATG.................................... 20 1 18 0.06 1 1 0 0 0 0
...........................................................................................................................................................................................................................CAGGCAGACAGGCAGACAGGCAAAG....... 25 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................TCGTACAGGCAGACAGGCAGAC....................................... 22 0 20 0.05 1 0 0 1 0 0
..................................................................................................................TTGCGTCACTTCCTCTGTAGAGG.................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
..............................................................................................TTAAAACCAGTTTTCACACGTTGCGTCA................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................GGCAGACATGCAGACAGGC........................... 19 1 20 0.05 1 0 0 0 1 0
............................................................................................................................................................................TGGAGGACTCAGCTATACTCGTACA...................................................... 25 0 20 0.05 1 0 0 0 0 1
..................................................................................................AACCAGTTTTCACACGTTGC..................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................................GCAGACAGGCAGACAGGCAAAGATGCG.. 27 0 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12911:4644910-4645160 - dan_438 GAATCG----------GAGGACACTATGGCCAGCACATG-----------------------------------------------------------------------------GATTG--GTTCTATCAACCCAGTGTA-------------------------------------GG-------TTTA-------TTA---GGC-----TTTCATTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGGTCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCT--GTCCGTCTGTACGTCGG----TCCGTCTGTCCGTCTGTCCGT--------TTCTACGCAA
droBip1 scf7180000396544:362254-362496 - AAATTA----------AAGAAAACTGTGGAAAGCTCTTC-----------------------------------------------------------------------------AATTT----------------------------------------------TCATTCCCATTTTCC--CA--------------------GT-----TTTTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGTCCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCT--GTCCGTCTGTCCGTCTGTCTGTCCGTCTGTCTGTCTGTCCGT--------TTCTACGCGA
droKik1 scf7180000302505:5783-6036 - CACGTA----------GGA--CAATAT------------------GATTAACGGTGTCAAAGGCTTTACTATAGTCAGCAT--------------------------------------------------ATTCTCG--------------------TATATCA--------------TTT------------------------GC-----TATTTTTATACCCT--------TGC------------AGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTACAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCT--GTCCGTTCGTCTGTCCG----TCCGTCTGTCCACCTGTCCGT--------TTCTACGCAA
droFic1 scf7180000454096:1515514-1515761 + CAACCA----------CAGAGAACTAAAG--------TCCGTATG------C-----------------------------G----------------------------------AAT----GTGCCATAAACCAC---------------------------------------------------------------------AT-----GATTTTTATACCCT--------TGCA---GA-GCAAAAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGAGCAGAATCGAAATATGTATGTACGTCT--GTCCGTCTGTCCGTCTG----TCCGTCTGTCCGTCTGTCCGTCTGTCCGTTTCCGCGCAA
droEle1 scf7180000490484:71155-71402 - AAGGTG----------GCG--CACAAAGGTCA-------------------------------------------------------------------ACTG-------------GATCG--GCTC--------TA---------ATACA----------------------------CTTCAAAAAATA-----------AGTAGT-----GTTTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGTAGAGTCGATCTAGCCATGTCCGTCT--GTCCGTCCGTCTGTCCG----TCTGTCCGTCCGTCTGTCCGT----CCGTTTATATGCAA
droRho1 scf7180000769112:30810-31054 - AAAATG----------AAGGAGT----------------------------------------------------------------------------TTTGTAGAAAGCAGAAGATTCTGT--------------------------------TTA-------AGCAATAGGGAA--TG-------AGCTTGATA----------------CATTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGGTCAAA-------AGTGTGCTACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAGCCATGTCCGTCT--GTCCGTCTGTCTGTC--------CGTCTGTCCGTCTGTCTGT--------TTCTACGCGA
droBia1 scf7180000302143:192638-192858 - AACA-C-------------G-----------------TCA-------------------------------------GTAT------------------------------------------GTACTACTCATCAGATGT----------------------TA-------------------------------------TTTTAT-----TATTATTATGCCCT--------TGCA---G-------AGGGTATAATGATTTTATTCAGA-------AGTGTACAACGCAGTGAGGGAGACGTTTCCGACCCCATAAAGTATATGTATTCTTGATCAGCGTCAATGGACCAGTCGATCTAGCCATGTCCGCCT--GTTCGTCTGTCTGTCCG----TCTGTC----TGTCCGTCCGT--------TTATACGCAA
droTak1 scf7180000410880:9281-9519 + AAATAA----------GTAAATACTACGAAATGTTCAAT-----------------------------------------------------------------------------AAATT--GTACTACTTACCAAATTT------------------------------------------------------------------T-----GATTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGGTCAGA-------AGTTTGTAACGCAGTGAAGGAGACGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGATCAATAGGGGAGTCGATATAGCCATGTCCGTCT--GTCCGTCTGTCCGTCTG----TCCGTCTGTCCGTCTGTCCGT--------CTGTCCGTCT
droEug1 scf7180000409554:2851270-2851515 + AGGTCG----------AAGGGATCTCT-------------GTCTG------CCA-----------------------------AATG-----------------------------GA-CTGC--------------------------------CCT-------GGCATTTGTGCA--TCTACTA--------------------GG-----TGTTTTTATACCCGTTACTCG---TA---GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAAACGATTGAGCCATGTCCGTCT--GTCCGTCCGTCCGTCCG----TCCGTCCGTCCGTCCGTCCGT------------------
dm3 chr2RHet:1905638-1905856 - TGGAA------------AA--------------------------------------------------------------------------------------------------------GTGATATCATCCCTGAG------GTGAA----------------------------CC-------CCTA----------------------CTAATTATACATGTTACTCG---TA---TA-GTAAAAATGTATACTAAATTCGTTGAAA-------AGTATGTAAAAGGTAGAAGAAGTTATTTCCGACCATAAAAAGGACATATATTCTTGATCAGGGTCAATATCCGAGACGATCTGGCAATGTCCGTCT--CTCCGTTCGTCTGTCTG----ACCGTCCGT--------------------ATGAATGTCG
droSim2 node_34822:7663-7876 - ATTTTGGCCGTCACCAAAAG-----------------TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GCCGTTACGCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACTAAATTAAGTATATATATTCTTGATCAGGATCAATAGACGAGTCGATCTAGCCATGTCCGTTT--GTCCTTCTGTCCGTATG----AGCGTCT--------------------------------
droSec2 scaffold_46:278640-278853 + ATTTTGGCCGTCACCAAAAG-----------------TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GCCGTTACGCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACTATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTAGCCATGTCCGTTT--GTCCTTCTGTCCGTATG----AGCGTCT--------------------------------
droYak3 2L:17983917-17984159 + AACC-G----------GAGGATATTGCGG------------------------------------------------------AAAAAATT------GATTTG------------------------------TATCA--------------------TGG---A--------------TTT------------------------TA-----TATCTTTATACCCGTTACTCG---TA---GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCT--GTCCGTCCGTCTGTCTG----TCCGTCTGTCCGTCTGTCCGT--------CTGTCCGTAT
droEre2 scaffold_4784:4272024-4272268 + AATA-G----------GTGAAGACTCT----------TT------AGCACAT-----------------------------------------------------------------------GTTTTAAAAATTTA-----ACAAATT-------------TTCTATA----------AT-------TTAA-------TTT---AGCTTTGATTTAGTAATGTTAT--------TGCATATTGATGAAAAGCA-----------T-GTTGAA-------AGTATGTAACAGTTAGCAGGCAGCGTTTCCGACTCTA-------TATATATTCTTGATTAGAATCACTAGTCGAGATGATCTGGCCATGTCCGTTTTTGTCCGT----CCGTTTT----TCCGTCAGTTTGTCCGTCCGT--------TTTTCAGTGC
dp5 Unknown_group_8:162493-162740 - CCATGG-----------C-----CTGCGG------------------------------------------------------AAAAGAT------------------------------------TTCCTAGCCTAG--------------------TGT---A--------------TTTTGAA--------------------GA-----GATTTTTGTACCCGACACTCA---A-AATGA-GTATTGGGGTATATTAGATTTGTGGTAAAAGTGTATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCT--GTCCGTCCGTCCGTCTG----TCCGTCAGTCCGTCTGTACGT--------CCGTCCG---
droPer2 scaffold_3197:1894-2170 + GAACTG--------------------CGG------------------------------------------------------AACAAATTAGGACT--ACTACAA---GAA----GAATG--ATTC---CAATTTA---------ATGCAATTTAT-TACATTA--------------ATT--CA--------------------TA-----TTTAATTATACCCGATACTCA---A-AATGA-GTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCT--GTCCGTCCGTCCGTCTG----TCCGTCTGTCCGTCCGTCCGT--------CTGTCCG---
droWil2 scf2_1100000004516:263746-264001 + AAATTT----------GAAATCACTTT------------------GACTCACCTTATGATTGGGTTTGATTTACGAGA----------------------------------------------------------AATATT-------------------------------------CG-------AATA-------TTT---GAA-----ATCTATTATACCCT--------TGCA--------AAAAGGGTATATTAATTTTGGTCAGA-------AGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAGTATATATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCATGTCCGTCC--GTCCGTCCGTCCGTCCG----TCCGTCCGTCCGTCCGTCTGG--------ATCAACGCAA
droVir3 scaffold_13325:319-535 - CATGGA----------ATG--------------------------------------------------------------------------------------------------------ACGATGTCATCCCTGTACA-------------------------------------CG-------ACTG-------CAT---CAC-----CATTACTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGTCGTGT-------AATGTGTAACGCATAGAAGGAGACATCTCCGACCCCATAAAGTATATATATTCTTAATCAGCATCAACAG-AGAGTCGATATAGCCACGTAGGTCT--GTCCGTCTGTCCGCCTG----TCCGTCT--------GTCTGT--------TTCTATGCGA
droMoj3 scaffold_6271:40555-40800 - CACTAAGGCAGCACAAA------------------------------------------------------------------------------------------------------CC--GTATTATT---TTTA----TCAAATG-------------TGA--------------TTT-------------------------T-----TTTTATTATACCCTGAACCCATTGAATATGGGAAATCAGGGTATAATGGTTTTGT-TAAA-------AGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAACTATATATATTCCTGATCAGGGCGACGAGCGAAGTCGATTTGGCCCTGTCCGTCT--GTCTGTCTGTCCGTCCA----TCCGTCCCTCCGTCCGTCCGT--------ATGTAT--TA
droGri2 scaffold_15245:18029528-18029809 - GAATCG----------ATCTAAACTAT-------------GTGCG------C-----------------------------GCAAGAATTA------GTTTTGTCTTAAGC-------TTTTT--------------------------------TTT-------TTTAATCGGGAA--GC-------TAATTT-------------T---GGCTTTCTTATACCCTGCACCCATTAAAAATGGGTAAAAAGGGTACAATGGTTTTGTGCAAA-------TGTATGTAACAGGCAGAAGCAAGTATCTCCGAACCCATAAAGTATATATATTCTTGATTATGGTCAACAAGCGAGTCGATATAGCCATCTTCGTCT--GTCCGTTTGTCCGTCCG----TCCGTCCGTACGTCCGTCCGT--------CTGTATGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GAATCG----------GAGGACACTATGGCCAGCACATG-----------------------------------------------------------------------------GATTG--GTTCTATCAACCCAGTGTA-------------------------------------GG-------TTTA-------TTA---GGC-----TTTCATTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGGTCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCT--GTCCGTCTGTACGTCGG----TCCGTCTGTCCGTCTGTCCGT--------TTCTACGCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCT--GTCCGTCTGTA.................................................2190.222011000
...............................................................................................................................................................................................................................................................ATTATAATTTTGGTCAAA-------AGTGTGCAAC....................................................................................................................................................28200.204040000
.............................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCT--GTCCGTCTGTA.................................................2290.111100000
.....................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCACCTC........................................................................................25200.102002000
.................................................................................................................................................................................................................................................................................................................................................................................TCCGTCT--GTCCGTCTGTA.................................................18120.081010000
.....................................................................................................................................................................................................................................................................................................................................................................GATATGAGCATGTCCGTCT--GTCC........................................................23200.051001000
..............................................................................................................................................................................................................................................................................................................ACATCTCCGACCCTATAAAGT...................................................................................................................21200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCT--GTCCGTCTGT..................................................19200.051100000
droBip1
AAATTA----------AAGAAAACTGTGGAAAGCTCTTC-----------------------------------------------------------------------------AATTT----------------------------------------------TCATTCCCATTTTCC--CA--------------------GT-----TTTTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGTCCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCT--GTCCGTCTGTCCGTCTGTCTGTCCGTCTGTCTGTCTGTCCGT--------TTCTACGCGASizeHit CountTotal NormTotal
No Reads
droKik1
CACGTA----------GGA--CAATAT------------------GATTAACGGTGTCAAAGGCTTTACTATAGTCAGCAT--------------------------------------------------ATTCTCG--------------------TATATCA--------------TTT------------------------GC-----TATTTTTATACCCT--------TGC------------AGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTACAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCT--GTCCGTTCGTCTGTCCG----TCCGTCTGTCCACCTGTCCGT--------TTCTACGCAASizeHit CountTotal NormTotal
No Reads
droFic1
CAACCA----------CAGAGAACTAAAG--------TCCGTATG------C-----------------------------G----------------------------------AAT----GTGCCATAAACCAC---------------------------------------------------------------------AT-----GATTTTTATACCCT--------TGCA---GA-GCAAAAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAGCATCACGAGCAGAATCGAAATATGTATGTACGTCT--GTCCGTCTGTCCGTCTG----TCCGTCTGTCCGTCTGTCCGTCTGTCCGTTTCCGCGCAASizeHit CountTotal NormTotal
No Reads
droEle1
AAGGTG----------GCG--CACAAAGGTCA-------------------------------------------------------------------ACTG-------------GATCG--GCTC--------TA---------ATACA----------------------------CTTCAAAAAATA-----------AGTAGT-----GTTTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGTAGAGTCGATCTAGCCATGTCCGTCT--GTCCGTCCGTCTGTCCG----TCTGTCCGTCCGTCTGTCCGT----CCGTTTATATGCAASizeHit CountTotal NormTotal
No Reads
droRho1
AAAATG----------AAGGAGT----------------------------------------------------------------------------TTTGTAGAAAGCAGAAGATTCTGT--------------------------------TTA-------AGCAATAGGGAA--TG-------AGCTTGATA----------------CATTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGGTCAAA-------AGTGTGCTACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAGCCATGTCCGTCT--GTCCGTCTGTCTGTC--------CGTCTGTCCGTCTGTCTGT--------TTCTACGCGASizeHit CountTotal NormTotal
No Reads
droBia1
AACA-C-------------G-----------------TCA-------------------------------------GTAT------------------------------------------GTACTACTCATCAGATGT----------------------TA-------------------------------------TTTTAT-----TATTATTATGCCCT--------TGCA---G-------AGGGTATAATGATTTTATTCAGA-------AGTGTACAACGCAGTGAGGGAGACGTTTCCGACCCCATAAAGTATATGTATTCTTGATCAGCGTCAATGGACCAGTCGATCTAGCCATGTCCGCCT--GTTCGTCTGTCTGTCCG----TCTGTC----TGTCCGTCCGT--------TTATACGCAASizeHit CountTotal NormTotal
No Reads
droTak1
AAATAA----------GTAAATACTACGAAATGTTCAAT-----------------------------------------------------------------------------AAATT--GTACTACTTACCAAATTT------------------------------------------------------------------T-----GATTTTTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGGTCAGA-------AGTTTGTAACGCAGTGAAGGAGACGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGATCAATAGGGGAGTCGATATAGCCATGTCCGTCT--GTCCGTCTGTCCGTCTG----TCCGTCTGTCCGTCTGTCCGT--------CTGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droEug1
AGGTCG----------AAGGGATCTCT-------------GTCTG------CCA-----------------------------AATG-----------------------------GA-CTGC--------------------------------CCT-------GGCATTTGTGCA--TCTACTA--------------------GG-----TGTTTTTATACCCGTTACTCG---TA---GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAAACGATTGAGCCATGTCCGTCT--GTCCGTCCGTCCGTCCG----TCCGTCCGTCCGTCCGTCCGT------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGGAA------------AA--------------------------------------------------------------------------------------------------------GTGATATCATCCCTGAG------GTGAA----------------------------CC-------CCTA----------------------CTAATTATACATGTTACTCG---TA---TA-GTAAAAATGTATACTAAATTCGTTGAAA-------AGTATGTAAAAGGTAGAAGAAGTTATTTCCGACCATAAAAAGGACATATATTCTTGATCAGGGTCAATATCCGAGACGATCTGGCAATGTCCGTCT--CTCCGTTCGTCTGTCTG----ACCGTCCGT--------------------ATGAATGTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................AGGGTCAATATCCGAGACGATCTGGC.........................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020202010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAAAAGGTA...............................................................................................................................................2425.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000001000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGGGTCAATATCCGAGACGATCTGG..........................................................................2515.0050000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................T--CTCCGTTCGTCTGTCTG----ACCGTCCG...............................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................A-------AGTATGTAAAAGGTAGAAGAAGT.......................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTGAAA-------AGTATGTAAAAGGTAGAAGA..........................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................AGGGTCAATATCCGAGACGATCT............................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAAAAGGTAGAA............................................................................................................................................2722.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
........................................................................................................................................................................................................................................................................................AGTATGTAAAAGGTAGAAGAAGTTA.....................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ACATATATTCTTGATCAGGGT..............................................................................................2122.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCAATATCCGAGACGATCTGGCAATG.....................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCTG----ACCGTCCGT--------------------ATG.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAAAGGTAGA.............................................................................................................................................2722.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000300000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCT--CTCCGTTCGTCTG...............................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TCT--CTCCGTTCGTCTGTCTG----ACCGTCC................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TATCCGAGACGATCTGGCAATGTCCGTC...............................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TCCGTTCGTCTGTCTG----ACCGTCCGT--------------------A.........2612.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGAGACGATCTGGCAATGTCCGT................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAAAAGGTAGA.............................................................................................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAAAGGT................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGGTCAATATC.......................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATGTCCGTCT--CTCCGTTCGTCTGTC.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AA--------------------------------------------------------------------------------------------------------GTGATATCATCCCTGAG------GA..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCT--CTCCGTTCGTCTGTCTG----.......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................TAAAAGGTAGAAGAAGTTATT...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CT--CTCCGTTCGTCTGTCTG----ACCGTC.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TCT--CTCCGTTCGTCTGTCTG----ACCGTC.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AA-------AGTATGTAAAAGGTAGAAGAAGTT......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TCT--CTCCGTTCGTCTGTCTG----ACCG...................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTCCGTTCGTCTGTCTG----ACCGTCC................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................TATCCGAGACGATCTGGCAAT......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GACGATCTGGCAATGTCCGT................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCT--CTCCGTTCGTCTGTCTG----A......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATCCGAGACGATCTGGCAATGTC...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TGATCAGGGTCAATATCCGAGACGA...............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CATATATTCTTGATCAGGGTCAATA.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTG----ACCGTCCGT--------------------ATGAATGTC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................ATACATGTTACTCG---TA---TA-GTA..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTCGTCTGTCTG----ACCGTCCGT--------------------..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGGTCAATATCCGA....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGGGTCAATATCCGAGACGA...............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGGTCAATATCCGA....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GTAGAAGAAGTTATTTCCGACCA...........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGGTCA............................................................................................2151.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................AGGGTCAATATCCGAGACGATC.............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTCGTCTGTCTG----ACCGTCCGT--------------------A.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................A-------AGTATGTAAAAGGTAGAAGAAGTT......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCAGGGTCAATATCCGAGACGATCTGGC.........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCCGTCT--CTCCGTTCGTCTGTCTG----ACC....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGGGTCAATATCCGAGACGATC.............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATATCCGAGACGATCTGGCAATGTCC..................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................AA-------AGTATGTAAAAGGTAGAAGAAGTATC....................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCT--CTCCGTTCGTCTGTC.............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATCTGGCAATGTCCGTCT--CT..........................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TAGAAGAAGTTATTTCCGACCATAA........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGGTCAATATCCGA....................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGGGTCAATATCCGAGACGATCTG...........................................................................2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCAGGGTCAATATCCGAGACGATCTGG..........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAAAAGGTAGAAGAAGT.......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTCCGTTCGTCTGTCTG----ACC....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................CCTGAG------GTGAA----------------------------CC-------CCTA----------------------CTAATTATA.......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCCGACCATAAAAAGGACATATATTCT........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GGTCAATATCCGAGACGATCT............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATGTCCGTCT--CTCCGTTCGTCTG...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCCGAGACGATCTGGCAATGTCCGTC...............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGGTCAATATCCG.....................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CAGGGTCAATATCCGAGACGATCTG...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TATTTCCGACCATAAAAAGGACA................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CATATATTCTTGATCAGGGT..............................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAAAAGGT................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAAAGGTAGAA............................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAAAGGTA...............................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTG----ACCGTCCGT--------------------AT........1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TGAAA-------AGTATGTAAAAGGTAG..............................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTGAAA-------AGTATGTAAAAGGTAGAAG...........................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAAA....................................................................................................................................................19120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGGTCAAT..........................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGGTCA............................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGGTC.............................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAAAGG.................................................................................................................................................2380.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAAAAGGG................................................................................................................................................2480.1310000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAAAA...................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AATTCGTTGAAA-------AGTATGT.......................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATTTTGGCCGTCACCAAAAG-----------------TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GCCGTTACGCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACTAAATTAAGTATATATATTCTTGATCAGGATCAATAGACGAGTCGATCTAGCCATGTCCGTTT--GTCCTTCTGTCCGTATG----AGCGTCT--------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------AGTA..........................................................................................................................................................27628.17169000000356030431000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAACAGGC................................................................................................................................................3165.8335000000209600000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAAC....................................................................................................................................................2784.5036001720044360000000
...............................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTAGCCATGTCCGTT...............................................................2414.00400001001001010000
....................................................................................................................................................................................................GCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGAG................................................................................................................................................................................2714.00400000000004000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGAA........................................................................................................................................25203.0561000400000057000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTTT--GTCCTTCTGTCCGTATG----.......................................2613.00300000021000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGCAGA.............................................................................................................................................27202.60520000003300000190000
...........................................................................................................................................................................................................................................................GGGTATACGAGATTCGTTGAAA-------AGTA..........................................................................................................................................................2672.4317000000110510000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTTT--GTCCTTCTGTCCGTAT............................................2512.00200000000200000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------AG............................................................................................................................................................2561.831100000012332000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGG..........................................................................................................................................23201.5531000000000031000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAACA...................................................................................................................................................2881.501200000043230000000
............................................................................................................................................................................................................................................................GGTATACGAGATTCGTTGAAA-------AGTA..........................................................................................................................................................2581.381100000024140000000
.................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGAT..............................................................................................23201.3026000000026000000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTA......................................................................................................................................................2581.251000000041121010000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGA.........................................................................................................................................24201.2525000000000000250000
...................................................................................................................................................................................................................................................................................................................TCCGACTAAATTAAGTATATATATTCT........................................................................................................2711.00100000000100000000
.TTTTGGCCGTCACCAAAAG-----------------TGG-------------------------------------C........................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
.....................................................................................................................................................................................................CA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGAG................................................................................................................................................................................2611.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGACGAGTCGATCTA...........................................................................2521.00200000020000000000
......................................................................................................................................................................................................................CTTGTTAT-------------------------ACTAGGGTATACGAG................................................................................................................................................................................2311.00100000000001000000
...................................................................................................................................................................................................................................................................................................................TCCGACTAAATTAAGTATATATATT..........................................................................................................2511.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTATG----AGCGTCT--------------------------------1611.00100000000001000000
..................................................................................................................................................................................................................................................................................................................TTCCGACTAAATTAAGTATATATATA..........................................................................................................2611.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCCGTTT--GTCCTTCTGTCCGTATG----AG.....................................2611.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTAGCCATGTCCGTTT--G...........................................................2611.00100010000000000000
....................................................................................................................................................................................................GCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACG..................................................................................................................................................................................2511.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................GATCAGGATCAATAGACGAGTC.................................................................................22100.90900000900000000000
..................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGACGAGTCGATCT............................................................................2460.83500000030020000000
..................................................................................................................................................................................................................................................................CGAGATTCGTTGAAA-------AGTATGTAACAGGC................................................................................................................................................2960.83500000021200000000
................................................................................................................................................................................................TTACGCA---T-----------CTTGTTAT-------------------------ACTAG..........................................................................................................................................................................................2140.75300003000000000000
..................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGACGAGTCGAT..............................................................................2260.67400000030100000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------AGTATGT.......................................................................................................................................................2660.67400010002100000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAACAGG.................................................................................................................................................3060.67400000021100000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------..............................................................................................................................................................2380.63500000001004000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGAAG.......................................................................................................................................26200.6012000000000012000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGCA...............................................................................................................................................25200.6012000000000120000000
..............................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGACGAGTCGA...............................................................................2570.57400000021000010000
.................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATC.............................................................................................24200.5511000000001100000000
..................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGACGAGTCGATCTAGC.........................................................................2720.50100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................TAGACGAGTCGATCTAGCCATGTCCGT................................................................2720.50100010000000000000
.................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGACGAGTCGATCTA...........................................................................2620.50100000000010000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGT.......................................................................................................................................................2480.50400000001120000000
.............................................................................................................................................................................................................................................................................................................................................................GACGAGTCGATCTAGCCATGTCCG.................................................................2420.50100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................GACGAGTCGATCTAGCCATGTCCGT................................................................2520.50100000000001000000
............................................................................................................................................................................................................................................................................................................................................................AGACGAGTCGATCTAGCCATGTCCGT................................................................2620.50100000000001000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAA.....................................................................................................................................................2680.50400000000220000000
................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCGTTT--G...........................................................2520.50100000000001000000
.................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGACGAGTCGATC.............................................................................2460.50300000000003000000
...........................................................................................................................................................................................................................................................GGGTATACGAGATTCGTTGAAA-------A.............................................................................................................................................................23100.40400000001030000000
..................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGTT...................................................................................................................................17200.40800000000008000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAACAGC.................................................................................................................................................3080.38300000020100000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATG........................................................................................................................................................2380.38300000010020000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTT..........................................................................................................................................................21140.36500000021011000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------AGTATG........................................................................................................................................................2560.33200100001000000000
..................................................................................................................................................................................................................................................................CGAGATTCGTTGAAA-------AGTATGTAACAGG.................................................................................................................................................2860.33200000011000000000
....................................................................................................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCGTTT--GTCC........................................................2430.33100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................ACGAGTCGATCTAGCCAT......................................................................1830.33100000000001000000
...................................................................................................................................................................................TG-------GCCGTTACGCA---T-----------CTTGTTAT-------------------------A..............................................................................................................................................................................................2330.33100000001000000000
...................................................................................................................................................................................TG-------GCCGTTACGCA---T-----------CTTGTTAT-------------------------ACT............................................................................................................................................................................................2530.33100000001000000000
..............................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGACGAGTCGAT..............................................................................2660.33200000002000000000
..............................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGACGAGTCGATC.............................................................................2760.33200000000002000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------AGTATGTAAC....................................................................................................................................................2960.33200010001000000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGGCAG..............................................................................................................................................26200.30600000000060000000
...............................................................................................................................................................................................................................................................ATACGAGATTCGTTGAAA-------AGTATGT.......................................................................................................................................................2570.29200000000101000000
...............................................................................................................................................................................................................................................................ATACGAGATTCGTTGAAA-------AGTATG........................................................................................................................................................2470.29200200000000000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGT...........................................................................................................................................................20110.27300000000021000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------..............................................................................................................................................................19110.27300000000003000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------AGTATGTAACAGG.................................................................................................................................................3240.25100000010000000000
.................................................................................................................................................................................................................................................................ACGAGATTCGTTGAAA-------AGTATGTAAC....................................................................................................................................................2680.25200200000000000000
..........................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCGT....................................................................................................................................24200.25500000000200030000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------A.............................................................................................................................................................2480.25200000000020000000
...........................................................................................................................................................................................................................................................GGGTATACGAGATTCGTTGAAA-------AG............................................................................................................................................................2480.25200000001010000000
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACAGG.................................................................................................................................................23200.25500050000000000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------AG............................................................................................................................................................2190.22200200000000000000
...............................................................................................................................................................................................................................................................ATACGAGATTCGTTGAAA-------AGT...........................................................................................................................................................21100.20200000000002000000
..............................................................................TGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GC........................................................................................................................................................................................................................................................26200.20400000040000000000
............................................................................................................................................................................................................................................................GGTATACGAGATTCGTTGAAA-------AGTT..........................................................................................................................................................25100.20200000002000000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTATGTAACAGGCAGA.............................................................................................................................................3450.20100000010000000000
.............................................................................CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------...................................................................................................................................................................................................................................................................23200.20400000000000004000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTA..........................................................................................................................................................21100.20200200000000000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------AGA...........................................................................................................................................................26110.18200000000002000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------AGT...........................................................................................................................................................2660.17100000000001000000
...................................................................................................................................................................................................................................................................GAGATTCGTTGAAA-------AGTATGTAACAGGC................................................................................................................................................2860.17100000001000000000
.................................................................................................................................................................................................................................................................ACGAGATTCGTTGAAA-------AGTATGTAACAGGC................................................................................................................................................3060.17100000000100000000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGACGAGTC.................................................................................2760.17100000000001000000
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGACGAGTCGAT..............................................................................2760.17100000000010000000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGACGAGT..................................................................................2660.17100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................GATCTAGCCATGTCCGTT...............................................................1860.17100000000001000000
.............................................................................CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------G.........................................................................................................................................................................................................................................................26200.15300000020010000000
...............................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTAGCCATG.....................................................................18200.15300000000003000000
..................AG-----------------TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------...................................................................................................................................................................................................................................................................28200.15300030000000000000
.....................................TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------...................................................................................................................................................................................................................................................................26200.15300000000030000000
..........................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGC......................................................................................................................................22200.15300000000003000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAG..................................................................................................................................................15200.15300000000003000000
...................................................................................................................................................................................................................................................................................................................................................AGGATCAATAGACGAGTCGATCT............................................................................2370.14100000000000010000
....................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGATCAATAGAC......................................................................................2870.14100000000010000000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGATCAATAGAC......................................................................................2670.14100000000010000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAAA-------AGTT..........................................................................................................................................................2770.14100000000010000000
..................................................................................................................................................................................................................................................................CGAGATTCGTTGAAA-------AGTATGTAAC....................................................................................................................................................2580.13100000000001000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGA.......................................................................................................................................................................2180.13100000000001000000
..........................................................................................................................................................................................................................................................AGGGTATACGAGATTCGTTGAA......................................................................................................................................................................2280.13100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTATG----AGC....................................1580.13100000000001000000
..............................................................................................................................................................................................................................................................TATACGAGATTCGTTGAAA-------AGTA..........................................................................................................................................................2380.13100000000001000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGA...........................................................................................................................................................20170.12200000020000000000
..................................................................................................................................................................................................................................................................CGAGATTCGTTGAAA-------AGTATGTAACAGC.................................................................................................................................................2890.11100000001000000000
.............................................................................................................................................................................................................................................................GTATACGAGATTCGTTGAAA-------AG............................................................................................................................................................2290.11100000001000000000
....................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGATCAATAGA.......................................................................................2790.11100000000100000000
...............................................................................................................................................................................................................................................................ATACGAGATTCGTTGAAA-------AG............................................................................................................................................................20100.10100000000001000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAACAGGCA...............................................................................................................................................24200.10200010000001000000
..............................................................................TGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GCCGT.....................................................................................................................................................................................................................................................29200.10200010000001000000
..........................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCGTTT..................................................................................................................................26200.10200000000002000000
...............................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTAGCCATGTCCGT................................................................23200.10200000001000010000
..................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCG.....................................................................................................................................15200.10200000000002000000
.............................................................................................................................................................................................................................................................................................................................TTAAGTATATATATTCTTGATCAGG................................................................................................25100.10100000000010000000
...........................................................................................................................................................................................................................................................GGGTATACGAGATTCGTTGAAA-------AGTAA.........................................................................................................................................................27100.10100000000010000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAG...........................................................................................................................................22200.10200000001000001000
.............................................................................................................................................................................................................................................................................................................................TTAAGTATATATATTCTTGATCAGGA...............................................................................................26100.10100000001000000000
................................................................................................................................................................................................................................................................TACGAGATTCGTTGAAA-------AGTAT.........................................................................................................................................................22100.10100000000010000000
...............................................................................................................................................................................................................................................................................................................................................GATCAGGATCAATAGACGAGT..................................................................................21100.10101000000000000000
.............................................................................................................................................................................................................................................................GTATACGAGATTCGTTG........................................................................................................................................................................17110.09100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................TCCTTCTGTCCGTATG----.......................................16110.09100000000001000000
............................................................................................................................................................................................................................................................GGTATACGAGATTCGTTGAA......................................................................................................................................................................20110.09100000000001000000
............................................................................................................................................................................................................................................................GGTATACGAGATTCGTTGAAA-------..............................................................................................................................................................21110.09100000000001000000
...................................................................................................................................................................................................................................................................GAGATTCGTTGAAA-------AG............................................................................................................................................................16120.08100000000001000000
............................................................................................................................................................................................................................................................GGTATACGAGATTCGTT.........................................................................................................................................................................17120.08100000000001000000
............................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAA........................................................................................................................................18200.05100000001000000000
.............................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGA.........................................................................................................................................16200.05100000000001000000
...............................................................................................................................................................................................................................................................................AA-------AGTATGTAACAGGCAGAAGGAAGCGTT...................................................................................................................................29200.05100000000001000000
..................................................................................................................................CAAACCAATGTA-------------------------------------TG-------GCCGTTA...................................................................................................................................................................................................................................................21200.05100000000001000000
...........................................................................................................................................................................................................................................................GGGTATACGAGATTCGA..........................................................................................................................................................................17200.05100000001000000000
..............................................................................................................................................................................................................................................................................AAA-------AGTATGTAACAGGCAGAAGGAAGC......................................................................................................................................27200.05100000000000010000
...................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGGATCAATA.........................................................................................26200.05100100000000000000
...................................................................................................................................AAACCAATGTA-------------------------------------TG-------GCCGTTACG.................................................................................................................................................................................................................................................22200.05100000010000000000
.............................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAG.......................................................................................................................................18200.05100010000000000000
..............................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCGTTTCCG...............................................................................................................................25200.05100000000010000000
............................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGAT......................................................................................20200.05100000000001000000
..................................................................................................................................CAAACCAATGTA-------------------------------------TG-------GCCGTTACGCA---............................................................................................................................................................................................................................................25200.05100000000010000000
...............................................................................................................................................................................................................................................................................AA-------AGTATGTAACAGGCAGAAGGAA........................................................................................................................................24200.05100000000100000000
..........................................................................................................................................................................................................................................................................GTTGAAA-------AGTATGTAACAGGCA...............................................................................................................................................22200.05100000001000000000
droSec2
ATTTTGGCCGTCACCAAAAG-----------------TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GCCGTTACGCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACTATATAAAGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTAGCCATGTCCGTTT--GTCCTTCTGTCCGTATG----AGCGTCT--------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....TGGCCGTCACCAAAAG-----------------TGG-------------------------------------CTG......................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................................................................................................................................................................................................GCA---T-----------CTTGTTAT-------------------------ACTAGGGTATACGA.................................................................................................................................................................................2611.0011000
.............................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCG.................................................................24200.2555000
..................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCGTTT--GTC.........................................................2590.2220110
................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCGTTT--GTC.........................................................2760.1711000
..................................................................................................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGATC.............................................................................................23200.1533000
..............................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTAGCCATGTCCGT................................................................24200.1533000
...........................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGT..................................................................................25200.1533000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCCGAGTC.................................................................................27200.1533000
................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCGTTT--............................................................2480.1311000
.................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATC.............................................................................................24200.1020002
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAACAGGC................................................................................................................................................23200.1020020
................................................................................C------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GC........................................................................................................................................................................................................................................................24200.1022000
...............................................................................GC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GCCGT.....................................................................................................................................................................................................................................................28200.1022000
...................................................................................................................................................................................TG-------GCCGTTACGCA---T-----------CTTGTT..........................................................................................................................................................................................................................20200.1022000
.......................................................................................................................................................................................................................................................................................................................................................................TCTAGCCATGTCCGTTT--GTCC........................................................21110.0911000
.......................................................................................................................................................................................................................................................................................................................................................................TCTAGCCATGTCCGTTT--GTC.........................................................20120.0810100
................................................................................................................................................................................................................................................................................................................................AGTATATATATTCTTGATCAGGAT..............................................................................................24200.0510010
...........................................................................................................................................GTA-------------------------------------TG-------GCCGTTACGCA---T-----------CTTG............................................................................................................................................................................................................................21200.0510001
.................................................................................................................................................................................................................................................................................................CAGGCAGAAGGAAGCGTTTCCGA..............................................................................................................................23200.0510100
........................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTAGCCATGTC...................................................................27200.0511000
................................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATAGCCGAGTCGA...............................................................................23200.0510100
.....................................TGG-------------------------------------CTGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------...................................................................................................................................................................................................................................................................26200.0511000
..................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCG.................................................................19200.0510010
.............................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCGT................................................................25200.0510100
...........................................................................................................................ATAGTGCCAAACCAATGTA-------------------------------------TG-------..........................................................................................................................................................................................................................................................21200.0510001
.................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATCTA...........................................................................26200.0510001
............................................................................................................................................................................................................................................................................................................AAGCGTTTCCGACTATATAAA.....................................................................................................................21200.0511000
.................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCG................................................................................21200.0510100
.......................................................................................................................................................................................................................................................................TTCGTTGAAA-------AGTATGTAACA...................................................................................................................................................21200.0510010
..................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCGAGTCGAT..............................................................................22200.0510001
........................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGAGT..................................................................................28200.0511000
..............................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCGTTTCC................................................................................................................................24200.0510001
..............................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCGT....................................................................................................................................20200.0510100
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGA...............................................................................26200.0511000
...........................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTC.................................................................................26200.0511000
........................................................................................................................................AATGTA-------------------------------------TG-------GCCGTTACGCA---T-----------C...............................................................................................................................................................................................................................21200.0511000
............................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTAGCCATGTCCGT................................................................26200.0510010
..............................................................................................................................................................................................................................................................................................................................AAAGTATATATATTCTTGATCA..................................................................................................22200.0511000
........................................................................................................................................AATGTA-------------------------------------TG-------GCCGTTACGCA---T-----------CT..............................................................................................................................................................................................................................22200.0511000
............................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCGTTT..................................................................................................................................24200.0510001
..............................................................................TGC------------------------------------------ATAGTGCCAAACCAATGTA-------------------------------------TG-------GC........................................................................................................................................................................................................................................................26200.0511000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGATCAATAGCCGAG...................................................................................29200.0510100
............................................................................................................................................TA-------------------------------------TG-------GCCGTTACGCA---T-----------CTTG............................................................................................................................................................................................................................20200.0511000
..................................................................................................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGATCA............................................................................................24200.0511000
droYak3
AACC-G----------GAGGATATTGCGG------------------------------------------------------AAAAAATT------GATTTG------------------------------TATCA--------------------TGG---A--------------TTT------------------------TA-----TATCTTTATACCCGTTACTCG---TA---GA-GTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCT--GTCCGTCCGTCTGTCTG----TCCGTCTGTCCGTCTGTCCGT--------CTGTCCGTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAGTAGCCGAGTCGATC.............................................................................28207.401480000000000148
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAGTAGCCGAGTCGA...............................................................................26202.5050000000000050
...............................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTCTGTCCGT--------CTG.......24200.9519019000000000
..........................................................................................................................................................................................................................................................................................................................................................................GGCCATGTCCGTCT--GTCCGTCCGTCT................................................26200.15303000000000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAGTAGCCGAG...................................................................................25200.15300000030000
...............................................................................................................................................................................................................................................................................................................CGTTTCCGACCATATAAAGTATATA..............................................................................................................25200.10200200000000
.................................................................................................................................................................................................................................................................................................................................................TCAGGATCAGTAGCCGAGTCG................................................................................21200.10200000020000
............................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCGTTT..................................................................................................................................24200.10200200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TG----TCCGTCTGTCCGTCTGTCCGT--------CTGTCCGT..31200.10200000000002
.......................................................................................................................................................................................................................................................................................................................................................................................................TCTG----TCCGTCTGTCCGTCTGTCCGT--------CT........27200.10202000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCT--GTCCGTCC....................................................21200.10200000020000
.......................................................................................................................................................................................................................TCTTTATACCCGTTACTCG---TA---GA-G................................................................................................................................................................................................24200.05101000000000
.......................................................................................................................................................................................................................................TCG---TA---GA-GTAAAAGGGTATACTAGATTCGT..........................................................................................................................................................................30200.05100000010000
......................................................................................................................................................................................................................................................................................................................................................ATCAGTAGCCGAGTCGATCTGGC.........................................................................23200.05100000100000
...............................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCT--GTC.........................................................28200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................AGTCGATCTGGCCATGTCCGTC...............................................................22200.05100010000000
.......................................................................................................................................................................................................................................................................................................................................................................TCTGGCCATGTCCGTCT--GTCCGTCCG...................................................26200.05100010000000
..................................................................................................................................................................................................................................................................................................................................................................................CCGTCT--GTCCGTCCGTCTGTCTG----TCCG...................................27200.05100000010000
..........................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAGTAGCCGAGC..................................................................................26200.05100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTG----TCCGTCTGTCCGTCTGTC.....................26200.05100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTG----TCCGTCTGTCCGTCTGTCC....................27200.05101000000000
........................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTATGTAACAGGCAGAA............................................................................................................................................27200.05100100000000
........................................................................................................................................................................................................................................................................................................................................................................CTGGCCATGTCCGTCT--GTCCGTCC....................................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G----TCCGTCTGTCCGTCTGTCCGT--------CT........24200.05100100000000
....................................................................................................................................................................................................................................................................................................................................................................................GTCT--GTCCGTCCGTCTGTCTG----TCCGTC.................................27200.05100100000000
....................................................................................................................................................................................................................................................................................................................CCGACCATATAAAGTATATATATTCTT.......................................................................................................27200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCT--GTCCGTCCGTCTG...............................................22200.05101000000000
.............................................................................................................................................................................................................................................TA---GA-GTAAAAGGGTATACTAGATTC............................................................................................................................................................................25200.05100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCCGTCTGTCTG----TCCGTCTGTC.............................26200.05100001000000
...........................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAGTAGCCGAGTC.................................................................................26200.05100000010000
droEre2
AATA-G----------GTGAAGACTCT----------TT------AGCACAT-----------------------------------------------------------------------GTTTTAAAAATTTA-----ACAAATT-------------TTCTATA----------AT-------TTAA-------TTT---AGCTTTGATTTAGTAATGTTAT--------TGCATATTGATGAAAAGCA-----------T-GTTGAA-------AGTATGTAACAGTTAGCAGGCAGCGTTTCCGACTCTA-------TATATATTCTTGATTAGAATCACTAGTCGAGATGATCTGGCCATGTCCGTTTTTGTCCGT----CCGTTTT----TCCGTCAGTTTGTCCGTCCGT--------TTTTCAGTGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
CCATGG-----------C-----CTGCGG------------------------------------------------------AAAAGAT------------------------------------TTCCTAGCCTAG--------------------TGT---A--------------TTTTGAA--------------------GA-----GATTTTTGTACCCGACACTCA---A-AATGA-GTATTGGGGTATATTAGATTTGTGGTAAAAGTGTATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCT--GTCCGTCCGTCCGTCTG----TCCGTCAGTCCGTCTGTACGT--------CCGTCCG---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGT.........................................................................................................................................................22202.304603110106430
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTG........................................................................................................................................................23201.8537020000013310
..................................................................................................................................................................................................................................................................................................................................................................GTCGATTGAGCCATGTCTGTC...............................................................21201.803603600000000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTG..........................................................................................................................................................21201.402802000007010
...................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCCGTCTGTACGT--------CCGTC.....2211.0010100000000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGT.......................................................................................................................................................24200.65130800004010
..........................................................................................................................................................................................................................................................................................................................................................................AGCCATGTCTGTCT--GTCCGTC.....................................................21200.601201200000000
.......................................................................................................................................................................................................................................TCA---A-AATGA-GTATTGGGGTATA....................................................................................................................................................................................22200.551101100000000
................................................................................................................................................................................................................................................................................................................................................................................................CCGTCCGTCTG----TCCGTCAGTCC............................2220.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCC........................................................................19200.4590900000000
...........................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCATG.....................................................................22200.4080800000000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTA......................................................................................................................................................25200.2550200002100
.............................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCT--GTCCGTCCGT..................................................21200.2550500000000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGT...........................................................................................................................................................20200.2040300000100
...........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCCGTCCGTCTG----TCCGTCA................................2350.2010100000000
.......................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCAT........................................................................................................................23200.2040000000400
........................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGTG........................................................................................................................................................22200.2040300001000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATG............................................................................................................................................................19200.2040200000020
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTAACG...................................................................................................................................................28200.1530300000000
............................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATTGAGCCATG.....................................................................21200.1530300000000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTAA.....................................................................................................................................................26200.1530300000000
..................................................................................................................................................................................................................................GACACTCA---A-AATGA-GTATTGGGGT.......................................................................................................................................................................................2470.1410100000000
............................................................................................................................................................................................................................................................................................................AATCGTTTCCGACCCCATAAAG....................................................................................................................22200.1020200000000
........................................................................................................................................................................................................................................................................................................................................................................TGAGCCATGTCTGTCT--GTCCGTC.....................................................23200.1020000200000
.................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTTTCC................................................................................................................................21200.1020000002000
........................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTG..........................................................................................................................................................20200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTGTCT--GTCCGTCCGTCCG...............................................20200.1020000000020
......................................................................................................................................................................................................................................CTCA---A-AATGA-GTATTGGGGTATATT..................................................................................................................................................................................25200.1020200000000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTA........................................................................................................................................................23200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCTGTCT--GT..........................................................22200.0510000010000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCT--GTCCGTCCGTCCGTCTG----.......................................26200.0510000000010
............................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCT--GTCCGTC.....................................................19200.0510001000000
..............................................................................................................................................................................................................................................................................TAAAAGTGTATGTGTGTAAC....................................................................................................................................................20200.0510100000000
........................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGTGT.......................................................................................................................................................23200.0510100000000
...............................................................................................................................................................................................................................................................ATATTAGATTTGTGGTAAAAGTG................................................................................................................................................................23200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................................GATTGAGCCATGTCTGTCT--GTCCGT......................................................25200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................AGTCGATTGAGCCATGTCTGT................................................................21200.0510000010000
...........................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCATGTCTG.................................................................26200.0510000000010
...........................................................................................................................................................................................................................................................................................................................................................................GCCATGTCTGTCT--GTCCGTC.....................................................20200.0510000001000
.................................................................................................................................................................................................................................................TGA-GTATTGGGGTATATTAGA...............................................................................................................................................................................21200.0510000010000
........................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGTATGTGTGTA......................................................................................................................................................24200.0510000001000
.....................................................................................................................................................................................................................................................................................................................................................................GATTGAGCCATGTCTGTC...............................................................18200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCT--GTCCGTCCGTCCG...............................................25200.0510000000100
........................................................................................................................................................................................................................................................................................................................................................................TGAGCCATGTCTGTCT--GTCCGT......................................................22200.0510010000000
.........................................................................................................................................................................................................................................................................................................................................................................GAGCCATGTCTGTCT--GTCCGTCC....................................................23200.0510100000000
..................................................................................................................................................................................................................................................................................AGTGTATGTGTGTAACGTCCA...............................................................................................................................................21200.0510100000000
..........................................................................................................................................................................................................................................................................GTGGTAAAAGTGTATGTGTGTAAC....................................................................................................................................................24200.0510000100000
...................................................................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTGT...............................................................................................................................................................20200.0510100000000
................................................................................................................................................................................................................................................................................AAAGTGTATGTGTGTAACGTC.................................................................................................................................................21200.0510000000010
.........................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTGTAACG...................................................................................................................................................26200.0510100000000
.........................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTGTAACGT..................................................................................................................................................27200.0510100000000
..................................................................................................................................................................................................................................................................TTAGATTTGTGGTAAAAGTGTATG............................................................................................................................................................24200.0510100000000
..................................................................................................................................................................................................................................................................................AGTGTATGTGTGTAACGTCC................................................................................................................................................20200.0510100000000
......................................................................................................................................................................................................................................................................ATTTGTGGTAAAAGTGTATGTGT.........................................................................................................................................................23200.0510100000000
.........................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTGT.......................................................................................................................................................22200.0510000100000
.......................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGTATGTGTGTAAAA...................................................................................................................................................28200.0510000001000
..........................................................................................................................................................................................................................................................................GTGGTAAAAGTGTATGTGT.........................................................................................................................................................19200.0510100000000
...................................................................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTGTA..............................................................................................................................................................21200.0510000001000
.........................................................................................................................................................................................................................................................................................................................................................AATAGCCGAGTCGATTGAGCCATGTCTG.................................................................28200.0510100000000
.........................................................................................................................................................................................................................................................................TGTGGTAAAAGTGTATGTGTG........................................................................................................................................................21200.0510000000100
droPer2
GAACTG--------------------CGG------------------------------------------------------AACAAATTAGGACT--ACTACAA---GAA----GAATG--ATTC---CAATTTA---------ATGCAATTTAT-TACATTA--------------ATT--CA--------------------TA-----TTTAATTATACCCGATACTCA---A-AATGA-GTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCT--GTCCGTCCGTCCGTCTG----TCCGTCTGTCCGTCCGTCCGT--------CTGTCCG---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................CCAGAAGGAATCGTTTCCG...............................................................................................................................19200.65130000013
................................................................................................................................................................................................................................................................TATTAGATTTGTGGTAAAAGTGG...............................................................................................................................................................23200.55110110000
.................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACGTC.................................................................................................................................................20200.204040000
...........................................................................................................................................................................................................................................................GGGTATATTAGATTTGTGGTAA.....................................................................................................................................................................22200.204040000
.....G--------------------CGG------------------------------------------------------AACAAATTAGGACT--ACTACA.............................................................................................................................................................................................................................................................................................................................................24200.153010002
..................................................................................................................................................................................................................................................................................AGTGGATGTGTGTAACGTC.................................................................................................................................................19200.153000030
.....G--------------------CGG------------------------------------------------------AACAAATTAGGACT--ACTAC..............................................................................................................................................................................................................................................................................................................................................23200.153210000
.............................................................................................................................................................................................................................................A-AATGA-GTATTGGGGTATAT...................................................................................................................................................................................20200.153030000
.............................................................................................GACT--ACTACAA---GAA----GAATG--ATT........................................................................................................................................................................................................................................................................................................................22200.102000002
...........................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGA....................................................................................23200.102002000
................................................................................................T--ACTACAA---GAA----GAATG--ATTC---CAATT...............................................................................................................................................................................................................................................................................................................25200.051010000
.....G--------------------CGG------------------------------------------------------AACAAATTAGGACT--ACTACAA---.........................................................................................................................................................................................................................................................................................................................................25200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................ATGTCTGTCT--GTCCGTCCG...................................................19200.051010000
.AACTG--------------------CGG------------------------------------------------------AACAAATTAGGACT--ACTA...............................................................................................................................................................................................................................................................................................................................................26200.051000001
......................................................................................................................................................................................................................................................................................................................................................................................................GTCTG----TCCGTCTGTCCGTCCGTCCGT--------..........26200.051000001
.....................................................................................................................................................................................................................................................................GATTTGTGGTAAAAGTGGA..............................................................................................................................................................19200.051010000
............................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCT--GTCCGTC.....................................................19200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCCGTCTG----TCCGTCTGT..............................22200.051100000
......................................................................................................................................................................................................................................................................................................AGAAGGAATCGTTTCCGAC.............................................................................................................................19200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................T--GTCCGTCCGTCCGTCTG----TCCG...................................22200.051100000
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGAT..............................................................................27200.051000001
droWil2
AAATTT----------GAAATCACTTT------------------GACTCACCTTATGATTGGGTTTGATTTACGAGA----------------------------------------------------------AATATT-------------------------------------CG-------AATA-------TTT---GAA-----ATCTATTATACCCT--------TGCA--------AAAAGGGTATATTAATTTTGGTCAGA-------AGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAGTATATATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCATGTCCGTCC--GTCCGTCCGTCCGTCCG----TCCGTCCGTCCGTCCGTCTGG--------ATCAACGCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................TCCGTCC--GTCCGTCCGTCCGT..............................................21200.40808000
....................................................................................................................................................................................................................................................................................................................................................................TCAAATAGCCATGTCCGTCC--GTC.........................................................23200.25500050
................................................................................................................................................................................................................................................................................................................................................................GAGTTCAAATAGCCATGTCCG.................................................................21200.20404000
......................................................................................................................................................................................................................................................................................................................................................................AAATAGCCATGTCCGTCC--GTC.........................................................21200.10200002
....................................................................................................................................................................................................................................................................AATTTTGGTCAGA-------AGTGTGC.......................................................................................................................................................20200.10200002
...........................................................................................................................................................................................................................................................................................................................................................................................TCCGTCCGTCCGTCCG----TCCG...................................20200.10200020
..................................................................................................................................................................................................................................................................TTAATTTTGGTCAGA-------AGTGTGCAACGCA.................................................................................................................................................28200.05100010
...............................................................................................................................................................................................................................................................................................................................................GATCAGCACGACGAGACGAG...................................................................................20200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................CGTCCGTCCGTCCG----TCCGTCCGTC.............................24200.05101000
.................................................................................................................................................................................................................................................................................................................................................TCAGCACGACGAGACGAGTTCAA..............................................................................23200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................CAAATAGCCATGTCCGTCC--GT..........................................................21200.05100100
.....................................................................................................................................................................................................................................................................................................TAGAAGGAAGCATCTCCGACCATATAA......................................................................................................................27200.05101000
..............................................................................................................................................................................................................................................................TATATTAATTTTGGTCAGA-------..............................................................................................................................................................19200.05101000
.....................................................................................................................................................................................................................................................................ATTTTGGTCAGA-------AGTGTGCAACGCATA...............................................................................................................................................27200.05100010
................................................................................................................................................................................................................................................................TATTAATTTTGGTCAGA-------AGTGTGCAACG...................................................................................................................................................28200.05100100
...................................................................................................................................................................................................................................................................................................................................................................TTCAAATAGCCATGTCCGTCC--G...........................................................22200.05100001
....................................................................................................................................................................................................................................................................AATTTTGGTCAGA-------AGTGTG........................................................................................................................................................19200.05101000
.............................................................................................................................................................................................................................................................................................................................................TTGATCAGCACGACGAGACG.....................................................................................20200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................CGTCCGTCCGTCCG----TCCGTCCGTCCGTC.........................28200.05101000
.................................................................................................................................................................................................................................................................................................................................................TCAGCACGACGAGACGAGTTCAAATAG..........................................................................27200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCC--GTCCGTCCGTCCGTC.............................................24200.05101000
..............................................................................................................................................................................................................................................................................................CAACGCATAGAAGGAAGCATCTCCG...............................................................................................................................25200.05100010
................................................................................................................................................................................................................................................................TATTAATTTTGGTCAGA-------AGTGT.........................................................................................................................................................22200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................CCGTCC--GTCCGTCCGTCCG...............................................19200.05100001
droVir3
CATGGA----------ATG--------------------------------------------------------------------------------------------------------ACGATGTCATCCCTGTACA-------------------------------------CG-------ACTG-------CAT---CAC-----CATTACTATACCCT--------TGCA---G-------AGGGTATTATAATTTTGTCGTGT-------AATGTGTAACGCATAGAAGGAGACATCTCCGACCCCATAAAGTATATATATTCTTAATCAGCATCAACAG-AGAGTCGATATAGCCACGTAGGTCT--GTCCGTCTGTCCGCCTG----TCCGTCT--------GTCTGT--------TTCTATGCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAACAG-A......................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................T-------AATGTGTAACGCATAGAAGGAG........................................................................................................................................2340.502000010000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................T-------AATGTGTAACGCATAGAAGG..........................................................................................................................................2150.402000000000000000000000000010000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................T-------AATGTGTAACGCATAGAAGGAGC.......................................................................................................................................2470.141000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAACA.........................................................................................23200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AATGTGTAACGCATAGAAGGAGAC......................................................................................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGACATCTCCGACCCCATAAAGT...................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................TAACGCATAGAAGGAGACATCT..................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AATGTGTAACGCATAGAAGGAGACA.....................................................................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGTAACGCATAGAAGGAGACA.....................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGTAACGCATAGAAGGAGACATCTC.................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AATGTGTAACGCATAGAAGGAGACATC...................................................................................................................................27200.051000000000000000000000000000000000000010000000000000000000000000
droMoj3
CACTAAGGCAGCACAAA------------------------------------------------------------------------------------------------------CC--GTATTATT---TTTA----TCAAATG-------------TGA--------------TTT-------------------------T-----TTTTATTATACCCTGAACCCATTGAATATGGGAAATCAGGGTATAATGGTTTTGT-TAAA-------AGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAACTATATATATTCCTGATCAGGGCGACGAGCGAAGTCGATTTGGCCCTGTCCGTCT--GTCTGTCTGTCCGTCCA----TCCGTCCCTCCGTCCGTCCGT--------ATGTAT--TASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................TTATTATACCCTGAACCCATT..........................................................................................................................................................................................................21200.102200000
........................................................................................................................................................................................................................................................................................................................................................................TTGGCCCTGTCCGTCT--GTCTGTCTGC..................................................26200.051000010
.............................................................................................................................................................................................................................TACCCTGAACCCATTGAATA.....................................................................................................................................................................................................20200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................CGTCT--GTCTGTCTGTCCGTCC............................................21200.051000010
droGri2
GAATCG----------ATCTAAACTAT-------------GTGCG------C-----------------------------GCAAGAATTA------GTTTTGTCTTAAGC-------TTTTT--------------------------------TTT-------TTTAATCGGGAA--GC-------TAATTT-------------T---GGCTTTCTTATACCCTGCACCCATTAAAAATGGGTAAAAAGGGTACAATGGTTTTGTGCAAA-------TGTATGTAACAGGCAGAAGCAAGTATCTCCGAACCCATAAAGTATATATATTCTTGATTATGGTCAACAAGCGAGTCGATATAGCCATCTTCGTCT--GTCCGTTTGTCCGTCCG----TCCGTCCGTACGTCCGTCCGT--------CTGTATGAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:31 PM