ID:

dan_368

 Coordinate:

scaffold_12903:489159-489309 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.4 -11.6

Flybase annnotation

CDS [Dana\GF15991-cds]; exon [dana_GLEANR_17087:3]; intron [Dana\GF15991-in]; Antisense to intron [Dana\GF15956-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAACAAGTGCGAATCACGTGCTCCTGCACCTGATCAATTGATAAGCGGATAATGCCACGCCCCCGTCACCAGCTGGGGGGATTCAAAAAAAAAAAAAAACAAAAAAAGCAGCGCCCAACATACACCTACACACACAGACACACACACACACACACACACAACCACACATCCATACAATGAAACAAGAACCTCTAAAC
****************************************************************......(((((...........(((....)))...........)).))).....************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 M044
female body
 V039
embryo
 V055
head
................................................................GAATCACGTGCTCCTGCACC....................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
....CTGGTGCCGCTACGGAAGTCGTCAG.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
.....................GTCGTCAGCAGGATCTGCGCAAGC.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................AAAAAAGAAAAAAAACAAAAAAAGCA....................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.................................................................................................AGCGGATAATGCCACGCCCCC..................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.......................................................................................TCAATTGATAAGCGGATAATG............................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.........GCCGCTACGGAAGTCGTCAGCA............................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.............CTACGGAAGTCGTCAGCAGGATCTGCG................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................AAAAAAAAAAACAAAAAAAGCA....................................................................................... 22 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................AAAAACCAAAAGAGCAGCGC................................................................................... 20 2 2 0.50 1 1 0 0 0 0
...................................................................................................................................................AAAAACCAAAAAAAGCAGCACC.................................................................................. 22 2 2 0.50 1 1 0 0 0 0
..........................CGACAGGATCTGCGCAAGC.............................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 1 0 0
..........................................................................................................................................ATAAAAGAAAAAAAACAAAAAAAGCA....................................................................................... 26 2 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................AACAAAAAAAGGCGCGCCCA................................................................................ 20 2 2 0.50 1 1 0 0 0 0
..................................................................................................................................................AAAAAACCAAAAAAAGCAGCCC................................................................................... 22 2 3 0.33 1 1 0 0 0 0
......................................................................................................................................................AAACAAAGAAAGCAGCGCAC................................................................................. 20 2 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................................................................ATACACACAACCCCACATCC.......................... 20 2 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................................................................CCACACAGCCATCCACTGAAAC.............. 22 3 5 0.20 1 0 0 0 1 0
....................................................................................................................................................AAAAAAATAAAAAGCAGCGCCCAC............................................................................... 24 3 5 0.20 1 1 0 0 0 0
.................................................................................................................................................AAAAAAACCAAAAAACGCAGCACC.................................................................................. 24 3 5 0.20 1 1 0 0 0 0
.............................................................................................................................................AAAAAAAAAAAACAAAAA............................................................................................ 18 0 20 0.15 3 3 0 0 0 0
..........................................................................................................................................AAAAAAAAAAAAAAACAAAAA............................................................................................ 21 0 20 0.15 3 3 0 0 0 0
.................................................................................................................................................AAAAAAAACAAAAAAAGCACCCC................................................................................... 23 2 7 0.14 1 1 0 0 0 0
.....................................................................................................................................................AAGACGAAAAAGGCAGCGCCC................................................................................. 21 3 8 0.13 1 1 0 0 0 0
....................................................................................................................................................AAAAACAGAAAAAGCAGCACC.................................................................................. 21 2 10 0.10 1 1 0 0 0 0
..........................................................................................................................................................AAAAAAAGCAGCGCCAACCA............................................................................. 20 2 12 0.08 1 1 0 0 0 0
...................................................................................................................................................ACTACACAAAAAAAGCAGCGC................................................................................... 21 3 14 0.07 1 1 0 0 0 0
.....................................................................................................................................................AAAACGAAGAAAACAGCGCCC................................................................................. 21 3 15 0.07 1 1 0 0 0 0
......................................................................................................................................................AAAAAAACAAAGCAGCGCC.................................................................................. 19 2 16 0.06 1 1 0 0 0 0
......................................................................................................................................................AAAAGAAAAAAGGAGCGCCCA................................................................................ 21 3 18 0.06 1 1 0 0 0 0
...........................................................................................................................................................AAAAAAGCGGCACCCACCAT............................................................................ 20 3 18 0.06 1 1 0 0 0 0
..........................................................................................................................................AAAAAAAAAAAAAAACAAAAAAA.......................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................AAAGAAAAAAACAAAAGAAGCA....................................................................................... 22 2 20 0.05 1 1 0 0 0 0
...............................................................................................................................................AAAAAAAAAACAAAGAAAGCA....................................................................................... 21 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................AAAAAAAAAAAACAAAAAAAG......................................................................................... 21 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................AAAAACCAAAAAAGAAGCG.................................................................................... 19 2 20 0.05 1 0 0 0 1 0
.....................................................................................................................................................AACAAAAAAAAAGCAGCGC................................................................................... 19 2 20 0.05 1 1 0 0 0 0
..................................................................................................................................................AAAAAAACAAAACGAGCAGAGC................................................................................... 22 3 20 0.05 1 1 0 0 0 0
.............................................................................................................................GATGGGGGGATTCCAAAAC........................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
..................................................................................................................................................AAAAAAACAAAAAAACCAGCAC................................................................................... 22 2 20 0.05 1 1 0 0 0 0
......................................................................................................................................................AAACAAAAAAAACAGCACCC................................................................................. 20 2 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

ACATGACCACGGCGATGCCTTCAGCAGTCGTCCTAGACGCGTTCGCTGTCCATTGTTGTTCACGCTTAGTGCACGAGGACGTGGACTAGTTAACTATTCGCCTATTACGGTGCGGGGGCAGTGGTCGACCCCCCTAAGTTTTTTTTTTTTTTTGTTTTTTTCGTCGCGGGTTGTATGTGGATGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTTGGTGTGTAGGTATGTTACTTTGTTCTTGGAGATTTG
*************************************************************************************************************************************......(((((...........(((....)))...........)).))).....**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V055
head
 V105
male body		 V106
head
 V039
embryo
..................................................................................................................................................................................................................GTGTTGGTGTGTAGGTATGT..................... 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................GGTGCGGGGGCAGTGGTCGAC.......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................TGTGTAGGTATGTTACTTTG.............. 20 0 1 1.00 1 1 0 0 0 0
..............ATGCCTTCAGCAGTCGTCCT......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...........................................................TCACGCTTAGTGCACGAGGAC........................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................GTGTGTGTGTGTGTGTTGGTGTG.............................. 23 0 1 1.00 1 0 0 1 0 0
.......................................CGTTCGCTGTCCATTGTTGT................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................TGTATGTCGATCTGTGTGTCTCT......................................................... 23 3 2 0.50 1 0 1 0 0 0
............................................................................GGACGTCGTCTAGCTAACTAT.......................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................TTGTTTGTGGATGGGTGTGACTGT......................................................... 24 3 3 0.33 1 0 1 0 0 0
.....................................................................................................................................................................................................TGTGTGTGTGTGTGTGTTGGT................................. 21 0 8 0.13 1 0 0 0 1 0
.............................................................................................................................................................................................................TGTGTGGATTGGTGTGAAGGT......................... 21 3 8 0.13 1 0 1 0 0 0
..............................................................................ACGTCGTCTAGCTAACTATT......................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0
............................................................................................................................................................................GTATGTCGATCTGTGGGTCTGT......................................................... 22 3 10 0.10 1 0 1 0 0 0
............................................................................................................................................................................................................GTGGGTATGTTGGTGTGAAGGT......................... 22 3 11 0.09 1 0 1 0 0 0
...........................................................................................................................................................................TGTATGTGGATGGGAGTGT............................................................. 19 2 12 0.08 1 0 1 0 0 0
........................................................................................................TTAGGGGGCCGGGGCAGTGG............................................................................................................................... 20 3 14 0.07 1 0 0 0 0 1
...........................................................................................................................................................................................................................TGTAGGTATATCACTTTGTG............ 20 3 16 0.06 1 0 1 0 0 0
.....................................................................................................................................................................................................................................TTACTTTGTTCTAGGAGTTTA. 21 3 17 0.06 1 0 0 1 0 0
....................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTTG................................... 20 0 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................................................GTGTCTGTGTGTGTGTGTGTGTG.......................................... 23 0 20 0.05 1 0 0 1 0 0
...........................................................................GGGACGTGGACTGGTTA............................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12903:489109-489359 + dan_368 TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAAC------AAGTGCGAATCACGTGCTCCTGCACCTGATCAATTGATAAGCGGATAATGCCA---CGCCCCCGTCACCAGCTG--GGG--GGATTCAAAA--AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAAAAGCAGCGCCCAACATACA------CCTACACACACAGACACACACACAC-----------------------------ACACACACACAACCACACAT---------------CCATAC-----AATGAAACA----------------------A-----GAACC------------------------------T-------------------------------------------------------------C--------------------------TAAA------------C
droBip1 scf7180000395952:53989-54202 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAAC------AAGTGCGAATCATGTGCTCCTGCACCTGATCAATTGATAAGCGGATAATGCCA---CGCCCCC-TCACCAGCAG--GGG--GGGGTTAA-A--AAA-----------AAAA--------------------------------------------------------------------------------------------------GCAACGCCCAACATAA-------------------------------------------------------------------------ACACACACACACACAACACAAATCCATAC-----ACTGAAACA----------------------A-----GAACC------------------------------T-------------------------------------------------------------C--------------------------TACA------------C
droKik1 scf7180000301542:306780-306967 + TCTATTGGTGTCGGTACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTACTGCACCTGATCAATTAATAGG---------CGGCGGAGCTCAGAC----AGCCA--GCAAA---------A-----------------AG----------------------------------------------------------------AAT----------------------------------------------AA-------------------------------------------------------------------------TTATATAT------------------------A-TATATATCGCC--GATTCGGAGACCAACATAATTGCCAATCC------------------------------T-------------------------------------------------------------C--------------------------TTAT------------C
droFic1 scf7180000454073:898521-898738 + TCTACTGGTGTCGATATGGGAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACCAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGAAGT---C---------AGCCG--GCAAA---------AAACAA-----------AAAAAATTCTACAAAAAAAAAAACAGAAATGAAGAAAAGAATGAAGGCCAGGAGCAAA----------------------------------------AAAAAA--------------------------------------------------------------------------------------------------------------------AGCA-CATGAAGCTCC--GACACAGAAACCCAAAT----------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491011:430995-431241 - TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAATTGATAA-GCGGAGC---CAAG-----AAGCCG--GATGC-----------------------------CGAAAGGCGA-------------------------------------AGAGCAAA-----------------------------------TGAA----ATA--------------------------------------------------------------------------------------------------------------------AGCGAAATGAAGCGCCGCGACACAGAAACCAAAAT--TTGCCAGTCCCACAAACCC---------------------------------------------------TC------------------TACCACCT---GATCCT---ACCAATCCAATTCAAAATCCAAA------------C
droRho1 scf7180000776513:17794-18029 + TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGGAGC---C---------AGCCG--GAAGC----------------------CGAAAAGCGAAAGGCCC-------------------------------------AGAGCAAA---------------------------------------------A--------------------------------------------------------------------------------------------------------------------AGCG-AATGAAGCACCGCGACACAGAAACCAAAAT--TTGCCACTCCCAC-----CT-CGCCA------------------------------------------ACTC------------------CTAATCCT---GCTCCT---ACCAATCCAATCCA--ATCCAAG------------C
droBia1 scf7180000302041:1147197-1147420 - TGTACTGGTGTCGATACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGGAGC---C---------AGCCG--GCGAA--------------------------AAGCGAAAGGCCC-------------------------------------AGAGCAAAAATTTAAAGAA-------A----------------CGA-AGAGATG--------------------------------------------------------------------------------------------------------------------TGCT-AATGACAAGCC--GACACAGAAACCAAAAT--TTGCCAC--C---------------------------------------------------------CACTC------------------CTCCTCCT---GATCCTC---------------------ACCT------------C
droTak1 scf7180000414562:72044-72281 + TCTACTGGTGTCGATACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGGAGC---C---------AGCCG--GCGAA---------A--AAA-----------AAGCGAAAGGCCC-------------------------------------GGAGCAAA-------AAAAAA-GAAAA----------------TGAA------A--------------------------------------------------------------------------------------------------------------------TGCT-AATGAAACGCC--GACACAGAAACCAAAAT--TTGCCACAACCAC-----CTACTCCT------------------------------------------GCTC------------------CTCTTCCT---GATCCTCCTGC-----------------TACT------------C
droEug1 scf7180000409008:511971-512158 - TCTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAG---------CGAAGC---C---------AGCGG--GCAAA---------A--AAAAAAAAATGCAAAAGCAAAAGGCTC-------------------------------------TGTGCAAAGACAAAAACAA-------A----------------ACAAAAAAGAA--------------------------------------------------------------------------------------------------------------------AGCG-AATGAAACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:14100342-14100444 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGAAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:13312169-13312271 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_20:704787-704977 - TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGTAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAACTGATAAGTCGAGC-CGAGGAGT---C-----------------------------------------------AAGCAAATGGCCGA------------------------------------GGAGAAA-------ATGAA-------A----------------TGAGAAATAGG--------------------------------------------------------------------------------------------------------------------AGCG-TTTGAAGCGCC--GACACTGAAACCCA------------TCC------------------------------T-------------------------------------------------------------T--------------------------TATC------------C
droYak3 X:8354098-8354280 - TTTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGTC-AGC-CGAGGAGT---C---------AGCCG--GCGAT---------A--ATA-----------TATCATCTGGCCCAGGAAAAAAT---------AGA-----------------------------GAAGA-------A----------------TGAGAAATAGA--------------------------------------------------------------------------------------------------------------------AGCG-ATTGAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:12830045-12830249 + TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGACTTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAG---------T--------C---------AGCCG--GCGAT----TG---A--ATG-----------GCTCATCTGGCCCAGGAAAAAAT-----------------------------------------GAGAA-------A----------------TGAGATATAGA--------------------------------------------------------------------------------------------------------------------GGCG-ATTGAAGCGCC--GACACAAAACCCA-------------TCC---------------------------------------------------------------------------------ATTTCCTGCTCC--------------------------TGCT------------C
dp5 XL_group1e:8447870-8447972 - TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGCAAGCGACAGGTAACGAC------GAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAA---------CGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_13:126208-126448 + TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGAAAGCGACAGGTAACGAC------GAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAA---------CGGAGC---A---------AGCAGCGGAGGC-----------------------------CATCT---------------------------------------------------------------------------------------------------------------------CCCACACACACACACACACACACACATAGAGAGAGAGAGAGAGAGAGAGAAGGAAAACACACATAAACACACATACACACA--------------CGCA-AAAGCAAAGAA--AAAAAAGAAACCAAAAC--ACA---------------------------------------------------------------------------------------------------------------------------------A------------C
droWil2 scf2_1100000004909:7107510-7107670 - TATATTGGTGTCGTTATGGTAGTCGTCAGCAGGATGTTCGCAAGCGACAGGTAACGAC------GAGTGCGAATCATGTGCTGCTGCATTTGATTAATTGATTT------------AA----------------T--------------------------------------------------------------------------------------------------------------------------------------------------CAACATACACAAACGCCCACACACACACACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAC------------------CTCATATA---CATACACATAC-----------------AAACA------------
droVir3 scaffold_12932:1917528-1917738 - dvi_9549 TCTATTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGAC------GAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAG---------CGATGGGA--CC------------------------------------------------TATATACTC---------------------------------------------------------T-------AGCTGTATATAGGTAGCAATATATTGT--------------------------------------------------------------------------------------------------------------------ATAA-TTCCAAATG--------------------------------------------------------------CCCGCCACACACACTAAAATCAAACACACACAC------------------A-CACGCA---CACACAC---------------------ACACA------------
droMoj3 scaffold_6473:5479198-5479418 - TGTACTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGAC------GAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAG---------CGACGC---ACC------------------------------------------------TATATACTC---------------------------------------------------------T-------AGCTGTATATAGGTAGTATCACATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-------TATATTCCAAATGCCCGCCACACACA-------------CACACACACAAACACACACACATAGACAACTAA---CATACACATGA-----------------ACACA------------
droGri2 scaffold_15081:4160153-4160351 - GA-------------------------------GTCAGTGGAAAGGTCACATGACAATAAAGTGAAATGCCCGCCTTGTGCCACTTAATTTGTTTAAAGCTCCCA------TTGCAA---AGTCTCGAGCAGCAGCTT--AAA--G--------------------------------------------------------------------------------------------AGTTT-----TG-----------CAGC---AAAAATTCACACCCTCCACACA------CACACACACACACACACACACACAC-----------------------------ACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACA---CACACACACGC-----------------ACACAGAGAGCGACAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAAC------AAGTGCGAATCACGTGCTCCTGCACCTGATCAATTGATAAGCGGATAATGCCA---CGCCCCCGTCACCAGCTG--GGG--GGATTCAAAA--AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAAAAGCAGCGCCCAACATACA------CCTACACACACAGACACACACACAC-----------------------------ACACACACACAACCACACAT---------------CCATAC-----AATGAAACA----------------------A-----GAACC------------------------------T-------------------------------------------------------------C--------------------------TAAA------------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................GAATCACGTGCTCCTGCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....CTGGTGCCGCTACGGAAGTCGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.....................GTCGTCAGCAGGATCTGCGCAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................AGCGGATAATGCCA---CGCCCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................TCAATTGATAAGCGGATAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.........GCCGCTACGGAAGTCGTCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............CTACGGAAGTCGTCAGCAGGATCTGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.............................................................................................................................................................AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAAAAGCA..........................................................................................................................................................................................................................................................................................................2220.501010000
..........................................................................................................................................................A--AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAA...............................................................................................................................................................................................................................................................................................................18200.153030000
.......................................................................................................................................................AAAA--AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAA...............................................................................................................................................................................................................................................................................................................21200.153030000
.......................................................................................................................................................AAAA--AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAAAA.............................................................................................................................................................................................................................................................................................................23200.051010000
..........................................................................................................................................................A--AAA-------------------------------------------------------------------A-------AAAAA-------A----------------ACAAAAAAAG............................................................................................................................................................................................................................................................................................................21200.051010000
droBip1
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACAAC------AAGTGCGAATCATGTGCTCCTGCACCTGATCAATTGATAAGCGGATAATGCCA---CGCCCCC-TCACCAGCAG--GGG--GGGGTTAA-A--AAA-----------AAAA--------------------------------------------------------------------------------------------------GCAACGCCCAACATAA-------------------------------------------------------------------------ACACACACACACACAACACAAATCCATAC-----ACTGAAACA----------------------A-----GAACC------------------------------T-------------------------------------------------------------C--------------------------TACA------------CSizeHit CountTotal NormTotal
No Reads
droKik1
TCTATTGGTGTCGGTACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTACTGCACCTGATCAATTAATAGG---------CGGCGGAGCTCAGAC----AGCCA--GCAAA---------A-----------------AG----------------------------------------------------------------AAT----------------------------------------------AA-------------------------------------------------------------------------TTATATAT------------------------A-TATATATCGCC--GATTCGGAGACCAACATAATTGCCAATCC------------------------------T-------------------------------------------------------------C--------------------------TTAT------------CSizeHit CountTotal NormTotal
No Reads
droFic1
TCTACTGGTGTCGATATGGGAGTCGTCAGCAGGATCTGCGCAAGCGACAGGTAACCAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGAAGT---C---------AGCCG--GCAAA---------AAACAA-----------AAAAAATTCTACAAAAAAAAAAACAGAAATGAAGAAAAGAATGAAGGCCAGGAGCAAA----------------------------------------AAAAAA--------------------------------------------------------------------------------------------------------------------AGCA-CATGAAGCTCC--GACACAGAAACCCAAAT----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAATTGATAA-GCGGAGC---CAAG-----AAGCCG--GATGC-----------------------------CGAAAGGCGA-------------------------------------AGAGCAAA-----------------------------------TGAA----ATA--------------------------------------------------------------------------------------------------------------------AGCGAAATGAAGCGCCGCGACACAGAAACCAAAAT--TTGCCAGTCCCACAAACCC---------------------------------------------------TC------------------TACCACCT---GATCCT---ACCAATCCAATTCAAAATCCAAA------------CSizeHit CountTotal NormTotal
No Reads
droRho1
TGTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGGAGC---C---------AGCCG--GAAGC----------------------CGAAAAGCGAAAGGCCC-------------------------------------AGAGCAAA---------------------------------------------A--------------------------------------------------------------------------------------------------------------------AGCG-AATGAAGCACCGCGACACAGAAACCAAAAT--TTGCCACTCCCAC-----CT-CGCCA------------------------------------------ACTC------------------CTAATCCT---GCTCCT---ACCAATCCAATCCA--ATCCAAG------------CSizeHit CountTotal NormTotal
No Reads
droBia1
TGTACTGGTGTCGATACGGGAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGGAGC---C---------AGCCG--GCGAA--------------------------AAGCGAAAGGCCC-------------------------------------AGAGCAAAAATTTAAAGAA-------A----------------CGA-AGAGATG--------------------------------------------------------------------------------------------------------------------TGCT-AATGACAAGCC--GACACAGAAACCAAAAT--TTGCCAC--C---------------------------------------------------------CACTC------------------CTCCTCCT---GATCCTC---------------------ACCT------------CSizeHit CountTotal NormTotal
No Reads
droTak1
TCTACTGGTGTCGATACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------CGGAGC---C---------AGCCG--GCGAA---------A--AAA-----------AAGCGAAAGGCCC-------------------------------------GGAGCAAA-------AAAAAA-GAAAA----------------TGAA------A--------------------------------------------------------------------------------------------------------------------TGCT-AATGAAACGCC--GACACAGAAACCAAAAT--TTGCCACAACCAC-----CTACTCCT------------------------------------------GCTC------------------CTCTTCCT---GATCCTCCTGC-----------------TACT------------CSizeHit CountTotal NormTotal
No Reads
droEug1
TCTACTGGTGTCGATATGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAG---------CGAAGC---C---------AGCGG--GCAAA---------A--AAAAAAAAATGCAAAAGCAAAAGGCTC-------------------------------------TGTGCAAAGACAAAAACAA-------A----------------ACAAAAAAGAA--------------------------------------------------------------------------------------------------------------------AGCG-AATGAAACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGAAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..TACTGGTGCCGCTACGGAAGTCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....TGGTGCCGCTACGGAAGTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010100100000
...................AAGTCGTCAGCAGGATCTGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........GCCGCTACGGAAGTCGTCAGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010000000
....CTGGTGCCGCTACGGAAGTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000
....................................................................................TGCACCTGATCAATTGATAAG---------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................AAGCGACAGGTAACGAC------GAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000
.....................................................................CCAATCACGTGCTGCTGCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGCAGGATCTGCGAAAGCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000
.....TGGTGCCGCTACGGAAGTCGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000
.......................CGTCAGCAGGATCTGCGAAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..TACTGGTGCCGCTACGGAAGTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGCCGCTACGGAAGTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000
................................................................................CTGCTGCACCTGATCAATTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CGAC------GAGTGCCAATCACGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000
...................................................TAACGAC------GAGTGCCAATCACGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CTACGGAAGTCGTCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................CAGCAGGATCTGCGAAAGCGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..TACTGGTGCCGCTACGGAAGTCGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......GTGCCGCTACGGAAGTCGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................GTCGTCAGCAGGATCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................TCAGCAGGATCTGCGAAAGCGACAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................GTCAGCAGGATCTGCGAAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GCCAATCACGTGCTGCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAACGAC------GAGTGCCAATCACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............TACGGAAGTCGTCAGCAGGATCTGCGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCAGCAGGATCTGCGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................ACGTGCTGCTGCACCTGATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTACTGGTGCCGCTACGGAAGTCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCACCTGATCAATTGATAAC---------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......GTGCCGCTACGGAAGTCGTCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................AAGTCGTCAGCAGGATCTGCGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTGGTGCCGCTACGGAAGTCGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............CTACGGAAGTCGTCAGCAGGATCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGCAGGATCTGCGAAAGCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCGAAAGCGACAGGTAACGAC------GAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................GCGAAAGCGACAGGTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCGACAGGTAACGAC------GAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........GCCGCTACGGAAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........GCCGCTACGGAAGTCGTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTACTGGTGCCGCTACGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGTGCCGCTACGGAAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................CAGCAGGATCTGCGAAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCAGGATCTGCGAAAGCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................AGCGACAGGTAACGAC------GAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................GAC------GAGTGCCAATCACGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGTGCCGCTACGGAAGTCGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......GGTGCCGCTACGGAAGTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................CGAAAGCGACAGGTAACGAC------GAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................TGCGAAAGCGACAGGTAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGTGCCGCTACGGAAGTCGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................AC------GAGTGCCAATCACGTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCACCTGATCAATTGATAAG---------TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................TCAGCAGGATCTGCGAAAGCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GTCGTCAGCAGGATCTGCGAAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................TCACGTGCTGCTGCACCTGATCAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAGTCGTCAGCAGGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................GAAGTCGTCAGCAGGATCTGCGAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCAGCAGGATCTGCGAAAGCGACAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......GTGCCGCTACGGAAGTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.GTACTGGTGCCGCTACGGAAGTCGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCTACGGAAGTCGTCAGCAGGATCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................C------GAGTGCCAATCACGTGCTGCTGCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....CTGGTGCCGCTACGGAAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAG---------TCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............CTACGGAAGTCGTCAGCAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
................CGGAAGTCGTCAGCAGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..............................AGGATCTGCGGAAGCGACAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
..................................................................GTGCCAATCACGTGCTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
..........................................AGCGACAGGTAACGAC------GAGTGCCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
............................GCAGGATCTGCGGAAGCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
droSec2
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGTAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAACTGATAAGTCGAGC-CGAGGAGT---C-----------------------------------------------AAGCAAATGGCCGA------------------------------------GGAGAAA-------ATGAA-------A----------------TGAGAAATAGG--------------------------------------------------------------------------------------------------------------------AGCG-TTTGAAGCGCC--GACACTGAAACCCA------------TCC------------------------------T-------------------------------------------------------------T--------------------------TATC------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CAGCAGGATCTGCGTAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.......................................................................AATCACGTGCTGCTGCACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.......GTGCCGCTACGGAAGTCGTCAGCAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
..................................................................................................................................................................................................................................AA-------ATGAA-------A----------------TGAGAAATAGG--------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................1911.0010001
droYak3
TTTACTGGTGCCGCTACGGAAGTCGTCAGCAGGATCTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCACGTGCTGCTGCACCTGATCAATTGATAAGTC-AGC-CGAGGAGT---C---------AGCCG--GCGAT---------A--ATA-----------TATCATCTGGCCCAGGAAAAAAT---------AGA-----------------------------GAAGA-------A----------------TGAGAAATAGA--------------------------------------------------------------------------------------------------------------------AGCG-ATTGAAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................AACGAC------GAGTGCCAATCACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................................................................................GAT---------A--ATA-----------TATCATCTGGCCCAGGA..................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................................................................................................................................................................................................................................................A----------------TGAGAAATAGA--------------------------------------------------------------------------------------------------------------------AGCG-ATTGA.............................................................................................................................................................................2111.00100000010000
.......................................................................................................AGTC-AGC-CGAGGAGT---C---------AGCCG--GCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........CGCTACGGAAGTCGTCAGCAGGATCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...................................................................................................GATAAGTC-AGC-CGAGGAGT---C---------AGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................GTCAGCAGGATCTGCGGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................................................................................................AAGTC-AGC-CGAGGAGT---C---------AGCCG--GCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.......................................................................................................................................................................................................................................................A----------------TGAGAAATAGA--------------------------------------------------------------------------------------------------------------------AGCG-ATTGAAG...........................................................................................................................................................................2311.00100000010000
..............................AGGATCTGCGGAAGCGACAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........................................AGCGACAGGTAACGAC------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000010000
................................GATCTGCGGAAGCGACAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................AGGATCTGCGGAAGCGACAGGTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................................................................................................TAAGTC-AGC-CGAGGAGT---C---------AGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................ATTGATAAGTC-AGC-CGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................CGTCAGCAGGATCTGCGGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...................................................................................................GATAAGTC-AGC-CGAGGAGT---C---------AGCCG--GCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.........................................AAGCGACAGGTAACGAC------GAGTGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEre2
TGTACTGGTGCCGCTACGGAAGTCGTCAGCAGGACTTGCGGAAGCGACAGGTAACGAC------GAGTGCCAATCATGTGCTGCTGCACCTGATCAATTGATAAG---------T--------C---------AGCCG--GCGAT----TG---A--ATG-----------GCTCATCTGGCCCAGGAAAAAAT-----------------------------------------GAGAA-------A----------------TGAGATATAGA--------------------------------------------------------------------------------------------------------------------GGCG-ATTGAAGCGCC--GACACAAAACCCA-------------TCC---------------------------------------------------------------------------------ATTTCCTGCTCC--------------------------TGCT------------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................AGCAGGACTTGCGGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..............TACGGAAGTCGTCAGCAGGACTTGCGGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000001
..............................................................................................CAATTGATAAG---------T--------C---------AGCCG--GC................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................G-ATTGAAGCGCC--GACACAAAA............................................................................................................................................................2111.0010000100
..............................AGGACTTGCGGAAGCGACAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............................................................................................CAATTGATAAG---------T--------C---------AGCCG--G.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................................................................................A-------A----------------TGAGATATAGA--------------------------------------------------------------------------------------------------------------------GGCG-ATTGAAGCGC........................................................................................................................................................................2711.0010000100
................................GACTTGCGGAAGCGACAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................T-----------------------------------------GAGAA-------A----------------TGAGATATAGA--------------------------------------------------------------------------------------------------------------------GGC....................................................................................................................................................................................2111.0010000100
dp5
TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGCAAGCGACAGGTAACGAC------GAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAA---------CGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GTACGGTAGCCGCCAGCAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.GTACTGGTGCCGGTACGGTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................AGCCGCCAGCAGGATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................AGCGACAGGTAACGAC------GAGTGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
..................................................................................GCTCCATCTGATTAACTGATAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................CGCCAGCAGGATGTCCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
TGTACTGGTGCCGGTACGGTAGCCGCCAGCAGGATGTCCGAAAGCGACAGGTAACGAC------GAGTGCTAATCACGTGCTGCTCCATCTGATTAACTGATAAA---------CGGAGC---A---------AGCAGCGGAGGC-----------------------------CATCT---------------------------------------------------------------------------------------------------------------------CCCACACACACACACACACACACACATAGAGAGAGAGAGAGAGAGAGAGAAGGAAAACACACATAAACACACATACACACA--------------CGCA-AAAGCAAAGAA--AAAAAAGAAACCAAAAC--ACA---------------------------------------------------------------------------------------------------------------------------------A------------CSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................CGAAAGCGACAGGTAACGAC------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................TAAA---------CGGAGC---A---------AGCAGCGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................ATCACGTGCTGCTCCATCTGATTAACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................................................................................................................................................................................................................................................................ATAGAGAGAGAGAGAGAGAGA........................................................................................................................................................................................................................................21200.051001000
droWil2
TATATTGGTGTCGTTATGGTAGTCGTCAGCAGGATGTTCGCAAGCGACAGGTAACGAC------GAGTGCGAATCATGTGCTGCTGCATTTGATTAATTGATTT------------AA----------------T--------------------------------------------------------------------------------------------------------------------------------------------------CAACATACACAAACGCCCACACACACACACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAC------------------CTCATATA---CATACACATAC-----------------AAACA------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............GTTATGGTAGTCGTCAGCAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
...........................AGCAGGATGTTCGCAAGCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
............GTTATGGTAGTCGTCAGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
......................................CGCAAGCGACAGGTAACGAC------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...ATTGGTGTCGTTATGGTAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.........GTCGTTATGGTAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................AGGATGTTCGCAAGCGACAGGTAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.ATATTGGTGTCGTTATGGTAGTCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
..........................CAGCAGGATGTTCGCAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...............ATGGTAGTCGTCAGCAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........................................AGCGACAGGTAACGAC------GAGTGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
.....TGGTGTCGTTATGGTAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...........CGTTATGGTAGTCGTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...ATTGGTGTCGTTATGGTAGTCGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
droVir3
TCTATTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGAC------GAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAG---------CGATGGGA--CC------------------------------------------------TATATACTC---------------------------------------------------------T-------AGCTGTATATAGGTAGCAATATATTGT--------------------------------------------------------------------------------------------------------------------ATAA-TTCCAAATG--------------------------------------------------------------CCCGCCACACACACTAAAATCAAACACACACAC------------------A-CACGCA---CACACAC---------------------ACACA------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................CAACTGATAAG---------CGATGGGA--CC------------------------------------------------TATAT...........................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000200000000000000000000000000
.CTATTGGTGCCGTTACGGCAGTCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.....TGGTGCCGTTACGGCAGTCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................AGTCGCCAGCAGGATGTGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................CAACTGATAAG---------CGATGGGA--CC------------------------------------------------TATATA..........................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................ATCAACTGATAAG---------CGATGGGA--CC------------------------------------------------TAT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................AAGCGACAGGTAACGAC------GAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
............................................................................................ATCAACTGATAAG---------CGATGGGA--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................AACGAC------GAGTGCGAATCACGTGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................GATAAG---------CGATGGGA--CC------------------------------------------------TATAT...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.......GTGCCGTTACGGCAGTCGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................CAGCAGGATGTGCGCAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................AACTGATAAG---------CGATGGGA--CC------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................CGCAAGCGACAGGTAACGAC------GAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................CAACTGATAAG---------CGATGGGA--CC------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
....................................................................................TGCATTTGATCAACTGATAAG---------CGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACACACAC------------------A-CACGCA---C............................................21200.051000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACACACAC------------------A-CACGCA---CACACAC---------------------A................27200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGTACTGGTGCCGTTACGGCAGTCGCCAGCAGGATGTGCGCAAGCGACAGGTAACGAC------GAGTGCGAATCACGTGCTGCTGCATTTGATCAACTGATAAG---------CGACGC---ACC------------------------------------------------TATATACTC---------------------------------------------------------T-------AGCTGTATATAGGTAGTATCACATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-------TATATTCCAAATGCCCGCCACACACA-------------CACACACACAAACACACACACATAGACAACTAA---CATACACATGA-----------------ACACA------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................C---------------------------------------------------------T-------AGCTGTATATAGGTAGTATCACATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT................................................................................................................................2911.001100000
......................................................CGAC------GAGTGCGAATCACGTGCTGCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......................................................................................ATTTGATCAACTGATAAG---------CGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
.............................CAGGATGTGCGCAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................................................................................CTC---------------------------------------------------------T-------AGCTGTATATAGGTAGTATCAC................................................................................................................................................................................................................................................................................................................2611.001100000
...........................AGCAGGATGTGCGCAAGCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................GAATCACGTGCTGCTGCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................TGATCAACTGATAAG---------CGACGC---ACC------------------------------------------------TAT.............................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................ATACTC---------------------------------------------------------T-------AGCTGTATATAGGTAGT.....................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................GACAGGTAACGAC------GAGTGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
GA-------------------------------GTCAGTGGAAAGGTCACATGACAATAAAGTGAAATGCCCGCCTTGTGCCACTTAATTTGTTTAAAGCTCCCA------TTGCAA---AGTCTCGAGCAGCAGCTT--AAA--G--------------------------------------------------------------------------------------------AGTTT-----TG-----------CAGC---AAAAATTCACACCCTCCACACA------CACACACACACACACACACACACAC-----------------------------ACACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACA---CACACACACGC-----------------ACACAGAGAGCGACAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 10:11 PM