ID:

dan_355

 Coordinate:

scaffold_12902:392916-393066 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.5 -6.1

Flybase annnotation

intron [Dana\GF20147-in]; exon [dana_GLEANR_227:2]; CDS [Dana\GF20147-cds]; intron [Dana\GF20147-in]

No Repeatable elements found

mature
  1. scaffold_4950:69-95 +
  2. scaffold_7838:2616-2642 +
  3. scaffold_10082:10363-10389 +
  4. dan_355  scaffold_12902:393034-393060 +
  5. scaffold_12911:931973-931999 +
  6. scaffold_12911:951081-951107 +
  7. scaffold_12911:988160-988186 +
  8. scaffold_13043:171534-171560 +
  9. scaffold_13043:195056-195082 +
  10. scaffold_13065:45990-46016 +
  11. scaffold_13082:565404-565430 +
  12. scaffold_13099:1395235-1395261 +
  13. scaffold_13124:61886-61912 +
  14. scaffold_13230:71642-71668 +
  15. scaffold_13230:1702980-1703006 +
  16. scaffold_13250:3095108-3095134 +
  17. scaffold_13260:1435103-1435129 +
  18. scaffold_13280:599077-599103 +
  19. scaffold_13417:3150183-3150209 +
  20. scaffold_13770:401760-401786 +
star
  1. scaffold_1353:1172-1198 +
  2. scaffold_7593:956-982 +
  3. scaffold_9070:47371-47397 +
  4. scaffold_9368:6180-6206 +
  5. scaffold_9723:33033-33059 +
  6. scaffold_12671:54630-54656 +
  7. dan_355  scaffold_12902:393001-393027 +
  8. scaffold_12966:39006-39032 +
  9. scaffold_13082:565371-565397 +
  10. scaffold_13082:3692902-3692928 +
  11. scaffold_13165:290920-290946 +
  12. scaffold_13230:1702947-1702973 +
  13. scaffold_13258:1226787-1226813 +
  14. scaffold_13260:1435070-1435096 +
  15. scaffold_13280:379243-379269 +
  16. scaffold_13282:195355-195381 +
  17. scaffold_13417:2938446-2938472 +
  18. scaffold_13469:470336-470362 +
  19. scaffold_13469:582359-582385 +
  20. scaffold_13770:744672-744698 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######################################------------
ACAGATATTACCGGAATCGGCCCAGAGGCCGGAATCATCAATATCAGTGATAAGAATATTTGACATTCCTCTCTTTATCTTAAAGCGGACGGACGTGTTTTTTTTGTGCGCACTACGTTTTTGTAAAATTTGCAATAAGCTTTCTATAAACAATCGGTGTTTATTTCTTTACTGATATAAAAACAAATTGCAATTTTTTAGATCCGTATCGCTTCGCGTGTGCAGTGATATATTTGGAGGTAAAATAATTT
***************************************************************************************************************************************...............((((..((.(((((.((......)).))))).))..)))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V055
head
 V039
embryo
 V105
male body		 V106
head
..........................................................................................................................................................................................................TCCGTATCGCTTCGCGTGTGCAGT......................... 24 0 20 0.25 5 0 5 0 0 0 0
..........................................................................................................................................................................................................TCCGTATCGCTTCGCGTGTGCAGTGA....................... 26 0 20 0.20 4 0 4 0 0 0 0
......................................................................................................................................................................................................TAGATCCGTATCGCTTCGCGTGTGCA........................... 26 0 20 0.20 4 0 4 0 0 0 0
........................................................................................................................................................................TTACTGATATAAAAACAAATTGCAATT........................................................ 27 0 20 0.20 4 4 0 0 0 0 0
...........................................................................................................................................................................................TTGCAATTTTTTAGATCCGTATCGCT...................................... 26 0 20 0.15 3 3 0 0 0 0 0
..............................................................................................................................................................................................................................CAGTGATATATTTGGAGGTAAAATAATT. 28 0 20 0.15 3 3 0 0 0 0 0
.CAGATATTACCCGATTCAGC...................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 1 0 0 0
................................................................................................................................................................................................................TCGCTTCGCGTGTGCAGTGATATATT................. 26 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................................................TAAGCTTTCTATAAACAATCGGTGTTT......................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
.............................................................................TCTTAAAGCGGACGGACGTGTTTTTT.................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................................................GCTTTCTATAAACAATCGGTGTTTA........................................................................................ 25 0 20 0.10 2 0 0 0 0 0 2
..................................................................................................................................................................................................TTTTTAGATCCGTATCGCTTCGCGTG............................... 26 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................................................................TTGCAATTTTTTAGATCCGTATCGC....................................... 25 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................................................................................................................TTTTTTAGATCCGTATCGCTTCGCGT................................ 26 0 20 0.10 2 1 0 0 0 1 0
....................................................................................................TTTTTGTGCGCACTACGTTTTTGTA.............................................................................................................................. 25 0 20 0.10 2 0 2 0 0 0 0
.......................................................................TCTTTATCTTAAAGCGGACGGA.............................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................TTTGTGCGCACTACGTTTTTGTAAAA........................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................AGTGATATATTTGGAGGTAAAATAA... 25 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................TTCGCGTGTGCAGTGATATATTTGGA............. 26 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................ATCGGTGTTTATTTCTTTACT.............................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................TTTTAGTGATATAAAAAC................................................................... 18 2 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................TGGCAATTTTTTAGATCCGTATCGCT...................................... 26 1 20 0.05 1 1 0 0 0 0 0
..........................................................................TTATCTTAAAGCGGACGGACGT........................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................................................................TTAGATCCGTATCGCTTCGCGT................................ 22 0 20 0.05 1 0 0 0 1 0 0
...................................................................................................TTTTTTGTGCGCACTACGTTTTTGT............................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.......................................................................TCTTTATCTTAAAGCGGACGGACGT........................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................CTTTCTATAAACAATCGGTGT........................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................CGACTGATATAAAAACAAATTGCAATT........................................................ 27 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................TTTTTAGATCCGTATCGCTTCGCG................................. 24 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................CAATTTTTTAGATCCGTATCGCC...................................... 23 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................TTGTAAAATTTGCAATAAGCTTTCTATA....................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................GCAGTGATATATTTGGAGGTAA........ 22 0 20 0.05 1 0 1 0 0 0 0
.............................................................................TCTTAAAGCGGACGGACGTG.......................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
................................................................................TAAAGCGGACGGACGTGTTTTTTTTGTG............................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................TTTACTGATATAAAAACAAATTGCAATT........................................................ 28 0 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................AGATCCGTATCGCTTCGCGTGTGC............................ 24 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................TTTTTTAGTTCCGTATCGCTTCGCGTGTG............................. 29 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................................................TAGATCCGGATCGCTTCGCGTGTGCAGT......................... 28 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................TTTTTATAAACAATCGGTGTTTATT...................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................GCTTTCTATAAACAATCGGTGTTT......................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................CGCGTGTGCAGTGATATATTTGG.............. 23 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................AAACAATCGGTGTTTATTTCTTTACTGA............................................................................ 28 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

TGTCTATAATGGCCTTAGCCGGGTCTCCGGCCTTAGTAGTTATAGTCACTATTCTTATAAACTGTAAGGAGAGAAATAGAATTTCGCCTGCCTGCACAAAAAAAACACGCGTGATGCAAAAACATTTTAAACGTTATTCGAAAGATATTTGTTAGCCACAAATAAAGAAATGACTATATTTTTGTTTAACGTTAAAAAATCTAGGCATAGCGAAGCGCACACGTCACTATATAAACCTCCATTTTATTAAA
********************************************************...............((((..((.(((((.((......)).))))).))..)))).....*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
.........................................................................................................................................TCGAAAGATATTTGTTAGCCACAAAT........................................................................................ 26 0 20 0.65 13 13 0 0
.............................................................................AGAATTTCGCCTGCCTGCACAAAA...................................................................................................................................................... 24 0 20 0.40 8 8 0 0
.....................................................................................................................................................................................TTGTTTAACGTTAAAAAATCTAGGCAT........................................... 27 0 20 0.30 6 6 0 0
.........................................................................................................CACGCGTGATGCAAAAACATTTTAA......................................................................................................................... 25 0 20 0.20 4 4 0 0
.........................................................................AAATAGAATTTCGCCTGCCTGCACAAA....................................................................................................................................................... 27 0 20 0.15 3 3 0 0
...........GCCTTAGCCTGGTCCCCGGG............................................................................................................................................................................................................................ 20 3 8 0.13 1 0 1 0
.............................................................................................GCACAAAAAAAACACGCGTGATGCAAAA.................................................................................................................................. 28 0 20 0.10 2 0 2 0
...................................................................................TCGCCTGCCTGCACAAAAAAAACACGC............................................................................................................................................. 27 0 20 0.10 2 2 0 0
........................................................................................................................................................CAGCCACAAATAAAGAAATGACTATAT........................................................................ 27 1 20 0.10 2 2 0 0
...........................................................................................................................................................................................................GGCATAGCGAAGCGCACACGTC.......................... 22 0 20 0.10 2 2 0 0
.......................................................................................................................................................TTAGCCACAAATAAAGAAATGACT............................................................................ 24 0 20 0.05 1 1 0 0
....................................................................................................................................GTTATTCGAAAGATATTTGTTAGCCAC............................................................................................ 27 0 20 0.05 1 0 0 1
..................................................................................................................................ACGTTATTCGAAAGATATTTGTTAGCCAC............................................................................................ 29 0 20 0.05 1 0 1 0
.......................................................................................................................................................................................................................CGCACACGTCACTATATAAACCTC............ 24 0 20 0.05 1 0 1 0
.......................................................................................................................................................................................................CCTAGGCATAGCGAAGCGCACACGT........................... 25 1 20 0.05 1 1 0 0
.............................................................................................................CGTGATGCAAAAACATTTTAAACGTCAT.................................................................................................................. 28 1 20 0.05 1 1 0 0
..................................................................................................................................ACGTTATTCGAAAGATATTTGTTAGCGA............................................................................................. 28 1 20 0.05 1 1 0 0
......................................................................................................................................................................................TGTTTAACGTTAAAAAATCTAGGCATAG......................................... 28 0 20 0.05 1 1 0 0
.............................................................................AGAATTTCGCCTGCCTGCACAAAAAAAA.................................................................................................................................................. 28 0 20 0.05 1 1 0 0
.....................................................................................................AAAACACGCGTGATGCAAAAACATTGT........................................................................................................................... 27 1 20 0.05 1 1 0 0
.......................................................................................................................................................TTAGCCACAAATAAAGAAAT................................................................................ 20 0 20 0.05 1 1 0 0
...............................................................................................................................................................................................................TAGCGAAGCGCACACGTCACTAT..................... 23 0 20 0.05 1 1 0 0
....................................................................................................................................................TTGTTAGCCACAAATAAAGAAATGAC............................................................................. 26 0 20 0.05 1 0 1 0
...................................................................GGAGAGAAATAGAATTTCGCCTGCCT.............................................................................................................................................................. 26 0 20 0.05 1 1 0 0
..........................................................................................................................CATTTTAAACGTTATTCGAAAG........................................................................................................... 22 0 20 0.05 1 1 0 0
................................................................TAAGGAGAGAAATAGAATTT....................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
...........................................................................................................................................................CCACAAAAAAAGCAATGACTATATTTT..................................................................... 27 2 20 0.05 1 1 0 0
.......................................................................AGAAATAGAATTTCGCCTGCCTGCAC.......................................................................................................................................................... 26 0 20 0.05 1 0 1 0
..................................................................................................................................................................................................................CGAAGCGCACACGTCACTATATAAA................ 25 0 20 0.05 1 0 0 1
................................................................................................................................................................................................TAAAAAATCTAGGCATAACGAAGCGC................................. 26 1 20 0.05 1 0 1 0
.........................................................................................................................................................................................................TAGGCATAGCGAAGCGCAGACGTCACT....................... 27 1 20 0.05 1 0 1 0
..................................................................................................................................................................................................................................CTATATAAACCTCCATTTTA..... 20 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12902:392866-393116 + dan_355 ACA-GATATTACCGGAATCGG------CCCAGAGGCCGGAATCATCAATATCAG----------------------TGATAAGAATATTTG-----------------------------------ACATTCCTCTCT-TTATCTTAAAGCGGACGGACGTGTTTTTTT--TGTGCGCAC--TACGTTTTTGTAAAATTTGCAATAAGCTT-----------------------------------------------------TCTA--TAA-ACAA-TCGGTGTTTATT---------------------TCTTTACT-GATAT-AAA----A----ACAAATTGC---------------AATT----------TTTTAGA-TCCGTATCG-CTTCGCGTGTGCAG---TGATATATT-TGGAGGTAA-AA-TA--------ATTT
droBip1 scf7180000394897:9459-9678 + AGG-CC-------------T------------------GAAGTAGTCAGATCAG----------------------TA----------AGAAACAT----------GAAGAGTC------------AGATTCTTTCTCTT-CCTCTTAAGCGAACGGTCGTGTTTTTTA--TGTGCGCAC--TGCGTTTATTA---------TAA--ATAT-----------------------------------------------------TGC-CGTAA----G-CCGGTGTTTACT---------------------AATTTAAG-AATAGAACTTTGAGA------AATTTCAGTTTA-----------------------TCCTAAA-TC-GTATCG-CTTCGCGTGTGCTG---TGGTATATT-TGGAGGCGA-AT-CA--------AGAA
droKik1 scf7180000297954:9452-9638 + AGA-TT-------------G--------------------------------------------------------------------AAATCA-------CCGGTGACAATAAGA------------ATTC-AATTCTT-CCTTCAAAGTGAACGGACGTGTTTTTTT--CTTGCGCTC--CCGATTTGTGT------------AGAATT-----------------------------------------------------TGTCTGAAA-ACCT-CCGGGGTTTACT-------------------------------------------AACATTTAA----T-----ATT----------TGGTGTTTCTAA-TAATT-CCCGT-TCA-CCTCGCGTGTGCA-TG---TTAC-TTTT--------------TTATTT---TGT
droFic1 scf7180000448786:10286-10481 - GAA-GT-------------GATCCAGGGAGCGC------AAT------------C---------------------------------AAAGATAC----------TGAGAACAA--------TA-ATATTC---ACT---CTCTTCAAGTGAACGGTCGTGTTTTTTTTTTTTGCGCTC--CGAATTTTTCA---------TTT--TTAT-----------------------------------------------------CGA-TACAA-ACCAGCGGTGGTTCTG---TTTT-A-------------------AA-TTTGA-ATATTTAAACATTTAAAT-GC-----A----------CTTGA--------TTTCCAA-ACCGT-TCG-CTTCGCGAGTG-------------------------------------------
droRho1 scf7180000777893:9220-9462 + AGA-TATATTTCC------TA--TCGGACGAGT------TGT------------CAGACTTTTTCTGAATGA--------GAGAATTTCT-----------ACAA------------------TC-ACTTTT---CCTTT-CTTTCAAAGTGAACGGTCGTGTTTTT-T--TCTGCGCTT--CGAATTTTGTA---------TTTTGTTTT-----------------------------------------------------CGTT--TATTCCCATCGGTGGGTTTT-A-TAAAAACATCATTAAATTTTC-----T-TTCGG-TTA-----------------------TTTAAACATAAAT------------TTAAAC-TCCGT-TCG-CTTCGCGAGTGCACTTTGT--------A----TTGATAC-TA--------ATAA
droTak1 scf7180000414265:3876-4041 - T--------------------------------------------------------------------------------------------------------------------------------------------CTTTC--AGTGATCGGTCGTGTTTTTGT--CTTGCGCTC--CGAATTTTTGT------------TCTTTT-----------------------------------------------------TGTCCATAA-ACCA-TCGGGGTTTA----ATTC---------------------------AA-ATATTCTAACATTCAAATAGC-----TTT----------TTATGTCACTAA-CAACA-TCCGT-TCG-CTTCGCGAGTGCA-TAGTGATTG-TTTT--------------GTGTTT---AAA
droEug1 scf7180000405766:3081-3200 - GAC-AT------------------------------------------------------------------------------------------------TCA---AA--------------------GC---ATTCT-CTTCCGAAGCGAACGGACGTGTTTTTTT--TCTACTCTC--GTTAACTTTGT------------TGGCTA-----------------------------------------------------TTTAC-GA--------------------------------------------------------------------------------------AT-----------------------A-TACGC-TTA-AACCG-------A-TACGAATTT-CTTT--------------GTATAAATAAAA
dm3 chr3LHet:194514-194696 + AATATT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTCTAT-AGCTTTCAAAGCGAACGGTCGTGTTTTT----TTTGCGCCC--CGATTTTTTAT----------TTTCTGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGGTTTT--A-AATAATATTCTTTA-----------ATTATCAT-ATA-----------------C-----TTTAAACATAATTA----------TTAAAGA-TTCGT-TCA-CTTCGCGAGTG-------------------------------------------
droSim2 node_62121:929-1107 - ATA-AT-------------A--------------------------------------------------------------------AT------------------------------------ATATTCGTCTAT-AGCTTTCAAAGCGAACGGTCGTGTTTTT-T--TTTGCTCCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGGATTTT-A-AAAAATTTTCTTTA-----------ATTATCAT-ATA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-TT--------------
droSec2 scaffold_137:70498-70733 + ACA-AAAAATAACGTAGTAAG------CTTAAAGACGCGAGT-----------------------TAAATGAAAAGTTAAATGAAAAACGA-----------------------------------AAAATCGTCTAT-GGCTTTCAAAGCGAACGGTCGTGTTTTT----TTTGCTCCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGGTTTTT-A-AATAATTTTCTTTA-----------ATTATCAT-ATA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-TT--G-------AGCA
droYak3 chr2h:170524-170707 - TAT-TA-------------A------------------------------------------------------------------------AAATAATAATTTA---TA----------------ATATTC---TTCAA-GCTTCAAAGCGAACGCGCGTGTTTTT-T--TCTGCGCTC--CGAATTTAT------------TTTAGTTT-----------------------------------------------------TGCC--AAA-TCCAGCTGTGGATTTG---AATA-AATTCTTGA-----------AT-AGCAC--T--------------------------AGAACAGCACTAG---------TTAACGT-TCCGT-TCG-CTTCGCGAGTGAATTTTTT--------T----GTGAT-TT--------------
droEre2 scaffold_4845:1181843-1181920 - TCA-AT-------------A--------------------------------------------------------------------AATAAAAT----------CAAAATATA-------------TATCGTCTTC-TAACTTCAAAGCGAACGGTCGTGTTTTT-T--TCTGCGCAT--TGAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_singleton_1360:980-1148 + AT-------------------------------------------------------------------------------------------------------------------------------TCC---GTTCT-CTTTCGTAGCGATCAGACGTGTTTTTGT--TTTGCGCTC--CGCATTTTTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTTTCCTAACTA-AATTC-------------------------TA-----------------------ACCCGACAACAAT------------CTGGAAACCAAT-TGTATTACGCGAGTGCA-TGCCTTTTG-ATT------------T--GTGTTAA-AATA
droPer2 scaffold_79:88139-88380 - ATA-TT----AGCGGCGTCTG--CCGGAGGAG-------AGC------------CATACTGACTTAGTAT---------CGGGTATATA------------TCAT------------------TA-ACATTC---GTTCT-CTTTCGTAGTGATCAGACGTGTTTTTGT--TTTGCGCTC--CGCATTTTTCC----------TTTTGTTT-----------------------------------------------------CGAA--TAA-ACAG-CCGGAGTTTTCCTAATTA-AATTCTAAA-----------TATACTTT-CTA-----------------------ACCAGACAACAAT------------CTGGAAACCTAT-TCATTTACGCGAGTGCA-TGCCTTTTG-ATT------------T--GTGTTAA-AATA
droWil2 scf2_1100000004750:23598-23756 - A----------------------------------------------------------------------------------------------------------------------------------------------------GAGGACGGACGTGTTTTT-T--TTTGCGCTTATCAAATTTTTTT---------TTTTTCTCTCGATTAAATACTTTTCTATAACTTTTTACCTCATTATCGGTTTAATAATAATTT--C----A-GCAT-CCGAA-TTT-------------------------------------------------------------------------------------------------TATTT-TCA-TTTTGCGAATTCT-TGCAGTCGC-TTTT--------------GTGTTT------
droVir3 scaffold_12723:316450-316570 + GAA-TC-------------T--------------------------------------------------------------------TTTGCA-------TCCA------------------TC-ACTTTT-C-GTTCTCCTCTTGAAGCGAACAGACATGTTTTTAT--TGTGCTCTC--CGTTTTGT-------------TTTTGATT-----------------------------------------------------TAA---TAA-CACG-CCGGCGCTTTAG---------------------TCTCTATA-TAT-------------------------------------------------------------------------------------------------------------------------AAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ACA-GATATTACCGGAATCGG------CCCAGAGGCCGGAATCATCAATATCAG----------------------TGATAAGAATATTTG-----------------------------------ACATTCCTCTCT-TTATCTTAAAGCGGACGGACGTGTTTTTTT--TGTGCGCAC--TACGTTTTTGTAAAATTTGCAATAAGCTT-----------------------------------------------------TCTA--TAA-ACAA-TCGGTGTTTATT---------------------TCTTTACT-GATAT-AAA----A----ACAAATTGC---------------AATT----------TTTTAGA-TCCGTATCG-CTTCGCGTGTGCAG---TGATATATT-TGGAGGTAA-AA-TA--------ATTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGTATCG-CTTCGCGTGTGCAG---T....................................24200.255500000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGTATCG-CTTCGCGTGTGCAG---TGA..................................26200.204400000
............................................................................................................................................................................................................................................................................................................................................................................................TAGA-TCCGTATCG-CTTCGCGTGTGCA.........................................26200.204400000
...........................................................................................................................................................................................................................................................................................................................TTACT-GATAT-AAA----A----ACAAATTGC---------------AATT----------........................................................................27200.204040000
........................................................................................................................................................................................................................................................................................................................................................TTGC---------------AATT----------TTTTAGA-TCCGTATCG-CT....................................................26200.153030000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAG---TGATATATT-TGGAGGTAA-AA-TA--------ATT.28200.153030000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCG-CTTCGCGTGTGCAG---TGATATATT-...........................26200.102200000
............................................................................................................................................................................................................TAAGCTT-----------------------------------------------------TCTA--TAA-ACAA-TCGGTGTTT.................................................................................................................................................................27200.102020000
..............................................................................................................................................TCTTAAAGCGGACGGACGTGTTTTTT.........................................................................................................................................................................................................................................................................................26200.102020000
...............................................................................................................................................................................................................GCTT-----------------------------------------------------TCTA--TAA-ACAA-TCGGTGTTTA................................................................................................................................................................25200.102000002
..............................................................................................................................................................................................................................................................................................................................................................................T----------TTTTAGA-TCCGTATCG-CTTCGCGTG.............................................26200.102020000
........................................................................................................................................................................................................................................................................................................................................................TTGC---------------AATT----------TTTTAGA-TCCGTATCG-C.....................................................25200.102020000
.............................................................................................................................................................................................................................................................................................................................................................................TT----------TTTTAGA-TCCGTATCG-CTTCGCGT..............................................26200.102010010
.....................................................................................................................................................................TTTT--TGTGCGCAC--TACGTTTTTGTA...............................................................................................................................................................................................................................................................25200.102200000
.......................................................................................................................................TCT-TTATCTTAAAGCGGACGGA...................................................................................................................................................................................................................................................................................................22200.051100000
.......................................................................................................................................................................TT--TGTGCGCAC--TACGTTTTTGTAAAA............................................................................................................................................................................................................................................................26200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AG---TGATATATT-TGGAGGTAA-AA-TA--------A...25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGTGTGCAG---TGATATATT-TGGA.......................26200.051010000
.....................................................................................................................................................................................................................................................................................A-TCGGTGTTTATT---------------------TCTTTACT-................................................................................................................................21200.051010000
...........................................................................................................................................TTATCTTAAAGCGGACGGACGT................................................................................................................................................................................................................................................................................................22200.051000010
...........................................................................................................................................................................................................................................................................................................................................................................................TTAGA-TCCGTATCG-CTTCGCGT..............................................22200.051001000
....................................................................................................................................................................TTTTT--TGTGCGCAC--TACGTTTTTGT................................................................................................................................................................................................................................................................25200.051010000
.......................................................................................................................................TCT-TTATCTTAAAGCGGACGGACGT................................................................................................................................................................................................................................................................................................25200.051010000
................................................................................................................................................................................................................CTT-----------------------------------------------------TCTA--TAA-ACAA-TCGGTGT...................................................................................................................................................................21200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................T----------TTTTAGA-TCCGTATCG-CTTCGCG...............................................24200.051010000
...........................................................................................................................................................................................................................................................................................................................................................C---------------AATT----------TTTTAGA-TCCGTATCG-CC....................................................23200.051010000
.............................................................................................................................................................................................TTGTAAAATTTGCAATAAGCTT-----------------------------------------------------TCTA--TA.................................................................................................................................................................................28200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---TGATATATT-TGGAGGTAA-.................22200.051100000
..............................................................................................................................................TCTTAAAGCGGACGGACGTG...............................................................................................................................................................................................................................................................................................20200.051100000
.................................................................................................................................................TAAAGCGGACGGACGTGTTTTTTT--TGTG..................................................................................................................................................................................................................................................................................28200.051100000
..........................................................................................................................................................................................................................................................................................................................TTTACT-GATAT-AAA----A----ACAAATTGC---------------AATT----------........................................................................28200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................AGA-TCCGTATCG-CTTCGCGTGTGC..........................................24200.051100000
...............................................................................................................................................................................................................GCTT-----------------------------------------------------TCTA--TAA-ACAA-TCGGTGTTT.................................................................................................................................................................24200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCAG---TGATATATT-TGG........................23200.051100000
...............................................................................................................................................................................................................................................................................AA-ACAA-TCGGTGTTTATT---------------------TCTTTACT-GA..............................................................................................................................28200.051010000
droBip1
AGG-CC-------------T------------------GAAGTAGTCAGATCAG----------------------TA----------AGAAACAT----------GAAGAGTC------------AGATTCTTTCTCTT-CCTCTTAAGCGAACGGTCGTGTTTTTTA--TGTGCGCAC--TGCGTTTATTA---------TAA--ATAT-----------------------------------------------------TGC-CGTAA----G-CCGGTGTTTACT---------------------AATTTAAG-AATAGAACTTTGAGA------AATTTCAGTTTA-----------------------TCCTAAA-TC-GTATCG-CTTCGCGTGTGCTG---TGGTATATT-TGGAGGCGA-AT-CA--------AGAASizeHit CountTotal NormTotal
No Reads
droKik1
AGA-TT-------------G--------------------------------------------------------------------AAATCA-------CCGGTGACAATAAGA------------ATTC-AATTCTT-CCTTCAAAGTGAACGGACGTGTTTTTTT--CTTGCGCTC--CCGATTTGTGT------------AGAATT-----------------------------------------------------TGTCTGAAA-ACCT-CCGGGGTTTACT-------------------------------------------AACATTTAA----T-----ATT----------TGGTGTTTCTAA-TAATT-CCCGT-TCA-CCTCGCGTGTGCA-TG---TTAC-TTTT--------------TTATTT---TGTSizeHit CountTotal NormTotal
No Reads
droFic1
GAA-GT-------------GATCCAGGGAGCGC------AAT------------C---------------------------------AAAGATAC----------TGAGAACAA--------TA-ATATTC---ACT---CTCTTCAAGTGAACGGTCGTGTTTTTTTTTTTTGCGCTC--CGAATTTTTCA---------TTT--TTAT-----------------------------------------------------CGA-TACAA-ACCAGCGGTGGTTCTG---TTTT-A-------------------AA-TTTGA-ATATTTAAACATTTAAAT-GC-----A----------CTTGA--------TTTCCAA-ACCGT-TCG-CTTCGCGAGTG-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGA-TATATTTCC------TA--TCGGACGAGT------TGT------------CAGACTTTTTCTGAATGA--------GAGAATTTCT-----------ACAA------------------TC-ACTTTT---CCTTT-CTTTCAAAGTGAACGGTCGTGTTTTT-T--TCTGCGCTT--CGAATTTTGTA---------TTTTGTTTT-----------------------------------------------------CGTT--TATTCCCATCGGTGGGTTTT-A-TAAAAACATCATTAAATTTTC-----T-TTCGG-TTA-----------------------TTTAAACATAAAT------------TTAAAC-TCCGT-TCG-CTTCGCGAGTGCACTTTGT--------A----TTGATAC-TA--------ATAASizeHit CountTotal NormTotal
No Reads
droTak1
T--------------------------------------------------------------------------------------------------------------------------------------------CTTTC--AGTGATCGGTCGTGTTTTTGT--CTTGCGCTC--CGAATTTTTGT------------TCTTTT-----------------------------------------------------TGTCCATAA-ACCA-TCGGGGTTTA----ATTC---------------------------AA-ATATTCTAACATTCAAATAGC-----TTT----------TTATGTCACTAA-CAACA-TCCGT-TCG-CTTCGCGAGTGCA-TAGTGATTG-TTTT--------------GTGTTT---AAASizeHit CountTotal NormTotal
No Reads
droEug1
GAC-AT------------------------------------------------------------------------------------------------TCA---AA--------------------GC---ATTCT-CTTCCGAAGCGAACGGACGTGTTTTTTT--TCTACTCTC--GTTAACTTTGT------------TGGCTA-----------------------------------------------------TTTAC-GA--------------------------------------------------------------------------------------AT-----------------------A-TACGC-TTA-AACCG-------A-TACGAATTT-CTTT--------------GTATAAATAAAASizeHit CountTotal NormTotal
No Reads
dm3
AATATT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTCTAT-AGCTTTCAAAGCGAACGGTCGTGTTTTT----TTTGCGCCC--CGATTTTTTAT----------TTTCTGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGGTTTT--A-AATAATATTCTTTA-----------ATTATCAT-ATA-----------------C-----TTTAAACATAATTA----------TTAAAGA-TTCGT-TCA-CTTCGCGAGTG-------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TTCGT-TCA-CTTCGCGAG.............................................27119.00190000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020003930000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TTCGT-TCA-CTTCGCGAG.............................................26114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100000000000000000000000000000000000000000000200000000001000000000000010101200000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TTCGT-TCA-CTTCGCGA..............................................26112.00120000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001161000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TTCGT-TCA-CTTCGCGAGT............................................2419.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000003000000000000000000000000020001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TA-----------ATTATCAT-ATA-----------------C-----TTTAAACATAATTA----------........................................................................2818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TTCGT-TCA-CTTCGCG...............................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000132000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TCCATTCAAGATTCGTCTAT-AGCTT.................................................................................................................................................................................................................................................................................................................2526.50130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000010000000040000000000200000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTG...............................................................................................................................................................................................................................................................................................2646.50260000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100111100020000000000000000000000000000000000000100000030000000000000000100110200200000000000000000000000000000000000000000000000000000000000000000001100000000200000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AAAGA-TTCGT-TCA-CTTCGCGA..............................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200010000000000000001010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TTCGT-TCA-CTTCGCGAGT............................................2816.0060000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TCCATTCAAGATTCGTCTAT-AGCTTT................................................................................................................................................................................................................................................................................................................2626.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000002000000000100000000000201120000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................T----------TTTCTGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGG....................................................................................................................................................................2625.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGGTTT.................................................................................................................................................................2435.00150000000000000000000000000000000000000000001000000020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000310000110000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................TTCAAGATTCGTCTAT-AGCTTTCAAA............................................................................................................................................................................................................................................................................................................2624.5090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000020102010000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..................................................................................................................ACATTCCATTCAAGATTCGTC..........................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000200000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TTCGT-TCA-CTTCGCGAG.............................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TTCGT-TCA-CTTCGCGAGT............................................2714.0040000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AAAGA-TTCGT-TCA-CTTCGCGAG.............................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TATCAT-ATA-----------------C-----TTTAAACATAATTA----------T.......................................................................2513.0030000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TTCGT-TCA-CTTCGCGAGT............................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGA................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................A----ACATTCCATTCAAGATTCGT...........................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000110000000000000000000000000000000000
...........................................................................................................................TCAAGATTCGTCTAT-AGCTTTCAAAGC..........................................................................................................................................................................................................................................................................................................2723.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTC..........................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCA.......................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CATTCAAGATTCGTCTAT-AGC...................................................................................................................................................................................................................................................................................................................2123.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TTCGT-TCA-CTTCGCGAGTG-------------------------------------------2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................TCCATTCAAGATTCGTCTAT-AGCTTTC...............................................................................................................................................................................................................................................................................................................2722.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCAAGATTCGTCTAT-AGCTTTCAAA............................................................................................................................................................................................................................................................................................................2522.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCTGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGGTTT.................................................................................................................................................................2622.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................TGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGGTTTT--..............................................................................................................................................................2532.3370000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100010000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGT..............................................................................................................................................................................................................................................................................................2742.2590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000003210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TTCGT-TCA-CTTCGCG...............................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAA..................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TTCGT-TCA-CTTCGC................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................TCTAT-AGCTTTCAAAGCGAACGGTCGTG...............................................................................................................................................................................................................................................................................................2832.0060000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................TGTTTTT----TTTGCGCCC--CGATTTTTTA.................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATT.....................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ACATTCCATTCAAGATTCGTCTAT-AGC...................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCG............................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....T-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGAT...............................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TATCAT-ATA-----------------C-----TTTAAACATAATTA----------........................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTC..........................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TTCGT-TCA-CTTCGCGA..............................................2212.0020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TATTCTTTA-----------ATTATCAT-ATA-----------------C-----TTTA............................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TTCGT-TCA-CTTCGCGAG.............................................2312.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTCAAGATTCGTCTAT-AGCT..................................................................................................................................................................................................................................................................................................................2122.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGTT.............................................................................................................................................................................................................................................................................................2841.7570000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110200110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CAAGATTCGTCTAT-AGCTTTCAAA............................................................................................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTCCATTCAAGATTCGTCTAT-AGCTT.................................................................................................................................................................................................................................................................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTCAAGATTCGTCTAT-AGCTT.................................................................................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000
............................................................................................................................CAAGATTCGTCTAT-AGCTTTCAAAGC..........................................................................................................................................................................................................................................................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTCCATTCAAGATTCGTCTAT-......................................................................................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCAAGATTCGTCTAT-AGC...................................................................................................................................................................................................................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TGTT-----------------------------------------------------TGTC--AAA--CCAGCCATGGTT..................................................................................................................................................................2331.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTC..........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................A-TTCGT-TCA-CTTCGCGAGT............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TTCGT-TCA-CTTCGC................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....TT-AGTGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATT.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTC..........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TTCGT-TCA-CTTCGC................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCC------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATT..............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AAAGA-TTCGT-TCA-CTTCGCG...............................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TTCGT-TCA-CTTCGC................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TAAACATAATTA----------TTAAAGA-TTCGT-TCA-C.....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTTAT----------TTTCTGTT-----------------------------------------------------TGTC--AAA--CCAGC.........................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CATTCAAGATTCGTCTAT-AG....................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CCATTCAAGATTCGTCTAT-AGC...................................................................................................................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............C------T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTCTAT-A.....................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTAAACATAATTA----------TTAAAGA-TTCGT-..........................................................2531.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACATAATTA----------TTAAAGA-TTCGT-TCA-C.....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCAAGATTCGTCTAT-AGCTTTCAG.............................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
...................................................................................................................CATTCCATTCAAGATTCGTCT.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................T----------------------------------------------------------------------------------------AA----ACATTCCATTCAAGATTCGTCTA........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CATAATTA----------TTAAAGA-TTCGT-TCA-CA....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CATTCAAGATTCGTCTAT-AGCT..................................................................................................................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTA----------TTAAAGA-TTCGT-TCA-CT....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................TCCATTCAAGATTCGTCTAT-AGCT..................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
ATA-AT-------------A--------------------------------------------------------------------AT------------------------------------ATATTCGTCTAT-AGCTTTCAAAGCGAACGGTCGTGTTTTT-T--TTTGCTCCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGGATTTT-A-AAAAATTTTCTTTA-----------ATTATCAT-ATA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-TT--------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................271639.066250002000407419911110000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-T.........................................................242028.705740001000321122372010000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGTT.............................................................................................................................................................................................................................................................................................28209.0518100000006692000230000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-TCT.....................................24158.201230002104020807000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-........................................21157.201080000106010001000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TCG-CT....................................................28147.141000013000680270001000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGT............................................18175.53940000540001435000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-TCTTT--------...........................26135.4671000350040815000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTG...............................................................................................................................................................................................................................................................................................26204.509000000043022060181000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-................................................................18204.2084000082002000000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGG....................................................................................................................................................................2214.00400004000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................26103.703700000010112113000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-T.......................................22153.6755000052000003000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-TC......................................23153.6054000052000002000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGT..............................................................................................................................................................................................................................................................................................27203.607200000039019140000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG-CTTCGCGAGTGAT-TCTTT--------T----GTGA..................25163.19510000002169231000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGGA...................................................................................................................................................................2312.00200000001001000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGGAT..................................................................................................................................................................2412.00200010000001000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGGATTT................................................................................................................................................................2612.00200010000001000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCT.......................................................................................................................................................................1912.00200002000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TCG-CTT...................................................29142.00280000000180100000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TC........................................................25172.00340010000141180000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................27101.701700000022580000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTC..................................................18201.6032000003200000000000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTGCTCCC--C..........................................................................................................................................................................................................................................................................27101.5015000001500000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGT............................................27101.401400000026240000000
...................................................................................................................................................................................................................................................................................................................................................................TAAACATAATTA----------TTAAAGA-TCC.............................................................22191.2624000024000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TCG-......................................................26161.2520000000011081000000
.................................................................................................................................................................................................................................................................................................................................................................TTTAAACATAATTA----------TTAAAGA-TCCGT-T.........................................................27121.171400400011080000000
...................................................................................................................................................................................................................................................................................................................................................................TAAACATAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................28161.131800000013050081000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAGT............................................24111.091200000012531000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTCGGATT.................................................................................................................................................................2511.00100000001000000000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCTC......................................................................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................................................................................................................T-A-AAAAATTTTCTTTA-----------ATTATCAT-ATA-----------------------................................................................................................27150.931400000041450000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-TCTT....................................25130.851100010000406000000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTGCTCCC--...........................................................................................................................................................................................................................................................................26100.80800200001005000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGT............................................28100.80800000025100000000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTGCTCC..............................................................................................................................................................................................................................................................................25100.80800100000205000000
.................................................................................................................................................................................................................................................................................................T-A-AAAAATTTTCTTTA-----------ATTATCAT-A.........................................................................................................................25170.761300000062140000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-..........................................................23200.651300000005052010000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGA..............................................16170.651100000010307000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAG.............................................23110.64700000001311010000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAGTGAT-........................................27110.55600000000006000000
.....................................................................................................................................................................................................................................................................................................................................................................AACATAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................26170.53900000004021020000
.........................................................................................................................................................................................................................................................................................................................................................................................................G-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-T...............26180.50900000001071000000
.........................................................................................................................................................................................................................................................................................................................................A-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-..........................................................27100.50500000000000050000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................3090.44400000010030000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGT............................................3190.44400000004000000000
..................................................................................................................................................................................................................................................................................................................................................................TTAAACATAATTA----------TTAAAGA-TCCGT-T.........................................................26120.42500000010120001000
...........................................................................................................................................................................................................................................................................................................................................................................ATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................28100.40400000002002000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-................25180.39700000001150000000
.................................................................................................................................................................................................................................................................................................................................................................TTTAAACATAATTA----------TTAAAGA-................................................................21160.38600000020310000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTCGC................................................27140.36500000002010011000
......................................................................................................................................................................................................................................................................................................................................................................ACATAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................25170.35600000021111000000
...........................................................................................................................................AGCTTTCAAAGCGAACGGTCGTGTT.............................................................................................................................................................................................................................................................................................25200.35700000001330000000
..................................................................................................................................................................................................................................................................................................................................TCAT-ATA-----------------------TTTAAACATAATTA----------TTAAAGA-................................................................28120.33400000001300000000
..................................................................................................................................................................................................................................................................................................................................................................TTAAACATAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................2990.33300000003000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................2990.33300000001020000000
...................................................................................................................................................................................................................................................................................................................................................................TAAACATAATTA----------TTAAAGA-TCCGT-T.........................................................25190.32600000003110001000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTGCTC...............................................................................................................................................................................................................................................................................24100.30300200010000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTT...................................................24180.28500210000110000000
.....................................................................................................................................................................................................................................................................................................................................................................................................T-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-T...............29160.25400000020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGAGTGAT-TCTTT--------T----GTGAT-T...............24200.25500000000032000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGAGTGAT-TCTTT--------T----GTGAT-T...............23200.25500000001013000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-T...............28160.25400000020200000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TCG-A.....................................................27160.25400000002020000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGA..........................................20160.25400000000202000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTC..................................................25180.22400000020020000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................2990.22200000001001000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................2890.22200000010010000000
...................................................................................................................................................................................................................................................................................................................................................................TAAACATAATTA----------TTAAAGA-TCCGT-TCG-CT....................................................29140.21300000002010000000
..............................................................................................................................................................................................................................................................................................................................................................................A----------TTAAAGA-TCCGT-TCG-CTTC..................................................20200.20400010000002001000
.............................................................................................................................................................................TGCTCCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------.........................................................................................................................................................................................25200.20400000010210000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................25100.20200000010100000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGT................................................................................................................................................................................................................................................................................................25200.20400100030000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................T-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-................28160.19300000010110000000
...............................................................................................................................................................................................................................................................................................................................................................................................A-TCCGT-TCG-CTTCGCGAG.............................................18160.19300000010002000000
.....................................................................................................................................................................................................................................................................................................................................................................................................T-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGA..................27160.19300000010110000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAGTGA..........................................26110.18200000010001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGCGAGT............................................25110.18200000010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................24110.18200000000011000000
...............................................................................................................................................................................................................................................................................................TTT-A-AAAAATTTTCTTTA-----------ATTATCAT-A.........................................................................................................................27170.18300000000300000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTG...........................................19170.18300000000003000000
.................................................................................................................................................................................................................................................................................................................................................................TTTAAACATAATTA----------TTAAAGA-TCCGT-..........................................................26120.17200000000100001000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAGTGAA-........................................27120.17200000000020000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGTA.............................................................................................................................................................................................................................................................................................28200.15300000000100020000
..............................................................................................................................................................................................................................................................................................................................................................................A----------TTAAAGA-TCCGT-TCG-C.....................................................17200.15300000000003000000
..............................................................................................................................................TTTCAAAGCGAACGGTCGTGTTT............................................................................................................................................................................................................................................................................................23200.15300000000300000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGAGTGAT-TCTTT--------T----GTGAT-TT--------------25200.15300000000012000000
..................................................................................................................................TCGTCTAT-AGCTTTCAAAGCGAACGGT...................................................................................................................................................................................................................................................................................................27140.14200000000002000000
....................................................................................................................................................................................................................................................................................................................................................................................................GT-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGA..................28160.13200000010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-T...............27160.13200000001010000000
....................................................................................................................................................................................................................................................................................................................................................................AAACATAATTA----------TTAAAGA-TCCGT-TCG-T.....................................................27160.13200010000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAG.............................................17170.12200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCG-CTTCGCGAGTGAT-TCTTT--------T----GTG...................25170.12200000010010000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGT............................................3090.11100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTAAACATAATTA----------TTAAAGA-TCCGT-TCG-......................................................2990.11100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G-CTTCGCGAGTGAT-TCTTT--------T----GTGA..................24180.11200000000020000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G-CTTCGCGAGTGAT-TCTTT--------T----GTG...................23190.11200000000020000000
.....................................................................................................................................................................................................................................................................................................................................T-ATA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-..........................................................30100.10100000010000000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGA..............................................................................................................................................................................................................................................................................................27200.10200000001000010000
..........................................................................................................................................................CGGTCGTGTTTTT-T--TTTGCTCCC--CGG........................................................................................................................................................................................................................................................................26100.10100000000000001000
....................................................................................................................................................AGCGAACGGTCGTGTTTTT-T--TTTGCT................................................................................................................................................................................................................................................................................26100.10100000000001000000
........................................................................................................................................AT-AGCTTTCAAAGCGAACGGTCGTGTT.............................................................................................................................................................................................................................................................................................27200.10200000010010000000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTGCT................................................................................................................................................................................................................................................................................23100.10100000000001000000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTGCTCCC--CG.........................................................................................................................................................................................................................................................................28100.10100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................26100.10100000001000000000
..................................................................................................................................................AAAGCGAACGGTCGTGTTTTT-T--TTTGCT................................................................................................................................................................................................................................................................................28100.10100000000100000000
.........................................................................................................................................T-AGCTTTCAAAGCGAACGGTCGTGT..............................................................................................................................................................................................................................................................................................25200.10200000000110000000
........................................................................................................................................................................................................................................................................................................................................TA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-T.........................................................29100.10100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................A----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................25100.10100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G-CTTCGCGAGTGAT-TCT.....................................17200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................27100.10100000000100000000
.....................................................................................................................................................GCGAACGGTCGTGTTTTT-T--TTTGCTCCC--...........................................................................................................................................................................................................................................................................28100.10100000000010000000
........................................................................................................................................................................................................................................................................................................................................TA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-..........................................................28100.10100000010000000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGT...................................................................................................................................................................................................................................................................................................22200.10200000000002000000
..............................................................................................................................................TTTCAAAGCGAACGGTCGTGTT.............................................................................................................................................................................................................................................................................................22200.10200000000200000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGAGTGAT-TCTTT--------T----GTG...................21200.10200000001001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGCGAGTG...........................................26110.09100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAGTG...........................................25110.09100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................AAAGA-TCCGT-TCG-CTTCGCGAG.............................................22110.09100000000001000000
........................................................................................................................................................AACGGTCGTGTTTTT-T--TTTGCTCCG--...........................................................................................................................................................................................................................................................................25110.09100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGCGAGTGA..........................................27110.09100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGA............................................27110.09100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................AGA-TCCGT-TCG-CTTCGCGAGTGAT-........................................24110.09100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGCGAGTGAT-........................................28110.09100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCG...............................................28120.08100000001000000000
........................................................................................................................................................................................................................................................................................................................................TA-----------------------TTTAAACATAATTA----------TTAAAGA-................................................................23120.08100000000100000000
..................................................................................................................................................................TTTTT-T--TTTGCTCCC--CGGTTTTTA-----------CT.....................................................................................................................................................................................................................................................26120.08100000000010000000
.......................................................................................................................................................GAACGGTCGTGTTTTT-T--TTTG..................................................................................................................................................................................................................................................................................21120.08100000000000010000
..................................................................................................................................................AAAGCGAACGGTCGTGTTTTT-T--TTTGAAA...............................................................................................................................................................................................................................................................................29140.07100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................AACATAATTA----------TTAAAGA-TCCGT-TCG-CT....................................................27150.07100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................A-TCCGT-TCG-CTTCGCGAGTGA..........................................21150.07100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA-TCCGT-TCG-CTTCGCGAGTGA..........................................22150.07100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA-TCCGT-TCG-CTTCGCGAGTGAT-TC......................................25150.07100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................ACATAATTA----------TTAAAGA-TCCGT-TCG-CT....................................................26150.07100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA-TCCGT-TCG-CTTCGCGAGTGAT-........................................23150.07100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................A-TCCGT-TCG-CTTCGCGAGTGAT-........................................22150.07100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA-TCCGT-TCG-CTTCGCGAGT............................................20160.06100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGT-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGA..................29160.06100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................A-TCCGT-TCG-CTTCGCGAGT............................................19160.06100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-TT--------------28160.06100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-A...............27160.06100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-................27160.06100000000001000000
...................................................................................................................................................................................................................................................................................................A-AAAAATTTTCTTTA-----------ATTATCAT-ATA-----------------------................................................................................................26160.06100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................TAAACATAATTA----------TTAAAGA-TCCGT-TCG-T.....................................................28160.06100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................GA-TCCGT-TCG-CTTCGCGAG.............................................19160.06100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CTTCG.................................................26160.06100000000010000000
.................................................................................................................................................................................................................................................................................................T-A-AAAAATTTTCTTTA-----------ATTATCAT-AA........................................................................................................................26170.06100000000010000000
.....................................................................................................................................................................................................................................................................................................AAAAATTTTCTTTA-----------ATTATCAT-ATA-----------------------................................................................................................25170.06100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGC................................................24170.06100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................A----------TTAAAGA-TCCGT-TCG-CTTCGC................................................22170.06100000000000001000
................................................................................................................................................................................................................................................................................................TT-A-AAAAATTTTCTTTA-----------ATTATCAT-A.........................................................................................................................26170.06100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................T-TCG-CTTCGCGAGTGAT-TCTTT--------T----GT....................25170.06100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CCGT-TCG-CTTCGCGAGT............................................17180.06100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGC................................................21180.06100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................ATAATTA----------TTAAAGA-TCCGT-TCG-CTT...................................................25180.06100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CT....................................................23180.06100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTA----------TTAAAGA-TCCGT-TCG-CTTCG.................................................24190.05100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTGAT-TCTTT--------T----GTGAT-................21200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGAGTGAT-TCTTT--------T----GTTT..................22200.05100000000010000000
.................................................................................................................................................................................CCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--..............................................................................................................................................................................28200.05100000010000000000
...................................................................................................................................................................................C--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--C.............................................................................................................................................................................27200.05100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G-CTTCGCGAGTGAT-TC......................................16200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-C.....................................................18200.05100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTGAT-TCTTT--------T----GTGAT-G...............21200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-CTT...................................................20200.05100000001000000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTA...............................................................................................................................................................................................................................................................................................26200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTGAT-TCTTT--------T----GTGAT-T...............21200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-CA....................................................23200.05100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGAGTGAT-TCTTT--------T----GTGAT-TT--------------24200.05100000000010000000
.............................................................................................................................................................................................TA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--CCAGCC........................................................................................................................................................................24200.05100000000000010000
................................................................................................................................................................................TCCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--A..................................................................................................................................................................................27200.05100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGAGTGAT-TCTTT--------T----GTGAT-................23200.05100000000001000000
........................................................................................................................................................................T--TTTGCTCCC--CGGTTTTTA-----------CT.....................................................................................................................................................................................................................................................21200.05100000000001000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGTTA............................................................................................................................................................................................................................................................................................29200.05100000000000010000
.................................................................................................................................................................................CCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--A..................................................................................................................................................................................26200.05100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCG...............................................15200.05100000000001000000
.....................................................................................................................................TCTAT-AGCTTTCAAAGCGAACGGTCGTGT..............................................................................................................................................................................................................................................................................................29200.05100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................ATAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................23200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TC........................................................16200.05100000000001000000
....................................................................................................................................................................TTT-T--TTTGCTCCC--CGGTTTTTA-----------CTTT...................................................................................................................................................................................................................................................26200.05100000001000000000
..................................................................................................................................................................................CC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--A..................................................................................................................................................................................25200.05100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGT-TCG-CTTCGCGAGTGAT-........................................19200.05100000000001000000
........................................................................................................................................AT-AGCTTTCAAAGCGAACGGTCGT................................................................................................................................................................................................................................................................................................24200.05100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGAGTGAT-TCTTT--------T----GT....................20200.05100000000010000000
.................................................................................................................................................................................CCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AA.................................................................................................................................................................................27200.05100000000100000000
.......................................................................................................................................TAT-AGCTTTCAAAGCGAACGGTCGTGTTT............................................................................................................................................................................................................................................................................................29200.05100000001000000000
.........................................................................................................................................T-AGCTTTCAAAGCGAACG.....................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGAGTGAT-TCTTT--------...........................16200.05100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................ACATAATTA----------TTAAAGA-................................................................16200.05100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG-CTTCGCGAGTGAT-TCTTT--------...........................20200.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................GT-TCG-CTTCGCGAGTGAT-TC......................................20200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG-CTTCGCGAGTGAT-TCT.....................................18200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................AACATAATTA----------TTAAAGA-TCCGT-T.........................................................23200.05100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................GT-TCG-CTTCGCGAGTGAT-TCTTT--------...........................23200.05100000000001000000
...............................................................................................................................................................................................................TGTT-----------------------------------------------------TGTC--AAA--CCAG..........................................................................................................................................................................15200.05100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATTA----------TTAAAGA-TCCGT-TCG-C.....................................................22200.05100000000001000000
..............................................................................................................................................TTTCAAAGCGAACGGTCGTGTTTTT-T--......................................................................................................................................................................................................................................................................................26200.05100000010000000000
droSec2
ACA-AAAAATAACGTAGTAAG------CTTAAAGACGCGAGT-----------------------TAAATGAAAAGTTAAATGAAAAACGA-----------------------------------AAAATCGTCTAT-GGCTTTCAAAGCGAACGGTCGTGTTTTT----TTTGCTCCC--CGGTTTTTA-----------CTTTGTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGGTTTTT-A-AATAATTTTCTTTA-----------ATTATCAT-ATA-----------------------TTTAAACATAATTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGTGAT-TCTTT--------T----GTGAT-TT--G-------AGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGC................................................24201.603200320
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGGTT..................................................................................................................................................................24201.553130010
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAG.............................................27201.402828000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................26200.65138050
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCGAGT............................................28200.601220100
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGG....................................................................................................................................................................22200.60128031
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCGCG...............................................25200.4088000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGGT...................................................................................................................................................................23200.3060060
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTC..................................................22200.2041030
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGGTTTTT-..............................................................................................................................................................27200.1532010
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTT...................................................21200.1022000
..........................................................................................................................................................................................................................................................................................................................................................................................TAAAGA-TCCGT-TCG-CTTCGCGAGT............................................24200.0510010
................................................................................................................................................................................................................GTT-----------------------------------------------------TGTC--AAA--CCAGCCGTGGT...................................................................................................................................................................21200.0511000
...........................................................................................................................................................................................................................................................................................................................................................................................AAAGA-TCCGT-TCG-CTTCGCGAGT............................................23200.0510010
.................................................................................................................................................................................................................................................................................................................................................................................................TCCGT-TCG-CTTCGCGAGTGAT-TCT.....................................24200.0511000
............................................................................................................................................................................................................................................................................................................................................................................TTA----------TTAAAGA-TCCGT-TCG-CTTCG.................................................23200.0510100
.............................................................................................................................................................................................................................................................................................................................................................................TA----------TTAAAGA-TCCGT-TCG-CTTCGCGA..............................................25200.0511000
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCG.......................................................................................................................................................................19200.0510010
..............................................................................................................................................................................................................................................................................................................................................................................A----------TTAAAGA-TCCGT-TCG-CTTCGCG...............................................23200.0510010
.........................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-TCCGT-TCG-CTTCGC................................................21200.0510100
..............................................................................................................................................................................................................GTGTT-----------------------------------------------------TGTC--AAA--CCAGCCGT......................................................................................................................................................................20200.0511000
...............................................................................................................................................................................................................................................................................................................................................................................................A-TCCGT-TCG-CTTCGCGAG.............................................18200.0510010
droYak3
TAT-TA-------------A------------------------------------------------------------------------AAATAATAATTTA---TA----------------ATATTC---TTCAA-GCTTCAAAGCGAACGCGCGTGTTTTT-T--TCTGCGCTC--CGAATTTAT------------TTTAGTTT-----------------------------------------------------TGCC--AAA-TCCAGCTGTGGATTTG---AATA-AATTCTTGA-----------AT-AGCAC--T--------------------------AGAACAGCACTAG---------TTAACGT-TCCGT-TCG-CTTCGCGAGTGAATTTTTT--------T----GTGAT-TT--------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TCA-AT-------------A--------------------------------------------------------------------AATAAAAT----------CAAAATATA-------------TATCGTCTTC-TAACTTCAAAGCGAACGGTCGTGTTTTT-T--TCTGCGCAT--TGAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
AT-------------------------------------------------------------------------------------------------------------------------------TCC---GTTCT-CTTTCGTAGCGATCAGACGTGTTTTTGT--TTTGCGCTC--CGCATTTTTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTTTCCTAACTA-AATTC-------------------------TA-----------------------ACCCGACAACAAT------------CTGGAAACCAAT-TGTATTACGCGAGTGCA-TGCCTTTTG-ATT------------T--GTGTTAA-AATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCT..............................................................................................................................................................................................................................................................................23205.2010409800600000
......................................................................................................................................................CGATCAGACGTGTTTTTGT--TTTGCGC...............................................................................................................................................................................................................................................................................2613.0030000000120
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTGCA-TGCCTTTTG-ATT------------T--............23201.603203200000000
............................................................................................................................................................................................................TTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTG....................................................................................................................................................................24201.402802620000000
.......................................................................................................................................................GATCAGACGTGTTTTTGT--TTTGCGC...............................................................................................................................................................................................................................................................................25201.202402400000000
........................................................................................................................................................................................................................................................................................................................................TA-----------------------ACCCGACAACAAT------------CTGGAAACCAAT-..........................................................2711.0010100000000
................................................................................................................................................................................................................................................................................................TCCTAACTA-AATTC-------------------------TA-----------------------ACCCGAC.........................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAACT.........................................................................................................................................................24201.002001810100000
............................................................................................................................................................................................................................................................................................................TTC-------------------------TA-----------------------ACCCGACAACAAT------------CTGGAAAC...............................................................2611.0010100000000
......................................................................................................................................................CGATCAGACGTGTTTTTGT--TTTGCGCT..............................................................................................................................................................................................................................................................................2711.0010100000000
......................................................................................................................................................CGATCAGACGTGTTTTTGT--TTTG..................................................................................................................................................................................................................................................................................2311.0010100000000
......................................................................................................................................................CGATCAGACGTGTTTTTGT--TTTGCG................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................GATCAGACGTGTTTTTGT--TTTGCGCTC--...........................................................................................................................................................................................................................................................................27200.901801800000000
.......................................................................................................................................................GATCAGACGTGTTTTTGT--TTTG..................................................................................................................................................................................................................................................................................22200.901801800000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAAC..........................................................................................................................................................23200.851701600001000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTGCA-TGCCTTTTG-ATT------------T--GTG.........26200.801601600000000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCG................................................................................................................................................................................................................................................................................21200.751501300200000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTGCA-TGCCTTTTG-ATT------------T--GT..........25200.701401400000000
............................................................................................................................................................GACGTGTTTTTGT--TTTGCGCTC--CG.........................................................................................................................................................................................................................................................................24200.50100800000200
............................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGTGCA-TGCCTTTTG-ATT------------T--G...........26200.50100810000100
.......................................................................................................................................................GATCAGACGTGTTTTTGT--TTTGCGCT..............................................................................................................................................................................................................................................................................26200.501001000000000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--...........................................................................................................................................................................................................................................................................24200.4590090000000
.........................................................................................................................................................TCAGACGTGTTTTTGT--TTTGCGCT..............................................................................................................................................................................................................................................................................24200.4590900000000
............................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGTGCA-TGCCTTTTG-AT............................23200.4590610200000
.........................................................................................................................................................TCAGACGTGTTTTTGT--TTTGCGC...............................................................................................................................................................................................................................................................................23200.4590800001000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCTAAC..........................................................................................................................................................26200.4590710000010
............................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGTGCA-TGCCTTTTG-A.............................22200.4080800000000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGC...............................................................................................................................................................................................................................................................................22200.3570000700000
.............................................................................................................................................................................................TTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGG......................................................................................................................................................................28200.3060500000100
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAA...........................................................................................................................................................22200.3060600000000
............................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGTGCA-TGCCTTTTG-ATT------------...............24200.3060040000200
............................................................................................................................................................................................................TTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTT.................................................................................................................................................................27200.3060600000000
...............................................................................................................................................................................................TC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGG......................................................................................................................................................................26200.3060600000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTACGCGAGTGCA-TGCCTTTTG-ATT------------...............27170.2950500000000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--C..........................................................................................................................................................................................................................................................................25200.2550050000000
............................................................................................................................................................................................................TTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGT...................................................................................................................................................................25200.2550400001000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--CGCAT......................................................................................................................................................................................................................................................................29200.2550500000000
.............................................................................................................................................................................................................TTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTG....................................................................................................................................................................23200.2550500000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTGCA-TGCCTTTTG-ATT------------T--G...........24200.2550000001400
.................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGCA-TGCCTTTTG-ATT------------T--GTGT........24200.2040300001000
............................................................................................................................................................GACGTGTTTTTGT--TTTGCGCTC--CGC........................................................................................................................................................................................................................................................................25200.2040400000000
...........................................................................................................................................................................................................................................................................A--TAA-ACAG-CCGGTGTTTTCCTAAC..........................................................................................................................................................24200.2040400000000
...............................................................................................................................................................GTGTTTTTGT--TTTGCGCT..............................................................................................................................................................................................................................................................................18200.2040400000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTGCA-TGCCTTTTG-ATT------------T--GTG.........25200.2040400000000
...........................................................................................................................................................AGACGTGTTTTTGT--TTTGCGC...............................................................................................................................................................................................................................................................................21200.1530300000000
.........................................................................................................................................................TCAGACGTGTTTTTGT--TTTGCGCTC--...........................................................................................................................................................................................................................................................................25200.1530300000000
.................................................................................................................................TCC---GTTCT-CTTTCGTAG...........................................................................................................................................................................................................................................................................................................17200.1530000000300
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--CGC........................................................................................................................................................................................................................................................................27200.1530030000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAACTA-.......................................................................................................................................................25200.1530300000000
................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGCA-TGCCTTTTG-ATT------------T--GT..........23200.1530300000000
............................................................................................................................................................GACGTGTTTTTGT--TTTGCGCTC--...........................................................................................................................................................................................................................................................................22200.1530300000000
........................................................................................................................................................................................................................................................................TGAA--TAA-ACAG-CCGGTGTTTTCCTA............................................................................................................................................................25200.1530100000200
...........................................................................................................................................................................................TTTTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-A..............................................................................................................................................................................23200.1530000000030
..............................................................................................................................................................................................TTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGG......................................................................................................................................................................27200.1530300000000
.............................................................................................................................................................................................................TTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGT...................................................................................................................................................................24200.1530300000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAGTGCA-TGCCTTTTG-ATT------------...............25200.1530300000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTGCA-TGCCTTTTG-..............................19200.1020200000000
........................................................................................................................................................................................................................................................................TGAA--TAA-ACAG-CCGGTGTTTTCC..............................................................................................................................................................23200.1020200000000
........................................................................................................................................................................................................................................................................TGAA--TAA-ACAG-CCGGTGTTTTCCTAAC..........................................................................................................................................................27200.1020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGTGCA-TGCCTTTTG-ATT------------T--............25200.1020200000000
...............................................................................................................................................................................................................................................................................AA-ACAG-CCGGTGTTTTCCTAAC..........................................................................................................................................................22200.1020200000000
............................................................................................................................................................................................................TTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTT..................................................................................................................................................................26200.1020100001000
................................................................................................................................................................................................C---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-C.........................................................................................................................................................................22200.1020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTGCA-TGCCTTTTG-ATT------------T--............22200.1020200000000
........................................................................................................................................................................................................................................................................TGAA--TAA-ACAG-CCGGTGTTTTCCTAA...........................................................................................................................................................26200.1020200000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCTAACTA-.......................................................................................................................................................28200.1020200000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCTA............................................................................................................................................................24200.1020200000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCT.............................................................................................................................................................23200.1020200000000
..............................................................................................................................................................................................................TGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTT.................................................................................................................................................................25200.1020200000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAACTA-AA.....................................................................................................................................................27200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAGTGCA-TGCCTT..................................19200.1020200000000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--CGCA.......................................................................................................................................................................................................................................................................28200.1020200000000
................................................................................................................................................................................................................TTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTG....................................................................................................................................................................20200.1020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTACGCGAGTGCA-TGCCTTTTG-AT............................26170.0610100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTACGCGAGTGCA-TGCCTT..................................21190.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTACGCGAGTGCA-TGCC....................................19190.0510100000000
...........................................................................................................................................................................................................TTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTG....................................................................................................................................................................25200.0510100000000
...............................................................................................................................................................GTGTTTTTGT--TTTGCGCTC--C..........................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTG-ATT------------T--GTGTTAA-AAT.23200.0510100000000
........................................................................................................................................................ATCAGACGTGTTTTTGT--TTTGCGT...............................................................................................................................................................................................................................................................................24200.0510100000000
...............................................................................................................................................................................................................GTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTAA................................................................................................................................................................25200.0510100000000
...............................................................................................................................................................................................................................................................................AA-ACAG-CCGGTGTTTTCCTAACT.........................................................................................................................................................23200.0510100000000
............................................................................................................................................................GACGTGTTTTTGT--TTTGCGCTC--CGCATT.....................................................................................................................................................................................................................................................................28200.0510100000000
...........................................................................................................................................................................................................................................................................A--TAA-ACAG-CCGGTGTTTTCC..............................................................................................................................................................20200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGTGCA-TGCCTTTTG-ATA------------A--............25200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAGTGCA-TGCCTTTTG-ATT------------T--G...........27200.0510100000000
........................................................................................................................................................ATCAGACGTGTTTTTGT--TTTGC.................................................................................................................................................................................................................................................................................22200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTTG-ATT------------T--GTGTTAA-AA..20200.0510000000100
............................................................................................................................................................................................TTTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-C.........................................................................................................................................................................26200.0510010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGCA-TGCCTTTTG-ATT------------T--GTGT........21200.0510100000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAACTA-AATT...................................................................................................................................................29200.0510100000000
..................................................................................................................................................................................TC--CGCATTTTTTC---------CTTTTGTTT-----------------------------------------------------TGAA--...................................................................................................................................................................................26200.0510100000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAGG..........................................................................................................................................................23200.0510100000000
.............................................................................................................................................................................................TTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACA............................................................................................................................................................................23200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTG-ATT------------T--GTGTTAA-....20200.0510000100000
.................................................................................................................................................................GTTTTTGT--TTTGCGCTC--CGC........................................................................................................................................................................................................................................................................20200.0510000010000
...............................................................................................................................................................................................................GTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGG......................................................................................................................................................................19200.0510100000000
...........................................................................................................................................................................................TTTTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-C.........................................................................................................................................................................27200.0510100000000
.............................................................................................................................................................................................TTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCG.......................................................................................................................................................................27200.0510100000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCTAACT.........................................................................................................................................................27200.0510100000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCTAACTA-AAT....................................................................................................................................................28200.0510100000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTT................................................................................................................................................................20200.0510100000000
...........................................................................................................................................................................................................................................................................................TGTTTTCCTAACTA-AATTC-------------------------TA-----------------------ACT.............................................................................................24200.0510100000000
...........................................................................................................................................................AGACGTGTTTTTGT--TTTGCGCTC--C..........................................................................................................................................................................................................................................................................24200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................A-TGCCTTTTG-ATT------------T--GTGT........18200.0510000001000
..............................................................................................................................................................CGTGTTTTTGT--TTTGCGCTC--C..........................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................................................................................................GATCAGACGTGTTTTTGT--TTTGCGT...............................................................................................................................................................................................................................................................................25200.0510100000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCTAACA.........................................................................................................................................................27200.0510000000010
............................................................................................................................................................................................................TTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGG......................................................................................................................................................................22200.0510100000000
............................................................................................................................................................GACGTGTTTTTGT--TTTGCGCTC--CGCAT......................................................................................................................................................................................................................................................................27200.0510010000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTC...............................................................................................................................................................21200.0510010000000
.............................................................................................................................................................................TGCGCTC--CGCATTTTTTC---------CTTTT..................................................................................................................................................................................................................................................23200.0510000000100
..................................................................................................................................................................................TC--CGCATTTTTTC---------CTTTTGTTT-----------------------------------------------------TG.......................................................................................................................................................................................24200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTG-ATT------------T--GTGTTAA-AATA24200.0510100000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCCT.............................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................................TTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTT.................................................................................................................................................................26200.0510100000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTT.................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................................................................................................................AA--TAA-ACAG-CCGGTGTTTTCCTAAC..........................................................................................................................................................25200.0510100000000
...............................................................................................................................................................................................TC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGT.....................................................................................................................................................................27200.0510000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTG-ATT------------T--GTGTTAA-AAA.23200.0510100000000
.........................................................................................................................................................................................................................................................................GAA--TAA-ACAG-CCGGTGTTTTCCTAA...........................................................................................................................................................25200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAGTGCA-TGCCTTTTG-A.............................23200.0510000000100
.............................................................................................................................................................................................TTTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-C.........................................................................................................................................................................25200.0510010000000
..........................................................................................................................................................................................................................................................................AA--TAA-ACAG-CCGGTGTTTTCCT.............................................................................................................................................................22200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAGTGCA-TGCCTTT.................................20200.0510100000000
..............................................................................................................................................................................................TTC---------CTTTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCG.......................................................................................................................................................................26200.0510100000000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGTGTTTTCC..............................................................................................................................................................19200.0510010000000
..............................................................................................................................................................................................................TGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGT...................................................................................................................................................................23200.0510100000000
........................................................................................................................................................ATCAGACGTGTTTTTGT--TTTG..................................................................................................................................................................................................................................................................................21200.0510100000000
.................................................................................................................................................................................................................TT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGTTTTCC..............................................................................................................................................................25200.0510100000000
............................................................................................................................................................GACGTGTTTTTGT--TTTGCGC...............................................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................TT-----------------------------------------------------TGAA--TAA-ACAG-CCGGTGT...................................................................................................................................................................20200.0510100000000
............................................................................................................................................................................................................TTTGTTT-----------------------------------------------------TGAA--TAA-ACAG-CCGGT.....................................................................................................................................................................23200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGCA-TGCCTTTTG-ATT------------T--GTGTT.......23200.0510010000000
droPer2
ATA-TT----AGCGGCGTCTG--CCGGAGGAG-------AGC------------CATACTGACTTAGTAT---------CGGGTATATA------------TCAT------------------TA-ACATTC---GTTCT-CTTTCGTAGTGATCAGACGTGTTTTTGT--TTTGCGCTC--CGCATTTTTCC----------TTTTGTTT-----------------------------------------------------CGAA--TAA-ACAG-CCGGAGTTTTCCTAATTA-AATTCTAAA-----------TATACTTT-CTA-----------------------ACCAGACAACAAT------------CTGGAAACCTAT-TCATTTACGCGAGTGCA-TGCCTTTTG-ATT------------T--GTGTTAA-AATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--C..........................................................................................................................................................................................................................................................................25201.15230230000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGAGTTTTCCTAATT.........................................................................................................................................................24200.255050000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGAGTTTTCCTAATTA-.......................................................................................................................................................25200.204040000
...........................................................................................................................................................AGACGTGTTTTTGT--TTTGCGCT..............................................................................................................................................................................................................................................................................22200.204040000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGC.................................................................................................................................................................................................................................................................................20200.051001000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--...........................................................................................................................................................................................................................................................................24200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................T------------CTGGAAACCTAT-TCATTTACGCGA..............................................25200.051010000
.................................................................................................................................................................................................................................................................................................................AA-----------TATACTTT-CTA-----------------------ACCAGAC.........................................................................................20200.051010000
...............................................................................................................................................................................................CC----------TTTTGTTT-----------------------------------------------------CGAA--TAA-ACAG-CCGGA.....................................................................................................................................................................26200.051010000
..............................................................................................................................................................................................................................................................................TAA-ACAG-CCGGAGTTTTCCT.............................................................................................................................................................20200.051001000
..........................................................................................................................................................CAGACGTGTTTTTGT--TTTGCGCTC--CGCA.......................................................................................................................................................................................................................................................................28200.051000001
..................................................................................................................................................................................................................................................................................................................................................................................................CTAT-TCATTTACGCGAGTGCA-TGC.....................................24200.051010000
droWil2
A----------------------------------------------------------------------------------------------------------------------------------------------------GAGGACGGACGTGTTTTT-T--TTTGCGCTTATCAAATTTTTTT---------TTTTTCTCTCGATTAAATACTTTTCTATAACTTTTTACCTCATTATCGGTTTAATAATAATTT--C----A-GCAT-CCGAA-TTT-------------------------------------------------------------------------------------------------TATTT-TCA-TTTTGCGAATTCT-TGCAGTCGC-TTTT--------------GTGTTT------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................ATCGGTTTAATAATAATTT--C----A-GCAT-..........................................................................................................................................................................25120.08101000
.................................................................................................................................................................................................................................................TCATTATCGGTTTAATAATAATT.........................................................................................................................................................................................23120.08101000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATTCT-TGCAGTCGC-TTTT--------------GTG.........21170.06101000
................................................................................................................................................................TGTTTTT-T--TTTGCGCTTATCA.........................................................................................................................................................................................................................................................................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCT-TGCAGTCGC-TTTT--------------G...........21200.05101000
droVir3
GAA-TC-------------T--------------------------------------------------------------------TTTGCA-------TCCA------------------TC-ACTTTT-C-GTTCTCCTCTTGAAGCGAACAGACATGTTTTTAT--TGTGCTCTC--CGTTTTGT-------------TTTTGATT-----------------------------------------------------TAA---TAA-CACG-CCGGCGCTTTAG---------------------TCTCTATA-TAT-------------------------------------------------------------------------------------------------------------------------AAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................T--------------------------------------------------------------------TTTGCA-------TCCA------------------TC-ACTTTT-C-GTTCTCC...................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................T-C-GTTCTCCTCTTGAAGCGAAC......................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000001000000000000000000000000000000

Generated: 05/17/2015 at 10:13 PM