dan_342

CDS [Dana\GF18990-cds]; exon [dana_GLEANR_20451:3]; intron [Dana\GF18990-in]; exon [dana_GLEANR_20451:2]; CDS [Dana\GF18990-cds]

##################################################-----------------------------------------#################--------------------------------- CAAGCCTAAGAAGAAAAAGATTCGCACCCGTGTCATCAAGAAGGTCAAGGGTGATAAACAAGAAGTCACCAAAATCGAAACTGTCGAGGAGGACAACAAAGCTCCTGAGACAACAGTCACTGTCGAAGAATCTGAAGTCGA ************************************************..............................((.......))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M058 embryo	V039 embryo	M044 female body	V106 head	V105 male body	V055 head
...........................................................................CGAAACTGTCGAGGAGGAC...............................................	19	0	20	1.15	23	23	0	0	0	0	0
........AGAAGAAAAAGATTCGCACCCGTGC............................................................................................................	25	1	2	0.50	1	1	0	0	0	0	0
............................................................................GAAACTGTCGAGGAGGAC...............................................	18	0	20	0.35	7	7	0	0	0	0	0
.........................................................................ATCGAAACTGTCGAGGAGGACA..............................................	22	0	3	0.33	1	0	0	1	0	0	0
...........................................GTCAAGGGTGATAAACAAGAAGTCAC........................................................................	26	0	4	0.25	1	0	1	0	0	0	0
....................................................GATAAACAAGAAGTCACCAAAAC..................................................................	23	1	4	0.25	1	1	0	0	0	0	0
...........................................................................CTAAACTGTCGAGGAGGAC...............................................	19	1	20	0.25	5	5	0	0	0	0	0
....................................................GATAAACAAGAAGTCACCAAAATCGA...............................................................	26	0	4	0.25	1	0	1	0	0	0	0
....................................................GATAAACAAGAAGTCACCAAAATC.................................................................	24	0	4	0.25	1	1	0	0	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGT........................	20	0	20	0.20	4	2	2	0	0	0	0
.......................................................................................GAAGGACAACAAAACTCCT...................................	19	2	5	0.20	1	1	0	0	0	0	0
..................................................GTGATAAATAAGAAGTTAGCAA.....................................................................	22	3	6	0.17	1	0	0	1	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTCACT....................	25	0	20	0.15	3	3	0	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTCACTGT..................	27	0	20	0.15	3	3	0	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTCAC.....................	24	0	20	0.15	3	3	0	0	0	0	0
..................................................................................................AAGCTCCTGAGACAACAGTCA......................	21	0	20	0.10	2	1	1	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGT........................	21	0	20	0.10	2	0	2	0	0	0	0
...............................GGCATCAAGAAGGTCAAGGGTG........................................................................................	22	1	20	0.10	2	2	0	0	0	0	0
...........................................................................CGATACTGTCGAGGAGGAC...............................................	19	1	20	0.10	2	2	0	0	0	0	0
........AGAAAAGAAAGATGCGCACC.................................................................................................................	20	3	14	0.07	1	1	0	0	0	0	0
....................................................CAAAAACAAGAAGTCACC.......................................................................	18	2	18	0.06	1	1	0	0	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGTCACT....................	24	0	20	0.05	1	0	1	0	0	0	0
...............................................................................................................AACAGTCACTGTCGAAGAAT..........	20	0	20	0.05	1	0	0	0	0	1	0
...................ATTCGCACCCGTGTCATCAAGA....................................................................................................	22	0	20	0.05	1	1	0	0	0	0	0
......................CGCACCCGTGTCATCAAGAAGGTCAAGG...........................................................................................	28	0	20	0.05	1	0	0	0	0	1	0
...............................TTCATCAAGAAGGTCAAGGGC.........................................................................................	21	2	20	0.05	1	1	0	0	0	0	0
..................................................................................................................AGTCACTGTCGAAGAATCTGAAGA...	24	1	20	0.05	1	1	0	0	0	0	0
...................................................................................................................GTCACTGTCGAAGAATCTGA......	20	0	20	0.05	1	0	0	1	0	0	0
.....................................................ATAAACAAGACGTACCCAA.....................................................................	19	3	20	0.05	1	1	0	0	0	0	0
..........................................................................TCGAAACTGTCGAGGAGGAC...............................................	20	0	20	0.05	1	1	0	0	0	0	0
..........................................................................................................GAGACAACAGTCACTGTC.................	18	0	20	0.05	1	1	0	0	0	0	0
...........................................................................CGAAACAGTCGAGGAGGAC...............................................	19	1	20	0.05	1	0	1	0	0	0	0
............................................................................GAAACCGTCGAGGAAGAC...............................................	18	2	20	0.05	1	0	0	0	0	0	1
................................................................................................................ACAGTCACTGTCGAAGAATCT........	21	0	20	0.05	1	0	0	0	1	0	0
..................GATTCGCACCCGTGTCATCAAGAAGGT................................................................................................	27	0	20	0.05	1	1	0	0	0	0	0
....................................................................................................GCTCCTGAGACAACAGTCACTGTCGAAC.............	28	1	20	0.05	1	1	0	0	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGTCACTTT..................	26	1	20	0.05	1	1	0	0	0	0	0
......................................ATAAGGTCAAGGGTGATAAACA.................................................................................	22	1	20	0.05	1	1	0	0	0	0	0
.......................................................AAACAAGAAGACACCAACA...................................................................	19	2	20	0.05	1	1	0	0	0	0	0
........................................................................AATCGAAACTGTCGAGGAGGAC...............................................	22	0	20	0.05	1	0	1	0	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGC........................	20	1	20	0.05	1	1	0	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTC.......................	22	0	20	0.05	1	1	0	0	0	0	0
........................................AAGGTCAAGGGTGATAAACA.................................................................................	20	0	20	0.05	1	1	0	0	0	0	0
.................................CATCAAGAAGGTCAAGGGC.........................................................................................	19	1	20	0.05	1	1	0	0	0	0	0
..........................CCCGTGTCATCAAGAAGGTC...............................................................................................	20	0	20	0.05	1	1	0	0	0	0	0
...............................GGCTTCAAGAAGGTCAAGGGC.........................................................................................	21	3	20	0.05	1	1	0	0	0	0	0
.............................................................................................CTACAAAGCTCCTGAGACAACAGC........................	24	2	20	0.05	1	1	0	0	0	0	0
..............................................................................................................CGACAGTCACTGTCGAAGAATCT........	23	1	20	0.05	1	1	0	0	0	0	0
...........................................................................................GACTACAAAGCTCCTGAGAC..............................	20	1	20	0.05	1	1	0	0	0	0	0
........................................AAGGTCAAGGGTGATAAAC..................................................................................	19	0	20	0.05	1	0	0	0	1	0	0
...............................................................AGTCACCAAGATCGAAACCGTCGAGGAC..................................................	28	3	20	0.05	1	1	0	0	0	0	0
.......................................GAAGGTCAAGGGTGATAAACA.................................................................................	21	0	20	0.05	1	0	0	0	1	0	0

GTTCGGATTCTTCTTTTTCTAAGCGTGGGCACAGTAGTTCTTCCAGTTCCCACTATTTGTTCTTCAGTGGTTTTAGCTTTGACAGCTCCTCCTGTTGTTTCGAGGACTCTGTTGTCAGTGACAGCTTCTTAGACTTCAGCT ************************************************..............................((.......))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M044 female body
........................................................TTGTTCTTCAGTGTTTCTAGCT...............................................................	22	2	4	0.25	1	1
............................................................TCTTCAGTGATTCTAACTTTGACAGCT......................................................	27	3	4	0.25	1	1
........................................................TCGTTCTTCAGTGGTTCTAGCTTT.............................................................	24	2	20	0.05	1	1
....................................................CTGTTTGTTCTTCAGTGGTTCTAGCT...............................................................	26	2	20	0.05	1	1
.......................................CTTCTAGTTCCCACTGTTTGTTCTT.............................................................................	25	2	20	0.05	1	1
........................................TTCCAGTTCCCACTATTCGTTCTT.............................................................................	24	1	20	0.05	1	1

Species	Coordinate	ID	Alignment
droAna3	scaffold_12571:4626-4766 +	dan_342	CAAGCCTAAGAAGAAAAAGATTCGCACCCGTGTCATCAAGAAGGTCAAGGGTGATAAACAAGAAGTCACCAAAATCGAAACTGTCGAGGAGGACAACAAAGCTCCTGAGACAACAGTCACTGTCGAAGAATCTGAAGTCGA------
droBip1	scf7180000392954:4228-4368 +		CAAGCCCAAGAAGAAGAAGATTCGCACACGTGTCATCAAGAAGGTCAAGGGTGATAAGCAGGAGGTCACCAAAATCGAAACTGTCGAGGAGGATGACAAGGCACCTGAGACAACGGTTACCGTCGAAGAATCTGAAGCTGA------
droKik1	scf7180000302441:1734287-1734427 +		CAAGCCAAAGAAGAAGAAGATTCGCACTCGTGTTATCAAGAAGGTCAAGGGAGACAAGCAAGAAGTCACCAAGATCGAAACTGTCGAGGAAGATGACAAGCAACCTGAAACAACAGTCACTGTGGAAGAAGTTCCGGTGGA------
droFic1	scf7180000453052:986549-986689 +		CAAGCCCAAGAAGAAGAAGATCCGAACCCGCGTTATCAAGAAGGTCAAGGGTGACAAACAAGAAGTCACCAAGATTGAAACCGTCGAGGAGGATGATAAACAACCCGAGACAACTGTCACTGTGGAAGAAATCCCGGTTGA------
droEle1	scf7180000491249:3422284-3422424 +		CAAGCCAAAGAAGAAGAAGATCCGCACTCGCGTAATCAAGAAGGTCAAGGGTGACAAACAAGAAGTTACCAAGATTGAAACCGTCGAGGAGGATGATAAGCAACCAGAAACAACTGTCACTGTCGAAGAACTTCCATTTGA------
droRho1	scf7180000779211:186-326 -		CAAGCCAAAGAAGAAGAAGATCCGCACTCGCGTAATCAAGAAGGTCAAGGGTGACAAGCAAGAAGTTACCAAGATTGAAATTGTCGAGGAGGATGACAAACAACCCGAAACAACTGTCACCGTCGAAGAACTTCCTGTAGA------
droBia1	scf7180000302428:8795710-8795850 -		CAAGCCAAAGAAGAAGAAGATCCGCACTCGGGTTATCAAGAAGGTCAAGGGCGACAAACAAGAAGTCACGAAGATCGAAACCGTCGAGGAAGATGACAAGCAACCCGAAACCACAGTTACCGTTGAAGAACTTCCGTTCGA------
droTak1	scf7180000415229:103-243 +		CAAGCCAAAGAAGAAGAAGATCCGCACTCGTGTGATCAAGAAGGTCAAGGGTGACAAACAAGAAGTCACAAAGATCGAAACCGTCGAGGAGGATGACAAGCAACCAGAAACCACTGTAACTGTTGAAGAACTTCCGTTCGA------
droEug1	scf7180000407756:399590-399730 -		CAAGCCAAAGAAGAAGAAGATCCGCACTCGCGTAATAAAGAAGGTCAAGGGTGACAAACAAGAAGTTACCAAGATTGAAACCGTTGAGGAGGACGACAAGCAACCTGAAACAACGGTCACTGTCGAAGAACTTCCATACGA------
dm3	chr3L:2063887-2064033 -		CAAGCCTAAGAAGAAAAAGATCCGTACTCGTGTTATCAAGAAGGTCAAGGGTGACAAGCAAGAAGTCACCAAAATTGAAACCGTCGAGGAGGACGACAAACAACCCGAAACAACGGTCACCGTTGAGGAAGTTCCGTATGAAGAAGA
droSim2	node_76821:133-273 -		CAAGCCTAAGAAGAAGAAGATCCGCACTCGCGTTATCAAGAAGGTCAAGGGTGACAAGCAGGAAGTCACCAAGATTGAAACTGTCGAGGAAGACGACAAGCAACCCGAGACAACGGTTACTGTTGAAGAACTTCCGTTCGA------
droSec2	scaffold_2:2100116-2100256 -		CAAGCCTAAGAAGAAGAAGATCCGTACTCGCGTTATTAAGAAGGTCAAGGGTGACAAGCAAGAAGTCACCAAGATTGAAACCGTCGAGGAGGACGACAAGCAACCCGAAACAACGGTCACTGTTGAAGAACTTCCGTTCGA------
droYak3	3L:2026384-2026524 -		CAAGCCTAAGAAGAAGAAGATCCGCACTCGTGTTATCAAGAAGGTCAAGGGTGACAAGCAGGAAGTCACCAAGATTGAAACTGTCGAGGAGGACAACAAGCAACCCGAGACAACGGTTACTGTTGAAGAACTTCCGTTCGA------
droEre2	scaffold_2621:553-693 +		CAAGCCTAAGAAGAAGAAGATCCGCACTCGTGTTATCAAGAAGGTCAAGGGTGATAAGCAAGAAGTCACTAAGATTGAAACTGTCGAGGAGGACGACAAACAGCCCGAAACAACAGTCACCGTTGAAGAACTTCCGTTTGA------
dp5	XR_group6:11975535-11975675 -		CAAGCCCAAGAAGAAGAAGATCCGCACTCGGGTAATCAAGAAGGTCAAGGGCGACAAACAAGAAGTCACCAAGATCGAAACCGTCGAGGAGGATGACAAGCCTTCGGAGACAACAGTCACCGTCGAAGAGGCTGCTTACGA------
droPer2	scaffold_4481:1036-1170 -		CAAACCCAAGACGAAGAAGATACGCACTCGCGTAATTAAGAAGGTCAAGGGTGATAAGCAAGAGGTCACCAAGATCGAAACCGTCGAAGAGGATAACAAGAAGCCAGAGACAACAGTCACGGTGGAAGAAACT------GA------
droWil2	scf2_1100000004729:1333433-1333573 +		CAAGCCTAAAAAGAAGAAGATCCGCACACGGGTCATCAAGAAGGTGAAGGGTGACAAACAAGAAGTCACAAAGATTGAAACTGTCGAAGAGGATGACAAACAACCCGAGACAACTGTAACAGTCGAAGAACTCCCTGTGGA------
droVir3	scaffold_9885:259-399 +		CAAGCCTAAGAAGAAGAAGATACGCACACGTGTTATCAAGAAGGTTAAGGGTGACAAACAAGAAGTCACCAAGATTGAAACCATCGAAGAGGATGACAAACAACCAGAGACAACTGTCACAGTGGAAGAGATTCCTGTGGA------
droMoj3	scaffold_1287:373-513 +		CAAGCCCAAAAAGAAGAAGATACGCACACGTGTTATCAAGAAGGTTAAGGGTGATAAACAAGAAGTCACCAAGATTGAAACCGTCGAAGAAGATGACAAACAACCCGAAACTACTGTCACAGTTGAAGAAGTTCCAGTGGA------
droGri2	scaffold_5435:3339-3479 +		CAAGCCAAAGAAGAAGAAGATACGCACTCGTGTTATCAAGAAGGTTAAGGGTGATAAACAAGAAGTTACCAAGATCGAAACCGTCGAGGAGGATGACAAAGAACCAGAGACAACTGTCACTGTGGAAGAGGTTCCTGTGGA------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droAna3

CAAGCCTAAGAAGAAAAAGATTCGCACCCGTGTCATCAAGAAGGTCAAGGGTGATAAACAAGAAGTCACCAAAATCGAAACTGTCGAGGAGGACAACAAAGCTCCTGAGACAACAGTCACTGTCGAAGAATCTGAAGTCGA------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...........................................................................CGAAACTGTCGAGGAGGAC.....................................................	19	20	1.15	23	0	23	0	0	0	0
........AGAAGAAAAAGATTCGCACCCGTGC..................................................................................................................	25	2	0.50	1	0	1	0	0	0	0
............................................................................GAAACTGTCGAGGAGGAC.....................................................	18	20	0.35	7	0	7	0	0	0	0
.........................................................................ATCGAAACTGTCGAGGAGGACA....................................................	22	3	0.33	1	1	0	0	0	0	0
...........................................GTCAAGGGTGATAAACAAGAAGTCAC..............................................................................	26	4	0.25	1	0	0	1	0	0	0
....................................................GATAAACAAGAAGTCACCAAAAC........................................................................	23	4	0.25	1	0	1	0	0	0	0
....................................................GATAAACAAGAAGTCACCAAAATCGA.....................................................................	26	4	0.25	1	0	0	1	0	0	0
....................................................GATAAACAAGAAGTCACCAAAATC.......................................................................	24	4	0.25	1	0	1	0	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGT..............................	20	20	0.20	4	0	2	2	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTCACT..........................	25	20	0.15	3	0	3	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTCACTGT........................	27	20	0.15	3	0	3	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTCAC...........................	24	20	0.15	3	0	3	0	0	0	0
..................................................................................................AAGCTCCTGAGACAACAGTCA............................	21	20	0.10	2	0	1	1	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGT..............................	21	20	0.10	2	0	0	2	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGTCACT..........................	24	20	0.05	1	0	0	1	0	0	0
...............................................................................................................AACAGTCACTGTCGAAGAAT................	20	20	0.05	1	0	0	0	0	1	0
...................ATTCGCACCCGTGTCATCAAGA..........................................................................................................	22	20	0.05	1	0	1	0	0	0	0
......................CGCACCCGTGTCATCAAGAAGGTCAAGG.................................................................................................	28	20	0.05	1	0	0	0	0	1	0
..................................................................................................................AGTCACTGTCGAAGAATCTGAAGA.........	24	20	0.05	1	0	1	0	0	0	0
...................................................................................................................GTCACTGTCGAAGAATCTGA............	20	20	0.05	1	1	0	0	0	0	0
..........................................................................TCGAAACTGTCGAGGAGGAC.....................................................	20	20	0.05	1	0	1	0	0	0	0
..........................................................................................................GAGACAACAGTCACTGTC.......................	18	20	0.05	1	0	1	0	0	0	0
................................................................................................................ACAGTCACTGTCGAAGAATCT..............	21	20	0.05	1	0	0	0	0	0	1
..................GATTCGCACCCGTGTCATCAAGAAGGT......................................................................................................	27	20	0.05	1	0	1	0	0	0	0
....................................................................................................GCTCCTGAGACAACAGTCACTGTCGAAC...................	28	20	0.05	1	0	1	0	0	0	0
........................................................................AATCGAAACTGTCGAGGAGGAC.....................................................	22	20	0.05	1	0	0	1	0	0	0
.................................................................................................AAAGCTCCTGAGACAACAGC..............................	20	20	0.05	1	0	1	0	0	0	0
................................................................................................CAAAGCTCCTGAGACAACAGTC.............................	22	20	0.05	1	0	1	0	0	0	0
........................................AAGGTCAAGGGTGATAAACA.......................................................................................	20	20	0.05	1	0	1	0	0	0	0
.................................CATCAAGAAGGTCAAGGGC...............................................................................................	19	20	0.05	1	0	1	0	0	0	0
..........................CCCGTGTCATCAAGAAGGTC.....................................................................................................	20	20	0.05	1	0	1	0	0	0	0
........................................AAGGTCAAGGGTGATAAAC........................................................................................	19	20	0.05	1	0	0	0	0	0	1
.......................................GAAGGTCAAGGGTGATAAACA.......................................................................................	21	20	0.05	1	0	0	0	0	0	1

droBip1

CAAGCCCAAGAAGAAGAAGATTCGCACACGTGTCATCAAGAAGGTCAAGGGTGATAAGCAGGAGGTCACCAAAATCGAAACTGTCGAGGAGGATGACAAGGCACCTGAGACAACGGTTACCGTCGAAGAATCTGAAGCTGA------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAAGCCAAAGAAGAAGAAGATTCGCACTCGTGTTATCAAGAAGGTCAAGGGAGACAAGCAAGAAGTCACCAAGATCGAAACTGTCGAGGAAGATGACAAGCAACCTGAAACAACAGTCACTGTGGAAGAAGTTCCGGTGGA------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CAAGCCCAAGAAGAAGAAGATCCGAACCCGCGTTATCAAGAAGGTCAAGGGTGACAAACAAGAAGTCACCAAGATTGAAACCGTCGAGGAGGATGATAAACAACCCGAGACAACTGTCACTGTGGAAGAAATCCCGGTTGA------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CAAGCCAAAGAAGAAGAAGATCCGCACTCGCGTAATCAAGAAGGTCAAGGGTGACAAACAAGAAGTTACCAAGATTGAAACCGTCGAGGAGGATGATAAGCAACCAGAAACAACTGTCACTGTCGAAGAACTTCCATTTGA------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAAGCCAAAGAAGAAGAAGATCCGCACTCGCGTAATCAAGAAGGTCAAGGGTGACAAGCAAGAAGTTACCAAGATTGAAATTGTCGAGGAGGATGACAAACAACCCGAAACAACTGTCACCGTCGAAGAACTTCCTGTAGA------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CAAGCCAAAGAAGAAGAAGATCCGCACTCGGGTTATCAAGAAGGTCAAGGGCGACAAACAAGAAGTCACGAAGATCGAAACCGTCGAGGAAGATGACAAGCAACCCGAAACCACAGTTACCGTTGAAGAACTTCCGTTCGA------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CAAGCCAAAGAAGAAGAAGATCCGCACTCGTGTGATCAAGAAGGTCAAGGGTGACAAACAAGAAGTCACAAAGATCGAAACCGTCGAGGAGGATGACAAGCAACCAGAAACCACTGTAACTGTTGAAGAACTTCCGTTCGA------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CAAGCCAAAGAAGAAGAAGATCCGCACTCGCGTAATAAAGAAGGTCAAGGGTGACAAACAAGAAGTTACCAAGATTGAAACCGTTGAGGAGGACGACAAGCAACCTGAAACAACGGTCACTGTCGAAGAACTTCCATACGA------	Size	Hit Count	Total Norm	Total
No Reads

dm3

CAAGCCTAAGAAGAAAAAGATCCGTACTCGTGTTATCAAGAAGGTCAAGGGTGACAAGCAAGAAGTCACCAAAATTGAAACCGTCGAGGAGGACGACAAACAACCCGAAACAACGGTCACCGTTGAGGAAGTTCCGTATGAAGAAGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................AAGAAGGTCAAGGGTGACAAGC........................................................................................	22	20	7.25	145	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0
...................................................................................................ACAACCCGAAACAACGGTCACCGT........................	24	20	3.10	62	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0	2	0	1	0	4	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	2	0	0	0	0	0	0	0
..................................................................................................AACAACCCGAAACAACGGTCACCGT........................	25	20	2.20	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	6	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	9	1	0	0	0	0	0	0	0
............................CGTGTTATCAAGAAGGTCAAGGGT...............................................................................................	24	20	1.80	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TTATCAAGAAGGTCAAGGGTG..............................................................................................	21	20	1.60	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	2	0	0	0	1	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	13	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACAAGCA.......................................................................................	23	20	1.55	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	7	0	2	0	0	0	0	0	0
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droSim2

CAAGCCTAAGAAGAAGAAGATCCGCACTCGCGTTATCAAGAAGGTCAAGGGTGACAAGCAGGAAGTCACCAAGATTGAAACTGTCGAGGAAGACGACAAGCAACCCGAGACAACGGTTACTGTTGAAGAACTTCCGTTCGA------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................GAGGAAGACGACAAG...............................................	15	4	4.25	17	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0
.....................................................................................GAGGAAGACGACAAGC..............................................	16	2	3.50	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.................................................................................................................CGGTTACTGTTGAAGAAC................	18	5	2.40	12	1	1	1	0	9	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................TACTGTTGAAGAACTTCCGT..........	20	6	2.17	13	0	1	2	0	10	0	0	0	0	0	0	0	0	0	0	0	0
........AGAAGAAGAAGATCCGCACTCGCGTTA................................................................................................................	27	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0
...............................................................................................................AACGGTTACTGTTGAAGAAC................	20	5	1.20	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................ACGGTTACTGTTGAAGAAC................	19	5	1.20	6	1	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AGGTCAAGGGTGACAAGCAGGAAGTC................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................CAACGGTTACTGTTGAAGAAC................	21	5	0.80	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................TACTGTTGAAGAACTTCCGTT.........	21	6	0.67	4	0	2	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................AACGGTTACTGTTGAAGAACTTCCGT..........	26	5	0.60	3	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................TACTGTTGAAGAACTTCC............	18	6	0.50	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................AACGGTTACTGTTGAAGAACTTCC............	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................AACGGTTACTGTTGAAGAACTTCCGC..........	26	5	0.40	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................ACGGTTACTGTTGAAGAACTTCCG...........	24	5	0.40	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................AACGGTTACTGTTGAAGAA.................	19	5	0.40	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AGAAGAAGAAGATCCGCACTCGC....................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........AGAAGAAGAAGATCCGCACTCGTTA..................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
......................................AGAAGGTCAAGGGTGACA...........................................................................................	18	11	0.27	3	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................ACGGTTACTGTTGAAGAACTTCCGT..........	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................CGGTTACTGTTGAAGAACTTCC............	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................CAACGGTTACTGTTGAAGAACTTCCGT..........	27	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................ACGGTTACTGTTGAAGAACTTCCGTT.........	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................AACGGTTACTGTTGAAGAACTTCCGG..........	26	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TTACTGTTGAAGAACTTCCGTT.........	22	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................ACGGTTACTGTTGAAGAACT...............	20	5	0.20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGAC............................................................................................	18	11	0.18	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AAGCCTAAGAAGAAGAAG................................................................................................................................	18	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................AAGGTCAAGGGTGACAAGCA.......................................................................................	20	11	0.09	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AGGTCAAGGGTGACAAGC........................................................................................	18	12	0.08	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGT...............................................................................................	15	14	0.07	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

CAAGCCTAAGAAGAAGAAGATCCGTACTCGCGTTATTAAGAAGGTCAAGGGTGACAAGCAAGAAGTCACCAAGATTGAAACCGTCGAGGAGGACGACAAGCAACCCGAAACAACGGTCACTGTTGAAGAACTTCCGTTCGA------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..................................ATTAAGAAGGTCAAGGGT...............................................................................................	18	10	0.90	9	0	0	9	0
.................................TATTAAGAAGGTCAAGGGT...............................................................................................	19	10	0.60	6	0	0	6	0
.........................................................................ATTGAAACCGTCGAGGAGGA......................................................	20	10	0.40	4	0	0	4	0
.............................................................................................................ACAACGGTCACTGTTGAAGAACTTCCG...........	27	3	0.33	1	1	0	0	0
...................................................................................................................GTCACTGTTGAAGAACTTCC............	20	3	0.33	1	0	0	1	0
........................................................................GATTGAAACCGTCGAGGAGGACGACAAGC..............................................	29	8	0.25	2	0	2	0	0
....................................................................................CGAGGAGGACGACAAGCAACCCGAAAC....................................	27	5	0.20	1	0	0	1	0
............................................................................................ACGACAAGCAACCCGAAACAACGG...............................	24	5	0.20	1	1	0	0	0
............................CGCGTTATTAAGAAGGTC.....................................................................................................	18	11	0.18	2	0	0	2	0
........................................AAGGTCAAGGGTGACAAGCAAGAAGT.................................................................................	26	11	0.18	2	1	0	1	0
.......................................GAAGGTCAAGGGTGACAAGC........................................................................................	20	11	0.18	2	0	1	1	0
..................................................................CACCAAGATTGAAACCGTCGAGGAGG.......................................................	26	6	0.17	1	0	0	1	0
.....................................................................CAAGATTGAAACCGTCGAGGAGGAC.....................................................	25	6	0.17	1	0	0	1	0
....................................................GACAAGCAAGAAGTCACCAAG..........................................................................	21	6	0.17	1	0	0	1	0
....CCTAAGAAGAAGAAGATCCGTACT.......................................................................................................................	24	6	0.17	1	0	0	1	0
......................................................CAAGCAAGAAGTCACCAAG..........................................................................	19	6	0.17	1	0	0	1	0
........AGAAGAAGAAGATCCGTACTCGCC...................................................................................................................	24	6	0.17	1	1	0	0	0
...........................................GTCAAGGGTGACAAGCAAGAAGTCACCA............................................................................	28	6	0.17	1	1	0	0	0
....................................................GACAAGCAAGAAGTCACCAAGATTGA.....................................................................	26	6	0.17	1	0	0	1	0
....................................................GACAAGCAAGAAGTCACCA............................................................................	19	6	0.17	1	0	0	1	0
..................................................................CACCAAGATTGAAACCGTCGAGGAGGA......................................................	27	6	0.17	1	0	0	1	0
............................................................AGAAGTCACCAAGATTGAAACCGTC..............................................................	25	6	0.17	1	1	0	0	0
....................................................................CCAAGATTGAAACCGTCGAGGAG........................................................	23	6	0.17	1	0	0	1	0
...........................................................AAGAAGTCACCAAGATTGAA....................................................................	20	7	0.14	1	0	0	1	0
...GCCTAAGAAGAAGAAGATCCGT..........................................................................................................................	22	7	0.14	1	0	0	1	0
...GCCTAAGAAGAAGAAGATCCG...........................................................................................................................	21	7	0.14	1	0	1	0	0
.....CTAAGAAGAAGAAGATCCGT..........................................................................................................................	20	7	0.14	1	0	0	1	0
....CCTAAGAAGAAGAAGATC.............................................................................................................................	18	8	0.13	1	0	0	1	0
...........AGAAGAAGATCCGTACTCGCGT..................................................................................................................	22	8	0.13	1	0	1	0	0
...........................................................................TGAAACCGTCGAGGAGGACGACAAGC..............................................	26	8	0.13	1	0	1	0	0
............................................................................GAAACCGTCGAGGAGGACGACAAGC..............................................	25	8	0.13	1	0	0	1	0
..........................................................................TTGAAACCGTCGAGGAGGACGACAAGC..............................................	27	8	0.13	1	1	0	0	0
...............................................................................ACCGTCGAGGAGGACGACAAGC..............................................	22	8	0.13	1	0	1	0	0
.....................................................................................GAGGAGGACGACAAGCAAC...........................................	19	9	0.11	1	1	0	0	0
....................................................................................CGAGGAGGACGACAAGCAACC..........................................	21	9	0.11	1	1	0	0	0
....................................................................................CGAGGAGGACGACAAGCA.............................................	18	9	0.11	1	0	0	1	0
...............GAAGATCCGTACTCGCGTT.................................................................................................................	19	9	0.11	1	0	0	1	0
.............AAGAAGATCCGTACTCGCGTT.................................................................................................................	21	9	0.11	1	0	0	0	1
...................ATCCGTACTCGCGTTATTAAGAAG........................................................................................................	24	9	0.11	1	1	0	0	0
....................TCCGTACTCGCGTTATTAAGAAGG.......................................................................................................	24	9	0.11	1	1	0	0	0
................AAGATCCGTACTCGCGTTATT..............................................................................................................	21	9	0.11	1	1	0	0	0
..............AGAAGATCCGTACTCGCGTT.................................................................................................................	20	9	0.11	1	0	0	1	0
.......................GTACTCGCGTTATTAAGA..........................................................................................................	18	9	0.11	1	0	0	1	0
............................CGCGTTATTAAGAAGGTCAAGGGT...............................................................................................	24	10	0.10	1	1	0	0	0
..................................ATTAAGAAGGTCAAGGGTG..............................................................................................	19	10	0.10	1	0	0	1	0
...................................TTAAGAAGGTCAAGGGTGACAAGCA.......................................................................................	25	10	0.10	1	0	0	1	0
.......................................................................AGATTGAAACCGTCGAGGAGGA......................................................	22	10	0.10	1	1	0	0	0
..................................ATTAAGAAGGTCAAGGGTGA.............................................................................................	20	10	0.10	1	0	0	1	0
................................TTATTAAGAAGGTCAAGGGT...............................................................................................	20	10	0.10	1	0	0	1	0
................................TTATTAAGAAGGTCAAGGGTGACAAGC........................................................................................	27	10	0.10	1	0	0	1	0
.........................................................................ATTGAAACCGTCGAGGAGG.......................................................	19	11	0.09	1	0	0	1	0
........................................AAGGTCAAGGGTGACAAGC........................................................................................	19	11	0.09	1	0	0	1	0
.............................................CAAGGGTGACAAGCAAGAA...................................................................................	19	11	0.09	1	0	0	1	0
................................................GGGTGACAAGCAAGAAGT.................................................................................	18	11	0.09	1	0	0	1	0
..............................CGTTATTAAGAAGGTCAAGGG................................................................................................	21	11	0.09	1	0	1	0	0
........................................................................GATTGAAACCGTCGAGGAGG.......................................................	20	11	0.09	1	0	1	0	0
.........................................AGGTCAAGGGTGACAAGCA.......................................................................................	19	11	0.09	1	0	0	0	1

droYak3

CAAGCCTAAGAAGAAGAAGATCCGCACTCGTGTTATCAAGAAGGTCAAGGGTGACAAGCAGGAAGTCACCAAGATTGAAACTGTCGAGGAGGACAACAAGCAACCCGAGACAACGGTTACTGTTGAAGAACTTCCGTTCGA------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......AAGAAGAAGAAGATCCGCACTCGTGTTATC..............................................................................................................	30	2	6.00	12	0	0	0	0	0	0	0	0	0	0	12
................................................................................CTGTCGAGGAGGACAACAAGC..............................................	21	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................GATTGAAACTGTCGAGGAGGA......................................................	21	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
................................................................GTCACCAAGATTGAAACTGTCGAGGAGGA......................................................	29	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................AACAAGCAACCCGAGACAACGGTTACT..........................	27	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
........................CACTCGTGTTATCAAGAAGGTCAAGGGT...............................................................................................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................TCACCAAGATTGAAACTGTCGAGGAG........................................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
.....CTAAGAAGAAGAAGATCCGCACTCGT....................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...GCCTAAGAAGAAGAAGATCCGCACTCGT....................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................CAAGATTGAAACTGTCGAGGAGGA......................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..........AAGAAGAAGATCCGCACTCGTGT..................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..........AAGAAGAAGATCCGCACTCGTGTT.................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................ACTGTCGAGGAGGACAACAAGC..............................................	22	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
............................CGTGTTATCAAGAAGGTCAAGG.................................................................................................	22	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................AACTGTCGAGGAGGACAACAAGCAACCC.........................................	28	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
...............................GTTATCAAGAAGGTCAAGGGT...............................................................................................	21	20	0.40	8	0	0	0	1	0	0	5	0	0	0	2
.....................................AAGAAGGTCAAGGGTGACAAGCAGG.....................................................................................	25	14	0.29	4	0	4	0	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACAAGC........................................................................................	22	20	0.25	5	0	0	0	0	0	0	5	0	0	0	0
.........................................AGGTCAAGGGTGACAAGCAGGAAGTC................................................................................	26	14	0.21	3	0	0	0	0	0	0	0	0	0	0	3
...............................................................................................ACAAGCAACCCGAGACAACG................................	20	5	0.20	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................ACTGTTGAAGAACTTCCGTT.........	20	10	0.20	2	0	0	0	0	0	0	2	0	0	0	0
.............................................CAAGGGTGACAAGCAGGAAGT.................................................................................	21	16	0.19	3	0	0	0	0	0	0	3	0	0	0	0
.....................................................................................................................TACTGTTGAAGAACTTCCGTTCGA------	24	6	0.17	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................CCCGAGACAACGGTTACTGTTGATTT..................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0	0
..................................ATCAAGAAGGTCAAGGGTGAC............................................................................................	21	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
..................................ATCAAGAAGGTCAAGGGTGA.............................................................................................	20	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0
....................................CAAGAAGGTCAAGGGTGA.............................................................................................	18	20	0.15	3	0	1	0	0	0	0	2	0	0	0	0
...................................................................................................................GTTACTGTTGAAGAACTTCCGTT.........	23	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................TACTGTTGAAGAACTTCCGTT.........	21	7	0.14	1	0	0	0	0	0	0	1	0	0	0	0
....................................................GACAAGCAGGAAGTCACCAAGATT.......................................................................	24	14	0.14	2	0	0	1	0	0	0	1	0	0	0	0
.................................................................TCACCAAGATTGAAACTGTCGAGG..........................................................	24	15	0.13	2	0	1	1	0	0	0	0	0	0	0	0
................................................................................................................ACGGTTACTGTTGAAGAAC................	19	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0
.....CTAAGAAGAAGAAGATCCGCACT.......................................................................................................................	23	20	0.10	2	0	1	1	0	0	0	0	0	0	0	0
.....CTAAGAAGAAGAAGATCCGCACTC......................................................................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
CAAGCCTAAGAAGAAGAAGATCC............................................................................................................................	23	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0
...................................TCAAGAAGGTCAAGGGTGACAAGCAG......................................................................................	26	12	0.08	1	0	1	0	0	0	0	0	0	0	0	0
....................................CAAGAAGGTCAAGGGTGACAAGCAG......................................................................................	25	12	0.08	1	0	1	0	0	0	0	0	0	0	0	0
......................................................CAAGCAGGAAGTCACCAAGATTGAAAC..................................................................	27	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0
...................................................TGACAAGCAGGAAGTCACCAAG..........................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0
......................................................CAAGCAGGAAGTCACCAAG..........................................................................	19	14	0.07	1	0	0	0	0	0	0	1	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACAAGCAGGAAGT.................................................................................	29	14	0.07	1	0	0	0	0	0	0	1	0	0	0	0
......................................AGAAGGTCAAGGGTGACAAGCAGG.....................................................................................	24	14	0.07	1	0	0	0	0	0	1	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACAAGCAGGA....................................................................................	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0
......................................AGAAGGTCAAGGGTGACAAGCAGGAA...................................................................................	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0
........................................................AGCAGGAAGTCACCAAGATTG......................................................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0
...........................................GTCAAGGGTGACAAGCAGGA....................................................................................	20	14	0.07	1	0	0	0	0	0	0	1	0	0	0	0
...................................................TGACAAGCAGGAAGTCACCAAGATT.......................................................................	25	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0
...........................................GTCAAGGGTGACAAGCAGGAAGTCA...............................................................................	25	14	0.07	1	0	0	0	1	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACAAGCAG......................................................................................	24	14	0.07	1	0	0	0	0	0	0	1	0	0	0	0
.......................................GAAGGTCAAGGGTGACAAGCAGGAAGT.................................................................................	27	14	0.07	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................TCACCAAGATTGAAACTGTCGAG...........................................................	23	15	0.07	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................CCAAGATTGAAACTGTCGAG...........................................................	20	15	0.07	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................CACCAAGATTGAAACTGTCGAGG..........................................................	23	15	0.07	1	0	0	0	0	0	0	1	0	0	0	0
................................................................GTCACCAAGATTGAAACTGTCGAGG..........................................................	25	15	0.07	1	0	0	1	0	0	0	0	0	0	0	0
..............................................AAGGGTGACAAGCAGGAAGTCAC..............................................................................	23	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0
...............................................AGGGTGACAAGCAGGAAGTC................................................................................	20	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0
................................................GGGTGACAAGCAGGAAGTC................................................................................	19	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0
....................................................GACAAGCAGGAAGTCACCAA...........................................................................	20	17	0.06	1	0	0	0	0	0	0	1	0	0	0	0
....................................CAAGAAGGTCAAGGGTGACAAGC........................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
CAAGCCTAAGAAGAAGAAGATCCGCA.........................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................TTATCAAGAAGGTCAAGGGTGACA...........................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................TATCAAGAAGGTCAAGGGTGACAAGCA.......................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................CACCAAGATTGAAACTGTC..............................................................	19	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
...................................TCAAGAAGGTCAAGGGTGACAAG.........................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
....................................CAAGAAGGTCAAGGGTGAC............................................................................................	19	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
...............................GTTATCAAGAAGGTCAAGGGTGACAAGC........................................................................................	28	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
.........GAAGAAGAAGATCCGCACTC......................................................................................................................	20	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...............................GTTATCAAGAAGGTCAAGGGTGACA...........................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................TATCAAGAAGGTCAAGGGTGA.............................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................ATCAAGAAGGTCAAGGGT...............................................................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
......................................AGAAGGTCAAGGGTGACAAGCA.......................................................................................	22	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
.......................................GAAGGTCAAGGGTGACAAGC........................................................................................	20	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0
..................................................................CACCAAGATTGAAACTGT...............................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
......................................AGAAGGTCAAGGGTGACA...........................................................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
........................................AAGGTCAAGGGTGACAAGC........................................................................................	19	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0
.........GAAGAAGAAGATCCGCAC........................................................................................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...................................TCAAGAAGGTCAAGGGTGACAAGCA.......................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...GCCTAAGAAGAAGAAGATCCGCACT.......................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................................................GTCACCAAGATTGAAACTG................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
CAAGCCTAAGAAGAAGAAGATCCGCAT........................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACAAGCA.......................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...............................GTTATCAAGAAGGTCAAGGGTGAC............................................................................................	24	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
...............................GTTATCAAGAAGGTCAAGGGTGA.............................................................................................	23	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
..AGCCTAAGAAGAAGAAGATCC............................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
................................TTATCAAGAAGGTCAAGGGTGACAA..........................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........AGAAGAAGAAGATCCGCACTA......................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGACA...........................................................................................	19	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0

droEre2

CAAGCCTAAGAAGAAGAAGATCCGCACTCGTGTTATCAAGAAGGTCAAGGGTGATAAGCAAGAAGTCACTAAGATTGAAACTGTCGAGGAGGACGACAAACAGCCCGAAACAACAGTCACCGTTGAAGAACTTCCGTTTGA------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
............................CGTGTTATCAAGAAGGTCAAGGG................................................................................................	23	20	1.75	35	0	0	0	0	0	0	35
............................CGTGTTATCAAGAAGGTCAAGGGT...............................................................................................	24	20	0.65	13	0	0	0	0	2	0	11
....................................................................CTAAGATTGAAACTGTCGAGGAGGACGACA.................................................	30	20	0.50	10	0	0	0	0	0	0	10
....................................................................................CGAGGAGGACGACAAACAGCCCGA.......................................	24	20	0.40	8	0	0	0	0	0	0	8
...........................TCGTGTTATCAAGAAGGTCAAGGGT...............................................................................................	25	20	0.35	7	0	0	0	0	0	0	7
............................CGTGTTATCAAGAAGGTCAAGGT................................................................................................	23	20	0.20	4	0	0	0	0	0	0	4
.............................GTGTTATCAAGAAGGTCAAGGGT...............................................................................................	23	20	0.20	4	1	0	0	1	2	0	0
..................................................................CACTAAGATTGAAACTGTCGAGGAGGAC.....................................................	28	20	0.15	3	0	3	0	0	0	0	0
.............................................................................................CGACAAACAGCCCGAAACAAC.................................	21	20	0.15	3	0	1	0	2	0	0	0
...............................GTTATCAAGAAGGTCAAGGGT...............................................................................................	21	20	0.15	3	1	0	0	1	0	1	0
.................................TATCAAGAAGGTCAAGGGT...............................................................................................	19	20	0.15	3	0	1	0	0	0	2	0
....................................................GATAAGCAAGAAGTCACTAAGATTGAAA...................................................................	28	20	0.15	3	0	0	0	0	3	0	0
................AAGATCCGCACTCGTGTTATCAAGAAGGT......................................................................................................	29	20	0.10	2	0	0	0	0	0	0	2
..................................ATCAAGAAGGTCAAGGGT...............................................................................................	18	20	0.10	2	2	0	0	0	0	0	0
....................................................GATAAGCAAGAAGTCACTAAGA.........................................................................	22	20	0.10	2	0	0	0	2	0	0	0
...............................................................................................................AACAGTCACCGTTGAAGAA.................	19	20	0.10	2	0	0	0	0	0	2	0
..........AAGAAGAAGATCCGCACTCGTG...................................................................................................................	22	20	0.10	2	1	0	0	0	1	0	0
.............................GTGTTATCAAGAAGGTCAAGGGTGA.............................................................................................	25	20	0.10	2	1	0	0	0	1	0	0
....................................................................CTAAGATTGAAACTGTCGAGGAGGACGA...................................................	28	20	0.10	2	0	0	0	0	0	0	2
...........................................................................................GACGACAAACAGCCCGAAACAACA................................	24	17	0.06	1	0	1	0	0	0	0	0
..........................................................................................GGACGACAAACAGCCCGAAACAACAGT..............................	27	17	0.06	1	0	1	0	0	0	0	0
.............................................................................................................ACAACAGTCACCGTTGAAGAACTT..............	24	17	0.06	1	1	0	0	0	0	0	0
.................................................................................................AAACAGCCCGAAACAACAGT..............................	20	19	0.05	1	0	0	0	0	0	1	0
..................GATCCGCACTCGTGTTATC..............................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0
...........................................................AAGAAGTCACTAAGATTGAAA...................................................................	21	20	0.05	1	0	0	0	0	1	0	0
......................................................................AAGATTGAAACTGTCGAGGAGGAC.....................................................	24	20	0.05	1	0	1	0	0	0	0	0
.............................................................GAAGTCACTAAGATTGAAACT.................................................................	21	20	0.05	1	0	0	0	0	0	1	0
......................CGCACTCGTGTTATCAAGAAGGT......................................................................................................	23	20	0.05	1	0	0	0	1	0	0	0
....................................................................CTAAGATTGAAACTGTCGAGGAGGA......................................................	25	20	0.05	1	0	0	0	0	1	0	0
...........................................................................TGAAACTGTCGAGGAGGA......................................................	18	20	0.05	1	0	0	0	0	1	0	0
....................................................GATAAGCAAGAAGTCACTAAGAT........................................................................	23	20	0.05	1	0	0	0	0	1	0	0
....................................CAAGAAGGTCAAGGGTGATAAGCA.......................................................................................	24	20	0.05	1	0	0	0	0	1	0	0
.......AAGAAGAAGAAGATCCGCACTCGTGTT.................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0
.........................................................................ATTGAAACTGTCGAGGAG........................................................	18	20	0.05	1	0	0	0	0	0	1	0
..............................................................................AACTGTCGAGGAGGACGACA.................................................	20	20	0.05	1	0	0	0	1	0	0	0
...........................................GTCAAGGGTGATAAGCAAGAA...................................................................................	21	20	0.05	1	0	0	0	1	0	0	0
.....................................................................TAAGATTGAAACTGTCGAGGAGG.......................................................	23	20	0.05	1	1	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGTGATAAG.........................................................................................	21	20	0.05	1	0	0	0	0	1	0	0
..................................ATCAAGAAGGTCAAGGGTG..............................................................................................	19	20	0.05	1	0	0	0	0	1	0	0
.....................................................................TAAGATTGAAACTGTCGAGGAGGACGAC..................................................	28	20	0.05	1	0	1	0	0	0	0	0
....................................................................CTAAGATTGAAACTGTCGAGGAGGAC.....................................................	26	20	0.05	1	0	0	0	0	1	0	0
...............................................................................ACTGTCGAGGAGGACGACAAACAGC...........................................	25	20	0.05	1	1	0	0	0	0	0	0
.........................ACTCGTGTTATCAAGAAGGTCAAGGG................................................................................................	26	20	0.05	1	0	0	0	0	0	0	1
...........................................................................................GACGACAAACAGCCCGAAA.....................................	19	20	0.05	1	0	1	0	0	0	0	0
.....................CCGCACTCGTGTTATCAAGAAGGT......................................................................................................	24	20	0.05	1	0	0	0	0	0	1	0
...................................................................ACTAAGATTGAAACTGTCGAGGAGGAC.....................................................	27	20	0.05	1	0	1	0	0	0	0	0
.....................................................ATAAGCAAGAAGTCACTAAGATTG......................................................................	24	20	0.05	1	1	0	0	0	0	0	0
............................................................AGAAGTCACTAAGATTGAAACTGTC..............................................................	25	20	0.05	1	0	1	0	0	0	0	0
.........................................AGGTCAAGGGTGATAAGCAAGAAG..................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
................................TTATCAAGAAGGTCAAGGGT...............................................................................................	20	20	0.05	1	0	0	0	1	0	0	0
........................CACTCGTGTTATCAAGAAGGTCA....................................................................................................	23	20	0.05	1	0	0	0	1	0	0	0
..............AGAAGATCCGCACTCGTGTTATCAA............................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0
....................................................GATAAGCAAGAAGTCACTAAGATT.......................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.....................................................ATAAGCAAGAAGTCACTAAGATTGAAA...................................................................	27	20	0.05	1	1	0	0	0	0	0	0
.................AGATCCGCACTCGTGTTATCAA............................................................................................................	22	20	0.05	1	0	0	0	1	0	0	0
...................................................................................................................GTCACCGTTGAAGAACTTCCGTTTGA------	26	20	0.05	1	0	0	0	0	0	1	0
.......AAGAAGAAGAAGATCCGCACTC......................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
..................................................GTGATAAGCAAGAAGTCA...............................................................................	18	20	0.05	1	0	0	0	0	0	1	0
.................................TATCAAGAAGGTCAAGGGTGATATT.........................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
.........................................................................ATTGAAACTGTCGAGGAGGAC.....................................................	21	20	0.05	1	0	0	0	0	1	0	0
............................................................................GAAACTGTCGAGGAGGACGAC..................................................	21	20	0.05	1	0	1	0	0	0	0	0
........................................................................GATTGAAACTGTCGAGGAG........................................................	19	20	0.05	1	0	0	0	0	0	1	0
.................................TATCAAGAAGGTCAAGGGTG..............................................................................................	20	20	0.05	1	0	0	0	0	0	1	0
..AGCCTAAGAAGAAGAAGATCCGCACTC......................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
..................................................................................................................AGTCACCGTTGAAGAACTTC.............	20	20	0.05	1	1	0	0	0	0	0	0
.............................................CAAGGGTGATAAGCAAGAAGTC................................................................................	22	20	0.05	1	0	0	0	0	1	0	0
...............................................................AGTCACTAAGATTGAAACTGTC..............................................................	22	20	0.05	1	0	0	0	0	1	0	0
..........................CTCGTGTTATCAAGAAGGTCAAGGGT...............................................................................................	26	20	0.05	1	0	0	0	0	0	1	0
.............................GTGTTATCAAGAAGGTCAAGGGTGAT............................................................................................	26	20	0.05	1	0	0	0	0	1	0	0

dp5

CAAGCCCAAGAAGAAGAAGATCCGCACTCGGGTAATCAAGAAGGTCAAGGGCGACAAACAAGAAGTCACCAAGATCGAAACCGTCGAGGAGGATGACAAGCCTTCGGAGACAACAGTCACCGTCGAAGAGGCTGCTTACGA------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....................................................................CAAGATCGAAACCGTCGAGGAGG.......................................................	23	20	7.90	158	0	149	1	0	0	0	1	0	7	0
.....................................................................CAAGATCGAAACCGTCGAGGAGGA......................................................	24	20	3.50	70	0	65	0	0	0	0	0	5	0	0
......................................................................AAGATCGAAACCGTCGAGGAGG.......................................................	22	20	2.40	48	0	48	0	0	0	0	0	0	0	0
...........................................................................................GATGACAAGCCTTCGGAGACAACA................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	2
.....CCAAGAAGAAGAAGATCCGCACT.......................................................................................................................	23	20	1.70	34	0	31	0	0	0	0	1	2	0	0
.....................................................................CAAGATCGAAACCGTCGAGGA.........................................................	21	20	1.50	30	0	30	0	0	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGGAGGA......................................................	23	20	1.45	29	0	29	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGG..........................................................	20	20	1.15	23	0	23	0	0	0	0	0	0	0	0
.....CCAAGAAGAAGAAGATCCGCAC........................................................................................................................	22	20	1.05	21	0	18	0	0	0	0	0	3	0	0
......................................................................AAGATCGAAACCGTCGAGGAG........................................................	21	20	0.80	16	0	16	0	0	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGGAGGAT.....................................................	24	20	0.55	11	0	11	0	0	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGGA.........................................................	20	20	0.45	9	0	9	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAG...........................................................	19	20	0.40	8	0	7	0	0	0	0	0	1	0	0
....................................................................CCAAGATCGAAACCGTCGAGGAG........................................................	23	20	0.35	7	0	7	0	0	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGG..........................................................	19	20	0.35	7	0	7	0	0	0	0	0	0	0	0
......................................AGAAGGTCAAGGGCGACAAACAAG.....................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACAAACAA......................................................................................	24	6	0.33	2	0	1	0	0	0	0	1	0	0	0
....................................CAAGAAGGTCAAGGGCGACAAAC........................................................................................	23	6	0.33	2	0	0	0	0	0	1	1	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGAGGATG....................................................	26	20	0.30	6	0	4	0	0	0	0	0	2	0	0
.......................................................AAACAAGAAGTCACCAAGATC.......................................................................	21	7	0.29	2	0	2	0	0	0	0	0	0	0	0
.................................AATCAAGAAGGTCAAGGGC...............................................................................................	19	20	0.25	5	0	5	0	0	0	0	0	0	0	0
.........................................................................ATCGAAACCGTCGAGGAGG.......................................................	19	20	0.25	5	0	5	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGAGGAT.....................................................	25	20	0.25	5	0	5	0	0	0	0	0	0	0	0
...........................................GTCAAGGGCGACAAACAAGAAGTCACC.............................................................................	27	5	0.20	1	0	0	0	0	1	0	0	0	0	0
......CAAGAAGAAGAAGATCCGCACT.......................................................................................................................	22	20	0.20	4	0	4	0	0	0	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGTCGAGGAG........................................................	25	20	0.20	4	0	4	0	0	0	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGTCGAGG..........................................................	23	20	0.20	4	0	4	0	0	0	0	0	0	0	0
.....CCAAGAAGAAGAAGATCCGCACTCGGG...................................................................................................................	27	15	0.20	3	0	3	0	0	0	0	0	0	0	0
............................................................................GAAACCGTCGAGGAGGATG....................................................	19	20	0.20	4	0	3	0	0	0	1	0	0	0	0
.....CCAAGAAGAAGAAGATCCGCACTCGG....................................................................................................................	26	16	0.19	3	0	3	0	0	0	0	0	0	0	0
.......................................GAAGGTCAAGGGCGACAAACAAGA....................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACAAACAAGG....................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACAAACA.......................................................................................	23	6	0.17	1	0	0	0	0	0	0	1	0	0	0
...............................................AGGGCGACAAACAAGAAGT.................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACAAA.........................................................................................	21	6	0.17	1	0	0	0	0	0	0	1	0	0	0
.......................................GAAGGTCAAGGGCGACAAAC........................................................................................	20	6	0.17	1	0	0	0	0	0	0	1	0	0	0
........................................AAGGTCAAGGGCGACAAACAA......................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................GTCAAGGGCGACAAACAAGAAGT.................................................................................	23	6	0.17	1	0	0	0	0	1	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACAAAC........................................................................................	22	6	0.17	1	0	0	0	0	0	0	1	0	0	0
........................................................................GATCGAAACCGTCGAGGAG........................................................	19	20	0.15	3	0	3	0	0	0	0	0	0	0	0
...............................GTAATCAAGAAGGTCAAGGGCG..............................................................................................	22	20	0.15	3	0	3	0	0	0	0	0	0	0	0
........................................................................GATCGAAACCGTCGAGGAGGATG....................................................	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0
....................................................................................CGAGGAGGATGACAAGCCTTC..........................................	21	20	0.15	3	0	1	2	0	0	0	0	0	0	0
......CAAGAAGAAGAAGATCCGCACTCG.....................................................................................................................	24	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.....CCAAGAAGAAGAAGATCCGCACTT......................................................................................................................	24	20	0.15	3	0	3	0	0	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGGAGGATG....................................................	25	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.....CCAAGAAGAAGAAGATCCGCACTCGGGT..................................................................................................................	28	15	0.13	2	0	1	1	0	0	0	0	0	0	0
......CAAGAAGAAGAAGATCCGCACTCGGG...................................................................................................................	26	16	0.13	2	0	2	0	0	0	0	0	0	0	0
............................CGGGTAATCAAGAAGGTCAAGGGC...............................................................................................	24	16	0.13	2	0	0	0	0	0	0	1	0	0	1
...............GAAGATCCGCACTCGGGTAAT...............................................................................................................	21	17	0.12	2	1	0	0	0	0	0	1	0	0	0
......CAAGAAGAAGAAGATCCGCACTCGG....................................................................................................................	25	17	0.12	2	0	2	0	0	0	0	0	0	0	0
............................CGGGTAATCAAGAAGGTCAAGG.................................................................................................	22	18	0.11	2	0	2	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGAGGATGA...................................................	27	20	0.10	2	0	1	0	1	0	0	0	0	0	0
.......................................................................AGATCGAAACCGTCGAGGA.........................................................	19	20	0.10	2	0	2	0	0	0	0	0	0	0	0
................................................................GTCACCAAGATCGAAACCGT...............................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
...................................................................................TCGAGGAGGATGACAAGCCTT...........................................	21	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.........................................................................ATCGAAACCGTCGAGGAGGATGACAAGC..............................................	28	20	0.10	2	0	1	0	0	0	0	1	0	0	0
.......................................................................AGATCGAAACCGTCGAGGAG........................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.AAGCCCAAGAAGAAGAAGATC.............................................................................................................................	21	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGT.........................................................	21	20	0.10	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................GATGACAAGCCTTCGGAGA.....................................	19	20	0.10	2	0	1	0	0	1	0	0	0	0	0
................................TAATCAAGAAGGTCAAGGGC...............................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.......AAGAAGAAGAAGATCCGCACTCG.....................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
................................TAATCAAGAAGGTCAAGGGCGACAA..........................................................................................	25	20	0.10	2	0	1	0	0	0	1	0	0	0	0
............................................................................GAAACCGTCGAGGAGGAT.....................................................	18	20	0.10	2	0	2	0	0	0	0	0	0	0	0
...............................GTAATCAAGAAGGTCAAGGGC...............................................................................................	21	20	0.10	2	0	1	0	0	1	0	0	0	0	0
.......AAGAAGAAGAAGATCCGCACTCGGG...................................................................................................................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0
...........................TCGGGTAATCAAGAAGGTCAAGGGC...............................................................................................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0
...GCCCAAGAAGAAGAAGATCCGCACTCGG....................................................................................................................	28	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.........GAAGAAGAAGATCCGCACTCGGGTAAT...............................................................................................................	27	16	0.06	1	0	0	0	0	0	0	1	0	0	0
........AGAAGAAGAAGATCCGCACTCGGGTAAT...............................................................................................................	28	16	0.06	1	0	0	0	0	0	0	1	0	0	0
.........GAAGAAGAAGATCCGCACTCGGGT..................................................................................................................	24	16	0.06	1	0	0	0	0	1	0	0	0	0	0
..............AGAAGATCCGCACTCGGGTAAT...............................................................................................................	22	17	0.06	1	0	0	0	0	1	0	0	0	0	0
.............AAGAAGATCCGCACTCGGGTA.................................................................................................................	21	17	0.06	1	0	1	0	0	0	0	0	0	0	0
....................TCCGCACTCGGGTAATCAAGAAGGT......................................................................................................	25	17	0.06	1	0	1	0	0	0	0	0	0	0	0
........................CACTCGGGTAATCAAGAAGGTCAAGGG................................................................................................	27	17	0.06	1	0	1	0	0	0	0	0	0	0	0
...........AGAAGAAGATCCGCACTCGGGT..................................................................................................................	22	17	0.06	1	0	0	0	0	0	0	1	0	0	0
.............AAGAAGATCCGCACTCGGGTAA................................................................................................................	22	17	0.06	1	0	0	0	0	0	1	0	0	0	0
.......AAGAAGAAGAAGATCCGCACTCGG....................................................................................................................	24	17	0.06	1	0	1	0	0	0	0	0	0	0	0
..........AAGAAGAAGATCCGCACTCGGGTAAT...............................................................................................................	26	17	0.06	1	0	0	0	0	0	0	1	0	0	0
.................AGATCCGCACTCGGGTAATC..............................................................................................................	20	17	0.06	1	0	0	1	0	0	0	0	0	0	0
..................GATCCGCACTCGGGTAATC..............................................................................................................	19	17	0.06	1	0	1	0	0	0	0	0	0	0	0
............GAAGAAGATCCGCACTCGGGTA.................................................................................................................	22	17	0.06	1	0	1	0	0	0	0	0	0	0	0
..............AGAAGATCCGCACTCGGGT..................................................................................................................	19	17	0.06	1	0	1	0	0	0	0	0	0	0	0
............................CGGGTAATCAAGAAGGTCAAG..................................................................................................	21	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.................................................................................CGTCGAGGAGGATGACAAGCCTTCGGA.......................................	27	19	0.05	1	0	0	0	0	1	0	0	0	0	0
...................................................................ACCAAGATCGAAACCGTCGAG...........................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................CCGTCGAGGAGGATGACAAGC..............................................	21	20	0.05	1	0	0	0	0	0	1	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGA..........................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......CAAGAAGAAGAAGATCCG...........................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................ATGACAAGCCTTCGGAGA.....................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...GCCCAAGAAGAAGAAGATCCGCA.........................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....CCAAGAAGAAGAAGATCCG...........................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................CCAAGATCGAAACCGTCGAGGA.........................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAG...........................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................ACCGTCGAGGAGGATGACAAGC..............................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....CCAAGAAGAAGAAGATCCGCACTCGT....................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........AAGAAGAAGATCCGCACT.......................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................ATCAAGAAGGTCAAGGGC...............................................................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..AGCCCAAGAAGAAGAAGATCCGCAC........................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................TAATCAAGAAGGTCAAGGGCGA.............................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...................................TCAAGAAGGTCAAGGGCGACAA..........................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................ACCGTCGAGGAGGATGACA.................................................	19	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..........................................................................TCGAAACCGTCGAGGAGGATGA...................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................AGAAGGTCAAGGGCGACA...........................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGTCGAGGAGG.......................................................	26	20	0.05	1	0	0	0	0	0	0	1	0	0	0
...................................................................ACCAAGATCGAAACCGTCGAGG..........................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................TAATCAAGAAGGTCAAGGGCG..............................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................ATCGAAACCGTCGAGGAGGAC.....................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0
.........................................................................ATCGAAACCGTCGAGGAGGA......................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACA...........................................................................................	19	20	0.05	1	0	0	0	0	0	1	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGAGGTAA....................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................GTCGAGGAGGATGACAAGCCT............................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................GAAGTCACCAAGATCGAAAC..................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.AAGCCCAAGAAGAAGAAGATCCGCAC........................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......CAAGAAGAAGAAGATCCGCA.........................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................CGAAACCGTCGAGGAGGATG....................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................GAAGTCACCAAGATCGAAACCGTCG.............................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................CCGTCGAGGAGGATGACAAGCCT............................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................GGATGACAAGCCTTCGGAGAC....................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.......AAGAAGAAGAAGATCCGCAC........................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGTCGAGGAGGA......................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGAGA.......................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................GATGACAAGCCTTCGGAG......................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................GATCGAAACCGTCGAGGA.........................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................AAACCGTCGAGGAGGATG....................................................	18	20	0.05	1	1	0	0	0	0	0	0	0	0	0
...GCCCAAGAAGAAGAAGATCCGCACT.......................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................TCACCAAGATCGAAACCGTCGAGG..........................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................TCGAAACCGTCGAGGAGG.......................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..............................................................................AACCGTCGAGGAGGATGACAAGCCTTC..........................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................CCGTCGAGGAGGATGACAAGCCTT...........................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................AGTCACCAAGATCGAAACCGTCGA............................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................GAAACCGTCGAGGAGGATGACAAGCCT............................................	27	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.AAGCCCAAGAAGAAGAAGATCC............................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................GTCACCAAGATCGAAACCGTC..............................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CAAGATCGAAACCGTCGAGGAGGATT....................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................GAGGATGACAAGCCTTCGGAGAC....................................	23	20	0.05	1	0	0	0	1	0	0	0	0	0	0
.................................AATCAAGAAGGTCAAGGGCGACA...........................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................AAGAAGGTCAAGGGCGACAA..........................................................................................	20	20	0.05	1	0	0	0	0	0	1	0	0	0	0
...........AGAAGAAGATCCGCACTCGT....................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................GATCGAAACCGTCGAGGAGGAT.....................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..AGCCCAAGAAGAAGAAGATC.............................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................CGAAACCGTCGAGGAGGATGACAAGC..............................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........GAAGAAGAAGATCCGCACTCG.....................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................CGTCGAGGAGGATGACAAG...............................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................GATCGAAACCGTCGAGGAGG.......................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................CGAAACCGTCGAGGAGGATGAC..................................................	22	20	0.05	1	0	0	0	1	0	0	0	0	0	0
......................................................................AAGATCGAAACCGTCGAGGAGGATGA...................................................	26	20	0.05	1	0	0	0	0	0	0	0	1	0	0

droPer2

CAAACCCAAGACGAAGAAGATACGCACTCGCGTAATTAAGAAGGTCAAGGGTGATAAGCAAGAGGTCACCAAGATCGAAACCGTCGAAGAGGATAACAAGAAGCCAGAGACAACAGTCACGGTGGAAGAAACT------GA------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................................CGAAACCGTCGAAGAGGAT.....................................................	19	1	3.00	3	3	0	0	0	0	0
........................................................................GATCGAAACCGTCGAAGA.........................................................	18	1	2.00	2	2	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGTCGAAGAG........................................................	25	1	1.00	1	1	0	0	0	0	0
......................................AGAAGGTCAAGGGTGATAAG.........................................................................................	20	1	1.00	1	0	0	0	0	0	1
..................................................................CACCAAGATCGAAACCGT...............................................................	18	4	0.75	3	3	0	0	0	0	0
................................................................GTCACCAAGATCGAAACC.................................................................	18	4	0.50	2	2	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGTCG.............................................................	20	4	0.25	1	1	0	0	0	0	0
..................................................................CACCAAGATCGAAACCGG...............................................................	18	4	0.25	1	1	0	0	0	0	0

droWil2

CAAGCCTAAAAAGAAGAAGATCCGCACACGGGTCATCAAGAAGGTGAAGGGTGACAAACAAGAAGTCACAAAGATTGAAACTGTCGAAGAGGATGACAAACAACCCGAGACAACTGTAACAGTCGAAGAACTCCCTGTGGA------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...............................GTCATCAAGAAGGTGAAGGGT...............................................................................................	21	1	3.00	3	0	0	1	2	0
...............................GTCATCAAGAAGGTGAAGGGTGA.............................................................................................	23	1	2.00	2	0	0	0	2	0
.................................CATCAAGAAGGTGAAGGGTGAC............................................................................................	22	1	1.00	1	0	0	1	0	0
........AAAAGAAGAAGATCCGCACACGGGT..................................................................................................................	25	1	1.00	1	0	0	1	0	0
........AAAAGAAGAAGATCCGCACACGGG...................................................................................................................	24	1	1.00	1	0	1	0	0	0
.............................GGGTCATCAAGAAGGTGAAGGGTGACA...........................................................................................	27	1	1.00	1	0	0	1	0	0
..............AGAAGATCCGCACACGGGT..................................................................................................................	19	1	1.00	1	0	0	0	1	0
....................................................................................CGAAGAGGATGACAAACAACCCGAGAC....................................	27	4	0.50	2	2	0	0	0	0
..................................................................................................AACAACCCGAGACAACTGTAACAGTC.......................	26	2	0.50	1	0	0	0	1	0
.................................................................................................AAACAACCCGAGACAACTGTAACAG.........................	25	2	0.50	1	0	1	0	0	0
..................................................................CACAAAGATTGAAACTGT...............................................................	18	8	0.38	3	2	0	0	1	0
.............................................................GAAGTCACAAAGATTGAAACTGTCGA............................................................	26	3	0.33	1	0	1	0	0	0
...................................................................ACAAAGATTGAAACTGTC..............................................................	18	3	0.33	1	0	0	0	1	0
....................................................................CAAAGATTGAAACTGTCGA............................................................	19	3	0.33	1	0	0	1	0	0
........................................................................GATTGAAACTGTCGAAGAGGATGAC..................................................	25	3	0.33	1	0	0	1	0	0
..................................................................CACAAAGATTGAAACTGTCGAAGAGGAT.....................................................	28	3	0.33	1	0	0	1	0	0
........................................................................GATTGAAACTGTCGAAGAGGAT.....................................................	22	3	0.33	1	1	0	0	0	0
......................................................CAAACAAGAAGTCACAAAGATTGAAAC..................................................................	27	7	0.29	2	0	2	0	0	0
............................................................................................ATGACAAACAACCCGAGACAACTGT..............................	25	4	0.25	1	0	1	0	0	0
....................................................................................................................TAACAGTCGAAGAACTCCCTGTGGA------	25	4	0.25	1	1	0	0	0	0
...........................................................................................................................CGAAGAACTCCCTGTGGA------	18	4	0.25	1	1	0	0	0	0
........................................................AACAAGAAGTCACAAAGATTGAAACT.................................................................	26	8	0.25	2	0	0	1	1	0
...............................................................................................................AACTGTAACAGTCGAAGAACTCCC............	24	4	0.25	1	0	1	0	0	0
.................................................................................................................CTGTAACAGTCGAAGAACTCCCTGT.........	25	4	0.25	1	0	1	0	0	0
........................................................................................GAGGATGACAAACAACCCGAGACA...................................	24	4	0.25	1	0	1	0	0	0
.....................................................................................................................AACAGTCGAAGAACTCCCTGG.........	21	4	0.25	1	1	0	0	0	0
..................................................................................................................TGTAACAGTCGAAGAACTCCC............	21	4	0.25	1	0	0	1	0	0
CAAGCCTAAAAAGAAGAAGATCC............................................................................................................................	23	6	0.17	1	0	0	1	0	0
..AGCCTAAAAAGAAGAAGATCC............................................................................................................................	21	6	0.17	1	0	0	0	1	0
......TAAAAAGAAGAAGATCCGCACAC......................................................................................................................	23	6	0.17	1	0	0	1	0	0
.AAGCCTAAAAAGAAGAAGATC.............................................................................................................................	21	6	0.17	1	0	0	0	1	0
......................................................CAAACAAGAAGTCACAAAGATTG......................................................................	23	12	0.17	2	0	2	0	0	0
....................................................................................CGAAGAGGATGACAAACAAC...........................................	20	6	0.17	1	0	0	0	1	0
.......................................................AAACAAGAAGTCACAAAG..........................................................................	18	15	0.13	2	0	0	0	2	0
.......................................................AAACAAGAAGTCACAAAGATTGAAAC..................................................................	26	8	0.13	1	0	1	0	0	0
...............................................................AGTCACAAAGATTGAAACTGT...............................................................	21	8	0.13	1	0	0	0	1	0
....................................................GACAAACAAGAAGTCACAAAGATTGAA....................................................................	27	8	0.13	1	0	0	0	1	0
.........................................................ACAAGAAGTCACAAAGATTGAAACTGC...............................................................	27	8	0.13	1	1	0	0	0	0
........................................................AACAAGAAGTCACAAAGATTGAAACTG................................................................	27	8	0.13	1	1	0	0	0	0
......................................................CAAACAAGAAGTCACAAA...........................................................................	18	13	0.08	1	0	0	0	1	0
........................................................AACAAGAAGTCACAAAGATT.......................................................................	20	14	0.07	1	0	0	0	0	1
.....................................................................................GAAGAGGATGACAAACAACC..........................................	20	20	0.05	1	0	0	1	0	0
...........AGAAGAAGATCCGCACAC......................................................................................................................	18	20	0.05	1	0	0	0	1	0
...............................................AGGGTGACAAACAAGAAGT.................................................................................	19	20	0.05	1	0	0	0	1	0
..............................................AAGGGTGACAAACAAGAAGT.................................................................................	20	20	0.05	1	0	0	0	1	0

droVir3

CAAGCCTAAGAAGAAGAAGATACGCACACGTGTTATCAAGAAGGTTAAGGGTGACAAACAAGAAGTCACCAAGATTGAAACCATCGAAGAGGATGACAAACAACCAGAGACAACTGTCACAGTGGAAGAGATTCCTGTGGA------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................GTTATCAAGAAGGTTAAGGGT...............................................................................................	21	20	0.25	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0
...............................GTTATCAAGAAGGTTAAGGGTGA.............................................................................................	23	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................TATCAAGAAGGTTAAGGGT...............................................................................................	19	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
.......................................................................................AGAGGATGACAAACAACCAGAGACAACT................................	28	9	0.11	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CGAAGAGGATGACAAACAACCA.........................................	22	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.......................................................AAACAAGAAGTCACCAAGA.........................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................CAAGATTGAAACCATCGAAGAGGAT.....................................................	25	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................AACCAGAGACAACTGTCACAGTGGA.....................	25	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GTTATCAAGAAGGTTAAGGGTGAC............................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................AAACAAGAAGTCACCAAGATT.......................................................................	21	20	0.10	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................TTAAGGGTGACAAACAAGAAGT.................................................................................	22	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................ACACGTGTTATCAAGAAGGTTAAGGGT...............................................................................................	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..................................................................................................................TGTCACAGTGGAAGAGAT...............	18	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................CAAGATTGAAACCATCGAAGAGGATG....................................................	26	20	0.10	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GACAAACAACCAGAGACAACTGTCA............................	25	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................ATGACAAACAACCAGAGA.....................................	18	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................CAAACAACCAGAGACAACTGT..............................	21	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GACAAACAACCAGAGACAACTGT..............................	23	18	0.06	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GATGACAAACAACCAGAGACA...................................	21	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.......................GCACACGTGTTATCAAGAAGG.......................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................ATCAAGAAGGTTAAGGGTGACA...........................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GATACGCACACGTGTTATCAAGA..........................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TAAGAAGAAGAAGATACGCACACGTGT..................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................CAAGATTGAAACCATCGAAGA.........................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGAAGAAGATACGCACACG.....................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CACCAAGATTGAAACCATCGAA...........................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................CAAACAAGAAGTCACCAAGAT........................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ACCATCGAAGAGGATGAC..................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................GAAGTCACCAAGATTGAAACCATC..............................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................CCAAGATTGAAACCATCGAAGAGGAT.....................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................AGGTTAAGGGTGACAAAC........................................................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GCACACGTGTTATCAAGAAGGTTAAG..................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................TCACCAAGATTGAAACCATC..............................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
............................................................................GAAACCATCGAAGAGGATGAC..................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................CAAGATTGAAACCATCGAAGAGGATGA...................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................CCAAGATTGAAACCATCGAAG..........................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AGAAGATACGCACACGTGTTATCA.............................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................AAGAAGTCACCAAGATTGAAACCAT...............................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AGAAGGTTAAGGGTGACAAACA.......................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TTATCAAGAAGGTTAAGGGTG..............................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................AAGGTTAAGGGTGACAAACAAGAAGT.................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................................................CAAACAAGAAGTCACCAAGATTGAA....................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AGAGACAACTGTCACAGTGGAA....................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................ACGTGTTATCAAGAAGGTTAAGGGT...............................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...GCCTAAGAAGAAGAAGATACGCACACGT....................................................................................................................	28	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................ATTGAAACCATCGAAGAGGATGA...................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TTATCAAGAAGGTTAAGGGTGAC............................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................AAGAAGTCACCAAGATTGAAACC.................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................CAAGAAGGTTAAGGGTGT.............................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGTGTTATCAAGAAGGTTAAGGGTGA.............................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................AACCAGAGACAACTGTCACAGT........................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................AGACAACTGTCACAGTGGAA....................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GATACGCACACGTGTTATCAA............................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................CAAGAAGTCACCAAGATTG......................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................AAGAAGTCACCAAGATTGAA....................................................................	20	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AAGAAGAAGATACGCACACGTGTTAT...............................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GAAGATACGCACACGTGTTAT...............................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................GGTGACAAACAAGAAGTC................................................................................	18	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GAGACAACTGTCACAGTGGAA....................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GAAGAAGATACGCACACGT....................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................CAACTGTCACAGTGGAAGAGATTCCTGT.........	28	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGTGTTATCAAGAAGGTTAAGGGTGACAA..........................................................................................	29	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................CGCACACGTGTTATCAAGAAGGTT.....................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................ATCAAGAAGGTTAAGGGTGA.............................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................AGAAGTCACCAAGATTGAAACCATCG.............................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................CACAGTGGAAGAGATTCCTGTGGA------	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GAAGAAGAAGATACGCACACG.....................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AAGATTGAAACCATCGAAGAGGAT.....................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................ACAGTGGAAGAGATTCCTGTGGA------	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................GACAACTGTCACAGTGGAAGAGATTCCT...........	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................CACAGTGGAAGAGATTCCTGT.........	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................AGATACGCACACGTGTTATCAAGAAG........................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................AACCAGAGACAACTGTCAC...........................	19	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................CACACGTGTTATCAAGAAG........................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................GAAACCATCGAAGAGGATGACA.................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................GTTAAGGGTGACAAACAAGAAGT.................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................CAAGAAGTCACCAAGATTGAAACC.................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................................................................TTGAAACCATCGAAGAGGATGA...................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....CTAAGAAGAAGAAGATACGCAC........................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................AACCATCGAAGAGGATGACAAACAAC...........................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................TAAGGGTGACAAACAAGAAGT.................................................................................	21	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................ACACGTGTTATCAAGAAGG.......................................................................................................	19	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GAAGAAGATACGCACACGTG...................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GTTATCAAGAAGGTTAAGGGTGACAAA.........................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................CACCAAGATTGAAACCATC..............................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AGAAGATACGCACACGTGTTAT...............................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AGAGACAACTGTCACAGTGGAAGAGA................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CAAGCCCAAAAAGAAGAAGATACGCACACGTGTTATCAAGAAGGTTAAGGGTGATAAACAAGAAGTCACCAAGATTGAAACCGTCGAAGAAGATGACAAACAACCCGAAACTACTGTCACAGTTGAAGAAGTTCCAGTGGA------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............................GTTATCAAGAAGGTTAAGGGT...............................................................................................	21	12	2.00	24	10	0	0	0	0	14
.........................................AGGTTAAGGGTGATAAACAAGAAGT.................................................................................	25	1	1.00	1	1	0	0	0	0	0
..................................ATCAAGAAGGTTAAGGGT...............................................................................................	18	16	0.38	6	4	0	0	1	0	1
....................................................GATAAACAAGAAGTCACCAAG..........................................................................	21	3	0.33	1	1	0	0	0	0	0
.....................................................ATAAACAAGAAGTCACCAAGATTGAAA...................................................................	27	3	0.33	1	1	0	0	0	0	0
...............................GTTATCAAGAAGGTTAAGGGTG..............................................................................................	22	12	0.25	3	3	0	0	0	0	0
.......................................................AAACAAGAAGTCACCAAGATTGAAACCGT...............................................................	29	4	0.25	1	1	0	0	0	0	0
...........AGAAGAAGATACGCACACGT....................................................................................................................	20	20	0.20	4	4	0	0	0	0	0
..................................ATCAAGAAGGTTAAGGGTG..............................................................................................	19	16	0.19	3	3	0	0	0	0	0
..........................................................CAAGAAGTCACCAAGATTGAAACC.................................................................	24	6	0.17	1	0	0	0	0	1	0
............................................................AGAAGTCACCAAGATTGAAAC..................................................................	21	6	0.17	1	0	0	0	0	1	0
...............................GTTATCAAGAAGGTTAAGGG................................................................................................	20	20	0.15	3	0	0	0	0	0	3
............GAAGAAGATACGCACACGT....................................................................................................................	19	20	0.10	2	1	0	0	0	0	1
..............................TGTTATCAAGAAGGTTAAGGGTGA.............................................................................................	24	11	0.09	1	0	0	0	1	0	0
.............................GTGTTATCAAGAAGGTTAAGGGT...............................................................................................	23	11	0.09	1	1	0	0	0	0	0
...........................ACGTGTTATCAAGAAGGTTAAGGGT...............................................................................................	25	11	0.09	1	0	0	0	0	0	1
.............................GTGTTATCAAGAAGGTTAAGGGTG..............................................................................................	24	11	0.09	1	0	0	0	0	0	1
.........................ACACGTGTTATCAAGAAGGTTAAGGGT...............................................................................................	27	11	0.09	1	0	0	0	0	0	1
..........................CACGTGTTATCAAGAAGGTTAAGGGT...............................................................................................	26	11	0.09	1	0	0	0	0	0	1
............................CGTGTTATCAAGAAGGTTAAGGGT...............................................................................................	24	11	0.09	1	0	0	0	0	0	1
...............................GTTATCAAGAAGGTTAAGGGTGA.............................................................................................	23	12	0.08	1	0	0	0	0	0	1
...................................TCAAGAAGGTTAAGGGTGATAAACA.......................................................................................	25	14	0.07	1	1	0	0	0	0	0
....................................CAAGAAGGTTAAGGGTGATAA..........................................................................................	21	14	0.07	1	0	0	0	0	0	1
.............................................TAAGGGTGATAAACAAGA....................................................................................	18	15	0.07	1	1	0	0	0	0	0
..........................................GGTTAAGGGTGATAAACAAGA....................................................................................	21	15	0.07	1	0	0	0	0	0	1
......................................AGAAGGTTAAGGGTGATAA..........................................................................................	19	15	0.07	1	1	0	0	0	0	0
................................TTATCAAGAAGGTTAAGGGT...............................................................................................	20	16	0.06	1	1	0	0	0	0	0
....................................CAAGAAGGTTAAGGGTGATA...........................................................................................	20	16	0.06	1	0	0	0	0	0	1
...........................................................................................................................TGAAGAAGTTCCAGTGGA------	18	16	0.06	1	1	0	0	0	0	0
................................TTATCAAGAAGGTTAAGGGTG..............................................................................................	21	16	0.06	1	1	0	0	0	0	0
.................................TATCAAGAAGGTTAAGGGT...............................................................................................	19	16	0.06	1	0	0	0	0	0	1
......................................................................................................................ACAGTTGAAGAAGTTCCAGT.........	20	16	0.06	1	1	0	0	0	0	0
.........................................................................................................................GTTGAAGAAGTTCCAGTGGA------	20	16	0.06	1	0	0	0	0	0	1
.................................TATCAAGAAGGTTAAGGGTG..............................................................................................	20	16	0.06	1	1	0	0	0	0	0
.....................................................................CAAGATTGAAACCGTCGAAGA.........................................................	21	20	0.05	1	0	0	0	0	0	1
.....................................................................................GAAGAAGATGACAAACAACCCGAAA.....................................	25	20	0.05	1	0	0	0	0	0	1
..........................CACGTGTTATCAAGAAGGTTAAG..................................................................................................	23	20	0.05	1	0	0	0	0	0	1
..........................................................................................................GAAACTACTGTCACAGTTGAAGAA.................	24	20	0.05	1	1	0	0	0	0	0
........................................................................................GAAGATGACAAACAACCCGAAACTA..................................	25	20	0.05	1	1	0	0	0	0	0
................................................................GTCACCAAGATTGAAACCGTCGAAG..........................................................	25	20	0.05	1	0	0	0	0	0	1
..................................................................CACCAAGATTGAAACCGT...............................................................	18	20	0.05	1	0	0	0	0	1	0
.....................................................................................GAAGAAGATGACAAACAACCCGA.......................................	23	20	0.05	1	0	0	0	0	1	0
.............................................................................AAACCGTCGAAGAAGATGACA.................................................	21	20	0.05	1	1	0	0	0	0	0
........AAAAGAAGAAGATACGCACACGTGT..................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.................................................................................................AAACAACCCGAAACTACTGTCA............................	22	20	0.05	1	1	0	0	0	0	0
................................................................................................................ACTGTCACAGTTGAAGAAGT...............	20	20	0.05	1	0	0	0	0	0	1
................................................................................CCGTCGAAGAAGATGACAAACAACC..........................................	25	20	0.05	1	0	0	0	0	1	0
......................................................................AAGATTGAAACCGTCGAAGAAGATGACA.................................................	28	20	0.05	1	0	0	0	0	0	1
....................................................................................CGAAGAAGATGACAAACAACCC.........................................	22	20	0.05	1	0	0	0	0	0	1
.....................................................................CAAGATTGAAACCGTCGAAGAAGATGAC..................................................	28	20	0.05	1	0	0	0	0	0	1
.....CCAAAAAGAAGAAGATACGC..........................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
............GAAGAAGATACGCACACGTGTTATCA.............................................................................................................	26	20	0.05	1	0	0	1	0	0	0
.....................................................................................GAAGAAGATGACAAACAACCCGAA......................................	24	20	0.05	1	1	0	0	0	0	0
..........................................................................TTGAAACCGTCGAAGAAGATG....................................................	21	20	0.05	1	1	0	0	0	0	0
.....................ACGCACACGTGTTATCAAGAAGGT......................................................................................................	24	20	0.05	1	1	0	0	0	0	0
...............................................................................ACCGTCGAAGAAGATGACAAACAACCCG........................................	28	20	0.05	1	1	0	0	0	0	0
.............................................................................................TGACAAACAACCCGAAAC....................................	18	20	0.05	1	0	0	0	0	1	0
.................................................................TCACCAAGATTGAAACCGTCGAAGAA........................................................	26	20	0.05	1	0	0	0	0	0	1
..............AGAAGATACGCACACGTGTTATCAAGAA.........................................................................................................	28	20	0.05	1	1	0	0	0	0	0
....................................................................CCAAGATTGAAACCGTCGAAG..........................................................	21	20	0.05	1	1	0	0	0	0	0
.........................................................................ATTGAAACCGTCGAAGAAGA......................................................	20	20	0.05	1	1	0	0	0	0	0
..............................................................................................GACAAACAACCCGAAACTACT................................	21	20	0.05	1	1	0	0	0	0	0
...........................................................................................GATGACAAACAACCCGAAACT...................................	21	20	0.05	1	0	0	0	0	1	0
.AAGCCCAAAAAGAAGAAGATACGC..........................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
....................................................................................CGAAGAAGATGACAAACAACCCG........................................	23	20	0.05	1	1	0	0	0	0	0
..............................................................................................GACAAACAACCCGAAACTACTGTC.............................	24	20	0.05	1	1	0	0	0	0	0
...........................ACGTGTTATCAAGAAGGTTAAGG.................................................................................................	23	20	0.05	1	0	0	0	0	0	1
............................................................................................ATGACAAACAACCCGAAACTACTG...............................	24	20	0.05	1	1	0	0	0	0	0
...........................................................................................................AAACTACTGTCACAGTTGAAGAAGT...............	25	20	0.05	1	1	0	0	0	0	0
......CAAAAAGAAGAAGATACGCACACGTGTT.................................................................................................................	28	20	0.05	1	0	0	0	0	0	1

droGri2

CAAGCCAAAGAAGAAGAAGATACGCACTCGTGTTATCAAGAAGGTTAAGGGTGATAAACAAGAAGTTACCAAGATCGAAACCGTCGAGGAGGATGACAAAGAACCAGAGACAACTGTCACTGTGGAAGAGGTTCCTGTGGA------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.......................................................................AGATCGAAACCGTCGAGGAGGA......................................................	22	20	0.05	1	1	0
..AGCCAAAGAAGAAGAAGATACGCACT.......................................................................................................................	26	20	0.05	1	0	1
..........................CTCGTGTTATCAAGAAGGTTAAGGG................................................................................................	25	20	0.05	1	0	1

dan_342

scaffold_12571:4676-4716 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads