ID:

dan_3414

 Coordinate:

scaffold_9997:28299-28449 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.1 -29.0 -28.8

Flybase annnotation

exon [dana_GLEANR_21649:2]; CDS [Dana\GF19572-cds]; intron [Dana\GF19572-in]

Repeatable elements

NameClassFamilyStrand
Gypsy1-I_DM-intLTRGypsy+
mature
  1. scaffold_1173:1343-1368 +
  2. scaffold_7569:756-781 +
  3. scaffold_8697:10808-10833 +
  4. scaffold_8697:13822-13847 +
  5. scaffold_8943:6499-6524 +
  6. scaffold_9030:820-845 +
  7. dan_3414  scaffold_9997:28404-28429 +
  8. scaffold_12578:18019-18044 +
  9. scaffold_12578:22659-22684 +
  10. scaffold_12911:182943-182968 +
  11. scaffold_12911:382158-382183 +
  12. scaffold_12948:182647-182672 +
  13. scaffold_13045:400031-400056 +
  14. scaffold_13045:438217-438242 +
  15. scaffold_13165:343307-343332 +
  16. scaffold_13221:127767-127792 +
  17. scaffold_13230:78084-78109 +
  18. scaffold_13250:1606969-1606994 +
  19. scaffold_13280:1114598-1114623 +
  20. scaffold_13280:1202492-1202517 +
  21. scaffold_1696:720-745 +
  22. scaffold_8771:1974-1999 +
  23. scaffold_8771:44447-44472 +
  24. scaffold_9072:598-623 +
  25. scaffold_10901:75-100 +
  26. scaffold_12247:143-168 +
  27. scaffold_12911:1376406-1376431 +
  28. scaffold_13034:1760799-1760824 +
  29. scaffold_13079:644138-644163 +
  30. scaffold_13091:1251-1276 +
  31. scaffold_13099:2255263-2255288 +
  32. scaffold_13221:110873-110898 +
  33. scaffold_13228:611553-611578 +
  34. scaffold_13230:1241796-1241821 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAAAATGGCGAACGAAATAGTCGATTCCTGCAGGGCTTGCGCCAAGACATCCAAAGAAACAGAAGCTTGGCGAAACACCAATCCCATCTCATGTAGGAGAAATGCTACACATCTTCTCCACGGATAAAAAGTATTTCCTTACGTGCATCGACAAATTCTCGAAATTTGCCGTCGTCCAACCGGCCCCTCTAGATCCATAGAGGACCTCAAACCAGCGCTACTACAGCTGATGAACAACTTCCCTAAGGAA
**************************************************......((...(((.(((((((((................((((((((.((((((((....((((.......))))....))))))))))))))))...((.((((((.....)))))).))))).)))...)))...)))...)).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
...................................................................................................................GCTCAACGGATAAAAGGTA..................................................................................................................... 19 3 20 1.25 25 6 11 0 8 0
....................................................................................................................CTCAACGGATAAAAGGTACT................................................................................................................... 20 3 20 0.85 17 5 11 0 1 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTGGTT.......................................................................... 22 2 20 0.35 7 0 0 7 0 0
...............................................ACATCCAAAGAAACAGAAGCTTGGC................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCCAAC...................................................................... 26 0 20 0.25 5 3 0 2 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCC......................................................................... 23 0 20 0.20 4 4 0 0 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTGGT........................................................................... 21 1 20 0.20 4 0 0 4 0 0
...................................................................................................................GCTCAACGGATAAAAAGTACT................................................................................................................... 21 3 20 0.10 2 0 2 0 0 0
.........................................................AAACGGAAGTTTGGCGCAAC.............................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 1 0
..............................................................................................................................................................................................TAGATCCATAGAGGACCTCAAACCA.................................... 25 0 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................AAATTCTCGAAATTTGCCGTCGTCC......................................................................... 25 0 20 0.05 1 0 0 1 0 0
.....ATGGCGAACGAAATAGTCG................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................GGACCTCAAACCAGCGCTACTACAGC....................... 26 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGT.............................................................................. 18 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................GACCTCAAACCAGCGCTACTACAGC....................... 25 0 20 0.05 1 0 0 1 0 0
.............................................................................................................................TAAAAAGTATTTCCTTACGTGCATCGACA................................................................................................. 29 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................TAAAAAGTATTTCCTTACGTGCATCGA................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTCGTA.......................................................................... 22 1 20 0.05 1 1 0 0 0 0
............ACGAAATAGTCGATTCCTGC........................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
............................................TTGACATCCAAAAAAACAGA........................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0
...........AACGAAATAGTCGATTCCTGCAGG........................................................................................................................................................................................................................ 24 0 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................................................GAGGACCTCAAACCAGCGCTACTACAGG....................... 28 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................AATTCTCGAAATTTGCCGTGGTC.......................................................................... 23 1 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................................................GAGGACCTCAAACCAGCGCTAC............................. 22 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCCAACCG.................................................................... 28 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................AGAGGACCTCAAACCAGCGCTACTACAGC....................... 29 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................CCATAGAGGACCTCAAACCAGC.................................. 22 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................GATCCATAGAGGACCTCAAACCA.................................... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTCGTC.......................................................................... 22 0 20 0.05 1 0 0 1 0 0
............................................................................................................................ATAAAAAGGATTTCCTTACGTCCATC..................................................................................................... 26 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................GCGCTACTACAGCTGATGAAC............... 21 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TCCATAGAGGACCTCAAACC..................................... 20 0 20 0.05 1 0 0 1 0 0
............ACGAAATAGTCGATTCCTGCA.......................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................GAGGACCTCAAACCAGCGCTACTAC.......................... 25 0 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCCA........................................................................ 24 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GGTTTTACCGCTTGCTTTATCAGCTAAGGACGTCCCGAACGCGGTTCTGTAGGTTTCTTTGTCTTCGAACCGCTTTGTGGTTAGGGTAGAGTACATCCTCTTTACGATGTGTAGAAGAGGTGCCTATTTTTCATAAAGGAATGCACGTAGCTGTTTAAGAGCTTTAAACGGCAGCAGGTTGGCCGGGGAGATCTAGGTATCTCCTGGAGTTTGGTCGCGATGATGTCGACTACTTGTTGAAGGGATTCCTT
**************************************************......((...(((.(((((((((................((((((((.((((((((....((((.......))))....))))))))))))))))...((.((((((.....)))))).))))).)))...)))...)))...)).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
.....TACCGCTTGCTTTATCAGCTAAGGACGT.......................................................................................................................................................................................................................... 28 0 20 0.15 3 3 0 0 0 0
..............................................................................................................................................GCACGTAGCTGTTTAAGAGCTTT...................................................................................... 23 0 20 0.15 3 0 3 0 0 0
.............................................................................................................................................................................................................GGAGTTTGGTCGCGATGATGTCGAC..................... 25 0 20 0.15 3 3 0 0 0 0
..........................................................................................................................................GAATGCACGTAGCTGTTTAAGAGCT........................................................................................ 25 0 20 0.15 3 3 0 0 0 0
.....................................................................................................................................................................................................................GTCGCGATGATGTCGACTACTTGT.............. 24 0 20 0.10 2 2 0 0 0 0
.....................................................................CCGCTTTGTGGTTAGGGTAGAGTACAT........................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................CCTGGAGTTTGGTCGCGATGATGTCG....................... 26 0 20 0.05 1 1 0 0 0 0
..............................................................................GGTTAGGGTAGAGTACATCCT........................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................CACGTAGCTGTTTAAGAGCTTT...................................................................................... 22 0 20 0.05 1 0 1 0 0 0
................................................................................TTAGGGTAGAGTACATCCT........................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................TTAAGAGCTTTAAACGGCAGCAGGT........................................................................ 25 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................AGTTTGGTCGCGATGATGTCGA...................... 22 0 20 0.05 1 1 0 0 0 0
.............................................................................................................TGTAGAAGAGGTGCCTATTTTTCAT..................................................................................................................... 25 0 20 0.05 1 0 0 0 1 0
.................................................................................AAGGGTAGAGTACATCCTCTTTACGAT............................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................CCTGGAGTTTCGTCGCGATGACGT......................... 24 2 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................CTAGGTATCTCCTGGAGTTTGGTCGC................................. 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................CCTGTAGTTTGGTCGCGATGATGTCG....................... 26 1 20 0.05 1 1 0 0 0 0
...........TTGCTTTATCAGCTAAGGACGT.......................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1
...................................................................AACCGATTTGTGGTTAGGTTAG.................................................................................................................................................................. 22 2 20 0.05 1 0 0 0 0 1
........................................................................................................................................................................................GGGGAGATCTAGGTATCTCCTGGAGT......................................... 26 0 20 0.05 1 0 0 0 1 0
................................................................................................................AGAAGAGGTGCCTATTTTTCA...................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.GTTTTACCGCTTGCTTTATCAG.................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................GTTTGGTCGCGATGATGTCGACTAC.................. 25 0 20 0.05 1 1 0 0 0 0
GGTTTTACCGCTTGCTTTAT....................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTCGCGATGATGTCGACTACTT................ 23 0 20 0.05 1 0 0 1 0 0
.....................................................................CCGATTTGTGGTTAGGGTAGAGTACAT........................................................................................................................................................... 27 1 20 0.05 1 0 0 1 0 0
.........................................CGGTTCCGTAGGTGTCTTG............................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................GGAGATCTAGGTATCTCCTGGAGTG........................................ 25 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................TGCACGTAGCTGTTTAAGAGCT........................................................................................ 22 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................................CTCCTGGAGTTTGGTCGCGATGATGT......................... 26 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................GGGAGATCTAGGTATCTCCTGGAGTT........................................ 26 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................TAAAGGAATGCACGTAGCTGT................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
.................................................................CGAACCGCTTTGTGTTTAGGGTAGAGT............................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.........GCTTGCTTTATCAGCGAAGGACGT.......................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TGGAGTTTGGTCGCGATGATGTCGACT.................... 27 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................AAAGGAATGCACGTAGCTCTTTAAGAG.......................................................................................... 27 1 20 0.05 1 1 0 0 0 0
....TTACCGCTTGCTTTATCAGCTAAGGAC............................................................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_9997:28249-28499 + dan_3414 CCAAAATGGCGAACGAAATAGTCGATTCCTGCAGGGCTTGCGCCAA---------------GACATCCA-AAGAAACAGAAGCTTGGCGAAACACCAATCCCATCTCATGTAGGAGAAATGCTACAC------ATCTTCTCCACGGATAAAAAGTATTTCCTTACGTGCATCGACAAATTCTCGAAATTTGCCGTCGTCCAACCGGC-CCCTCTAGATCCATAGAGGACCTCAAACCAGCGCTACTACAGCTGATGAACAACTTCCCTAAGGAA
droBip1 scf7180000395039:4476-4747 + CCAAGCTAGCGAACGAAATAGTCGCTTCGTGCAAGACTTGCGCGAAA-GCTAAATACGACAGACATCCA-AAGAGACATGAGCTTGGCAAAACACCAATCCCATCTCAAGTAGGAGAAATGCTGCACATAGACATCTTCTCCACGGATAAAAAGTATTTCCTTACGTGCATCGACAAATTCACGAAATTTGCCGTTGTCCAACCAGTTCCCTCTAGAACTATAGGGGATCTCAAACCAGCGCTACTACAGCTGATGAATATTTTCCCCAAGGCC
droKik1 scf7180000300016:2210-2481 + CTAAATTGGCGAGCGAAATCGTCGCTAATTGTAGAACATGCGCTAAG-GCCAAATATGATAGACATCCC-AAGAAGCATGAGCTTGGCGAGACACCAGTCCCACCTCATGTAGGGGAAATGCTACATATAGATATTTTTTCCACGGACAAAAAGTATTTCCTTACATGCATTGACAAATTCTCGAAATTTGCCATGGTCCAACCAGTTCCATCTAGAACCATAGAGGATCTAAAACCGGCATTACTAATGCTGATGAATGTTTTCCCTAAAGCC
droFic1 scf7180000451832:6664-6935 + CCAAATTGTCGAACGAAATAGTCACTAACAGCAAGAAATGTACTAGGGGCAAAATATAACAGACATCCT-AAGAAACATAAGCTTGGAGAAGCGTCAATCCCGTCTCATGTAGGGGAAA-GCTACATAGAGATATTTTCTTCACGGATAAAAATTATTTTCTTACGTGCATCGAAAAATTTTCAAAATTTGCCATGGTTTAGCCAATACCCTCTATTATTATAGAGGATCTGAAGCCAGCCCTCTTACAACTTATGAATGTTTTCCCTAAAGCC
droEle1 scf7180000488233:34825-35096 + CCAAGTTAGCGAATGAAATTGTCACTAACTGCAAAACCTGCGCTAAA-GCAAAATATGACAGGCATCCT-AGAAAACACGAACTCGGCGAAACGCCAGTCCCGTCTCATGTGGGAGAAATGCTACACATAGACATTTTCTCCACTGATAAGAAATACTTCCTCACATGCATTGACAAATTTTCCAAATTTGCAATGGTCCAACCAATTCCCTCTAGAACCATAGAGGACCTCAAACCGGCTTTACTACAACTCCTTAACGTTTTTCCTAAAGCC
droRho1 scf7180000772872:3686-3957 + CCAAATTAGCTACCGAAATCGTAGCGAATTGCAGGACTTGCGAGAGA-GCCAAGTACGATAGGCACCCA-AAGAAACAGGAGCTCGGCGAGACACCGATCCCCTCTCATGTAGGAGAAATGTTACATATTGACATTTTCTCCACAGATAAAAAATACTTCCTTACTTGCATCGATAAGTTTTCGAAGTTTGCCGTCGTGCAACATGTCCACTCAAGGACAATTGAAGACCTCAAACCGGCTCTACTACAAATTATGAATTTCTTCCCAAGAGCT
droBia1 scf7180000301405:23158-23429 - CCAAGCTAGCGAACGAAATAGTCATTTCATGCAAGACTTGCGCCAAG-GCAAAATACGACAGGCATCCG-AAGAAACAAGAGCTTGGCGAAACCCCAATCCCATCTCAAGTAGGAGAAATGCTGCACATAGACATCTTCTCCACGGATAAAAAATATTTCCTTACATGCATCGACAAATTCTCGAAATTTGCGGTAGTCCAACCAATTCCCTCTAGGACCATAGAAGATCTCAAACCAGCATTACTACAGCTGATGAATATGTTCCCTAAGGCC
droTak1 scf7180000410464:6690-6961 + CCAAGCTAGCTAGCGAAATCGTCGCTAACTGCAAAACATGTGCTAAA-GCGAAATATGACAGGCATCCC-AAAAAGCAGGAGCTTGGGGAAACACCAATCCCGTCCCAGGTTGGGGAAATATTACACATAGACATCTTCTCAACGGATAAAAAATATTTTCTTACATCCATTGACAAATTCTCAAAATTTGCATTGGTCCAACCAATCTCCTCTAGAACCATAGAGGACATTAAACCAGCACTGCTACAACTCTTGAATGTTTTCCCGAAAGCC
droEug1 scf7180000409693:10681-10944 + CGAAGCTAGCGAACAAAATAG--------TGCAAGACTTGCGCCAAG-GCTAAACACGATAGACATCCA-AACCCACATGTTCTTGACGAAACACCAATCCCATCTCATGTAGGAGAAATGCTGCACATAGACATCTTCTCCACGGATAAAAAGTATTTCCTTACGAGCGTCGACAAATTCTTGAAATTTGCCGTTGTCCAACCAGTTACCTCTAGAACTATAGAAGATCTCAAACCAGCGCTACTACAGCTGATGAATATTTTCCCCAAGGCC
dm3 chrUextra:18800715-18800986 + CCAAGTTGGCTACCGAAATCGTAGCAAACTGCAAAACATGCGCAAAA-GCCAAATACGATAGGCACCCA-AAAAAACATGAGCTAGGCGAGACTCCAATCCCCTCTCATGTGGGAGAACTACTACACATCGACATTTTTTCTACGGATAAAAAGTATTTTCTAACTTGCATTGACAAGTTTTCGAAGTTCGCAATTGTGCAACATGTCCACTCTAGGACAATCGAAGACCTTAAACCGGCCATACTACAGATTATGAATTTCTTCCCTAGGGCT
droSim2 2r:738713-738984 - CCAAACTGGCCAATGAAATTGTCCAAAACTGCAAAACATGCGCGAAA-GCCAAATATGATAGGCATCCG-AAGAAACAAGAGATTGGCGAGTCACCGTTTCCCTCTCATATAGGAGAAATGCTACACATAGACATTTTCTCGACGGATAAAAAATATTTTCTTACTTGCATTGACAAGTTTTCGAAATTGGCCGTCGTACAGCACGTGCCGTCAAGAACAATTGAGGATTTGAAACCGGCCTTGTTACAGGTCATGAATTTCTTCCCAAAAGCC
droSec2 scaffold_301:16958-17229 - CCAAATTGGCGAGCGAAATAGCAGCCAATTGCAAAACTTGCGCCAAA-GCGAAGTATGATAGACATCCA-AGGAAACAGGAGCTCGGGGAAACTCCAATCCCGGGCCATGTATGAGAAATTTTACACATCGATATTTTCTCCACGGATAAGAAATACTTCCTCACCTGAGTGGACAATTTTTCGAAATTCGCCATGGTTCAGCCGATTCCATCTAGAACTATAGAGGATCTAAAACCACCCCTGCTACAGTTAATGAATGTTTTCCCCAAAGCC
droYak3 2R:6552847-6553118 + CCAAACTGGCCAATGAAATTGTCCAAAACTGCAAAACGTGCGCGAAA-GCTAAATATGATAGGCATCCG-AAGAAACAAGAGATTGGCGAGTCACCGATTCCCTCTCATGTAGGAGAAATGCTACACATAGACATTTTCTCAACGGATAAAAAGTATTTCCTCACTTGCATCGACAAGTTTTCGAAATTCGCCGTCGTACAGCATGTGCCGTCAAGAACAATTGAGGATTTGAAACCAGCCTTATTGCAGGTCATGAATTTCTTCCCAAAGGCC
droEre2 scaffold_4784:25377766-25378037 - CCAAATTGGCGAGCGAAATAGCAGCCAATTGCAAAACTTGCTCCAAA-GCGAAGTACGACAGGCATCCA-AAGAAACAGGAGCTCGGAGAAACTCCAGTCCCGGGCCATGTAGGAGAAATTTTACACATCGATATTTTCTCCACGGATAAGAAATACTTTCTCACCTGCGTGGACAAGTTTTCGAAATTCGCCATGGTTCAGCCGATTCCATCTAGAACCATAGAGGATCTAAAACCGCCCCTGCTACAGTTAATGAATGTTTTCCCTAAAGCC
dp5 Unknown_group_94:10616-10887 - CCAAACTAGCCAACGAGGTGGACCTAAATTGTAAGGTTTGCGCAAGG-GAAAAGTACTATAGGCACCCA-AAAAACCAAGAGCTCGGCCAAACGCCGATTCCCTCACAGGCTGGAGAGATGTTACACGTTGACATCTTCTCCAAAGACAAAAAATTCTTCCTAACCTGCGTAGACAAACTATCCAAGTTCGCAATGGTGCAACCCATTGCATCCAGGACAATAGAGGACTTACGACCCCCTCTACTGATACTAATGAACGTCTTCCCTAGGGCA
droPer2 scaffold_7280:465-737 - CCAAATTAGCAGACGAGGTTGTTGCAAATTGCAAAATTTGTCAAACG-GCCAAGTACAACCGACACCCACAAAAAACAAATACTTGGGGAAACACCCATACCCTCGTATGTGGGCGAAATGCTACATATCGACGTATATTCAACCGATAAAAAATATTTCCTCACATGCATAGACAAGCTTTCAAAATTTGCAGTTGTCCAACCCATCGCTTCAAGAACAATAGTTGACATACAATCAGCAATTTTACAACTTCTCAATTTTTACCGGAACACC
droWil2 scf2_1100000004936:249445-249708 + CAAGAATGGCCAATGAAAT-GTACGAAATTGCAAAACATGTGCTAGG-GCTAAATATGATAGACACCCC-AA-AAACAGGAGCTTGGGGAGTCACCGATCTCCTCACATGTAGGAGAGATGTTA------GACATTTTCTCCACTGACAGGAAATACTTTCTAACTTGCATCGACAAGTTCTCTAAGTTTGCTATTGTCCAACCGATCCCCTCAAGAACCATTGTGGATCTGAAGCCAGCTCTAATGCAACTAATGAATTTTTTTCCTAAGGCC
droVir3 scaffold_13050:1145203-1145468 + CCAAACTAACGAACGAAATTGTGCAAAACTGCAAAACGTGCGCTAAT-GCCATATACGATAGACAAAGT-AGAAAACAAGAGTTGGGTGAAACACCAATCCCGTCGCATGTTGGAGAGATGCTACACA------TATTCTCGACCGACAAAAAATTTTTTCTTACTTGCATCGACAAGTTTTCAAATTTCGCTGTCGTACAGCCTATCTCTTCAAGGACCATTAAGGACCTGAAGCGAGAATTTCTTCAACTCATGAACTTTTTTCCAAAAGCG
droMoj3 scaffold_6500:29904345-29904612 + CAAGAATGGCCAATGAAATAGTACAAAATTGCAGAACATGTGCTAGG-GCTAAATATGATAGACACCCC-A----ACAAGAGCTTGGAGAGACACCGATCCCCTCACATGTAGGAGAGATGTTACACATAGACATTTTCTCCACTGACAGGAAATACTTTCTAACTTGCATCGACAAGTTCTCTAAGTTTGCTATTGTCCAACCGATCCCCTCAAGAACCATTGTGGATCTGAAGCCAGCTCTAATGCAAATCATGAATTTTTTTCCTAAAACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CCAAAATGGCGAACGAAATAGTCGATTCCTGCAGGGCTTGCGCCAA---------------GACATCCA-AAGAAACAGAAGCTTGGCGAAACACCAATCCCATCTCATGTAGGAGAAATGCTACAC------ATCTTCTCCACGGATAAAAAGTATTTCCTTACGTGCATCGACAAATTCTCGAAATTTGCCGTCGTCCAACCGGC-CCCTCTAGATCCATAGAGGACCTCAAACCAGCGCTACTACAGCTGATGAACAACTTCCCTAAGGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................ACATCCA-AAGAAACAGAAGCTTGGC..........................................................................................................................................................................................2540.251100000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCCAAC.......................................................................26200.255320000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCC..........................................................................23200.204400000
.....................................................................................................................................................................................................................TAGATCCATAGAGGACCTCAAACCA....................................25200.051010000
...............................................................................................................................................................................AAATTCTCGAAATTTGCCGTCGTCC..........................................................................25200.051010000
.....ATGGCGAACGAAATAGTCG..........................................................................................................................................................................................................................................................19200.051000010
.................................................................................................................................................................................................................................GGACCTCAAACCAGCGCTACTACAGC.......................26200.051010000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGT...............................................................................18200.051100000
..................................................................................................................................................................................................................................GACCTCAAACCAGCGCTACTACAGC.......................25200.051010000
...................................................................................................................................................TAAAAAGTATTTCCTTACGTGCATCGACA..................................................................................................29200.051100000
...................................................................................................................................................TAAAAAGTATTTCCTTACGTGCATCGA....................................................................................................27200.051100000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGTCGTA...........................................................................22200.051100000
............ACGAAATAGTCGATTCCTGC..................................................................................................................................................................................................................................................20200.051100000
...........AACGAAATAGTCGATTCCTGCAGG...............................................................................................................................................................................................................................................24200.051010000
...............................................................................................................................................................................................................................GAGGACCTCAAACCAGCGCTACTACAGG.......................28200.051100000
...............................................................................................................................................................................................................................GAGGACCTCAAACCAGCGCTAC.............................22200.051010000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCCAACCG.....................................................................28200.051100000
..............................................................................................................................................................................................................................AGAGGACCTCAAACCAGCGCTACTACAGC.......................29200.051100000
..........................................................................................................................................................................................................................CCATAGAGGACCTCAAACCAGC..................................22200.051100000
.......................................................................................................................................................................................................................GATCCATAGAGGACCTCAAACCA....................................23200.051100000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGTCGTC...........................................................................22200.051010000
..............................................................................................................................................................................................................................................GCGCTACTACAGCTGATGAAC...............21200.051100000
.........................................................................................................................................................................................................................TCCATAGAGGACCTCAAACC.....................................20200.051010000
............ACGAAATAGTCGATTCCTGCA.................................................................................................................................................................................................................................................21200.051100000
...............................................................................................................................................................................................................................GAGGACCTCAAACCAGCGCTACTAC..........................25200.051010000
.................................................................................................................................................................................ATTCTCGAAATTTGCCGTCGTCCA.........................................................................24200.051001000
droBip1
CCAAGCTAGCGAACGAAATAGTCGCTTCGTGCAAGACTTGCGCGAAA-GCTAAATACGACAGACATCCA-AAGAGACATGAGCTTGGCAAAACACCAATCCCATCTCAAGTAGGAGAAATGCTGCACATAGACATCTTCTCCACGGATAAAAAGTATTTCCTTACGTGCATCGACAAATTCACGAAATTTGCCGTTGTCCAACCAGTTCCCTCTAGAACTATAGGGGATCTCAAACCAGCGCTACTACAGCTGATGAATATTTTCCCCAAGGCCSizeHit CountTotal NormTotal
No Reads
droKik1
CTAAATTGGCGAGCGAAATCGTCGCTAATTGTAGAACATGCGCTAAG-GCCAAATATGATAGACATCCC-AAGAAGCATGAGCTTGGCGAGACACCAGTCCCACCTCATGTAGGGGAAATGCTACATATAGATATTTTTTCCACGGACAAAAAGTATTTCCTTACATGCATTGACAAATTCTCGAAATTTGCCATGGTCCAACCAGTTCCATCTAGAACCATAGAGGATCTAAAACCGGCATTACTAATGCTGATGAATGTTTTCCCTAAAGCCSizeHit CountTotal NormTotal
No Reads
droFic1
CCAAATTGTCGAACGAAATAGTCACTAACAGCAAGAAATGTACTAGGGGCAAAATATAACAGACATCCT-AAGAAACATAAGCTTGGAGAAGCGTCAATCCCGTCTCATGTAGGGGAAA-GCTACATAGAGATATTTTCTTCACGGATAAAAATTATTTTCTTACGTGCATCGAAAAATTTTCAAAATTTGCCATGGTTTAGCCAATACCCTCTATTATTATAGAGGATCTGAAGCCAGCCCTCTTACAACTTATGAATGTTTTCCCTAAAGCCSizeHit CountTotal NormTotal
No Reads
droEle1
CCAAGTTAGCGAATGAAATTGTCACTAACTGCAAAACCTGCGCTAAA-GCAAAATATGACAGGCATCCT-AGAAAACACGAACTCGGCGAAACGCCAGTCCCGTCTCATGTGGGAGAAATGCTACACATAGACATTTTCTCCACTGATAAGAAATACTTCCTCACATGCATTGACAAATTTTCCAAATTTGCAATGGTCCAACCAATTCCCTCTAGAACCATAGAGGACCTCAAACCGGCTTTACTACAACTCCTTAACGTTTTTCCTAAAGCCSizeHit CountTotal NormTotal
No Reads
droRho1
CCAAATTAGCTACCGAAATCGTAGCGAATTGCAGGACTTGCGAGAGA-GCCAAGTACGATAGGCACCCA-AAGAAACAGGAGCTCGGCGAGACACCGATCCCCTCTCATGTAGGAGAAATGTTACATATTGACATTTTCTCCACAGATAAAAAATACTTCCTTACTTGCATCGATAAGTTTTCGAAGTTTGCCGTCGTGCAACATGTCCACTCAAGGACAATTGAAGACCTCAAACCGGCTCTACTACAAATTATGAATTTCTTCCCAAGAGCTSizeHit CountTotal NormTotal
No Reads
droBia1
CCAAGCTAGCGAACGAAATAGTCATTTCATGCAAGACTTGCGCCAAG-GCAAAATACGACAGGCATCCG-AAGAAACAAGAGCTTGGCGAAACCCCAATCCCATCTCAAGTAGGAGAAATGCTGCACATAGACATCTTCTCCACGGATAAAAAATATTTCCTTACATGCATCGACAAATTCTCGAAATTTGCGGTAGTCCAACCAATTCCCTCTAGGACCATAGAAGATCTCAAACCAGCATTACTACAGCTGATGAATATGTTCCCTAAGGCCSizeHit CountTotal NormTotal
No Reads
droTak1
CCAAGCTAGCTAGCGAAATCGTCGCTAACTGCAAAACATGTGCTAAA-GCGAAATATGACAGGCATCCC-AAAAAGCAGGAGCTTGGGGAAACACCAATCCCGTCCCAGGTTGGGGAAATATTACACATAGACATCTTCTCAACGGATAAAAAATATTTTCTTACATCCATTGACAAATTCTCAAAATTTGCATTGGTCCAACCAATCTCCTCTAGAACCATAGAGGACATTAAACCAGCACTGCTACAACTCTTGAATGTTTTCCCGAAAGCCSizeHit CountTotal NormTotal
No Reads
droEug1
CGAAGCTAGCGAACAAAATAG--------TGCAAGACTTGCGCCAAG-GCTAAACACGATAGACATCCA-AACCCACATGTTCTTGACGAAACACCAATCCCATCTCATGTAGGAGAAATGCTGCACATAGACATCTTCTCCACGGATAAAAAGTATTTCCTTACGAGCGTCGACAAATTCTTGAAATTTGCCGTTGTCCAACCAGTTACCTCTAGAACTATAGAAGATCTCAAACCAGCGCTACTACAGCTGATGAATATTTTCCCCAAGGCCSizeHit CountTotal NormTotal
No Reads
dm3
CCAAGTTGGCTACCGAAATCGTAGCAAACTGCAAAACATGCGCAAAA-GCCAAATACGATAGGCACCCA-AAAAAACATGAGCTAGGCGAGACTCCAATCCCCTCTCATGTGGGAGAACTACTACACATCGACATTTTTTCTACGGATAAAAAGTATTTTCTAACTTGCATTGACAAGTTTTCGAAGTTCGCAATTGTGCAACATGTCCACTCTAGGACAATCGAAGACCTTAAACCGGCCATACTACAGATTATGAATTTCTTCCCTAGGGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................CAGATTATGAATTTCTTCCCTAGGGC.268245.131961000000000000000000000022000000000000208010811010130105083000125900000000000000000000000000000000000010000000000000000000000000000000002061301051432640813118113201414000000000000000000000000000000001111024060000000020000000009301424032573193190419900000000000000000000100000000000000000000000000000000000000000000515420000001343000000000000000441000000
..........................................................................................................................................................................TTGACAAGTTTTCGAAGTTCG...................................................................................2119206.32392000000000000000000000000000000000000002000004000403151000003000000000000000000000000000000000000000000000000000000000000000001000000000000000000009289140125086000000000000000000020000000000000000300000000000140201000001600110029181000000000000000000000000000000000000000000023922584010300000000000000012158584080000460000001600010000000000000
.............................................................................................................................................................................................................................................................ATGAATTTCTTCCCTAGGGCT218157.8812630000000000000000000000000000000001001200000001132147400000000000000000000000021020000000000000000000000000000000000000000000000000000000000000000421912012500600000000000000000000000000000000100220000000000004000000000122015281623119256919000000000000000100000000000000000000000000005333200108300001000000001010416021507000001000000004001000000003200000
........................................................................................................................................TTTTCTACGGATAAAAAGTAT.....................................................................................................................2114139.211949000000000000000000000002000010000100163733502700223212361017115000000000000000000000005526000000000000000000000000000000000000000000000000000100000000001029129408017552211626000000000000000010000100000000000211470000112000013180332000001224011110207230390000000000000001000000000000000000000000000011231203501520000100000000006793426108000015010000013001000000006300000
.........................................................................................................................................TTTCTACGGATAAAAAGTATT....................................................................................................................2114138.861944000000000000000000000002000000000000441360340010153163105200000000000000000000000760200000000000000000000000000000000000000000001000000000000000000009191130822806100000000000000000000000000000000001001800002200000230011000002130690301813081000000000000000000000000010000000000000000002243656134919300000000000001086104611080200003300000002001000000014600000
...........................................................................................................ATGTGGGAGAACTACTACACA..................................................................................................................................................2110129.5012950000000000000000000000000010000000000100000000010000000000000000000000000000032000000000000000000000000000000000000000000000000000000000000000000040400100000000000000000000000000000000000000000000000000001000000000300000000001000000000000000000000000000000000000000000006836710116500000000000000014441575240100000000000010000000000002000000
...............................................................................................................................................................................AAGTTTTCGAAGTTCGCAATT..............................................................................2119118.26224700000000000000000000000000000000000002000020001031141000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167140128034000000000000000000010000000000000000310000000000150192000001810500000100000000000000000000000000000000000000010000011941285110700000000000001012141467010000150010000500000000000000000
..................................................................................................................................................................................TTTTCGAAGTTCGCAATTGTG...........................................................................2119107.21203700000000000000000000000100000000000028013037002210141312112000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000020502838026219800000000000000000001000000000000000010000000000022020000000320040100805500000000000000000000000000000000000001000011306910021700000000000000002164291070000030000000200010000000000000
............................................................................................................................................................................................................................................................TATGAATTTCTTCCCTAGGGC.21893.257460000000000000000000000000000000000000674401010019156143070000001000000000000000002330000000000000000000000000000000000000000000000000061000000010000082242651890611000000000000000000010000000000000122110000000000002000100000254093911714629571600000000000100020000000000000000000001100000644007510000300000000211013102000000022001000014000000000004100100
...................................................................................................................................................................................TTTCGAAGTTCGCAATTGTGC..........................................................................211972.58137900000000000000000000000300000000000020361111012510016221531554919200000000000000000000000100000000000000000000000000000000000000000000000000006520000005100015212854960672601529000000000000000000000000000000000000260000030000026300200000109501280116221290100000000000000000000003000001010000200000025800000000010000000000003450031000013800200022600310000000000000
....................................................................................................................................................................................TTCGAAGTTCGCAATTGTGCA.........................................................................211969.321317000000000000000000000000000000000000010000110010012330000000000000000000000000000000000000000000000000000000200000000000000100000010000000000100011039110101500000000000000000000000000000000000040000000000002000000000111021100709300000000000000000000000000000010000000000001125666010300000000000000020139274020000010000000100100000000000000
......................................................................................................................................TTTTTTCTACGGATAAAAAGT.......................................................................................................................211467.0093800000000000000000000000000000000000016112039004951914169200000000000000000000000523200000000000000000000000000000000000000000000000000101000000100002159234672803630000000000000000000100000000000011144000001230000048021250000088512410200002000000000000000000000000000000000000000000004513510619000010000000000101539780500000410000005000100000003500000
.......................................................................................................................................................................................................................GGACAATCGAAGACCTTAAAC......................................211966.371261000000000000000000000000000000000000000000000000000000000000000000000000000000231000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000835340011560000000000000009471113780100001100000000000000000001900000
................................................................................................................................................................................AGTTTTCGAAGTTCGCAATTG.............................................................................211964.42122400000000000000000000000000000000000100000001000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503031004000000000000000000000000000000000000000000000000000110000007101200012210000000000000000000000000000000000000000000212472101000000000000000001169259020000040000000100000000000000000
.................................................................................................................................................................................................................ACTCTAGGACAATCGAAGAC.............................................201861.2811030000000000000000000000000000000000000000000000010000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000005310311264300000000000000074197522000000000000000000000000000600000
.................................................................................................................................................................................................................ACTCTAGGACAATCGAAGACC............................................211860.83109500000000000000000000000000000000000011000001000100020000001000000000000000000010100000000000000000000000000000000000000000000000000000000000000001013000000000000000000000000000000020000000001400000200000000000000001004001220000000000000000000000000000000000000000100000049271003826300000000000000030103542060200000200000005000000000003800000
..AAGTTGGCTACCGAAATCGTA...........................................................................................................................................................................................................................................................211660.7597200000000000000000000000000000000000020000000000200021000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000022001001000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000099556001510100000000000000044227104010000000000000000000000000700000
.........................................................................................................................................................................................................................ACAATCGAAGACCTTAAACCG....................................211958.16110500000000000000000000000000000000000000010010000101040200000100000000000000000921700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000030000000003010002000000000000000000000000000000000000000000000000059407002822800000000000000033108391280100000000000008000000000002400000
................................................................................................................................TCGACATTTTTTCTACGGATA.............................................................................................................................211458.07813000000000000000000000000000000000020010000120002031211000702000000000000000003537202700000000000000000000000000000000000000000000010000000000000000001422041018000000000000000000000001000000000110600000000000000000000000000151522431322240000000000000000000000000000000000000100000037242011397000000000000000624724010000000000000200000000000900000
..............................................................................................................TGGGAGAACTACTACACATCG...............................................................................................................................................211157.276300000000000000000000000000000000000001001010000010031000000000000000000000000003410000000100010000000006000000110000000000000000000000000000000000021101101100000000000000000000000000000000000000000000000001000000000000112164811120000000000000000000000000000000000000100000234164003115800000000000000018322676020000000000000100000000000400000
....................................................AATACGATAGGCACCCA-AAAA........................................................................................................................................................................................................211757.1897200000000000000000000000000000000000011110022003220321000000000000000000000000131700000000000000000000000000000000000000000000000000000000000000000196713206300000000000000000000000000000000030120000000000001000000000161041201592621820000000000010000000000000000000000000100001298560004200000000000000000310470100005800000000000000000001900000
...........................................................................................................................................................................................................................................................TTATGAATTTCTTCCCTAGGG..21853.38427000000000000000000000000000000000000020020270002133250100000000000000000000000102100000000000000000000000000000000000000000000000000000000000000002423031051000000000000000000000000000000000000000000000000001000000000122011264102282712000000000000000000000000000000000000000000001948001952000000000000000183710150000000000000000000000000001000000
.......................................................................................................................................TTTTTCTACGGATAAAAAGT.......................................................................................................................201451.9372700000000000000000000000000000000000002201005001312330000000000000000000000000202000000000000000000000000000000000000000000000000000100000000000002328491016000000000000000000000000000000000212100101700001220010000001510700310000000000000000000000000000000000000000000000013612020191130000000000000007610243600800002200000001000000000003000000
..........................................................................................................................................TTCTACGGATAAAAAGTATTT...................................................................................................................211451.6472300000000000000000000000000000000000001000010101120125000000000000000000000000511000000000000000000000000000000000000000000000000000000000000000001517061071000000000000000000000000000000000000400000200000030000000000001002110130000000000000000000000000000000000000000000091239003910400000000000000046493642020000000000000100000000000500000
..........TACCGAAATCGTAGCAAACTG...................................................................................................................................................................................................................................................211749.538420000000000000000000000000000000000000100001000001111000000600000000000000000012010000000000000000000000000000000000000000000000000000000000000000161101200200000000000000000000000000000000000000000000000000000000000100120111020000000000000000000000000000000000000000000018327501321170000000000000002758591320100000000000001000000000001600000
..............................................................................................................................................................................CAAGTTTTCGAAGTTCGCAAT...............................................................................211948.119140000000000000000000000000000000000001000000000010401100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000488140172093000000000000000000000000000000000000000000000000010202000005001000000000000000000000000000000000000000000000000000011749300030000000000000000160148030000030010000000000000000000000
.............................................................................................................................................................................ACAAGTTTTCGAAGTTCGCAA................................................................................211945.5886600000000000000000000000000000000000011000013000201011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341125011110130000000000000000000000000000000000000800000000000240010000001200000010000000000000000000000000000000000000000100000038287000100001000000000010862900300002500000001000020000000000000
.....................................................................................................................................................................................TCGAAGTTCGCAATTGTGCAA........................................................................211944.848520000000000000000000000000000000000005501102100114697400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516101201140870000000000000000000000000000000000001604000000000311026100000113712800007012000000000000000000000000000000000000030000005030700000000000000000002033127000000300400000000010000000000000
...........................................................................................................................................................................................TTCGCAATTGTGCAACATGTC..................................................................211842.507650000000000000000000001000000000000000100000200001046000000100000000000000000010000000000000000000000000000000000000000000000000000130000000000003140300201100000000000000000000000000000000000000000000000000000000000600001109125000000000000000000000000000000000000010000011175420001000000000000000011128000000110000000000000000000000000
....................................................................................................................................................................................................................................................CTACAGATTATGAATTTCTTC.........21840.25322000000000000000000000000000000000000241010530043038112200000000000000000000000513200000000000000000000000000000000000000000000000000100000000000006101120105051800000000000000000000000000000000020112000000000000203000000045003301140560000000000000000000000000000000001000110000061900719000000000000000211770300001200100005001000000001200000
................................................................................................................................................................................AGTTTTCGAAGTTCGCAATTGTGC..........................................................................241940.1676300000000000000000000020130000000000003010127206050232001200010000000000000000000000000000000000000000000000000000000000000000000000006000401003210304131619112307970000000000000000000000000000000000100100900310400000380000000001201377618041324401000000000000000000000000000000000000000000000000000000000002001002260310000092125000000000000002512000000
.........................................................................................................TCATGTGGGAGAACTACTACA....................................................................................................................................................211039.70397000000000000000000000000000000000000000000000001000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000011022120000000000000000000000100000000000000002000000000000000000000001000000000000000000000000000000000000000000000000000000321110094100000000000000052151930000000000000000000000000001800000
...........ACCGAAATCGTAGCAAACTGC..................................................................................................................................................................................................................................................211739.00663000000000000000000000001000000000000100000020001010301000000000000000000000005210000000000000000000000000000000000000000000000000001000100010000004221300020000000000000000000100000000000010000000000000000100000000011001241631821260000000000000001000000000000000000000000000034161011712000000000000000016761991010000010000000200000000100900000
...............................................................................................................................ATCGACATTTTTTCTACGGAT..............................................................................................................................211434.644850000000000000000000000000000000000001000000000000100200000000000000000000000025191932000000000000000000000000000000000000000000000000001000000000000003000230000000000000000000000000000000000001000000000000000000000000020003208341531221500000000000000000000000000000000000000000000846008470000000000000005615000000000000000000000000000100000
........................................................................................................................................................................................................................GACAATCGAAGACCTTAAACC.....................................211934.1664900000000000000000000000000000000000000000012000000020000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001127244002518000000000000000014712149010000000000000200000000000200000
........................................................................................................................................TTTTCTACGGATAAAAAGTATT....................................................................................................................221433.294660000000000000000000000000000000000001401000100104245300000000000000000000000011030000000000000000000000000000000000000000000000000000000000000000343711004000000000000000000000000000000000100030000000000053020000000800411104612300000000000100000000000000000000000000000000651650083500001000000000013122327000000000000000100000000000700000
...........................................................................................................................................TCTACGGATAAAAAGTATTTT..................................................................................................................211432.794590000000000000000000000000000000000000210100000110032000000000000000000000000005260000000000000000000000000000000000000000000000000010000000000000131301000100000000000000000000000000000000000120000050000000000000000310030143601100000000000000000000000000000000000000000000361800197000000000000000010371227000000000000000000100000000100000
...........................................................................................................................................................................TGACAAGTTTTCGAAGTTCGC..................................................................................211932.216120000000000000000000000000000000000000100100200011211100000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000143306004100000000000000000000000000000000000000000000000000004000000410000001000000000000000000000000000000000000000110000004727500000000100000000000176149110000080100000100000000000000000
..........................................................ATAGGCACCCA-AAAAAACATG..................................................................................................................................................................................................211632.195150000000000000000000000000000000000000100000001113030000000000000000000000000032010000000000000000000000000000000000000000000000000000000000100000143221003000000000000010000000000000000000000060000010000000000000000201212016159118200000000000000000000000000000000000000000000151560030149000000000000000823110000000110000000000000000000200000
....................................................AATACGATAGGCACCCA-AAA.........................................................................................................................................................................................................201830.565500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000002597014631900000000000000094605000000000000000000000000000100000
.....................................................................................................................................................................................................................................................TACAGATTATGAATTTCTTCC........21830.3824300000000000000000000000000000000000001000010000000010000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000001020001000000000000000000000000000000000000000000000000000000000000001001100110000000000000000000000000000000000000000000124107006300000000000000001420619000000000000000100000000000100000
...........................................................................................................................................................................................................................AATCGAAGACCTTAAACCGGC..................................211930.055710000000000000000000000010000000000001111101400210241200000100000000000000000026321029000000000000000000000000000000000000000000000000002000000020000016000130220000000000000000000100000000000006109000000001002402113000010111027034235952111000000000000000000000000000000000000010100003230045300000000000000017481228010000040000000100000000000200000
...................................................AAATACGATAGGCACCCA-AAA.........................................................................................................................................................................................................211829.565320000000000000000000000000000000000000000000000001001000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000010000006000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000016538600212000000000000000231332010000000000000000000000000200000
.............................................................................................................................................TACGGATAAAAAGTATTTTCT................................................................................................................211829.22526000000000000000000000000000000000000101140120002352230000000000000000000000002318141000000000000000000000000000000000000000000000000000000000000000001134611068000000000000000000000000000000000201500001020000000001000002001311410204200000000000000000000000000000000000000000000156100309900001000000000040761017010000020000000000000000000000000
............................................................................................................................................................................................................................ATCGAAGACCTTAAACCGGCC.................................211928.685450000000000000000000000000000000000000100000100001000000001000000000000000000039341631000000000000000000000000000000000000000000000000033000000060000001000000300000000000000000000000000000000000002000000000002000000000040011807518430122700000000000000000000000000000000000001000000740009660000100000000004301029010000110000000100000000000200000
..............................................................................................................................................................................CAAGTTTTCGAAGTTCGCAA................................................................................201928.325380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000400000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000004531100000000000000000000045128000000000000000000000000000000000
.........................................................................................................................................................................ATTGACAAGTTTTCGAAGTTC....................................................................................211927.21517000000000000000000000000000000000000010000020000020100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000020000000000000000000000000000000000000000000000000000000000030000002005200000000000000000000000000000000000000000000733660000000010000000000001439000000030000000000000000000000000
.......................................................................................................................................................................................................................................................CAGATTATGAATTTCTTCCCT......21826.632130000000000000000000000000000000000000000000000000110000000000000000000000000002000000000000000000000000000000000000000000000000000000000100000000001100000100000000000000000000000000000000000000000000000000000000000000032218166873714000000000000000000000000000000000000000000000400130000000000000000300000000000000000000000000000000000
..........................................................................................................CATGTGGGAGAACTACTACAC...................................................................................................................................................211026.102610000000000000000000000000000000000000000000000010010000001300000000000000000023210000000000000000000000000000000000000000000000000000000000000000021121000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000005310031500001000000000072532970200001100000003000000000001600000
.....................TAGCAAACTGCAAAACATGCG........................................................................................................................................................................................................................................211726.0044200000000000000000000000000000000000012001004000002320000011000000000000000000226100000000000000000000000000000000000000000000000000000000000000002324100000000000000000000000000000000000000101200000000000000000000009102011220230000000000000000000000000000000000000000000036195002660000000000000001328722000000000000000100000000000500000
.CAAGTTGGCTACCGAAATCGT............................................................................................................................................................................................................................................................211625.5040800000000000000000000000100000000000004101003010722372100010000000000000000000122500000000000000000000000000000000000000000000000000300000000010008157112910020000000000000000000000000000000002011400101000000520160000007101510412221000000000000000000000000000000000000000000008230071600000000000000024241070600001200000018000100000002400000
..........................................................................................................................................................................................................................CAATCGAAGACCTTAAACCGG...................................211925.214790000000000000000000000000000000000000310000400201203000001000000000000000000032432429000000000000000000000000000000000000000000000000010001000020000001012010020000000000000000000000000000000002201300100000000000000000004003151421933121900000000000100000000000000000000000001000000311007250000100000000002229440500000400000002000000000002000000
.....................................................ATACGATAGGCACCCA-AAAA........................................................................................................................................................................................................201723.5940100000000000000000000000000000000000000000000000000000100001000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003110100000000000000000000000000000000000000000000013740031222000000000000000113513000000000000000000000000000100000
..............................................................................................................................CATCGACATTTTTTCTACGGA...............................................................................................................................211423.003220000000000000000000000000000000000000000002000020202100000000000000000000000026291529000000000000000000000000000000000000000000000000000000000000000002020100010000000000000000000000000000000001013000000000000100000000001003020981980000000000010000000000000000000000000000000042500115800000000000000092327000000000000000000000000000300000
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........................................................................................................................................................................................................................GACAATCGAAGACCTTAAA.......................................19193.4265000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104000170000000000000001113000000000000000000000000000000000
.....................TAGCAAACTGCAAAACATGCGC.......................................................................................................................................................................................................................................22173.415800000000000000000000000000000000000000000000000000100000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100220110000000000000000000000000000000000000000002022300160000000000000001315000000000000000000000000000000000
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..................................................................................................................................................................................................................................................TACTACAGATTATGAATTTCT...........2183.38270000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000030000010000000000000000000000521013000000000000000000000000000000000000000000000200010000000000000000001000000000000000000000000000000000
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...................................................................................................................GAACTACTACACATCGACATT..........................................................................................................................................21123.334000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010000000000000000000000000000000000000000000001101480000000000000003037000000000000000000000000000000000
............................................................................................................TGTGGGAGAACTACTACACATC................................................................................................................................................22103.30330000000000000000000000000000000000000000000100000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001101100000000000000000000000000000000000000020000000000000000000000100000000000000000000000000000000000000000000000000000010600270000000000000000115000000000000000000000000000000000
.......................................................................................................................................TTTTTCTACGGATAAAAAGTAT.....................................................................................................................22143.294600000000000000000000000000000000000001000000000303000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100010021000000000000000000000000000000000000100000000000010000000001000000100000000000000000000000000000000000000000000000021200140000000000000002322000000000000000000000000000100000
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.................................................................................................................................................................................................................ACTCTAGGACAATCGAAGACCT...........................................22183.17570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002110001100000000000000067413000000000000000000000000000200000
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...........................................................................................................................................................................................................................AATCGAAGACCTTAAACCGG...................................20193.1660000000000000000000000000000000000000010000000000000100000000000000000000000001211000000000000000000000000000000000000000000000000000000000000000001000000030000000000000000000000000000000000000000000000000000000000000011022101000000000000000000000000000000000000000000000312001800000000000000006010000000000000000000000000000100000
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..................TCGTAGCAAACTGCAAAACATGCGC.......................................................................................................................................................................................................................................25172.12360000000000000000000000000000000000000000000000000000000005320000000000000000000000000210000000000000000000000000010000000000000000000103000110000000010100000000000000000000000000000000000000000000002000130001000000200110200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
droSim2
CCAAACTGGCCAATGAAATTGTCCAAAACTGCAAAACATGCGCGAAA-GCCAAATATGATAGGCATCCG-AAGAAACAAGAGATTGGCGAGTCACCGTTTCCCTCTCATATAGGAGAAATGCTACACATAGACATTTTCTCGACGGATAAAAAATATTTTCTTACTTGCATTGACAAGTTTTCGAAATTGGCCGTCGTACAGCACGTGCCGTCAAGAACAATTGAGGATTTGAAACCGGCCTTGTTACAGGTCATGAATTTCTTCCCAAAAGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................ATAGACATTTTCTCGACGGATAAA...........................................................................................................................24383.6725102440120616537232050000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAA..........................................................................................................................25368.332050023000535135384010000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAAA........................................................................................................................27364.00192025940033631768000000
.............................TGCAAAACATGCGCGAAA-GCCAAATA..........................................................................................................................................................................................................................26252.501050007808000010000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAA.........................................................................................................................26343.67131011400023591994020000
........................................................................................................................GCTACACATAGACATTTTCTCGACGGA...............................................................................................................................27329.33880000006033100192000
...............................................................................................................................ATAGACATTTTCTCGACGGATA.............................................................................................................................22320.3361001400012111074030000
...............................................................................................................................ATAGACATTTTCTCGACGGATAA............................................................................................................................23318.00540090001117640070000
........................................................................................................................GCTACACATAGACATTTTCTCGACGG................................................................................................................................26317.00510000003313000113000
....................................................................................................................................................................................TTCGAAATTGGCCGTCGTACAGCACG....................................................................26116.001600400037020000000
.............................TGCAAAACATGCGCGAAA-GCCAAA............................................................................................................................................................................................................................24213.5027000124000002000000
......................................................TATGATAGGCATCCG-AAGAAACAAGAGA...............................................................................................................................................................................................28813.00104000000124232151020000
..............................................................................................................................................................................................................TGCCGTCAAGAACAATTGAGGATTTGA.........................................27612.1773002000101182319000000
.............................TGCAAAACATGCGCGAAA-GCC...............................................................................................................................................................................................................................21411.00440000261300005000000
.........................AAACTGCAAAACATGCGCGAAA-GCCA..............................................................................................................................................................................................................................26410.75430001130000027200000
.........................AAACTGCAAAACATGCGCGAAA-GCCAAA............................................................................................................................................................................................................................28210.5021000300000018000000
.............................TGCAAAACATGCGCGAAA-GCCA..............................................................................................................................................................................................................................22410.0040000039000001000000
......................................................TATGATAGGCATCCG-AAGAAACAAGA.................................................................................................................................................................................................2688.887100000013299173000000
..............................................................................................................................................................................................................TGCCGTCAAGAACAATTGAGGATT............................................2468.50510000003931022040000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTA...........................2348.5034000000000000331000
.........................................................................AAACAAGAGATTGGCGAGTCACCG.................................................................................................................................................................................2488.13650141114700000100000
.....................................................................................................................................................................................TCGAAATTGGCCGTCGTACAGCACG....................................................................2518.00800300002012000000
........................................................TGATAGGCATCCG-AAGAAACAAGAGA...............................................................................................................................................................................................2687.886300100042312715010000
................................................................................................................................TAGACATTTTCTCGACGGATA.............................................................................................................................2137.6723019012000001000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAATT..........................................................................................................................2537.672300000095720000000
.......................................................................................................................TGCTACACATAGACATTTTCTCGACGGA...............................................................................................................................2837.3322000500212111000000
............................................................................................................................CACATAGACATTTTCTCGACGGATA.............................................................................................................................2537.3322011800000300000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAAAA.......................................................................................................................2837.0021001000107210000000
.............TGAAATTGTCCAAAACTGCAAAACA............................................................................................................................................................................................................................................2526.501300040014310000000
...........................................................TAGGCATCCG-AAGAAACAAGAGATT.............................................................................................................................................................................................2575.864100000013103510000000
..........................AACTGCAAAACATGCGCGAAA-GCCAAA............................................................................................................................................................................................................................2725.501100000031133000000
.........................AAACTGCAAAACATGCGCGAAA-GCCAA.............................................................................................................................................................................................................................2745.5022000100000021000000
..........CAATGAAATTGTCCAAAACTGCAAAACA............................................................................................................................................................................................................................................2825.501100030022040000000
...............................................................................................................................ATAGACATTTTCTCGACGGA...............................................................................................................................2035.3316000012010003000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTT............................2245.2521000000000000210000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAAAT.......................................................................................................................2835.001500010095000000000
............................................................................CAAGAGATTGGCGAGTCACCGTT...............................................................................................................................................................................2315.00500100000004000000
............................CTGCAAAACATGCGCGAAA-GCCAAA............................................................................................................................................................................................................................2524.50900000800001000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTAC..........................2444.5018000000000000153000
............................................................................................................................CACATAGACATTTTCTCGACGGATAAA...........................................................................................................................2734.3313011110000000000000
..................................................................................................TTCCCTCTCATATAGGAGA.............................................................................................................................................................1934.3313000013000000000000
...............................................................................................................................ATAGACATTTTCTCGACGGAT..............................................................................................................................2134.331300200042301001000
............................................................................CAAGAGATTGGCGAGTCACCGTTT..............................................................................................................................................................................2414.00400000000004000000
................................................................................................................................................................................AGTTTTCGAAATTGGCCGTCGTA...........................................................................2314.00400000003010000000
.............TGAAATTGTCCAAAACTGCAAAACATG..........................................................................................................................................................................................................................................2714.00400000010030000000
.............................TGCAAAACATGCGCGAAA-GC................................................................................................................................................................................................................................20104.0040000036000004000000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAACCG....................................2764.0024000614000004000000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTACA.........................2163.8323000016001111012000
.............................TGCAAAACATGCGCGAAA-GCCAA.............................................................................................................................................................................................................................2343.7515000013000002000000
.......................................................................................................................TGCTACACATAGACATTTTCTCG....................................................................................................................................2333.6711000011000000000000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAAC......................................2563.6722000614000002000000
............................................................................................................................CACATAGACATTTTCTCGACGGATAA............................................................................................................................2633.6711001100000000000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTACA.........................2543.5014000000000000140000
......................................TGCGCGAAA-GCCAAATATGATAGGCG.................................................................................................................................................................................................................2623.50700000000007000000
............................................................................................................................CACATAGACATTTTCTCGACGG................................................................................................................................2233.3310000001000000000000
..........................AACTGCAAAACATGCGCGAAA-GCCAA.............................................................................................................................................................................................................................2643.251300000011222050000
.........................AAACTGCAAAACATGCGCGAAA-GCC...............................................................................................................................................................................................................................2543.2513000200000011000000
............................CTGCAAAACATGCGCGAAA-GCC...............................................................................................................................................................................................................................2243.2513000013000000000000
.....................................................................................................................................................................................................................AAGAACAATTGAGGATTTGAAACCGGC..................................2763.1719000000114001021000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAT.........................................................................................................................2633.00900000023310000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAT..........................................................................................................................2533.00900000033200010000
.......................................................ATGATAGGCATCCG-AAGAAACAAGA.................................................................................................................................................................................................2583.0024000000150900000000
........................................................TGATAGGCATCCG-AAGAAACAAGAGAT..............................................................................................................................................................................................2783.0024000200252112000000
..........................................................................................................................TACACATAGACATTTTCTCGACGGA...............................................................................................................................2533.00900110005001010000
....................................................................................................................................................................................TTCGAAATTGGCCGTCGTACAGCAC.....................................................................2513.00300000001000020000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAACCGG...................................2862.8317000160000001000000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTACAGGT......................2462.831700410002019000000
.................................................................................................................................................................................................................................................TTGTTACAGGTCATGAATTTCTTCCCA......2742.751100340001201000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTACAG........................2642.751100000000000074000
..........................AACTGCAAAACATGCGCGAAA-GCCA..............................................................................................................................................................................................................................2542.751100000016010030000
.................................................................................................................................................................................................................................................TTGTTACAGGTCATGAATTTCTTCCC.......2642.7511001010000000000000
...................................................................................................................................................................................................................................ATTTGAAACCGGCCTTGTTACA.........................2262.6716000016000000000000
................................................................................................................................TAGACATTTTCTCGACGGATAAAAAA........................................................................................................................2632.67800400011011000000
........................................................................................................................GCTACACATAGACATTTTCTCGACG.................................................................................................................................2532.67800000010100051000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAATT.........................................................................................................................2632.67800000042200000000
.....................................................................................................................................................................................................................................................TACAGGTCATGAATTTCTTCCCAAA....2542.501000300041200000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCGGCCTTGTTACAGG.......................2842.501000000064000000000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAACCGGC..................................2962.5015000130011000000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTACG.........................2542.5010000000000000100000
.........................................................................AAACAAGAGATTGGCGAGT......................................................................................................................................................................................19112.4527000027000000000000
...................TGTCCAAAACTGCAAAACATGCGC.......................................................................................................................................................................................................................................2462.3314000001400000000000
.................................................................................................................................................................................................................CGTCAAGAACAATTGAGGATT............................................2172.2916000015000001000000
.........................AAACTGCAAAACATGCGCGAAA-..................................................................................................................................................................................................................................2272.2916000016000000000000
.....................................................................................................................................................................................................................AAGAACAATTGAGGATTTGAAACCGGCC.................................2862.171300000002120053000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATT............................................1972.1415000015000000000000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAA.......................................2472.141500310000029000000
..........................AACTGCAAAACATGCGCGAAA-GCCAAAA...........................................................................................................................................................................................................................2822.00400000000120010000
....................................................................................................................................................................................TTCGAAATTGGCCGTCGTACAGCA......................................................................2412.00200000001000010000
....................................................................................................................................................................................TTCGAAATTGGCCGTCGTACAGC.......................................................................2312.00200000002000000000
..................................................................................ATTGGCGAGTCACCGTT...............................................................................................................................................................................1712.00200000000002000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTATTT........................2642.00800000000000080000
.........................................................................AAACAAGAGATTGGCGAGTCACCGTT...............................................................................................................................................................................2612.00200020000000000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCGGCCTTGTTA...........................2442.00800000000200060000
.................................................................................................................................................................................................................................................TTGTTACAGGTCATGAATTTCTT..........2352.001000020000215000000
...................................................................................TTGGCGAGTCACCGTTTCCCTCTCATA....................................................................................................................................................................2712.00200000001001000000
.....................................................................................................................................................................................TCGAAATTGGCCGTCGTACAGC.......................................................................2212.00200200000000000000
..............................GCAAAACATGCGCGAAA-GCCAAA............................................................................................................................................................................................................................2322.00400000000004000000
................................................................................................................................................................................................................CCGTCAAGAACAATTGAGGAT.............................................2192.0018000018000000000000
.............................TGCAAAACATGCGCGAAA-..................................................................................................................................................................................................................................18101.9019000018000001000000
...........................................................TAGGCATCCG-AAGAAACAAGAGATTGG...........................................................................................................................................................................................2771.711200030020212020000
.........................AAACTGCAAAACATGCGCGAAA-GC................................................................................................................................................................................................................................2471.7112000200000010000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAT...........................................................................................................................2431.67500000030110000000
................................................................................................................................TAGACATTTTCTCGACGGATAAA...........................................................................................................................2331.67500500000000000000
.................................................................................................................................................................................................................................................TTGTTACAGGTCATGAATTTCTTCCCAAA....2931.67500110020010000000
........................................................................................................................GCTACACATAGACATTTTCTCGAC..................................................................................................................................2431.67500000010100030000
........................................................TGATAGGCATCCG-AAGAAACAAGAG................................................................................................................................................................................................2581.631300000002245000000
........................................................................................................................GCTACACATAGACATTTTCT......................................................................................................................................20101.6016000001600000000000
....................................................................G-AAGAAACAAGAGATTGGCGAGTCA....................................................................................................................................................................................2551.60800000000000080000
.......................................................................................................................TGCTACACATAGACATTT.........................................................................................................................................18101.6016000016000000000000
...........AATGAAATTGTCCAAAACTGCAAAACA............................................................................................................................................................................................................................................2721.50300010010010000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGT.............................2141.50600000000000042000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTAT..........................2441.50600000000000060000
......................................TGCGCGAAA-GCCAAATATG........................................................................................................................................................................................................................1921.50300000000003000000
..........CAATGAAATTGTCCAAAACTGC..................................................................................................................................................................................................................................................22101.5015000015000000000000
.............................TGCAAAACATGCGCGAAA-GCCAAAT...........................................................................................................................................................................................................................2521.50300000000003000000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTACAGGTC.....................2561.50900500000013000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCGGCCTTGTTAC..........................2541.50600000032010000000
........................................................TGATAGGCATCCG-AAGAAACAAGA.................................................................................................................................................................................................2481.381100000006023000000
..........................................................................................................................TACACATAGACATTTTCTCGACGGATA.............................................................................................................................2731.33400400000000000000
................................................................................................................................TAGACATTTTCTCGACGGATAAAAA.........................................................................................................................2531.33400400000000000000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTAC..........................2061.33800200002004000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAACTT.........................................................................................................................2631.33400000020200000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAC...........................................................................................................................2431.33400000002000020000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAACT.........................................................................................................................2631.33400000012010000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAATTT.........................................................................................................................2631.33400000022000000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAACT..........................................................................................................................2531.33400000020020000000
......................................................TATGATAGGCATCCG-AAGAAACAAGAGAA..............................................................................................................................................................................................2981.251000000005200003000
.......................................................ATGATAGGCATCCG-AAGAAACAAGAGA...............................................................................................................................................................................................2781.251000000040600000000
...........................................................TAGGCATCCG-AAGAAACAAGAGATTGGC..........................................................................................................................................................................................2851.20600000024000000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGAGT......................................................................................................................................................................................2651.20600000013110000000
...................TGTCCAAAACTGCAAAACATGCGCGAA....................................................................................................................................................................................................................................2761.17700110000212000000
.......................................................................................................................................................................................................................GAACAATTGAGGATTTGAAACCGGC..................................2561.17700020020003000000
..............................................................................................................................................................................................................TGCCGTCAAGAACAATTGAGGATTTGAA........................................2861.17700000021220000000
......................................................................................................................................................................................................................AGAACAATTGAGGATTTGAAACCGGC..................................2661.17700000003000040000
......................................................TATGATAGGCATCCG-AAGAAACAAG..................................................................................................................................................................................................2581.13900000021321000000
...............................................................CATCCG-AAGAAACAAGAGA...............................................................................................................................................................................................1981.13900000900000000000
...............................................................CATCCG-AAGAAACAAGAG................................................................................................................................................................................................1881.13900009000000000000
..............................GCAAAACATGCGCGAAA-GCCA..............................................................................................................................................................................................................................2141.00400000000004000000
.....................................................................................................................................................................................................................................................TACAGGTCATGAATTTCTTCCCAAAA...2621.00200000000200000000
.....................................................................................................CCTCTCATATAGGAGAAATGCTACACA..................................................................................................................................................2711.00100000000001000000
.....................................................................................................................................................................................TCGAAATTGGCCGTCGTACAGCACGTG..................................................................2711.00100000000001000000
............................................................................CAAGAGATTGGCGAGTC.....................................................................................................................................................................................17121.0012000000000012000000
........................................................................................................................................................................................................AGCACGTGCCGTCAAGAACAATTGAGGA..............................................2851.00500000011210000000
.......................................................................................................................................................................................GAAATTGGCCGTCGTACAGCACGTGC.................................................................2611.00100000000001000000
...........................................................................ACAAGAGATTGGCGAGTCACCGTT...............................................................................................................................................................................2411.00100000010000000000
................................................................................................................................TAGACATTTTCTCGACGGA...............................................................................................................................1931.00300000000003000000
........................................................................................................................GCTACACATAGACATTTTCTCGACGGAT..............................................................................................................................2831.00300000020000010000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAATT........................................................................................................................2751.00500000040010000000
...................................................................................................................................................................................TTTCGAAATTGGCCGTC..............................................................................1711.00100000000001000000
....................................................................................................................................................................................TTCGAAATTGGCCGTCGTACA.........................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................TTGTTACAGGTCATGAATTTCTTCCCAA.....2841.00400110000020000000
...........................................................................................................................................................................................TTGGCCGTCGTACAGCACGTGCCG...............................................................2411.00100000000001000000
..............GAAATTGTCCAAAACTGCAAAACATGC.........................................................................................................................................................................................................................................2711.00100010000000000000
...................................................................................................................................................TAAAAAATATTTTCTTACTTGCAT.......................................................................................................2411.00100000000000010000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTACAG........................2261.00600100010021001000
.................................................................................GATTGGCGAGTCACCGTT...............................................................................................................................................................................1811.00100000000001000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTACGT........................2641.00400000000000040000
........................................................................................................................GCTACACATAGACATTTTCTCGACGGAA..............................................................................................................................2831.00300000010000020000
.............................TGCAAAACATGCGCGAAA-GCCAAATATG........................................................................................................................................................................................................................2821.00200000000001100000
...................................................................................................................................................................................TTTCGAAATTGGCCGTCGTACAGCA......................................................................2511.00100000000100000000
...................................................................................................................................................................................TTTCGAAATTGGCCGTCGTACAGCACG....................................................................2711.00100010000000000000
......................................................................................................CTCTCATATAGGAGAAATGCTACACA..................................................................................................................................................2611.00100010000000000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTACAT........................2641.00400000000000040000
..........................................................................AACAAGAGATTGGCGAGTCACCGT................................................................................................................................................................................2411.00100010000000000000
................................................................................................................................................................................AGTTTTCGAAATTGGCCGTCGTACA.........................................................................2511.00100000001000000000
....................................................................................TGGCGAGTCACCGTTTCCCTCTCATATA..................................................................................................................................................................2811.00100010000000000000
...................................................................................................................................................TAAAAAATATTTTCTTACTTGCAA.......................................................................................................2411.00100000000000010000
.........................................................................AAACAAGAGATTGGCGAGTCACCGT................................................................................................................................................................................2511.00100010000000000000
............................................................................................................................CACATAGACATTTTCTCGACGGA...............................................................................................................................2331.00300100000001010000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAA........................................2371.00700000000016000000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAACC.....................................2661.00600010000005000000
...................................................................................TTGGCGAGTCACCGTT...............................................................................................................................................................................1611.00100000000001000000
..................................................................................................................................................................................................................................................TGTTACAGGTCATGAATTTCTTCCCAAA....2841.00400010000210000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGAGTCAC...................................................................................................................................................................................2951.00500500000000000000
....................................................................................TGGCGAGTCACCGTTTCCCTCTCA......................................................................................................................................................................2411.00100000000001000000
........................................................................................................................GCTACACATAGACATTTTCTCGACGGT...............................................................................................................................2731.00300000030000000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAAATA......................................................................................................................2931.00300000021000000000
........................................................................................................................................................................................................................AACAATTGAGGATTTGAAACCGGCCT................................2641.00400100002001000000
.....................................ATGCGCGAAA-GCCAAA............................................................................................................................................................................................................................1621.00200000000002000000
................................................................................................................................................................................................................................AGGATTTGAAACCGGCCTTGTTATTA........................2641.00400000000000040000
.........................................................................AAACAAGAGATTGGCGAGTCACC..................................................................................................................................................................................2381.00800710000000000000
........................................................................GAAACAAGAGATTGGCGAGTCACCGTT...............................................................................................................................................................................2711.00100000010000000000
....................................................................................................................................................................................TTCGAAATTGGCCGTCGTACAGCACGA...................................................................2711.00100000010000000000
.........................................................................AAACAAGAGATTGGCGAG.......................................................................................................................................................................................18110.911000009000001000000
..............................................................................................................................................................................................................TGCCGTCAAGAACAATTGAGG...............................................21100.90900000001007100000
...........................................................TAGGCATCCG-AAGAAACAAGAGAT..............................................................................................................................................................................................2480.88700000001303000000
......................................................TATGATAGGCATCCG-AAGAAACAAGAG................................................................................................................................................................................................2780.88700000021211000000
.........................AAACTGCAAAACATGCGCGAAA-G.................................................................................................................................................................................................................................2370.86600000000006000000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTACAGG.......................2360.83500000020120000000
...................TGTCCAAAACTGCAAAACATGCGCGA.....................................................................................................................................................................................................................................2660.83500000011021000000
....................................................................................................................................................................................................................CAAGAACAATTGAGGATTTGAAACCGGC..................................2860.83500010002200000000
..............................................................................................................................................................................................................TGCCGTCAAGAACAATTGAGGATTTGAAAC......................................3060.83500000011300000000
.........................................................................AAACAAGAGATTGGCGAGTCAC...................................................................................................................................................................................22110.82910710000000000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCGGCCTTGTTACA.........................2640.75300000010000020000
..........CAATGAAATTGTCCAAAACTGCAAAAC.............................................................................................................................................................................................................................................2740.75300000010020000000
..........................AACTGCAAAACATGCGCGAAA-GCC...............................................................................................................................................................................................................................2440.75300010001001000000
..............................GCAAAACATGCGCGAAA-GCCAA.............................................................................................................................................................................................................................2240.75300000000003000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCGGCCT................................1940.75300000010002000000
......................................................TATGATAGGCATCCG-AAGAAACAAGAGAT..............................................................................................................................................................................................2980.75600000006000000000
..............................................................................................................................................................................................................................TGAGGATTTGAAACCGGCCTTGTTACAGG.......................2940.75300000011100000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCGGCCTTGTT............................2340.75300000020000010000
...............................................................................................................AGGAGAAATGCTACAC...................................................................................................................................................1670.71500000000005000000
..........................AACTGCAAAACATGCGCGAAA-GC................................................................................................................................................................................................................................2370.71500000000020030000
..............................................................................................................................................................................................................TGCCGTCAAGAACAATTGAGGATTT...........................................2560.67400000010012000000
....................................................................................................................................................................................................................................TTTGAAACCGGCCTTGTTACAGGTCA....................2660.67400000000021100000
........................................................................................................................................................................................................................AACAATTGAGGATTTGAAACCGGCC.................................2560.67400000000101020000
...............................................................................................................................ATAGACATTTTCTCGACGG................................................................................................................................1930.67200000000002000000
........................................................................................................................GCTACACATAGACATTTTCTCGA...................................................................................................................................2330.67200000010000010000
........................................................................................................................GCTACACATAGACATTTTCTCGACAA................................................................................................................................2630.67200000000000020000
.............................................................................................................................ACATAGACATTTTCTCGACGGATAA............................................................................................................................2530.67200200000000000000
..........................................................................................................................TACACATAGACATTTTCTCGACGG................................................................................................................................2430.67200200000000000000
.......................................................................................................................................................................................................................GAACAATTGAGGATTTGAAACCGGCC.................................2660.67400300000000010000
............................................................................................................................CACATAGACATTTTCTCGACGGATAAAAA.........................................................................................................................2930.67200200000000000000
................................................................................................................................TAGACATTTTCTCGACGGATAAAAAAT.......................................................................................................................2730.67200100000001000000
................AATTGTCCAAAACTGCAAAACATGCGCGA.....................................................................................................................................................................................................................................2930.67200000020000000000
...............................................................................................................................ATAGACATTTTCTCGACGGATAAAAAATATT....................................................................................................................3130.67200000020000000000
..................................................................................................................................................................................................................GTCAAGAACAATTGAGGATTTGAAACC.....................................2760.67400010001200000000
..............................................................................................................................................................................................GCCGTCGTACAGCACGTGCCGTC.............................................................2330.67200000000002000000
.......................................................................................................................TGCTACACATAGACATTTTCTCGACG.................................................................................................................................2630.67200020000000000000
droSec2
CCAAATTGGCGAGCGAAATAGCAGCCAATTGCAAAACTTGCGCCAAA-GCGAAGTATGATAGACATCCA-AGGAAACAGGAGCTCGGGGAAACTCCAATCCCGGGCCATGTATGAGAAATTTTACACATCGATATTTTCTCCACGGATAAGAAATACTTCCTCACCTGAGTGGACAATTTTTCGAAATTCGCCATGGTTCAGCCGATTCCATCTAGAACTATAGAGGATCTAAAACCACCCCTGCTACAGTTAATGAATGTTTTCCCCAAAGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................TGATAGACATCCA-AGGAAACAGGAGC...............................................................................................................................................................................................26100.6062022
........................................................TGATAGACATCCA-AGGAAACAGGAG................................................................................................................................................................................................25100.4043001
........................................................TGATAGACATCCA-AGGAAACAGGA.................................................................................................................................................................................................24100.3033000
........................................................TGATAGACATCCA-AGGAAACAGG..................................................................................................................................................................................................23100.3032010
...........................................................................................................................ACACATCGATATTTTCTCCACGGA...............................................................................................................................2470.2922000
...........................................................................................................................ACACATCGATATTTTCTCCACGG................................................................................................................................2370.2922000
........................................................TGATAGACATCCA-AGGAAACAGGAGCT..............................................................................................................................................................................................27100.2022000
.........................................................GATAGACATCCA-AGGAAACAGGAG................................................................................................................................................................................................24100.2021001
........................................................TGATAGACATCCA-AGGAAACAGGAGT...............................................................................................................................................................................................26100.2021010
..........................................................................................................................................................TACTTCCTCACCTGAGTGGACAATTT..............................................................................................2670.1411000
..........................................................................................................................TACACATCGATATTTTCTCCACGGA...............................................................................................................................2570.1411000
...................................................................................................................................................TAAGAAATACTTCCTCACCTGAGTGGAC...................................................................................................2870.1411000
................................................................................................................................TCGATATTTTCTCCACGGA...............................................................................................................................1970.1411000
..........................................................................................................................................................TACTTCCTCACCTGAGTGGACAAT................................................................................................2470.1411000
........................................................................................................................TTTACACATCGATATTTTCTCCACGGG...............................................................................................................................2770.1411000
................................................................................................................................................................................ATTTTTCGAAATTCGCCATGGTTC..........................................................................2480.1311000
.......................................................ATGATAGACATCCA-AGGAAACAGG..................................................................................................................................................................................................24100.1011000
.......................................................ATGATAGACATCCA-AGGAAACAGGA.................................................................................................................................................................................................25100.1010010
.........................................................GATAGACATCCA-AGGAAACAGGAGC...............................................................................................................................................................................................25100.1010100
.........................................................GATAGACATCCA-AGGAAACAGGA.................................................................................................................................................................................................23100.1011000
..........................................................ATAGACATCCA-AGGAAACAGGAGC...............................................................................................................................................................................................24100.1010010
droYak3
CCAAACTGGCCAATGAAATTGTCCAAAACTGCAAAACGTGCGCGAAA-GCTAAATATGATAGGCATCCG-AAGAAACAAGAGATTGGCGAGTCACCGATTCCCTCTCATGTAGGAGAAATGCTACACATAGACATTTTCTCAACGGATAAAAAGTATTTCCTCACTTGCATCGACAAGTTTTCGAAATTCGCCGTCGTACAGCATGTGCCGTCAAGAACAATTGAGGATTTGAAACCAGCCTTATTGCAGGTCATGAATTTCTTCCCAAAGGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................CACATAGACATTTTCTCAACGGA...............................................................................................................................2345.5022020110000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCCTTATTG...........................2435.0015015000000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCCTTATTGCA.........................2634.3313013000000000
.......................CAAAACTGCAAAACGTGCGCGAAA-GC................................................................................................................................................................................................................................2633.6711011000000000
............................................................................................................................CACATAGACATTTTCTCAACGGATA.............................................................................................................................2543.2513030000000010
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCCTTATTGC..........................2533.00905400000000
.............................................................GGCATCCG-AAGAAACAAGAGATTGGCGT........................................................................................................................................................................................2871.5711000000000011
..........................AACTGCAAAACGTGCGCGAAA-GC................................................................................................................................................................................................................................2331.33404000000000
............................................................................................................................CACATAGACATTTTCTCAACGGAT..............................................................................................................................2441.25505000000000
............................................................................................................................CACATAGACATTTTCTCAACGG................................................................................................................................2241.25505000000000
........................................................................................................................................................................................................................................................AGGTCATGAATTTCTTCCCAAAGGCC26201.1022000000000022
................................................................................................................................................................................................................................AGGATTTGAAACCAGCCTTATTG...........................2331.00303000000000
..........................AACTGCAAAACGTGCGCGAAA-GCTAAA............................................................................................................................................................................................................................2731.00303000000000
....................................................................................TGGCGAGTCACCGATTCCCTCTCATG....................................................................................................................................................................2631.00303000000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTACAGC.......................................................................22200.9519153000010000
............................................................................................................................CACATAGACATTTTCTCAACGGATAA............................................................................................................................2640.75302100000000
..........................AACTGCAAAACGTGCGCGAAA-GCTAA.............................................................................................................................................................................................................................2630.67202000000000
........................AAAACTGCAAAACGTGCGCGAAA-GC................................................................................................................................................................................................................................2530.67202000000000
..................................................................................................................................................ATAAAAAGTATTTCCTCACTTGCA........................................................................................................2430.67202000000000
.............TGAAATTGTCCAAAACTGCAAAACGTG..........................................................................................................................................................................................................................................2730.67202000000000
..................TTGTCCAAAACTGCAAAACGTGC.........................................................................................................................................................................................................................................2330.67202000000000
..................................................................................................................................................ATAAAAAGTATTTCCTCACTTGCAT.......................................................................................................2530.67202000000000
..............................GCAAAACGTGCGCGAAA-GCT...............................................................................................................................................................................................................................2030.67211000000000
.......................................................ATGATAGGCATCCG-AAGAAACAAGAG................................................................................................................................................................................................2680.63500000000005
.................................................CTAAATATGATAGGCATCCG-AAGAAAC.....................................................................................................................................................................................................2750.60303000000000
...................................................................CG-AAGAAACAAGAGATTGGC..........................................................................................................................................................................................2070.57402200000000
...........................................................................................................................................................................................TTCGCCGTCGTACAGCATGTGCCGTC.............................................................2670.57404000000000
...................................................................CG-AAGAAACAAGAGATTGGCGAG.......................................................................................................................................................................................2370.57403100000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGAGT......................................................................................................................................................................................2670.57402200000000
...........................................................................................TCACCGATTCCCTCTCATGTAGGAGAAA...........................................................................................................................................................2840.50202000000000
....................................................................G-AAGAAACAAGAGATTGGCGAGTCA....................................................................................................................................................................................2570.43303000000000
...................................................................CG-AAGAAACAAGAGATTGGCGAGTCA....................................................................................................................................................................................2670.43303000000000
...................................................................CG-AAGAAACAAGAGATTGGCGAGTC.....................................................................................................................................................................................2570.43312000000000
...................................................................CG-AAGAAACAAGAGATTGGCGAGT......................................................................................................................................................................................2470.43303000000000
.................................................CTAAATATGATAGGCATCCG-AAGA........................................................................................................................................................................................................2450.40202000000000
.................................................CTAAATATGATAGGCATCCG-AAG.........................................................................................................................................................................................................2350.40202000000000
.........................................................................................................................................................................................AATTCGCCGTCGTACAGCATGTGCC................................................................2550.40201000010000
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCGTA...........................................................................24200.35706000010000
............................CTGCAAAACGTGCGCGAAA-GCTAAATA..........................................................................................................................................................................................................................2730.33101000000000
..........................AACTGCAAAACGTGCGCGAAA-GCTT..............................................................................................................................................................................................................................2530.33100100000000
...........................................................................................................................................................................................................................AATTGAGGATTTGAAACCAGCCT................................2330.33100100000000
..........................................................................................................................................CTCAACGGATAAAAAGTATTTC..................................................................................................................2230.33100000010000
...................................................................................................................................................................................................................TCAAGAACAATTGAGGATTTGAAACCA....................................2730.33101000000000
...................TGTCCAAAACTGCAAAACGTGCG........................................................................................................................................................................................................................................2330.33101000000000
........................................................................................................................................TTCTCAACGGATAAAAAGT.......................................................................................................................1930.33101000000000
...................TGTCCAAAACTGCAAAACGTGCGCG......................................................................................................................................................................................................................................2530.33101000000000
.......................................................................................................................................................AAGTATTTCCTCACTTGCATC......................................................................................................2130.33101000000000
..................................................................................................................................................................................................................................................TATTGCAGGTCATGAATTTCTTCCCAAA....2830.33101000000000
............................................................................................................................................................................................................TGTGCCGTCAAGAACAATTGAGGATTTG..........................................2830.33100000010000
.......................CAAAACTGCAAAACGTGCGCGAAA-G.................................................................................................................................................................................................................................2530.33100000010000
.....................................................................................................................................................................................................................................................TGCAGGTCATGAATTTCTTCCCAAAGGCC2930.33100100000000
.................................................................................................................................................................................................................................................TTATTGCAGGTCATGAATTTCTTCC........2530.33101000000000
............................CTGCAAAACGTGCGCGAAA-GCTAAA............................................................................................................................................................................................................................2530.33100000010000
.......................CAAAACTGCAAAACGTGCGCGAAA-..................................................................................................................................................................................................................................2430.33101000000000
..................................................................................................................................................ATAAAAAGTATTTCCTCACTTGCATC......................................................................................................2630.33100100000000
..........................AACTGCAAAACGTGCGCGAAA-GCTATC............................................................................................................................................................................................................................2730.33101000000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCCTTATTAT..........................2530.33101000000000
....................................................................................................................................................................................................................................TTTGAAACCAGCCTTATTGCAGGTCATG..................2830.33101000000000
....................................................................G-AAGAAACAAGAGATTGGCGAGTCACC..................................................................................................................................................................................2760.33201100000000
..........................................................................................................................................CTCAACGGATAAAAAGTATTT...................................................................................................................2130.33101000000000
...................................................................................................................................................TAAAAAGTATTTCCTCACTTGCATCGA....................................................................................................2730.33101000000000
..............GAAATTGTCCAAAACTGCAAAACGTG..........................................................................................................................................................................................................................................2630.33101000000000
................................AAAACGTGCGCGAAA-GCTAAA............................................................................................................................................................................................................................2130.33101000000000
.......................................................................................................................................................................................................................GAACAATTGAGGATTTGAAACCAGCCC................................2730.33100100000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCC.................................1830.33101000000000
................................................................................................................................................................................................................................AGGATTTGAAACCAGCCTTATTGC..........................2430.33101000000000
.......................CAAAACTGCAAAACGTGCGCGAAA-T.................................................................................................................................................................................................................................2530.33101000000000
................................................................................................................................................................................................................................AGGATTTGAAACCAGCCTTATTGCA.........................2530.33101000000000
...................................................................................TTGGCGAGTCACCGATTCCCTCTCATG....................................................................................................................................................................2730.33101000000000
.......................................................................................................................................................................................................CAGCATGTGCCGTCAAGAACA......................................................2130.33101000000000
......................................................................................................................................TTTTCTCAACGGATAAAAAGT.......................................................................................................................2130.33101000000000
......................................................................................................................................................................................................................................TGAAACCAGCCTTATTGCAGGTCATGAA................2830.33101000000000
..................TTGTCCAAAACTGCAAAACGTGCGCG......................................................................................................................................................................................................................................2630.33101000000000
...........................ACTGCAAAACGTGCGCGAAA-GC................................................................................................................................................................................................................................2230.33101000000000
.......................................................................................................................................................AAGTATTTCCTCACTTGCATCGACA..................................................................................................2530.33101000000000
.................................................................................................................................................................................................................................GGATTTGAAACCAGCCTTATTG...........................2230.33101000000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCCTTATTGCAGT.......................2830.33100000010000
...................................................................CG-AAGAAACAAGAGATTGGCGAGTCACC..................................................................................................................................................................................2860.33201100000000
...................................................................................................................................................TAAAAAGTATTTCCTCACTTGCATCGAC...................................................................................................2830.33100100000000
...............................................................................................................................................................................................................................GAGGATTTGAAACCAGCCTTATT............................2330.33101000000000
.....................................................................................................................................................................................................TACAGCATGTGCCGTCAAGAACAATTGA.................................................2830.33100100000000
....................................................................G-AAGAAACAAGAGATTGGCGAG.......................................................................................................................................................................................2270.29201100000000
.............................................................................................................................................................................................CGCCGTCGTACAGCATGTGCC................................................................2170.29201100000000
...........................................................................................................................................................ATTTCCTCACTTGCATCGAC...................................................................................................2070.29202000000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGAGTC.....................................................................................................................................................................................2770.29200200000000
............................................................................................CACCGATTCCCTCTCATGTAGG................................................................................................................................................................2240.25100100000000
.........................................................................................................................CTACACATAGACATTTTCTCAACGGA...............................................................................................................................2640.25101000000000
........................................................................................................................GCTACACATAGACATTTTCTCAACGGAT..............................................................................................................................2840.25101000000000
...............................................................................................................................ATAGACATTTTCTCAACGGATA.............................................................................................................................2240.25101000000000
...................................................................................TTGGCGAGTCACCGATTCCCTCTC.......................................................................................................................................................................2440.25101000000000
.......................................................................................CGAGTCACCGATTCCCTCTCATT....................................................................................................................................................................2340.25101000000000
...........................................................TAGGCATCCG-AAGAAACAAGAGATT.............................................................................................................................................................................................2580.25200000000002
..................................................................................ATTGGCGAGTCACCGATTCCC...........................................................................................................................................................................2140.25101000000000
...............................................................................................................................ATAGACATTTTCTCAACGGA...............................................................................................................................2040.25101000000000
..........................AACTGCAAAACGTGCGCGAAA-GCTAAT............................................................................................................................................................................................................................2740.25100000000001
........................................................................................................................................................................................................................................................AGGTCATGAATTTCTTCCCAAAGGC.25200.25501000000004
............................................................................................................................CACATAGACATTTTCTCAACGGATAAA...........................................................................................................................2740.25100000000001
......................................................................................................................................................................................CGAAATTCGCCGTCGTA...........................................................................17200.25500000000005
........................................................TGATAGGCATCCG-AAGAAACA....................................................................................................................................................................................................2180.25202000000000
......................................................................................................................ATGCTACACATAGACATTTTCTCAACGG................................................................................................................................2840.25101000000000
.........................................................................AAACAAGAGATTGGCGAGTCACCG.................................................................................................................................................................................2450.20100100000000
......................................................................................................................................................................................CGAAATTCGCCGTCGTACAGCATGTGC.................................................................2750.20110000000000
.................................................CTAAATATGATAGGCATCCG-AAGAAA......................................................................................................................................................................................................2650.20101000000000
.........................................................................AAACAAGAGATTGGCGAGTCACCGA................................................................................................................................................................................2550.20101000000000
..................................................................................................................................................................................TTTTCGAAATTCGCCGTCGTACAG........................................................................24200.20400000000004
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCGT............................................................................23200.20403000010000
..........................................................................AACAAGAGATTGGCGAGTCACCGA................................................................................................................................................................................2450.20101000000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTAC..........................................................................19200.20413000000000
....................................................................................................................................................................CTTGCATCGACAAGTTTTCGAAATTCGC..................................................................................28200.20400000000004
............................................................................CAAGAGATTGGCGAGTCACCGATTCC............................................................................................................................................................................2650.20100100000000
......................................................................................................................................................................................CGAAATTCGCCGTCGTACAGCATGTGCC................................................................2850.20110000000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTACAGCATGTGC.................................................................2850.20101000000000
..................................................TAAATATGATAGGCATCCG-AAGAAACA....................................................................................................................................................................................................2760.17101000000000
...................................................AAATATGATAGGCATCCG-AAG.........................................................................................................................................................................................................2160.17100000010000
.............................................................................................................................................................................................................GTGCCGTCAAGAACAATC...................................................1860.17101000000000
...................................................................CG-AAGAAACAAGAGATTGGCGAGTCAC...................................................................................................................................................................................2760.17101000000000
....................................................................................................................................................................................TTCGAAATTCGCCGTCGTAC..........................................................................20200.15303000000000
......................................................................................................................................................................................CGAAATTCGCCGTCGTACAGCA......................................................................22200.15321000000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTACA.........................................................................20200.15312000000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGAGC......................................................................................................................................................................................2670.14100100000000
................................................................ATCCG-AAGAAACAAGAGATTGG...........................................................................................................................................................................................2270.14101000000000
.............................................................................................................................................................................................CGCCGTCGTACAGCATGTGCCG...............................................................2270.14101000000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGAG.......................................................................................................................................................................................2570.14101000000000
..........................................................................................................................................................TATTTCCTCACTTGCATCGACAAG................................................................................................2470.14100010000000
.............................................................GGCATCCG-AAGAAACAAGAGATTGGCG.........................................................................................................................................................................................2770.14101000000000
....................................................................G-AAGAAACAAGAGATTGGCGAGT......................................................................................................................................................................................2370.14101000000000
...........................................................................................................................................................................................TTCGCCGTCGTACAGCATGTGCCGTCAA...........................................................2870.14101000000000
...................................................................CG-AAGAAACAAGAGATTGGCGA........................................................................................................................................................................................2270.14101000000000
.............................................................................................................................................................................................CGCCGTCGTACAGCATGTGCCGTCA............................................................2570.14101000000000
...................................................................CG-AAGAAACAAGAGATTGGCGAGTG.....................................................................................................................................................................................2570.14101000000000
.............................................................................................................................................................................................CGCCGTCGTACAGCATGTGCCGTCAT...........................................................2670.14101000000000
.................................................................TCCG-AAGAAACAAGAGATTGGCGA........................................................................................................................................................................................2470.14101000000000
...................................................................CG-AAGAAACAAGAGATTGGCT.........................................................................................................................................................................................2170.14101000000000
..................................................................CCG-AAGAAACAAGAGATTGGCGAGTCA....................................................................................................................................................................................2770.14101000000000
..........................................................................................................................................................TATTTCCTCACTTGCATCGA....................................................................................................2070.14101000000000
.............................................................................................................................................................................................CGCCGTCGTACAGCATGTGCCGTC.............................................................2470.14101000000000
...........................................................................................................................................................................................TTCGCCGTCGTACAGCATGTGCCG...............................................................2470.14100010000000
...........................................................TAGGCATCCG-AAGAAACAAGAGATA.............................................................................................................................................................................................2580.13100000010000
......................................................TATGATAGGCATCCG-AAGAAACAAGAGATT.............................................................................................................................................................................................3080.13100000000001
.........................................................................AAACAAGAGATTGGCGAGTCA....................................................................................................................................................................................2180.13100010000000
................................................................................................................................................................................................CGTCGTACAGCATGTGCCGTCAA...........................................................2390.11100000010000
.........................................................................................................................................................................................................................ACAATTGAGGATTTGAAACC.....................................2090.11100100000000
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCGTACA.........................................................................26200.10202000000000
.........................................................................................................................................................................................AATTCGCCGTCGTACAGC.......................................................................18200.10220000000000
................................................................................................................................................................................AGTTTTCGAAATTCGCCGTCGTAC..........................................................................24200.10202000000000
....................................................................................................................................................................................TTCGAAATTCGCCGTCGTACAGCA......................................................................24200.10202000000000
......................................................................................................................................................................................CGAAATTCGCCGTCGTACAGC.......................................................................21200.10202000000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTA...........................................................................18200.10220000000000
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCGTAT..........................................................................25200.10202000000000
..............................................................................................................................................................................................................................................................TGAATTTCTTCCCAAAGGCC20200.10202000000000
.....................................................................................................................................................................TTGCATCGACAAGTTTTCGA.........................................................................................20200.10200100010000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTACAG........................................................................21200.10211000000000
......................................................................................................................................................................TGCATCGACAAGTTTTCGA.........................................................................................19200.10200110000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTACAGCATG....................................................................25200.10202000000000
.......................................................................................................................................................................................GAAATTCGCCGTCGTACAGC.......................................................................20200.10220000000000
..............................................................................................................TAGGAGAAATGCTACACATAG...............................................................................................................................................21180.06101000000000
.....................................................................................................................................................................................TCGAAATTCGCCGTCGTACAGCA......................................................................23200.05110000000000
..........CAATGAAATTGTCCAAAACTG...................................................................................................................................................................................................................................................21200.05101000000000
....................................................................................................CCCTCTCATGTAGGAGAAA...........................................................................................................................................................19200.05101000000000
.............................................................................................................................................................................................................................................................ATGAATTTCTTCCCAAAGGCC21200.05100100000000
......................................................................................................................................................................TGCATCGACAAGTTTTCGT.........................................................................................19200.05100100000000
...................................................................................................TCCCTCTCATGTAGGAGAAATGCTA......................................................................................................................................................25200.05100000100000
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCGTACAG........................................................................27200.05101000000000
....................................................................................................................................................................................TTCGAAATTCGCCGTCGTACAGCATG....................................................................26200.05101000000000
........................................................................................................................................................................................................................................................AGGTCATGAATTTCTTCCCAAAGGCA26200.05100000000001
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCGTAC..........................................................................25200.05100100000000
.........................................................................................................................................................................................................................................................GGTCATGAATTTCTTCCCAAAGG..23200.05101000000000
.........................................................................................................................................................................................................................................................GGTCATGAATTTCTTCCCAAAGGC.24200.05100100000000
........GCCAATGAAATTGTCCAAAACTGC..................................................................................................................................................................................................................................................24200.05101000000000
..............................................................................................CCGATTCCCTCTCATGTAGGAGAAA...........................................................................................................................................................25200.05101000000000
...............................................................................................................................................................................AAGTTTTCGAAATTCGCCGTCG.............................................................................22200.05101000000000
...........AATGAAATTGTCCAAAACTGC..................................................................................................................................................................................................................................................21200.05101000000000
......................................................................................................................................................................................CGAAATTCGCCGTCGTACAGCATG....................................................................24200.05101000000000
........................................................................................................................................................................................................................................................AGGTCATGAATTTCTTCCCAAAGG..24200.05101000000000
....................................................................................................CCCTCTCATGTAGGAGAAATGC........................................................................................................................................................22200.05100001000000
......................................................................................................CTCTCATGTAGGAGAAATGCT.......................................................................................................................................................21200.05100100000000
...............................................................................................CGATTCCCTCTCATGTAGGAGT.............................................................................................................................................................22200.05101000000000
........................................................................................................................................................................................AAATTCGCCGTCGTACAGCAT.....................................................................21200.05101000000000
droEre2
CCAAATTGGCGAGCGAAATAGCAGCCAATTGCAAAACTTGCTCCAAA-GCGAAGTACGACAGGCATCCA-AAGAAACAGGAGCTCGGAGAAACTCCAGTCCCGGGCCATGTAGGAGAAATTTTACACATCGATATTTTCTCCACGGATAAGAAATACTTTCTCACCTGCGTGGACAAGTTTTCGAAATTCGCCATGGTTCAGCCGATTCCATCTAGAACCATAGAGGATCTAAAACCGCCCCTGCTACAGTTAATGAATGTTTTCCCTAAAGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................ATCCA-AAGAAACAGGAGCTCGGAG.........................................................................................................................................................................................2441.0044000000
...........................................................................................ACTCCAGTCCCGGGCCATC....................................................................................................................................................................1911.0010001000
.............................................................................................TCCAGTCCCGGGCCATGTAGGAGAAA...........................................................................................................................................................2611.0011000000
................................................................ATCCA-AAGAAACAGGAGCTCGG...........................................................................................................................................................................................22170.881515000000
.................................................................................................................................................................................GTTTTCGAAATTCGCCATGGTTCAGC.......................................................................2650.6033000000
................................................................ATCCA-AAGAAACAGGAGCTCGGAGA........................................................................................................................................................................................2540.5022000000
...............................................................................................................................ATCGATATTTTCTCCACGGATAAGA..........................................................................................................................2580.5042000002
.................................................................................................................................................................................GTTTTCGAAATTCGCCATGGTTCAG........................................................................2550.4022000000
..................................................................................................................................................................................TTTTCGAAATTCGCCATGGTTCAGC.......................................................................2550.4022000000
...............................................................................................................................ATCGATATTTTCTCCACGGATAAGAAA........................................................................................................................2780.3833000000
................................................................ATCCA-AAGAAACAGGAGCTCGGAGAA.......................................................................................................................................................................................2640.2511000000
................................................................ATCCA-AAGAAACAGGAGCTCGGA..........................................................................................................................................................................................2340.2511000000
...............................................................................................................................ATCGATATTTTCTCCACGGATAAGAA.........................................................................................................................2680.2522000000
.................................................................TCCA-AAGAAACAGGAGCTCGGAG.........................................................................................................................................................................................2340.2511000000
................................................................ATCCA-AAGAAACAGGAGCTCGGAGAAAC.....................................................................................................................................................................................2840.2511000000
...............................................................................................................................ATCGATATTTTCTCCACGGATAAGAAAT.......................................................................................................................2880.2521000100
................................................................ATCCA-AAGAAACAGGAGCTCGGAGATT......................................................................................................................................................................................2740.2511000000
...........................................................................................................................................................................................TTCGCCATGGTTCAGCCGATTCCATC.............................................................2640.2511000000
.................................................................................................................................................................................GTTTTCGAAATTCGCCATGGTTCAC........................................................................2550.2011000000
...............................................................................................................................ATCGATATTTTCTCCACGGATAAG...........................................................................................................................2480.1311000000
................................................................................................................................TCGATATTTTCTCCACGGATA.............................................................................................................................2190.1111000000
.....................................................................................................................................................................................................................TAGAACCATAGAGGATCTAAAACA.....................................24170.0611000000
.....................................................................................................................................................................................................................TAGAACCATAGAGGATCTAAA........................................21180.0611000000
.....................................................................................................................................................................................................................TAGAACCATAGAGGATCTAAAA.......................................22180.0611000000
.................................................................TCCA-AAGAAACAGGAGCTC.............................................................................................................................................................................................19180.0611000000
dp5
CCAAACTAGCCAACGAGGTGGACCTAAATTGTAAGGTTTGCGCAAGG-GAAAAGTACTATAGGCACCCA-AAAAACCAAGAGCTCGGCCAAACGCCGATTCCCTCACAGGCTGGAGAGATGTTACACGTTGACATCTTCTCCAAAGACAAAAAATTCTTCCTAACCTGCGTAGACAAACTATCCAAGTTCGCAATGGTGCAACCCATTGCATCCAGGACAATAGAGGACTTACGACCCCCTCTACTGATACTAATGAACGTCTTCCCTAGGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................AATGAACGTCTTCCCTAGGGC.21118.001801700100000
............................................................................................................................................................................................................................................................AATGAACGTCTTCCCTAGGGCA2219.0090900000000
............................................................................................................................................................................................................................................................AATGAACGTCTTCCCTAGGG..2016.0060500100000
..........................................................................................................................TACACGTTGACATCTTCTCCAAAGA...............................................................................................................................2515.0050500000000
............................................................................................................................CACGTTGACATCTTCTCCAAAGACA.............................................................................................................................2515.0050500000000
............................................................................................................................CACGTTGACATCTTCTCCAAAGAC..............................................................................................................................2415.0050500000000
............................................................................................................................CACGTTGACATCTTCTCCAAAGA...............................................................................................................................2314.0040400000000
.............................................................................................................................................................................................................................................................ATGAACGTCTTCCCTAGGGC.2013.0030300000000
..........................................................................................................................TACACGTTGACATCTTCTCCAAAGAC..............................................................................................................................2612.0020200000000
..........................................................................................................................TACACGTTGACATCTTCTCCAAAGACA.............................................................................................................................2712.0020200000000
..........................................................................................................................TACACGTTGACATCTTCTCCAAAGACAA............................................................................................................................2811.0010100000000
...........................................................................................................................ACACGTTGACATCTTCTCCAAAGA...............................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................................................ACTAATGAACGTCTTCCCTAGGGC.2411.0010100000000
..............................................................................................................................................................................................................TTGCATCCAGGACAATAGAGGACT............................................2411.0010100000000
.............................................................................................................................ACGTTGACATCTTCTCCAAAGA...............................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................TGAACGTCTTCCCTAGGGCA2011.0010100000000
............................................................................................................................................................................................................................................................AATGAACGTCTTCCCTAGG...1911.0010100000000
..........................................................................................................................TACACGTTGACATCTTCTCCAAAG................................................................................................................................2411.0010100000000
...........................................................................................................................ACACGTTGACATCTTCTCCAAAGACA.............................................................................................................................2611.0010100000000
...........................................................................................................................ACACGTTGACATCTTCTCCAAAG................................................................................................................................2311.0010100000000
.............................................................................................................................ACGTTGACATCTTCTCCAAAGACAAA...........................................................................................................................2611.0010100000000
...............................................................................................................................................................................................................TGCATCCAGGACAATAGAGGACTTACG........................................2711.0010100000000
...............................................................................................................................................................................................................TGCATCCAGGACAATAGAGGACTT...........................................2411.0010100000000
..............................................................................................................................CGTTGACATCTTCTCCAAAGAC..............................................................................................................................2211.0010100000000
...................................................................................................TCCCTCACAGGCTGGAGAGATG.........................................................................................................................................................2230.6720200000000
..................................................................................................................................................................................................TGGTGCAACCCATTGCATCCAGGACAA.....................................................2730.6720200000000
..................................................................................................................................................................................................TGGTGCAACCCATTGCATCCAGGAC.......................................................2530.6720200000000
..................................................................................................................................................................................................TGGTGCAACCCATTGCATCCAGGACA......................................................2630.6720200000000
..................................................................................................TTCCCTCACAGGCTGGAGAGATGT........................................................................................................................................................2430.6720200000000
...................................................AAGTACTATAGGCACCCA-AAAAAC......................................................................................................................................................................................................2420.5010100000000
..........................................................................................................................................................................TAGACAAACTATCCAAGTTCGCAATGG.............................................................................2720.5010100000000
...................................................AAGTACTATAGGCACCCA-AAAAACCA....................................................................................................................................................................................................2620.5010100000000
...................................................AAGTACTATAGGCACCCA-AAAAACA.....................................................................................................................................................................................................2520.5010100000000
......................................................................................................................................................................TGCGTAGACAAACTATCCAAGTTCG...................................................................................2580.3830300000000
.......................................................................................................TCACAGGCTGGAGAGATG.........................................................................................................................................................1830.3310100000000
...................................................................................................TCCCTCACAGGCTGGAGAGA...........................................................................................................................................................2030.3310100000000
.......................................................................................................TCACAGGCTGGAGAGATGT........................................................................................................................................................1930.3310100000000
..................................................................................................TTCCCTCACAGGCTGGAGAG............................................................................................................................................................2030.3310100000000
...................................................................................................TCCCTCACAGGCTGGAGAGATGT........................................................................................................................................................2330.3310100000000
........................................................................................CAAACGCCGATTCCCTCACAGGC...................................................................................................................................................................2330.3310100000000
.......................................................................................................................................................................GCGTAGACAAACTATCCAAGTTCG...................................................................................2480.2520200000000
.....................................................................................................................................................................................................TGCAACCCATTGCATCCAGGACA......................................................2340.2510100000000
.....................................................................................................................................................................................................TGCAACCCATTGCATCCAGGAC.......................................................2240.2510100000000
...........................................................TAGGCACCCA-AAAAACCA....................................................................................................................................................................................................1880.1310100000000
......................................................................................................................................................................TGCGTAGACAAACTATCCAAGTTCGC..................................................................................2680.1310100000000
.......................................................................................................................................................................GCGTAGACAAACTATCCAAGTTC....................................................................................2380.1310100000000
......................................................................................................................................................................TGCGTAGACAAACTATCCAAGTTC....................................................................................2480.1310100000000
........................................................................................................................................................................CGTAGACAAACTATCCAAGTTCG...................................................................................2380.1310100000000
..................................................................................................................................................................................................TGGTGCAACCCATTGCATCCAGG.........................................................2390.1110100000000
......................................................................................................................................................................TGCGTAGACAAACTATCCAAGTT.....................................................................................23100.1010100000000
......................................................................................................................................................................TGCGTAGACAAACTATCCAAGT......................................................................................22100.1010100000000
droPer2
CCAAATTAGCAGACGAGGTTGTTGCAAATTGCAAAATTTGTCAAACG-GCCAAGTACAACCGACACCCACAAAAAACAAATACTTGGGGAAACACCCATACCCTCGTATGTGGGCGAAATGCTACATATCGACGTATATTCAACCGATAAAAAATATTTCCTCACATGCATAGACAAGCTTTCAAAATTTGCAGTTGTCCAACCCATCGCTTCAAGAACAATAGTTGACATACAATCAGCAATTTTACAACTTCTCAATTTTTACCGGAACACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................TTGACATACAATCAGCAATTTTACAACT......................2840.251010000
....................................................................................................................................................................................................................................................TTACAACTTCTCAATTTTTACCGGAA....2640.251010000
....................................................................................TGGGGAAACACCCATACCCTCGTATG....................................................................................................................................................................26100.101010000
..........................................................................................................................................................................................ATTTGCAGTTGTCCAACCCATC..................................................................22100.101010000
....................................................................................................................................................................................TTCAAAATTTGCAGTTGTCCAACCCA....................................................................26120.081010000
......................................................................................................................ATGCTACATATCGACGTATATTCAAC..................................................................................................................................26150.071010000
droWil2
CAAGAATGGCCAATGAAAT-GTACGAAATTGCAAAACATGTGCTAGG-GCTAAATATGATAGACACCCC-AA-AAACAGGAGCTTGGGGAGTCACCGATCTCCTCACATGTAGGAGAGATGTTA------GACATTTTCTCCACTGACAGGAAATACTTTCTAACTTGCATCGACAAGTTCTCTAAGTTTGCTATTGTCCAACCGATCCCCTCAAGAACCATTGTGGATCTGAAGCCAGCTCTAATGCAACTAATGAATTTTTTTCCTAAGGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................CACATGTAGGAGAGATGTTA------GA..............................................................................................................................................2211.00100001
...........................................................................................TCACCGATCTCCTCACATGTA..................................................................................................................................................................2111.00100010
.........................AAATTGCAAAACATGTGCTAGG-GC................................................................................................................................................................................................................................24200.40805021
.........................................................................................................................................................ATACTTTCTAACTTGCATCGACA..................................................................................................23140.21302010
.....................................................................................................................................ATTTTCTCCACTGACAGGAAATAC.....................................................................................................................2450.20101000
...............................................................................................................................................................................................CTATTGTCCAACCGATCCCCTCAAG..........................................................25110.18202000
...................................................................................................................................................................................TCTCTAAGTTTGCTATTGTCCAACC......................................................................25120.17202000
........................................................................................................................................................................CATCGACAAGTTCTCTAAGT......................................................................................20120.17220000
............................TTGCAAAACATGTGCTAGG-GC................................................................................................................................................................................................................................21200.15300120
.............................TGCAAAACATGTGCTAGG-GCT...............................................................................................................................................................................................................................21200.10202000
..................................AACATGTGCTAGG-GCTAAATAT.........................................................................................................................................................................................................................22200.10200200
............................TTGCAAAACATGTGCTAGG-G.................................................................................................................................................................................................................................20200.10200110
...............................................................................................................................................................................................CTATTGTCCAACCGATCCCCTCAAGAAC.......................................................28110.09101000
...........................................................................................................................................................................................................CGATCCCCTCAAGAACCATTG..................................................21110.09101000
...............................................................................................................................................................................................CTATTGTCCAACCGATCCCCTC.............................................................22110.09101000
....................................................................................................................................................................................................GTCCAACCGATCCCCTCAAGAACCATTG..................................................28110.09101000
....................................................................................................................................................................................................GTCCAACCGATCCCCTCAAGAACCAT....................................................26110.09101000
......................................................................................................................................................................TGCATCGACAAGTTCTCTAAGTT.....................................................................................23120.08100010
.......................................................................................................................................................................................TAAGTTTGCTATTGTCCAACCGATCCCC...............................................................28120.08101000
....................................................................................................................................................................CTTGCATCGACAAGTTCTCTAAGTT.....................................................................................25120.08100010
....................................................................................................................................................................................CTCTAAGTTTGCTATTGTCCAACCGA....................................................................26120.08101000
......................................................................................................................................................................TGCATCGACAAGTTCTCTAAGTTTG...................................................................................25120.08101000
...................................................................................................................................................................ACTTGCATCGACAAGTTCTCTAAGTT.....................................................................................26120.08100010
..................................................................................................................................................................................TTCTCTAAGTTTGCTATTGTCCAACCGA....................................................................28120.08101000
......................................................................................................................................................................TGCATCGACAAGTTCTCTAAGTTTGC..................................................................................26120.08101000
................................................................................................................................................................................................................CCCTCAAGAACCATTGTGGATCTGA.........................................25130.08101000
...............................................................................................................................................................................AAGTTCTCTAAGTTTGCTATTG.............................................................................22130.08101000
...................................................................................................................................................................ACTTGCATCGACAAGTTCTCTAAG.......................................................................................24130.08100010
..............................................................................................................................................................................................................TCCCCTCAAGAACCATTGTGGATCTGA.........................................27130.08101000
.................................................................................................................................................................................................................CCTCAAGAACCATTGTGGATCTG..........................................23130.08101000
.............................................................................................................................................................................................TGCTATTGTCCAACCGATCCCC...............................................................22130.08101000
...............................................................................................................................................................................AAGTTCTCTAAGTTTGCTATTGTC...........................................................................24130.08101000
...............................................................................................................................................................................................................CCCCTCAAGAACCATTGTGGATCTGA.........................................26130.08101000
..........................................................................................................................................................................................................................CCATTGTGGATCTGAAGCCAGCTCTAATG...........................29130.08110000
...................................................................................................................................................................................................................TCAAGAACCATTGTGGATCTGAAGCCA....................................27130.08101000
..............................................................................................................................................................................................................................TGTGGATCTGAAGCCAGCTCTAATG...........................25130.08100010
...............................................................................................................................................................................AAGTTCTCTAAGTTTGCTATTGT............................................................................23130.08101000
...............................................................................................................................................................................................................CCCCTCAAGAACCATTGTGGATCTGAA........................................27130.08101000
...........................................................................................................................................................................................TTTGCTATTGTCCAACCGATCCCC...............................................................24130.08101000
...............................................................................................................................................................................................................................GTGGATCTGAAGCCAGCTCTAATGCA.........................26130.08101000
..........................................................................................................................................................TACTTTCTAACTTGCATCGACAAGT...............................................................................................25140.07101000
..........................................................................................................................................................................................................................CCATTGTGGATCTGAAGCCAGCTCT...............................25140.07101000
.........................................................................................................................................................................................................................ACCATTGTGGATCTGAAGCCAGCTC................................25140.07100010
................................................................................................................................................................................................................CCCTCAAGAACCATTGTGGATCT...........................................23140.07101000
..........................................................................................................................................................................................................................CCATTGTGGATCTGAAGCCAGCTC................................24140.07101000
........................................................................................................................................................................................................................AACCATTGTGGATCTGAAGCCAGCTC................................26140.07101000
..........................................................................................................................TA------GACATTTTCTCCACTGACA.............................................................................................................................21150.07101000
.......................................GTGCTAGG-GCTAAATATGATAG....................................................................................................................................................................................................................22200.05101000
.............................TGCAAAACATGTGCTAGG-GCTA..............................................................................................................................................................................................................................22200.05101000
............................TTGCAAAACATGTGCTAGG-GCTAAA............................................................................................................................................................................................................................25200.05101000
...........................ATTGCAAAACATGTGCTAGG-GG................................................................................................................................................................................................................................22200.05101000
...........................................TAGG-GCTAAATATGATAGACACCC..............................................................................................................................................................................................................24200.05101000
.................................AAACATGTGCTAGG-GCTAAATAT.........................................................................................................................................................................................................................23200.05100100
...............................CAAAACATGTGCTAGG-GCTAAA............................................................................................................................................................................................................................22200.05101000
...................................ACATGTGCTAGG-GCTAAATATGA.......................................................................................................................................................................................................................23200.05101000
.........................................GCTAGG-GCTAAATATGATAGACA.................................................................................................................................................................................................................23200.05101000
.............................................GG-GCTAAATATGATAGACACCC..............................................................................................................................................................................................................22200.05101000
.........................AAATTGCAAAACATGTGCTAGG-G.................................................................................................................................................................................................................................23200.05101000
.........................AAATTGCAAAACATGTGCTAGG-GCTA..............................................................................................................................................................................................................................26200.05101000
............................TTGCAAAACATGTGCTAGG-GCTAA.............................................................................................................................................................................................................................24200.05101000
......................................TGTGCTAGG-GCTAAATATGATAGACACCC..............................................................................................................................................................................................................29200.05100010
..................................AACATGTGCTAGG-GCTAAATATGA.......................................................................................................................................................................................................................24200.05101000
..............................GCAAAACATGTGCTAGG-GCTA..............................................................................................................................................................................................................................21200.05101000
droVir3
CCAAACTAACGAACGAAATTGTGCAAAACTGCAAAACGTGCGCTAAT-GCCATATACGATAGACAAAGT-AGAAAACAAGAGTTGGGTGAAACACCAATCCCGTCGCATGTTGGAGAGATGCTACACA------TATTCTCGACCGACAAAAAATTTTTTCTTACTTGCATCGACAAGTTTTCAAATTTCGCTGTCGTACAGCCTATCTCTTCAAGGACCATTAAGGACCTGAAGCGAGAATTTCTTCAACTCATGAACTTTTTTCCAAAAGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................GCGAGAATTTCTTCAACTCATGAACT..............2611.001000000000000000000000000000100000000000000000000000000000000000
...................TGTGCAAAACTGCAAAACGTGCG........................................................................................................................................................................................................................................2360.171000000000100000000000000000000000000000000000000000000000000000
...............AAATTGTGCAAAACTGCAAAACGTG..........................................................................................................................................................................................................................................2560.171001000000000000000000000000000000000000000000000000000000000000
..........................................................................................AACACCAATCCCGTCGCATGTTGGAG..............................................................................................................................................................2660.171000000000000000000000000000000000000100000000000000000000000000
...............AAATTGTGCAAAACTGCAAAACGTGA.........................................................................................................................................................................................................................................2660.171000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................ATGTTGGAGAGATGCTACA....................................................................................................................................................1960.171000000000000000000000000000000000000001000000000000000000000000
............................................................................................CACCAATCCCGTCGCATGTTGG................................................................................................................................................................2260.171001000000000000000000000000000000000000000000000000000000000000
..................TTGTGCAAAACTGCAAAACGTGC.........................................................................................................................................................................................................................................2370.141000000000000000000000000010000000000000000000000000000000000000
.......................CAAAACTGCAAAACGTGCGCTCC....................................................................................................................................................................................................................................2370.141000000000000000000000000000001000000000000000000000000000000000
droMoj3
CAAGAATGGCCAATGAAATAGTACAAAATTGCAGAACATGTGCTAGG-GCTAAATATGATAGACACCCC-A----ACAAGAGCTTGGAGAGACACCGATCCCCTCACATGTAGGAGAGATGTTACACATAGACATTTTCTCCACTGACAGGAAATACTTTCTAACTTGCATCGACAAGTTCTCTAAGTTTGCTATTGTCCAACCGATCCCCTCAAGAACCATTGTGGATCTGAAGCCAGCTCTAATGCAAATCATGAATTTTTTTCCTAAAACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................CAAAATTGCAGAACATGTGCTAGG-GC................................................................................................................................................................................................................................2611.001000001
..........................................................................................................................TACACATAGACATTTTCTCCACTGACAGG...........................................................................................................................2911.001100000

Generated: 05/18/2015 at 07:32 AM