ID:

dan_3403

 Coordinate:

scaffold_8577:3751-3901 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.4 -15.4 -14.6 -14.5

Flybase annnotation

exon [dana_GLEANR_280:2]; CDS [Dana\GF20391-cds]; intron [Dana\GF20391-in]

Repeatable elements

NameClassFamilyStrand
Hoana6DNAhAT-Ac-
mature
  1. scaffold_2729:192-212 -
  2. dan_3403  scaffold_8577:3752-3772 +
  3. scaffold_13137:1181439-1181459 +
  4. scaffold_13239:193786-193806 -
  5. scaffold_13248:1394129-1394149 -
  6. scaffold_13260:1224649-1224669 +
  7. scaffold_13266:185245-185265 -
  8. scaffold_13266:15971381-15971401 -
  9. scaffold_13337:7165877-7165897 -
  10. scaffold_13339:1771609-1771629 -
  11. scaffold_13340:10535737-10535757 +
star
  1. scaffold_5048:3739-3765 -
  2. dan_3403  scaffold_8577:3805-3831 +
  3. scaffold_12984:752913-752939 -
  4. scaffold_13137:1181492-1181518 +
  5. scaffold_13239:193727-193753 -
  6. scaffold_13248:1394070-1394096 -
  7. scaffold_13260:1224702-1224728 +
  8. scaffold_13266:185186-185212 -
  9. scaffold_13266:15971322-15971348 -
  10. scaffold_13337:7165818-7165844 -
  11. scaffold_13339:1771550-1771576 -
  12. scaffold_13340:10535790-10535816 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGTATTCGCCTTGCAAAAATTTGTCCATTTTCTCCGCCAACACCAATATTAACTTTCACGTGTAGATCTCCGCAGTTGTTCGCCAAAAGTAAAGATGTGCAAGCTTGCCACTATCGTTTACTATCGGCACTCAAACATCGATAGTGGTTCGCAAACCCAAATATTCGATATATCGATACTATCGTGAGTGGCCGACCCAGCTCTAGCTATTTACATCTACAAGGTTCTGAAGCAGGTTCACCCTGACACT
***************************************************.........((....................(((...(((((.((((((((....))).)).)))..)))))...)))))************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V105
male body		 V039
embryo
 V055
head
................AAAATTTGTCCATTTTCTCCG...................................................................................................................................................................................................................... 21 0 11 0.27 3 3 0 0 0 0 0
...................................................AACTTTCACGTGTAGATCTCC................................................................................................................................................................................... 21 0 11 0.27 3 1 2 0 0 0 0
..........................................................ACGTGTAGATCTCCGCAGTTGTTCG........................................................................................................................................................................ 25 0 11 0.27 3 0 0 3 0 0 0
..........................................................ACGTGTAGATCTCCGCAGTTG............................................................................................................................................................................ 21 0 12 0.25 3 2 0 0 1 0 0
................................................................AGATCTCCGCAGTTGTTCGCC...................................................................................................................................................................... 21 0 13 0.23 3 3 0 0 0 0 0
.................AAATTTGTCCATTTTCTCCGCCAACAC............................................................................................................................................................................................................... 27 0 11 0.18 2 0 2 0 0 0 0
...................ATTTGTCCATTTTCTCCGCCA................................................................................................................................................................................................................... 21 0 11 0.18 2 2 0 0 0 0 0
..........................................................ACGTGTAGATCTCCGCAGTT............................................................................................................................................................................. 20 0 12 0.17 2 2 0 0 0 0 0
........................................................................................................CTTGCCACTATCGTTTACTATCGGCAC........................................................................................................................ 27 0 12 0.17 2 2 0 0 0 0 0
.............................................................................................................CACTATCGTTTACTATCGGCA......................................................................................................................... 21 0 14 0.14 2 2 0 0 0 0 0
........................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACCCT...... 29 0 20 0.10 2 0 2 0 0 0 0
.........................................................................................................................................................................................................................CTACAAGGTTCTGAAGCAG............... 19 0 20 0.10 2 0 0 1 1 0 0
.........................................................................................................................................................................................................................CTACAAGGTTCTGAAGCAGGTT............ 22 0 20 0.10 2 0 1 0 1 0 0
................AAAATTTGTCCATTTTCTCC....................................................................................................................................................................................................................... 20 0 11 0.09 1 0 1 0 0 0 0
..........CTTGCAAAAATTTGTCCATTT............................................................................................................................................................................................................................ 21 0 11 0.09 1 0 1 0 0 0 0
.......CGCCTTGCAAAAATTTGTCC................................................................................................................................................................................................................................ 20 0 11 0.09 1 0 1 0 0 0 0
.................AAATTTGTCCATTTTCTCCGC..................................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
.......................GTCCATTTTCTCCGCCAACACC.............................................................................................................................................................................................................. 22 0 11 0.09 1 1 0 0 0 0 0
...........................ATTTTCTCCGCCAACACC.............................................................................................................................................................................................................. 18 0 11 0.09 1 0 1 0 0 0 0
................AAAATTTGGCCATTTTCTCCG...................................................................................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0
..................AATTTGTCCATTTTCTCCGCC.................................................................................................................................................................................................................... 21 0 11 0.09 1 0 1 0 0 0 0
....................................................ACTTTCACGTGTAGATCTCC................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
...................................................AAATTTCACGTGTAGATCTCC................................................................................................................................................................................... 21 1 11 0.09 1 0 1 0 0 0 0
.........................................................CACGTGTAGATCTCCGCAGTTGTTCGCC...................................................................................................................................................................... 28 0 11 0.09 1 0 0 1 0 0 0
.................................................TTAACTTTCACGTGTAGATC...................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
..................AATTTGTCCATTTTCTCCGC..................................................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
......................TGTCCATTTTCTCCGCCAACACCGA............................................................................................................................................................................................................ 25 1 11 0.09 1 1 0 0 0 0 0
....................................................ACTTTCACGTGTGGATCTCCG.................................................................................................................................................................................. 21 1 11 0.09 1 1 0 0 0 0 0
.........CCTTGCAAAAATTTGTCCATT............................................................................................................................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0 0
....................TTTGTCCATTTTCTCCGCCAACACC.............................................................................................................................................................................................................. 25 0 11 0.09 1 0 1 0 0 0 0
...............................................TATTGACTTTCACGTGTAGA........................................................................................................................................................................................ 20 1 11 0.09 1 0 0 1 0 0 0
.......................GGCTATTTTCTCCGCCAACACC.............................................................................................................................................................................................................. 22 2 11 0.09 1 0 1 0 0 0 0
.....................................................CTTTCACGTGTAGATCTCCGCT................................................................................................................................................................................ 22 1 12 0.08 1 1 0 0 0 0 0
..........................................................ACGTGTAGATCTCCGCAGTTGT........................................................................................................................................................................... 22 0 12 0.08 1 0 0 0 1 0 0
......................................................TTGCACGTGTAGATCTCCGCA................................................................................................................................................................................ 21 1 12 0.08 1 0 0 1 0 0 0
......................................................................................AAAGTAAAGATGTGCAAGCTTGCCACT.......................................................................................................................................... 27 0 12 0.08 1 0 0 0 1 0 0
......................................................TTTCACGTGTAGATCTCCGCA................................................................................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0 0
.....................................................ATTGCACGTGTAGATCTCCGC................................................................................................................................................................................. 21 2 12 0.08 1 0 0 0 0 0 1
..........................................................................................................TGCCACTATCGTTTACTATCGGCACC....................................................................................................................... 26 1 12 0.08 1 0 1 0 0 0 0
.............................................................TGTAGATCTCCGCAGTTGTTCGCCAAAAG................................................................................................................................................................. 29 0 13 0.08 1 1 0 0 0 0 0
...............................................................TAGATCTCCGCAGTTGTTCGC....................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0
...................................................................TCTCCGCAGTTGTTCGCCAAAAGT................................................................................................................................................................ 24 0 13 0.08 1 0 0 1 0 0 0
...............................................................TAGATCTCCGCAGTTGTTCGCCA..................................................................................................................................................................... 23 0 13 0.08 1 0 0 1 0 0 0
..............................................................GTAGATCTCCGCAGTTGTTCGC....................................................................................................................................................................... 22 0 13 0.08 1 0 0 0 1 0 0
..............................................................GTAGGTCTCCGCAGTTGTTCGC....................................................................................................................................................................... 22 1 13 0.08 1 0 0 0 1 0 0
.................................................................GATCTCCGCAGTTGTTCGCCAAAAG................................................................................................................................................................. 25 0 13 0.08 1 1 0 0 0 0 0
.............................................................................TGTTCGCCAAAAGTAAAGATG......................................................................................................................................................... 21 0 14 0.07 1 0 0 1 0 0 0
.....................................................................................AAAAGTAAAGATGTGCAAGCT................................................................................................................................................. 21 0 14 0.07 1 0 1 0 0 0 0
.......................................................................................................................TACTATCGGCACTCAAACATC............................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0
.............................................................TGTAGATCTCCGCAGTTGTTC......................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0
........................................................................................................................ACTATCGGCACTCAAACATC............................................................................................................... 20 0 14 0.07 1 0 0 1 0 0 0
...........................................................................GTTGTTCGCCAAAAGTAAATAT.......................................................................................................................................................... 22 1 14 0.07 1 0 0 1 0 0 0
.................................................................................................................ATCGTTTACTATCGGCACC....................................................................................................................... 19 1 14 0.07 1 0 1 0 0 0 0
...........................................................................GTTGTTCGCCAAAAGTAAAGATG......................................................................................................................................................... 23 0 14 0.07 1 0 0 0 0 0 1
.................................................................................................................ATCGTTTACTATCGGCGCTCA..................................................................................................................... 21 1 14 0.07 1 1 0 0 0 0 0
...............................................................................................................CTATCGTTAACTATCGGCACTCA..................................................................................................................... 23 1 14 0.07 1 1 0 0 0 0 0
...........................................................................................................................................CGATAGTGGTTAGGATACCC............................................................................................ 20 3 15 0.07 1 0 1 0 0 0 0
................................................................................................................................CACTCAAACATCGATAGTGGTTCGC.................................................................................................. 25 0 15 0.07 1 1 0 0 0 0 0
....................................................................................................................................CAAACATCGATAGTGGTTCGCAAACCCA........................................................................................... 28 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................................................AACATCGATAGTGGTTCGC.................................................................................................. 19 0 15 0.07 1 0 1 0 0 0 0
................................................................................................................................................................................ATACTATCGTGAGTGGCCGACCCAG.................................................. 25 0 16 0.06 1 1 0 0 0 0 0
.........................................................................................................................................................................TATATCGATACTATCGTGAGTGGCCG........................................................ 26 0 16 0.06 1 1 0 0 0 0 0
................................................................................................................................................................................ATACTATCGTGAGTGGCCGA....................................................... 20 0 16 0.06 1 1 0 0 0 0 0
....................................................................................................................................................................................TATCGTGAGTGGCCGACCCAGCTCT.............................................. 25 0 16 0.06 1 1 0 0 0 0 0
............................................................................................................................................................................ATCGATACTATCGTGAGTGGC.......................................................... 21 0 16 0.06 1 0 0 0 0 1 0
.......................................................................................................................................................................................CGTGAGTGGCCGACCCAG.................................................. 18 0 16 0.06 1 1 0 0 0 0 0
.................................................................................................................................................................................TACTATCGTGAGTGGCCGACC..................................................... 21 0 16 0.06 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................ACAAGGTTCTGAAGCAGGTT............ 20 0 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................................ATTTACATCTACAAGGTTCTGA.................... 22 0 20 0.05 1 0 0 0 0 1 0
............................................................................................................................................................................................................................CAAGGTTCTGAAGCAGGT............. 18 0 20 0.05 1 0 0 0 0 1 0
.............................................................................................AGATGTGCGATCCTGCCACT.......................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TACATCTACAAGGCTCTGAAGCAG............... 24 1 20 0.05 1 0 0 0 0 1 0
....................................................................................................................................................................................................................TACATCTACAAGGTTCTGAAGCAGGTT............ 27 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................................................................CATCTACAAGGTTCTGAAGCA................ 21 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TACATTTACAAGGTTCTCAAG.................. 21 2 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACC........ 27 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TCTACAAGTTTCTGAAGCAGGTTCACCCT...... 29 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGTTCACCC....... 26 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACCC....... 28 0 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGG.............. 21 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ATTTACATCTACAAGGTT........................ 18 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCA.......... 25 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TTTACATCTACAAGGTTCTGAAGCA................ 25 0 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACCCC...... 29 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................................ATTTACATCTACAAGGTTCTGAAGCA................ 26 0 20 0.05 1 0 0 0 0 0 1
..........................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGTTCACCCT...... 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................ACAAGGTTCTGAAGCAGGTTC........... 21 0 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................................................................GTTCTGAAGCAGGTTCACCC....... 20 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................AAGGTTCTGAAGCAGGTTCACCCT...... 24 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................................GTTCTTAAGCAGGTTCACCCTGA.... 23 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................................GTTCTGAAGCAGGTTCACCCTGACACT 27 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................CGACAAGGTTCTGAAGCAGGTTCACCC....... 27 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................ACCTACAAGGTTCTGAAGCA................ 20 1 20 0.05 1 0 0 1 0 0 0
...................................................................................................................................................................................................................TTACATCTACAAGGTTCTGAAGCAGG.............. 26 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................CATCTACAAGGTTCTGAAG.................. 19 0 20 0.05 1 0 0 1 0 0 0
...................................................................................................................................................................................GTATCGTCAGTGGCGGACCC.................................................... 20 3 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................ACATCTACAAGGTTCTGAAGCAGGTT............ 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................TACATTTACAAGGTTCTCAAGCAGG.............. 25 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGTT............ 21 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................ACAAGGTTCTGAAGCAGGTTCACCCT...... 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................TACATCTACAAGGTTCTGAAGCAGGT............. 26 0 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGT............. 20 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................ACATCTACAAGGTTCTGA.................... 18 0 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

AGCATAAGCGGAACGTTTTTAAACAGGTAAAAGAGGCGGTTGTGGTTATAATTGAAAGTGCACATCTAGAGGCGTCAACAAGCGGTTTTCATTTCTACACGTTCGAACGGTGATAGCAAATGATAGCCGTGAGTTTGTAGCTATCACCAAGCGTTTGGGTTTATAAGCTATATAGCTATGATAGCACTCACCGGCTGGGTCGAGATCGATAAATGTAGATGTTCCAAGACTTCGTCCAAGTGGGACTGTGA
************************************************************************************************************************.........((....................(((...(((((.((((((((....))).)).)))..)))))...)))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V106
head
 V055
head
 V039
embryo
....................AAACAGGTTTAAGAGGCG..................................................................................................................................................................................................................... 18 2 20 0.45 9 0 1 1 4 2 1
...............................AGAGGCGGTTGTGGTTATAA........................................................................................................................................................................................................ 20 0 11 0.27 3 2 1 0 0 0 0
......................ACAGGTAAAAGAGGCGGTTGT................................................................................................................................................................................................................ 21 0 11 0.27 3 2 0 1 0 0 0
..........................GTAAAAGAGGCGGTTGTGGTT............................................................................................................................................................................................................ 21 0 11 0.27 3 2 0 1 0 0 0
................GTTCAAACAGGTTAAAGAGGCG..................................................................................................................................................................................................................... 22 3 13 0.23 3 3 0 0 0 0 0
............................AAAAGAGGCGGTTGTGGTTAT.......................................................................................................................................................................................................... 21 0 11 0.18 2 1 0 0 1 0 0
......................................GTTGTGGTTATAATTGAAAGT................................................................................................................................................................................................ 21 0 11 0.18 2 0 0 0 2 0 0
........CGGAACGTTTTTAAACAGGT............................................................................................................................................................................................................................... 20 0 11 0.18 2 1 0 0 0 1 0
.........................GGTAAAAGAGGCGGTTGTGGTT............................................................................................................................................................................................................ 22 0 11 0.18 2 1 0 1 0 0 0
........CGGAACGTTTTTAAACAGGTA.............................................................................................................................................................................................................................. 21 0 11 0.18 2 0 1 0 1 0 0
..........................................................TGCACATCTAGAGGCGTCAAC............................................................................................................................................................................ 21 0 12 0.17 2 1 0 0 1 0 0
....................AAACAGGTATAAGAGGCGA.................................................................................................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 1 0
.............................AAAGAGGCGGTTGTGGTTATA......................................................................................................................................................................................................... 21 0 11 0.09 1 0 0 1 0 0 0
......AGCGGAACGTTTTTAAACAG................................................................................................................................................................................................................................. 20 0 11 0.09 1 0 0 1 0 0 0
......................ACAGGTAAAAGAGGCGGTTGTGGTTAT.......................................................................................................................................................................................................... 27 0 11 0.09 1 1 0 0 0 0 0
...........................TAAAAGAGGCGGTTGTGGTT............................................................................................................................................................................................................ 20 0 11 0.09 1 0 0 0 1 0 0
...............................TGAGGCGGTTGTGGTTAT.......................................................................................................................................................................................................... 18 1 11 0.09 1 0 0 0 1 0 0
..............................AAGAGGCGGTTGTGGTTATAA........................................................................................................................................................................................................ 21 0 11 0.09 1 1 0 0 0 0 0
........CGGAACGTTTTTAAACAGG................................................................................................................................................................................................................................ 19 0 11 0.09 1 0 1 0 0 0 0
.........................................GTGCTTATAATTGAAAGTGCACATCTAG...................................................................................................................................................................................... 28 1 11 0.09 1 0 0 0 0 0 1
................................GAGGCGGTTGTGGTTATAGTT...................................................................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0
....................................CGGTTGTGGTTATAATTGAAA.................................................................................................................................................................................................. 21 0 11 0.09 1 0 1 0 0 0 0
.GCATAAGCGGAACGTTTTTAA..................................................................................................................................................................................................................................... 21 0 11 0.09 1 0 0 1 0 0 0
.................................AGGCGGTTGTGGTTATAATGG..................................................................................................................................................................................................... 21 1 11 0.09 1 0 1 0 0 0 0
...............................AGAGGCGGTTGTGGTTATA......................................................................................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0
..................................GGCGGTTGTGGTTATAATTG..................................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
............................................................CACATCTAGAGGCGTCAACAAGCGGT..................................................................................................................................................................... 26 0 11 0.09 1 0 1 0 0 0 0
.............................AAAGAGGCGGTTGTGGTTATAATTG..................................................................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0
.........................GGTAAAAGAGGCGGTTGTGGT............................................................................................................................................................................................................. 21 0 11 0.09 1 1 0 0 0 0 0
........................................TGTGGTTATAATTGAAAGTGC.............................................................................................................................................................................................. 21 0 11 0.09 1 0 0 0 1 0 0
......................ACAGGTAAAAGAGGCGGTTGTGGTT............................................................................................................................................................................................................ 25 0 11 0.09 1 0 0 1 0 0 0
....................................................TGAAAGTGCACATCTAGAGGCGTCAA............................................................................................................................................................................. 26 0 11 0.09 1 0 1 0 0 0 0
.............................AAAGAGGCGGTTGTGGTTAT.......................................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
.......GCGGAACGTTTTTAAACAGGTCGA............................................................................................................................................................................................................................ 24 2 11 0.09 1 1 0 0 0 0 0
......................ACAGGTAAAAGAGACGGTTGTG............................................................................................................................................................................................................... 22 1 11 0.09 1 1 0 0 0 0 0
.............................AAAGAGGCGGTTGTGGTTA........................................................................................................................................................................................................... 19 0 11 0.09 1 0 0 1 0 0 0
...............................AGAGGCGGTTGTGGTTATAAT....................................................................................................................................................................................................... 21 0 11 0.09 1 0 0 1 0 0 0
................................GAGGCGGTTGTGGTTATAATT...................................................................................................................................................................................................... 21 0 11 0.09 1 0 0 0 1 0 0
..............................AAGAGGCGGTTGTGGTTAT.......................................................................................................................................................................................................... 19 0 11 0.09 1 0 0 1 0 0 0
.................TTTAAACAGGTAAAAGAGGCG..................................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0
................GTTCAAACAGGTATAAGAGGC...................................................................................................................................................................................................................... 21 3 11 0.09 1 1 0 0 0 0 0
........................AGGTAAGAGAGGCGGTTGT................................................................................................................................................................................................................ 19 1 11 0.09 1 1 0 0 0 0 0
..........................GTAAAAGAGGCGGTCGTGGTT............................................................................................................................................................................................................ 21 1 11 0.09 1 0 0 1 0 0 0
........CGGAACGTTTTTAAACTGGT............................................................................................................................................................................................................................... 20 1 11 0.09 1 0 1 0 0 0 0
............................AAAAGAGGCGGTTGTGGTTAGA......................................................................................................................................................................................................... 22 1 11 0.09 1 0 1 0 0 0 0
...............................AGAGGCGCTTGTGGTTATAATC...................................................................................................................................................................................................... 22 2 11 0.09 1 0 0 0 0 0 1
............................................................CACATCTAGAGGCGTCAACAGG......................................................................................................................................................................... 22 1 12 0.08 1 0 1 0 0 0 0
.........................................................GTCCACGTCTAGAGGCGTCAAC............................................................................................................................................................................ 22 2 12 0.08 1 0 0 0 0 1 0
.......................................................AAGTGCACATCTAGAGGCTTCAACAA.......................................................................................................................................................................... 26 1 12 0.08 1 0 0 1 0 0 0
.....................................................GAAAGTGCACATCTAGAGGCGTCAACA........................................................................................................................................................................... 27 0 12 0.08 1 0 1 0 0 0 0
...........................................................................................................CGGTGCCAGCAAATGATCGC............................................................................................................................ 20 3 12 0.08 1 0 0 0 0 1 0
.....................................GGTTGTGGTTGTAATTGAGA.................................................................................................................................................................................................. 20 2 12 0.08 1 0 0 1 0 0 0
.........................................................GTGCACATCTAGAGGCGTCAAC............................................................................................................................................................................ 22 0 12 0.08 1 1 0 0 0 0 0
...........................................................GCACATCTAGAGGCGTCAAGAA.......................................................................................................................................................................... 22 1 12 0.08 1 0 1 0 0 0 0
...........................................................GCACATCTAGAGGCGTCAACAA.......................................................................................................................................................................... 22 0 12 0.08 1 0 0 1 0 0 0
..........................................................TGCACATCTAGAGGCGTCAA............................................................................................................................................................................. 20 0 12 0.08 1 0 1 0 0 0 0
...........................................................GCACATCTAGAGGCGTCAA............................................................................................................................................................................. 19 0 12 0.08 1 0 0 1 0 0 0
........................................................AGTGCACATCTAGAGGCGTCAA............................................................................................................................................................................. 22 0 12 0.08 1 1 0 0 0 0 0
...........................................................GCACATCTAGAGGCGTCAAC............................................................................................................................................................................ 20 0 12 0.08 1 0 0 0 1 0 0
.......................................................AAGTGCACATCTAGAGGCGTCAACAAG......................................................................................................................................................................... 27 0 12 0.08 1 1 0 0 0 0 0
.....................................................................................................TTCGAACGGCGATAGCAAATG................................................................................................................................. 21 1 13 0.08 1 0 1 0 0 0 0
....................................................................................................GTTCGAACGGTGATAGCAAATGAT............................................................................................................................... 24 0 13 0.08 1 0 1 0 0 0 0
...................................................................AGAGGCGTCAACAAGCGGTTTTT................................................................................................................................................................. 23 1 13 0.08 1 1 0 0 0 0 0
...................................................................AGAGGCGTCAACAAGCGGTT.................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0
...................................................................AGAGGCGTCAACAAGCGG...................................................................................................................................................................... 18 0 13 0.08 1 0 1 0 0 0 0
................CTTCAAACAGGTTAAAGAGGCG..................................................................................................................................................................................................................... 22 3 13 0.08 1 1 0 0 0 0 0
...............................................................TTCTAGAGTCGTCAACAAGCGG...................................................................................................................................................................... 22 2 13 0.08 1 0 0 0 1 0 0
................................................................TCTAGAGGCGTCAACAAGCGGT..................................................................................................................................................................... 22 0 13 0.08 1 0 1 0 0 0 0
.............................................................................................TCTACACGTTCGAACGGTGATAGCAA.................................................................................................................................... 26 0 13 0.08 1 0 1 0 0 0 0
.....................................................................TGGCGTCAACAAGCGGTTTTCAT............................................................................................................................................................... 23 1 13 0.08 1 0 0 1 0 0 0
..............................................................CATCTAGAGGCGTCAACAAGC........................................................................................................................................................................ 21 0 13 0.08 1 1 0 0 0 0 0
..................................................................TAGAGGCGTCAACAAGCGGT..................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0
..................................................................TAGAGGCGTTAACAAGCGG...................................................................................................................................................................... 19 1 13 0.08 1 0 1 0 0 0 0
.............................................................................................................................................................................................ACCGGCTTGGTCGAGCTC............................................ 18 2 13 0.08 1 0 0 0 0 1 0
..................................................................TAGAGGCGTCAACAAGCGGTT.................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0
.................................................................................................CACGTTCGAACGGTGATATC...................................................................................................................................... 20 1 13 0.08 1 0 1 0 0 0 0
...............................................................ATCTAGAGGCGTCAACAAG......................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0
...............................................................ATCTAGAGGCGTCAACAA.......................................................................................................................................................................... 18 0 14 0.07 1 0 0 0 0 1 0
..................TCAAACAGGTTAAAGAGGCG..................................................................................................................................................................................................................... 20 2 14 0.07 1 0 0 1 0 0 0
........................................................................................................................................GTAGCTATCACCAAGCGTTT............................................................................................... 20 0 15 0.07 1 0 1 0 0 0 0
..............................................................................................................................CCGTGAGTTTGTAGCTATCA......................................................................................................... 20 0 15 0.07 1 1 0 0 0 0 0
................TTTCAAACAGGTTTAAGAGGCG..................................................................................................................................................................................................................... 22 3 15 0.07 1 1 0 0 0 0 0
..............................................................................................................................CCGTGAGTTTGTAGCTATCAC........................................................................................................ 21 0 15 0.07 1 0 0 0 0 0 1
..................................................................................................................................GAGTTTGTAGCTATCACCAAGCTTTT............................................................................................... 26 1 15 0.07 1 0 1 0 0 0 0
........................................................................................................................................GTAGCTATCACCAAGCGTTTG.............................................................................................. 21 0 15 0.07 1 1 0 0 0 0 0
...............................................................................................................................CGTGAATTTGGAGCTATCACTA...................................................................................................... 22 3 15 0.07 1 0 0 1 0 0 0
..................TTAAACAGGTTTAAGAGGC...................................................................................................................................................................................................................... 19 2 16 0.06 1 0 0 0 1 0 0
...........................................................................................................................................................TGGGTTTATAAGCTATATTG............................................................................ 20 1 16 0.06 1 0 1 0 0 0 0
...........................................................GCACATCTGGAGGCGTCGG............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0
......................................................................................................................................................................................................................GTAGATGTTCCAAGACTTCGTCCA............. 24 0 20 0.05 1 0 0 0 0 0 1
................................................................................................................................................................................................................ATAAATGTAGATGATACAA........................ 19 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_8577:3701-3951 + dan_3403 TCGTATTCGCCTTGCAAAAATTTGTCCATTTT-----------------CTCCGCCAACACCAATAT---TAACTT-TCACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTTGTTCGCCAAAAGTAAAG------ATG----------TGCAA-----------GC--------------------------------T---TGCCACTATCGTTTACTATCG----------GCACTCAAACATCGATAGTGGTTCGCAAACCCAAATATTCGATAT---ATCGATACTATCGTGAGTGGCCGACCCAGCTCTAGCTATTTACATCTACAAGGTTCTGAAGCAGGTTCACCCTGACACT---
droBip1 scf7180000393189:4221-4415 - TCGTTTTCGCATTGCAAAAATTTGTCCATTTT-----------------CTCCGCCAACACCAATAT---TAACCT-CCACGT--------G--------------------------------------------------------------------TTATTTGCCAAATGTAAG----------A----------ACTTT-----TTTTAAT--------------------------------T---TTCCACTATCGTTAACTATCG----------GGACTAAAACATCGATGGTGGTTCGCAGCCGCAAATATTCGATGT---ATCGATACTATCGTGAGTGGTCGACCCAGCTCTA------------------------------------------------
droKik1 scf7180000302682:90546-90651 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTTAATATCG----------AGACCTAATACTCGATAGTGGCTACCAAGACCAAATATTCGATAT---ATCGATACTATCGTGAGTGGTCAACCCAGCTCTAGTCGTT-----------------------------------CACTTCT
droFic1 scf7180000453907:38602-38813 - TCGCTTCCGCCTTGTAAAAATTTTTCCATTTT-----------------CTCCGCCAACACCAATAT---TACCAT-CCACGT--------GT-----------------------------------------------------------------AGTTGTTCGCCAAAAGTAAAG------ATG----------TGCAAACTTTTTTTTCAC--------------------------------T---TGCAACTATCGTTTACCATCG----------ACACTGA-ATATCGATATTGGTTCGGAAACCCAAATACTCGATAT---ATCGAAAATAATTTGAGTGGTCGACCCAGCTCTAGTTCTT------------------------------------------
droEle1 scf7180000490675:130224-130409 + CTG----------GCAATATTTTTTCCATTTT-----T-----------GACCGCCAACACAAATAA---TTTGCC-ATACGAAAACTCGTATTTCT---------------------------------------------------------------------------ATTATC----------AAATTGTAGT---------------AAT--------------------------------G---TACCACTATCGTTTACTATCG----------AAACTAAAACCTCGATAGTGCTTCG-AAGCCCAAATATATTCTCT---ATCGATACTATCGTAAGTGGCTGACCCAGCTCTA------------------------------------------------
droRho1 scf7180000766545:35779-35953 - ATGC----GCCTTGCAAGAATCTTTCCATTTT----------------AGTCCGCCAACACCAATAA---TTTTCC-AAATGAGAATTCTTGTTTCT---------------------------------------------------------------------------------------------------------------------AT--------------------------------T---TTCCACTATCGTTTGCTATCG----------AAACGAAAACCTAGATAGTGTTTCT-AAGCCCAAAAATTCGATAT---ATCGATTTTATAGTAAATGGCCGACTCAGCTCTA------------------------------------------------
droBia1 scf7180000302193:5747439-5747545 - AGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAACCGATTACTATCG----------AAGCTAGAGCGCCGATAGACCTGCGCACCCTCAAGAATTCGATGA---ACCGATACTATCGCCAGTGGTTATCCCAGCTCTAATT---------------------------------------------
droTak1 scf7180000411452:2549-2750 - TTG-----------CAAAATTTTCGTTACTTC-----T--TACTT---ACCCTGCCAACACAAATAA---ACACTC-AAACGAGG-CAC-------------------------------------------------------------------GCTTTTAATCGCCAAATTTAGTG------ATA----------TACAAT-----TTTTAAT-------------------GAGT---------T---TACCACAATCGTTTACCTTCG----------AATTTAAAACCTCGATAGTGATTCT-AAACCAAAATATTTGATAT---ATCGATTCTATTATGAGTGGCCCACCCAGC----------------------------------------------------
droEug1 scf7180000409562:64145-64241 - C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATCGTTTACTATCG----------AAACTAAAGCTTCGCCAGTGTATCGCAAACACAAATATTCGGTGT---ATCGATACTATCGTGAGTGGT---ACCCGCTCTAATT---------------------------------------------
dm3 chr3L:1350556-1350671 - AATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTG------ATG----------TACAAT-------------------------------------------------CGAACTATCACTCGGTATCG----------CACTGCAAATACCGATAGTATTTCGCAAGCTCAAATATTCGATAC---ATCGACACTGTCGTGAGTTGT----CCAGCTCTAGTT---------------------------------------------
droSim2 3l:1274038-1274132 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCACTTGGTATCG----------CACTGCATATACCGATAGTATTTTGCAAGCTCAAATATTCGATAC---ATCGAGACTGTCGAGAGTTGT----CCAGCTCTAGTT---------------------------------------------
droSec2 scaffold_2:1393153-1393247 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCACTTGGTATCG----------CACTGCATATACCGATAGTATTTTGCAAGCTCAAATATTCGATAC---ATCGAGACTGTCGAGAGTTGT----CCAGCTCTAGTT---------------------------------------------
droYak3 3R:6834151-6834345 + ACACTTGCACTTCCGACAAATTTATCCATGTTATTTTT-------GAAACGCCGCCAACACCACTTT---TTGGCC-AA-------------------------------------------------------------------------CGCCAACGTTTTGCGCCAAAATTAAG----------AAAATGTGGT---------------GA-------------------------------------TAAC----------ACTATCG----------TAATCAAATATTCGATAGTGGCTTGAAA-AGTAAATATTCAATAT---ATCGATACTATCGTGAGTGGTCGCCCCAGCTCTA------------------------------------------------
droEre2 scaffold_4770:5799130-5799267 + GTTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAACTAGCG------ATG----------AACGCA-----TCTTAAA--------------------------------G---CGTCAAGCTCGGCTACTATCG----------ATACCAAAGCATCAATGGGGCTTCGCGTACCGAAACGTTCGATATAAGATCGATTACATCGCGGATGGGCAACCCAGCTCTAG-----------------------------------------------
dp5 XL_group1e:10091990-10092034 + GCCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATCTACAAAGTTCTTAAGCAAGTCCACCCGGACACT---
droPer2 scaffold_83:76532-76769 + AA---------------TAATTTGTCCATATT-----TGGAAAATAAAATGCCATTAACACCAATAT---ACAAAT-GCAATT--------GTATCT-----------------------------------------------------------------ATGCAA------------------------------TACAAATGTTTGTGACAAATGCAAATCAAATAGTGGTGTGATCAAAAAATGTTTGAGCACTATCGCTTACTATCGAATCAAATCGAAATAAAAAAATCGATAGTGCATATCTCTCACAAAAATTCGATGT---CTCGATAGTGTAGTGAGTGGTCGACCCAGCTCTAACT---------------------------------------------
droWil2 scf2_1100000004943:3412321-3412593 - AG---------------AAATTTGTCCATCCT-----T----------CCGCCACCAACACCAACGAAAATTTACCTACAAATAAACACTTATTTTAATATTTAATTACCTTTTACATATAAATGTATTTCTTACCAAAATTTGCTGCCGACCTGCAAAG--TTGCGCCAAAACAAGTAATGCGC---AATGTATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------AACAATAACCATCGATAGCGACGCAAAAATATGAAAATTCGATAT---ATCGATAGTGCCATTGATAGTTT-TACAGCTCTAGTTTAT-----------------------------------ATATATA
droVir3 scaffold_2123:1267-1311 + GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGCAGGTCCACCCTGACACC---
droMoj3 scaffold_90:2639-2683 - GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTACAAAGTGCTAAAGCAGGTCCATCCTGACACT---
droGri2 scaffold_2164:292-336 + GCCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGTTGAAGCAGGTCCATCCTGACACT---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TCGTATTCGCCTTGCAAAAATTTGTCCATTTT-----------------CTCCGCCAACACCAATAT---TAACTT-TCACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTTGTTCGCCAAAAGTAAAG------ATG----------TGCAA-----------GC--------------------------------T---TGCCACTATCGTTTACTATCG----------GCACTCAAACATCGATAGTGGTTCGCAAACCCAAATATTCGATAT---ATCGATACTATCGTGAGTGGCCGACCCAGCTCTAGCTATTTACATCTACAAGGTTCTGAAGCAGGTTCACCCTGACACT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................AAAATTTGTCCATTTT-----------------CTCCG.......................................................................................................................................................................................................................................................................................................................................................................21110.273300000
.......................................................................AACTT-TCACGT--------GT---------------------------AGAT----------------------------CTCC.................................................................................................................................................................................................................................................................21110.273120000
...............................................................................ACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTTGTTCG......................................................................................................................................................................................................................................................25110.273000003
...............................................................................ACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTTG..........................................................................................................................................................................................................................................................21120.253200010
........................................................................................................................AGAT----------------------------CTCCGCAGTTGTTCGCC....................................................................................................................................................................................................................................................21130.233300000
.................AAATTTGTCCATTTT-----------------CTCCGCCAACAC................................................................................................................................................................................................................................................................................................................................................................27110.182020000
...................ATTTGTCCATTTT-----------------CTCCGCCA....................................................................................................................................................................................................................................................................................................................................................................21110.182200000
...............................................................................ACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTT...........................................................................................................................................................................................................................................................20120.172200000
.......................................................................................................................................................................................................................C--------------------------------T---TGCCACTATCGTTTACTATCG----------GCAC..............................................................................................................................27120.172200000
...............................................................................................................................................................................................................................................................CACTATCGTTTACTATCG----------GCA...............................................................................................................................21140.142200000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACCCT.........29200.102020000
........................................................................................................................................................................................................................................................................................................................................................................................CTACAAGGTTCTGAAGCAG..................19200.102000011
........................................................................................................................................................................................................................................................................................................................................................................................CTACAAGGTTCTGAAGCAGGTT...............22200.102010010
................AAAATTTGTCCATTTT-----------------CTCC........................................................................................................................................................................................................................................................................................................................................................................20110.091010000
..........CTTGCAAAAATTTGTCCATTT..............................................................................................................................................................................................................................................................................................................................................................................................21110.091010000
.......CGCCTTGCAAAAATTTGTCC..................................................................................................................................................................................................................................................................................................................................................................................................20110.091010000
.................AAATTTGTCCATTTT-----------------CTCCGC......................................................................................................................................................................................................................................................................................................................................................................21110.091100000
.......................GTCCATTTT-----------------CTCCGCCAACACC...............................................................................................................................................................................................................................................................................................................................................................22110.091100000
...........................ATTTT-----------------CTCCGCCAACACC...............................................................................................................................................................................................................................................................................................................................................................18110.091010000
..................AATTTGTCCATTTT-----------------CTCCGCC.....................................................................................................................................................................................................................................................................................................................................................................21110.091010000
........................................................................ACTT-TCACGT--------GT---------------------------AGAT----------------------------CTCC.................................................................................................................................................................................................................................................................20110.091100000
..............................................................................CACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTTGTTCGCC....................................................................................................................................................................................................................................................28110.091000001
..................................................................T---TAACTT-TCACGT--------GT---------------------------AGAT----------------------------C....................................................................................................................................................................................................................................................................20110.091100000
..................AATTTGTCCATTTT-----------------CTCCGC......................................................................................................................................................................................................................................................................................................................................................................20110.091100000
.........CCTTGCAAAAATTTGTCCATT...............................................................................................................................................................................................................................................................................................................................................................................................21110.091100000
....................TTTGTCCATTTT-----------------CTCCGCCAACACC...............................................................................................................................................................................................................................................................................................................................................................25110.091010000
.........................................................................CTT-TCACGT--------GT---------------------------AGAT----------------------------CTCCGCT..............................................................................................................................................................................................................................................................22120.081100000
...............................................................................ACGT--------GT---------------------------AGAT----------------------------CTCCGCAGTTGT.........................................................................................................................................................................................................................................................22120.081000010
..........................................................................................................................................................................AAAGTAAAG------ATG----------TGCAA-----------GC--------------------------------T---TGCCACT..........................................................................................................................................................27120.081000010
..........................................................................TT-TCACGT--------GT---------------------------AGAT----------------------------CTCCGCA..............................................................................................................................................................................................................................................................21120.081100000
............................................................................................................................................................................................................................................................TGCCACTATCGTTTACTATCG----------GCACC.............................................................................................................................26120.081010000
..................................................................................T--------GT---------------------------AGAT----------------------------CTCCGCAGTTGTTCGCCAAAAG...............................................................................................................................................................................................................................................29130.081100000
............................................................................................T---------------------------AGAT----------------------------CTCCGCAGTTGTTCGC.....................................................................................................................................................................................................................................................21130.081100000
...........................................................................................................................T----------------------------CTCCGCAGTTGTTCGCCAAAAGT..............................................................................................................................................................................................................................................24130.081000001
............................................................................................T---------------------------AGAT----------------------------CTCCGCAGTTGTTCGCCA...................................................................................................................................................................................................................................................23130.081000001
...........................................................................................GT---------------------------AGAT----------------------------CTCCGCAGTTGTTCGC.....................................................................................................................................................................................................................................................22130.081000010
.........................................................................................................................GAT----------------------------CTCCGCAGTTGTTCGCCAAAAG...............................................................................................................................................................................................................................................25130.081100000
.................................................................................................................................................................TGTTCGCCAAAAGTAAAG------ATG----------.......................................................................................................................................................................................................................21140.071000001
.........................................................................................................................................................................AAAAGTAAAG------ATG----------TGCAA-----------GC--------------------------------T---.................................................................................................................................................................21140.071010000
.........................................................................................................................................................................................................................................................................TACTATCG----------GCACTCAAACATC.....................................................................................................................21140.071100000
..................................................................................T--------GT---------------------------AGAT----------------------------CTCCGCAGTTGTTC.......................................................................................................................................................................................................................................................21140.071100000
..........................................................................................................................................................................................................................................................................ACTATCG----------GCACTCAAACATC.....................................................................................................................20140.071000001
...................................................................................................................................................................................................................................................................ATCGTTTACTATCG----------GCACC.............................................................................................................................19140.071010000
...............................................................................................................................................................GTTGTTCGCCAAAAGTAAAG------ATG----------.......................................................................................................................................................................................................................23140.071000100
............................................................................................................................................................................................................................................................................................CACTCAAACATCGATAGTGGTTCGC........................................................................................................25150.071100000
................................................................................................................................................................................................................................................................................................CAAACATCGATAGTGGTTCGCAAACCCA.................................................................................................28150.071100000
..................................................................................................................................................................................................................................................................................................AACATCGATAGTGGTTCGC........................................................................................................19150.071010000
...............................................................................................................................................................................................................................................................................................................................................ATACTATCGTGAGTGGCCGACCCAG.....................................................25160.061100000
.....................................................................................................................................................................................................................................................................................................................................TAT---ATCGATACTATCGTGAGTGGCCG...........................................................26160.061100000
...............................................................................................................................................................................................................................................................................................................................................ATACTATCGTGAGTGGCCGA..........................................................20160.061100000
...................................................................................................................................................................................................................................................................................................................................................TATCGTGAGTGGCCGACCCAGCTCT.................................................25160.061100000
...........................................................................................................................................................................................................................................................................................................................................ATCGATACTATCGTGAGTGGC.............................................................21160.061001000
......................................................................................................................................................................................................................................................................................................................................................CGTGAGTGGCCGACCCAG.....................................................18160.061100000
................................................................................................................................................................................................................................................................................................................................................TACTATCGTGAGTGGCCGACC........................................................21160.061010000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAGGTTCTGAAGCAGGTT...............20200.051000001
................................................................................................................................................................................................................................................................................................................................................................................ATTTACATCTACAAGGTTCTGA.......................22200.051001000
...........................................................................................................................................................................................................................................................................................................................................................................................CAAGGTTCTGAAGCAGGT................18200.051001000
...................................................................................................................................................................................................................................................................................................................................................................................TACATCTACAAGGTTCTGAAGCAGGTT...............27200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................CATCTACAAGGTTCTGAAGCA...................21200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACC...........27200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGTTCACCC..........26200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACCC..........28200.051000001
.......................................................................................................................................................................................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGG.................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................ATTTACATCTACAAGGTT...........................18200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCA.............25200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................TTTACATCTACAAGGTTCTGAAGCA...................25200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTACAAGGTTCTGAAGCAGGTTCACCCC.........29200.051010000
................................................................................................................................................................................................................................................................................................................................................................................ATTTACATCTACAAGGTTCTGAAGCA...................26200.051000100
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGTTCACCCT.........27200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAGGTTCTGAAGCAGGTTC..............21200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCTGAAGCAGGTTCACCC..........20200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................AAGGTTCTGAAGCAGGTTCACCCT.........24200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCTGAAGCAGGTTCACCCTGACACT---27200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................TTACATCTACAAGGTTCTGAAGCAGG.................26200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................CATCTACAAGGTTCTGAAG.....................19200.051000001
....................................................................................................................................................................................................................................................................................................................................................................................ACATCTACAAGGTTCTGAAGCAGGTT...............26200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGTT...............21200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAGGTTCTGAAGCAGGTTCACCCT.........26200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................TACATCTACAAGGTTCTGAAGCAGGT................26200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTTCTGAAGCAGGT................20200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................ACATCTACAAGGTTCTGA.......................18200.051010000
droBip1
TCGTTTTCGCATTGCAAAAATTTGTCCATTTT-----------------CTCCGCCAACACCAATAT---TAACCT-CCACGT--------G--------------------------------------------------------------------TTATTTGCCAAATGTAAG----------A----------ACTTT-----TTTTAAT--------------------------------T---TTCCACTATCGTTAACTATCG----------GGACTAAAACATCGATGGTGGTTCGCAGCCGCAAATATTCGATGT---ATCGATACTATCGTGAGTGGTCGACCCAGCTCTA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTTAATATCG----------AGACCTAATACTCGATAGTGGCTACCAAGACCAAATATTCGATAT---ATCGATACTATCGTGAGTGGTCAACCCAGCTCTAGTCGTT-----------------------------------CACTTCTSizeHit CountTotal NormTotal
No Reads
droFic1
TCGCTTCCGCCTTGTAAAAATTTTTCCATTTT-----------------CTCCGCCAACACCAATAT---TACCAT-CCACGT--------GT-----------------------------------------------------------------AGTTGTTCGCCAAAAGTAAAG------ATG----------TGCAAACTTTTTTTTCAC--------------------------------T---TGCAACTATCGTTTACCATCG----------ACACTGA-ATATCGATATTGGTTCGGAAACCCAAATACTCGATAT---ATCGAAAATAATTTGAGTGGTCGACCCAGCTCTAGTTCTT------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTG----------GCAATATTTTTTCCATTTT-----T-----------GACCGCCAACACAAATAA---TTTGCC-ATACGAAAACTCGTATTTCT---------------------------------------------------------------------------ATTATC----------AAATTGTAGT---------------AAT--------------------------------G---TACCACTATCGTTTACTATCG----------AAACTAAAACCTCGATAGTGCTTCG-AAGCCCAAATATATTCTCT---ATCGATACTATCGTAAGTGGCTGACCCAGCTCTA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATGC----GCCTTGCAAGAATCTTTCCATTTT----------------AGTCCGCCAACACCAATAA---TTTTCC-AAATGAGAATTCTTGTTTCT---------------------------------------------------------------------------------------------------------------------AT--------------------------------T---TTCCACTATCGTTTGCTATCG----------AAACGAAAACCTAGATAGTGTTTCT-AAGCCCAAAAATTCGATAT---ATCGATTTTATAGTAAATGGCCGACTCAGCTCTA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAACCGATTACTATCG----------AAGCTAGAGCGCCGATAGACCTGCGCACCCTCAAGAATTCGATGA---ACCGATACTATCGCCAGTGGTTATCCCAGCTCTAATT---------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTG-----------CAAAATTTTCGTTACTTC-----T--TACTT---ACCCTGCCAACACAAATAA---ACACTC-AAACGAGG-CAC-------------------------------------------------------------------GCTTTTAATCGCCAAATTTAGTG------ATA----------TACAAT-----TTTTAAT-------------------GAGT---------T---TACCACAATCGTTTACCTTCG----------AATTTAAAACCTCGATAGTGATTCT-AAACCAAAATATTTGATAT---ATCGATTCTATTATGAGTGGCCCACCCAGC----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATCGTTTACTATCG----------AAACTAAAGCTTCGCCAGTGTATCGCAAACACAAATATTCGGTGT---ATCGATACTATCGTGAGTGGT---ACCCGCTCTAATT---------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTG------ATG----------TACAAT-------------------------------------------------CGAACTATCACTCGGTATCG----------CACTGCAAATACCGATAGTATTTCGCAAGCTCAAATATTCGATAC---ATCGACACTGTCGTGAGTTGT----CCAGCTCTAGTT---------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................ATCGACACTGTCGTGAGTTGT----CCAGC....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CACTGTCGTGAGTTGT----CCAGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TTCGATAC---ATCGACACTGTCG.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ATCGACACTGTCGTGAGTTG..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GATAC---ATCGACACTGTCGTGAGTTGT----C........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGTCGTGAGTTGT----CCAGCTCTAGT..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATTCGATAC---ATCGACACTGTCG.....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TATCACTCGGTATCG----------CACT..............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ACTGTCGTGAGTTGT----CCAGCTCT.................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ACTGTCGTGAGTTGT----CCAG.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCACTTGGTATCG----------CACTGCATATACCGATAGTATTTTGCAAGCTCAAATATTCGATAC---ATCGAGACTGTCGAGAGTTGT----CCAGCTCTAGTT---------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................AGACTGTCGAGAGTTGT----CCAGCG...................................................2311.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................AGACTGTCGAGAGTTGT----CCAGCC...................................................2311.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................AC---ATCGAGACTGTCGAGAGTTGT----C........................................................2411.00110000000000000000
droSec2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCACTTGGTATCG----------CACTGCATATACCGATAGTATTTTGCAAGCTCAAATATTCGATAC---ATCGAGACTGTCGAGAGTTGT----CCAGCTCTAGTT---------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................TGTCGAGAGTTGT----CCAGCTC..................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................................ATTCGATAC---ATCGAGACTGT.......................................................................2011.0010010
droYak3
ACACTTGCACTTCCGACAAATTTATCCATGTTATTTTT-------GAAACGCCGCCAACACCACTTT---TTGGCC-AA-------------------------------------------------------------------------CGCCAACGTTTTGCGCCAAAATTAAG----------AAAATGTGGT---------------GA-------------------------------------TAAC----------ACTATCG----------TAATCAAATATTCGATAGTGGCTTGAAA-AGTAAATATTCAATAT---ATCGATACTATCGTGAGTGGTCGCCCCAGCTCTA------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................TGTTATTTTT-------GAAACGCCGCCAAC..................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
............................................................................................................................................................................................................................................................TAAC----------ACTATCG----------TAATCAAATATTCGA...................................................................................................................2612.00202000000000
........................TCCATGTTATTTTT-------GAAACGCCGCCAACA.................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000
...........................................................................................................................................................................................................................................................................................TAATCAAATATTCGATAGTGGCTTG.........................................................................................................2511.00101000000000
..........................................................CACCACTTT---TTGGCC-AA-------------------------------------------------------------------------CGCCAACG.............................................................................................................................................................................................................................................................2511.00101000000000
............................TGTTATTTTT-------GAAACGCCGCCAACACCA..............................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...............................................AACGCCGCCAACACCACTTT---TTGGCC-................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..............................................................................................................................................................................................................................................................................................TCAAATATTCGATAGTGGCTTGAAA-AG...................................................................................................2711.00101000000000
.....................................T-------GAAACGCCGCCAACACCACTTT---TTGG...................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..............................................................................................................................................................................................................................................................................TCG----------TAATCAAATATTCGATAGTGG.............................................................................................................2411.00101000000000
.......................ATCCATGTTATTTTT-------GAAACGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................................................AACACCACTTT---TTGGCC-AA-------------------------------------------------------------------------CGCCAACGT............................................................................................................................................................................................................................................................2811.00100000010000
......................TATCCATGTTATTTTT-------GAAACGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
........................TCCATGTTATTTTT-------GAAACGCCGCC.....................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................TGTTATTTTT-------GAAACGCCGCCAACA.................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...........TCCGACAAATTTATCCATGTTATTTT........................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................TCCATGTTATTTTT-------GAAACGCCGCCAA...................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.....TGCACTTCCGACAAATTTATCCATGTT.............................................................................................................................................................................................................................................................................................................................................................................................2721.00201100000000
..................................................................................................................................................................................................................................................................................................................................CAATAT---ATCGATACTATCGTGAGTGG..............................................................2630.67202000000000
..................................................................................................................................................................................................................................................................................................................................CAATAT---ATCGATACTATCGTGAGTGGT.............................................................2730.67202000000000
.....................................................................................................................................................................................................................................................................................................................................TAT---ATCGATACTATCGTGAGTGGTC............................................................2530.67200010010000
................................................................................................................................................................TTTTGCGCCAAAATTAAG----------AAAATGTG.........................................................................................................................................................................................................................2620.50101000000000
..........................................................................................................................................................................................................................................................................................................................TAAATATTCAATAT---ATCGATACTATCGTG...................................................................2930.33101000000000
.......................................................................................................................................................................................................................................................................................................................................T---ATCGATACTATCGTGAGTGGTCGCCC........................................................2730.33101000000000
.......................................................................................................................................................................................................................................................................................................................................T---ATCGATACTATCGTGAGTGGTCGCC.........................................................2630.33100100000000
.............................................................................................................................................................................TTAAG----------AAAATGTGGT---------------GA-------------------------------------TAAC----------ACTA...............................................................................................................................................2530.33101000000000
....................................................................................................................................................................................................................................................................................................................................ATAT---ATCGATACTATCGTGAGTGGTC............................................................2630.33101000000000
.....................................................................................................................................................................................................................................................................................................................................TAT---ATCGATACTATCGTGAGTGGTCG...........................................................2630.33101000000000
...................................................................................................................................................................................................................................................................................................................................AATAT---ATCGATACTATCGTGAGT................................................................2330.33101000000000
................................................................................................................................................................................................................................................................................................................................................TACTATCGTGAGTGGTCGCCCCA......................................................2330.33101000000000
droEre2
GTTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAACTAGCG------ATG----------AACGCA-----TCTTAAA--------------------------------G---CGTCAAGCTCGGCTACTATCG----------ATACCAAAGCATCAATGGGGCTTCGCGTACCGAAACGTTCGATATAAGATCGATTACATCGCGGATGGGCAACCCAGCTCTAG-----------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................CCGAAACGTTCGATATAAGATCGAT............................................................................2511.0010000010
dp5
GCCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATCTACAAAGTTCTTAAGCAAGTCCACCCGGACACT---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................TATCTACAAAGTTCTTAAGCAAGTCC..............2620.5010010000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCTTAAGCAAGTCCACCCGGACACT---2520.5010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTAAGCAAGTCCACCCGGACAC....2220.5010100000000
droPer2
AA---------------TAATTTGTCCATATT-----TGGAAAATAAAATGCCATTAACACCAATAT---ACAAAT-GCAATT--------GTATCT-----------------------------------------------------------------ATGCAA------------------------------TACAAATGTTTGTGACAAATGCAAATCAAATAGTGGTGTGATCAAAAAATGTTTGAGCACTATCGCTTACTATCGAATCAAATCGAAATAAAAAAATCGATAGTGCATATCTCTCACAAAAATTCGATGT---CTCGATAGTGTAGTGAGTGGTCGACCCAGCTCTAACT---------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................AAAATGTTTGAGCACTATCGC.....................................................................................................................................................2160.332020000
........................................AAAATAAAATGCCATTAACAC................................................................................................................................................................................................................................................................................................................................................................2160.171010000
............................................................................................................................................................................................................TGTTTGTGACAAATGCAAATCAAATAG......................................................................................................................................................................................2760.171010000
............................TATT-----TGGAAAATAAAATGC.........................................................................................................................................................................................................................................................................................................................................................................1960.171010000
.......................................................................................................................................................................................................................................................TGTTTGAGCACTATCGCT....................................................................................................................................................1860.171010000
........................................................................................................................................................................................................................................................................TTACTATCGAATCAAATCGA.................................................................................................................................2060.171001000
..........................................................................................................................................................................................................................................TGTGATCAAAAAATGTTTGA...............................................................................................................................................................2060.171010000
............................................................................................................................................................................................................TGTTTGTGACAAATGCAAATC............................................................................................................................................................................................2160.171010000
.......................................................................................................................................................................................................................................................TGTTTGAGCACTATCGCTTACTATCGAA..........................................................................................................................................2860.171010000
.............................................................................................................................................................................................................................................................AGCACTATCGCTTACTATCGAA..........................................................................................................................................2260.171010000
...............................................................................................................................................................................................................................................TCAAAAAATGTTTGAGCACTATCGCTT...................................................................................................................................................2760.171010000
.........................................................................................................................................................................................................................................................TTTGAGCACTATCGCTTAC.................................................................................................................................................1960.171010000
...........................................................................................................................................................................................................................................................TGAGCACTATCGCTTACTATC.............................................................................................................................................2160.171001000
droWil2
AG---------------AAATTTGTCCATCCT-----T----------CCGCCACCAACACCAACGAAAATTTACCTACAAATAAACACTTATTTTAATATTTAATTACCTTTTACATATAAATGTATTTCTTACCAAAATTTGCTGCCGACCTGCAAAG--TTGCGCCAAAACAAGTAATGCGC---AATGTATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------AACAATAACCATCGATAGCGACGCAAAAATATGAAAATTCGATAT---ATCGATAGTGCCATTGATAGTTT-TACAGCTCTAGTTTAT-----------------------------------ATATATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................TGTATGGT---------------AA-------------------------------------TGCCACTATCGATA----G..............................................................................................................................................2535.0015011040
...............................................................................................................................................................................................................................................................................TG----------AACAATAACCATCGATAGCGACGCA.........................................................................................................2734.331309040
.............................................................................................................................TATTTCTTACCAAAATTTGCTGCCGACC....................................................................................................................................................................................................................................................................2813.00303000
................................................................................................................................................................................................TATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------A.................................................................................................................................2633.00901080
................................................................................................................................TTCTTACCAAAATTTGCTGCCGACC....................................................................................................................................................................................................................................................................2512.00202000
................................................................................................................................................................................................................................................................................................TAACCATCGATAGCGACGCAAAAATA...................................................................................................2642.00807010
.........................................................................................................................................................................................................................................................................................................................................................TGATAGTTT-TACAGCTCTAGTTTAT-----------------------------------A......2612.00201010
...............................................................................................................................................................................................................................................................................TG----------AACAATAACCATCGATAGCGACGC..........................................................................................................2632.00606000
.............................................................................................................................TATTTCTTACCAAAATTTGCTGCCGA......................................................................................................................................................................................................................................................................2612.00202000
........................................................................................................................................................................................................................................................................TA----GTG----------AACAATAACCATCGATAGCGA.............................................................................................................2631.67505000
....................................................................................................................................TACCAAAATTTGCTGCCGACCTGC.................................................................................................................................................................................................................................................................2411.00101000
.......................................................................................................................................................................................GC---AATGTATGGT---------------AA-------------------------------------TGCCACTATCGA.....................................................................................................................................................2631.00303000
................................................................................................................................TTCTTACCAAAATTTGCTGCCGAC.....................................................................................................................................................................................................................................................................2411.00101000
....................................................................................................................................TACCAAAATTTGCTGCCGACCTGCA................................................................................................................................................................................................................................................................2511.00101000
...................................................................................................................................TTACCAAAATTTGCTGCCGACCTGC.................................................................................................................................................................................................................................................................2511.00101000
................................................................................................................................TTCTTACCAAAATTTGCTGCCGACCTGC.................................................................................................................................................................................................................................................................2811.00101000
.........................................................................................................................................................TGCAAAG--TTGCGCCAAAACAAGTAATG.......................................................................................................................................................................................................................................2711.00101000
.........................................................................................................................................................TGCAAAG--TTGCGCCAAAACAAGTAA.........................................................................................................................................................................................................................................2511.00101000
...........................................................................................................................................................................AACAAGTAATGCGC---AATGTATGGT---------------A.......................................................................................................................................................................................................2521.00201010
.................................................................................................................................TCTTACCAAAATTTGCTGCCGACCTG..................................................................................................................................................................................................................................................................2611.00100010
...................................................................................................ATTTAATTACCTTTTACATATAAATG................................................................................................................................................................................................................................................................................................2611.00101000
.....................................................................................................TTAATTACCTTTTACATATAAATGTAT.............................................................................................................................................................................................................................................................................................2711.00101000
.............................................................................................................................TATTTCTTACCAAAATTTGCTGCCGAC.....................................................................................................................................................................................................................................................................2711.00101000
....................................................................................................................................TACCAAAATTTGCTGCCGACCTGCAAAG--...........................................................................................................................................................................................................................................................2811.00101000
.........................................................................................................................................................TGCAAAG--TTGCGCCAAAACAAGTAATGC......................................................................................................................................................................................................................................2811.00101000
.............................................................................................................................................................AAG--TTGCGCCAAAACAAGTAATGCG.....................................................................................................................................................................................................................................2511.00100010
.....................TTGTCCATCCT-----T----------CCGCCACCAACAC................................................................................................................................................................................................................................................................................................................................................................2530.67202000
......................TGTCCATCCT-----T----------CCGCCACCAACACCAAC............................................................................................................................................................................................................................................................................................................................................................2830.67202000
................................................................................................................................................................................................TATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------AAC...............................................................................................................................2830.67200020
.....................................T----------CCGCCACCAACACCAACGAAAATT.....................................................................................................................................................................................................................................................................................................................................................2530.67202000
...............................T-----T----------CCGCCACCAACACCAACGAAAATT.....................................................................................................................................................................................................................................................................................................................................................2630.67202000
.......................................................................TTACCTACAAATAAACACTTATTTTAA...........................................................................................................................................................................................................................................................................................................................2730.67202000
...............................................................................................................................................................................................................................................................................TG----------AACAATAACCATCGATAGCGACGCAA........................................................................................................2830.67202000
......................TGTCCATCCT-----T----------CCGCCACCAACACCAACG...........................................................................................................................................................................................................................................................................................................................................................2930.67202000
.....................................T----------CCGCCACCAACACCAACGAAAATTTACC.................................................................................................................................................................................................................................................................................................................................................2930.67202000
.....................TTGTCCATCCT-----T----------CCGCCACCAACACC...............................................................................................................................................................................................................................................................................................................................................................2630.67202000
....................................................CACCAACACCAACGAAAATTTACC.................................................................................................................................................................................................................................................................................................................................................2430.67202000
...............................................................................................................................................................................................................................................................................TG----------AACAATAACCATCGATAGCGACG...........................................................................................................2530.67202000
......................................................................................................................................................................................CGC---AATGTATGGT---------------AA-------------------------------------TGCCACTAT........................................................................................................................................................2420.50101000
....................................................................................................................................................CGACCTGCAAAG--TTGCGCCAAAACAAG............................................................................................................................................................................................................................................2720.50101000
........................................................................................................................................................................CAAAACAAGTAATGCGC---AATGTATGG........................................................................................................................................................................................................................2620.50101000
....................................................................................................................................................................................TGCGC---AATGTATGGT---------------AA-------------------------------------TGCCACT..........................................................................................................................................................2420.50101000
..........................................................................................................................................................................................................................................................................................................................TGAAAATTCGATAT---ATCGATAGTGCC......................................................................2620.50101000
.....................................................................................................................................................GACCTGCAAAG--TTGCGCCAAAACAAG............................................................................................................................................................................................................................................2620.50101000
....................................................................................................................................................................................TGCGC---AATGTATGGT---------------AA-------------------------------------TGCCACTAT........................................................................................................................................................2620.50101000
..................................................................................TAAACACTTATTTTAATATTTAATTACC...............................................................................................................................................................................................................................................................................................................2820.50101000
........................................................................................................................................................................CAAAACAAGTAATGCGC---AATGTATGGT---------------........................................................................................................................................................................................................2720.50101000
.......................................................................TTACCTACAAATAAACACTTATTTTAAA..........................................................................................................................................................................................................................................................................................................................2830.33101000
......................TGTCCATCCT-----T----------CCGCCACCAACA.................................................................................................................................................................................................................................................................................................................................................................2330.33101000
..............................................................................................................................................................................................................................................................................GTG----------AACAATAACCATCGATAGCGACGC..........................................................................................................2730.33101000
.....................TTGTCCATCCT-----T----------CCGCCACCAACACCAA.............................................................................................................................................................................................................................................................................................................................................................2830.33101000
................................................................................................................................................................................................TATGGT---------------AA-------------------------------------TGCCACTATCGATA----...............................................................................................................................................2230.33100010
........................................................................TACCTACAAATAAACACTTATTTTAA...........................................................................................................................................................................................................................................................................................................................2630.33101000
................................................................................................................................................................................................................................................................................G----------AACAATAACCATCGATAGCG..............................................................................................................2130.33100010
...............................................................................................................................................................................................................................................................................TG----------AACAATAACCATCGATAGCG..............................................................................................................2230.33100010
......................TGTCCATCCT-----T----------CCGCCACCAACACCAAA............................................................................................................................................................................................................................................................................................................................................................2830.33101000
..........................................................CACCAACGAAAATTTACCTACAAATAA........................................................................................................................................................................................................................................................................................................................................2730.33101000
.....................................................ACCAACACCAACGAAAATTTACC.................................................................................................................................................................................................................................................................................................................................................2330.33101000
......................TGTCCATCCT-----T----------CCGCCACCAACACCAA.............................................................................................................................................................................................................................................................................................................................................................2730.33101000
..............................................................................................................................................................................................TGTATGGT---------------AA-------------------------------------TGCCACTATCG......................................................................................................................................................2130.33101000
................................................................CGAAAATTTACCTACAAATAAACACT...................................................................................................................................................................................................................................................................................................................................2630.33101000
........................................................AACACCAACGAAAATTTACCTACAAA...........................................................................................................................................................................................................................................................................................................................................2630.33101000
...............................................................................................................................................................................................................................................................................TG----------AACAATAACCATCGATAGCGACGCAAA.......................................................................................................2930.33101000
........................................................................................................................................................................................................................................................................TA----GTG----------AACAATAACCATCGATAGCGACG...........................................................................................................2830.33101000
............................................................................................................................................................................................................................................................TGCCACTATCGATA----GTG----------AACAATAACCA.......................................................................................................................2830.33101000
................................................................................................................................................................................................................................................................................G----------AACAATAACCATCGATAGCGACGCAAA.......................................................................................................2830.33101000
......................................................................TTTACCTACAAATAAACACTTATTTT.............................................................................................................................................................................................................................................................................................................................2630.33101000
.................................................................................................................................................................................................ATGGT---------------AA-------------------------------------TGCCACTATCGATA----G..............................................................................................................................................2230.33101000
..................................................................................................................................................................................................TGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------AACA..............................................................................................................................2730.33100010
..........................................................CACCAACGAAAATTTACCTACAAA...........................................................................................................................................................................................................................................................................................................................................2430.33101000
......................TGTCCATCCT-----T----------CCGCCACCAACACCAAGA...........................................................................................................................................................................................................................................................................................................................................................2930.33101000
....................................................CACCAACACCAACGAAAATTTACCT................................................................................................................................................................................................................................................................................................................................................2530.33101000
.......................GTCCATCCT-----T----------CCGCCACCAACACCA..............................................................................................................................................................................................................................................................................................................................................................2530.33101000
......................TGTCCATCCT-----T----------CCGCCACCAACACC...............................................................................................................................................................................................................................................................................................................................................................2530.33101000
.....................................T----------CCGCCACCAACACCAACGAAA........................................................................................................................................................................................................................................................................................................................................................2230.33101000
.......................................................................TTACCTACAAATAAACACTTATTT..............................................................................................................................................................................................................................................................................................................................2430.33101000
.......................................................................................................................................................................................................................................................................ATA----GTG----------AACAATAACCATCGATAGCGA.............................................................................................................2730.33101000
..............................CT-----T----------CCGCCACCAACACCAACGAAAATT.....................................................................................................................................................................................................................................................................................................................................................2730.33101000
..............................................................................................................................................................................................TGTATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------A.................................................................................................................................2830.33100010
..............................................................................................................................................................................................TGTATGGT---------------AA-------------------------------------TGCCACTATCGATA----GG.............................................................................................................................................2630.33101000
...............................T-----T----------CCGCCACCAACACCAACGAAAAT......................................................................................................................................................................................................................................................................................................................................................2530.33101000
................................................................................................................................................................................................TATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------AA................................................................................................................................2730.33100010
.....................................................................................................................................................................................................................................................................................................................AAATATGAAAATTCGATAT---ATCGA.............................................................................2430.33101000
....................TTTGTCCATCCT-----T----------CCGCCACCAACACCAA.............................................................................................................................................................................................................................................................................................................................................................2930.33101000
.................................................................GAAAATTTACCTACAAATAAACACT...................................................................................................................................................................................................................................................................................................................................2530.33101000
..............................................................................................................................................................................................TGTATGGT---------------AA-------------------------------------TGCCACTATCGATA----GTG----------AA................................................................................................................................2930.33101000
............................TCCT-----T----------CCGCCACCAACACCA..............................................................................................................................................................................................................................................................................................................................................................2030.33101000
...................ATTTGTCCATCCT-----T----------CCGCCAC......................................................................................................................................................................................................................................................................................................................................................................2140.25101000
...........................................................ACCAACGAAAATTTACCTACAAATAAA.......................................................................................................................................................................................................................................................................................................................................2740.25101000
AG---------------AAATTTGTCCATCCT-----T----------CCGCCA.......................................................................................................................................................................................................................................................................................................................................................................2440.25101000
..................AATTTGTCCATCCT-----T----------CCGCCAC......................................................................................................................................................................................................................................................................................................................................................................2240.25100010
............................................................................................................................................................................................................................................................................................ACAATAACCATCGATAGCGACGCAAA.......................................................................................................2640.25101000
..................AATTTGTCCATCCT-----T----------CCGCCACCA....................................................................................................................................................................................................................................................................................................................................................................2440.25101000
................................................................................................................................................................................................................................................................................................TAACCATCGATAGCGACGCAAAAATAT..................................................................................................2740.25101000
.................................................................................................................................................................................................................................................................................................AACCATCGATAGCGACGCAAAAAT....................................................................................................2440.25101000
.................AAATTTGTCCATCCT-----T----------CCGCCACCA....................................................................................................................................................................................................................................................................................................................................................................2540.25101000
..................................................................................................................................................................................................................................................................................................................................CGATAT---ATCGATAGTGCCA.....................................................................1980.13100010
droVir3
GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGCAGGTCCACCCTGACACC---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCTCAAGCAGGTCCACCCTGAC......24200.75150000000000000000000000000000000000000000000000000000000000000015
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGCTCAAGCAGGTCCACCCTGAC......25200.306000000000000000000000000000000000000000000000000000000000000006
................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCAGGTCCACCCTGAC......23200.255000000000000000000000000000000000000000000000000000000000000005
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTCAAGCAGGTCCACCC..........26200.204000000000000000000000000000110000000101000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCAGGTCCACCCTGACA.....24200.153000000000000000000000000000000000000000000000000000000000000003
....TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGCAGG.................27200.102000000000000000000000000001010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTCAAGCAGGTCC..............21200.102000000000000010000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGCAGGTCCACCCTGACAC....24200.102000200000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCTCAAGCAGGTCCACCCTGACAC....26200.102000000000000000000000000000000000000000000000000000000000000002
.....C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGCAG..................25200.102000000000000000000000000000000002000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGCAGGTCCACCCT.........19200.102000000000000000000000000000000002000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGCAGGTCCACCCTGA.......21200.102000001000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTTACAAAGTGCTCAAGCA...................20200.051000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCTCAAGCAGGTCCACCCT.........21200.051000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTCAAGCAG..................20200.051000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGCAGGTCCACCCTGACACC---26200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AAAGTGCTCAAGCAGGTCCA.............20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCTCAAGCAGGTCCACCCTGACACC---27200.051001000000000000000000000000000000000000000000000000000000000000
.CTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGT............................19200.051000000000000000000000000000000000010000000000000000000000000000
GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTC........................24200.051000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AAAGTGCTCAAGCAGGTCCACCCT.........24200.051000000000000000000000000000000000000100000000000000000000000000
....TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGCAGGT................28200.051000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCAGGTCCACCCT.........18200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AAAGTGCTCAAGCAGGTCC..............19200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGCTCAAGCAGGTCCACCCTG........23200.051100000000000000000000000000000000000000000000000000000000000000
...ATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGCAG..................27200.051000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTCAAGCAGGTCCACCCTGA.......29200.051000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGCTCAAGCAGGTCCA.............21200.051000000100000000000000000000000000000000000000000000000000000000
...ATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAAGC....................25200.051000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTCAAGCAGGTC...............22200.051000000000001000000000000000000000000000000000000000000000000000
GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCA.......................25200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CATTTACAAAGTGCTCAAGCAGGTCCAC............28200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTCAAGCAGGTCCAC............26200.051000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTCAAGCAGGTCCACCCTGACA.....27200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGCAGGTCCACCCTGAA......22200.051000000000000000000000000100000000000000000000000000000000000000
GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGT............................20200.051000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTTACAAAGTGCTCAAGC....................19200.051000000000000000000000000000000001000000000000000000000000000000
.....C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAA......................21200.051000000000000000000000000000100000000000000000000000000000000000
.CTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCT.........................22200.051000000000001000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGCTCAAGCAGGTCCAC............19200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCAGGTCCACCCTGAC......21200.051000000000000000000000000000000000000000000000000000000000000001
...ATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGCTCAA......................23200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCTCAAGCAGGTCCC.............17200.051000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGCTCAAGCAGGTCC..............20200.051000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTCAAGCA...................19200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTCAAGCAGGTCA..............21200.051000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTCAAGCAGGTCC..............23200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGCTCAAGCAGGTCCACCCTGACA.....26200.051000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTCAAGCAGGTCCAC............25200.051000000000000000000000000000000000000000000000000000000100000000
droMoj3
GCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTACAAAGTGCTAAAGCAGGTCCATCCTGACACT---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATCC..........271211.2513566000690
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTCCATCC..........281210.2512367100514
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATC...........26127.929548000470
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTCCATCC..........26127.338856000311
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCC..............23125.426536600230
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCA.............24125.00605600013
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTCCATC...........27122.833415000190
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTCCATC...........25122.082515000100
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTCC..............24121.67201500041
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTC...............22121.58191200061
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCAT............25121.33161600000
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTCCA.............25121.25151300020
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGT................21120.678600020
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGG.................20120.506210030
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTC...............23120.506200031
....TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTACAAAGTGCTAAAGCAGG.................27120.425300011
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTCCAT............24120.334400000
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTCCAT............26120.334300010
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGG.................21120.334300010
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGT................22120.253300000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCAA............25120.253300000
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTCCA.............23120.253300000
............................................................................................................................................................................................................................................................................................................................................................................................AAAGTGCTAAAGCAGGTCCATCC..........23130.233100020
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTCC..............22120.172200000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTAAAGCAGGTCCATCC..........25120.172200000
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTCCATCCT.........27120.172100010
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGG.................19120.172200000
...................................................................................................................................................................................................................................................................................................................................................................................TATATTTACAAAGTGCTAAAGCAGG.................25120.172200000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCTAAAGCAGGTCCATCC..........20130.152100001
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATT...........26120.081000010
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCA..............23120.081100000
....................................................................................................................................................................................................................................................................................................................................................................................ATATTTACAAAGTGCTAAAGCAGGTCCA.............28120.081000010
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATAA..........27120.081100000
.....................................................................................................................................................................................................................................................................................................................................................................................TATTTACAAAGTGCTAAAGCAGG.................23120.081100000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCAAT...........26120.081100000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTAAAGCAGGTCCATCCTGAC......29120.081000010
.........................................................................................................................................................................................................................................................................................................................................................................................TACAAAGTGCTAAAGCAGGTC...............21120.081000010
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATCA..........27120.081100000
......................................................................................................................................................................................................................................................................................................................................................................................ATTTACAAAGTGCTAAAGCAGGTCCATC...........28120.081100000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTAAAGCAGGTCCATC...........24120.081100000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCAG............25120.081100000
.....................................................................................................................................................................................................................................................................................................................................................................................TATTTACAAAGTGCTAAAGCAGGT................24120.081100000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTAAAGCAGGTCCA.............22120.081100000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATCT..........27120.081100000
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCT.............24120.081100000
.......................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAGTGCTAAAGCAGGTCCATCCA.........29120.081000010
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATA...........26120.081100000
...........................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGCTAAAGCAGGTCCATCCT.........25120.081100000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGCTAAAGCAGGTCC..............21120.081000010
........................................................................................................................................................................................................................................................................................................................................................................................TTACAAAGTGCTAAAGCAGGTCCATCCT.........28120.081100000
....................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAGGTCCATCCTGACACT---22130.081010000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAGCAGGTCCATCCTGACACT---25130.081100000
................................................................................................................................................................................................................................................................................................................................................................................................TGCTAAAGCAGGTCCATCCTGACACT---26130.081100000
............................................................................................................................................................................................................................................................................................................................................................................................AAAGTGCTAAAGCAGGTCCATCCTGA.......26130.081100000
................................................................................................................................................................................................................................................................................................................................................................................................TGCTAAAGCAGGTCCATCCTGACA.....24130.081100000
.............................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTAAAGCAGGTCC..............18130.081000010
............................................................................................................................................................................................................................................................................................................................................................................................AAAGTGCTAAAGCAGGTCCATC...........22130.081100000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGCTAAAGCAGGTCCATCC..........21130.081000010
................................................................................................................................................................................................................................................................................................................................................................................................TGCTAAAGCAGGTCCATCC..........19130.081100000
droGri2
GCCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATTTACAAAGTGTTGAAGCAGGTCCATCCTGACACT---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAAGCAGGTCCATCCTG........21200.05110

Generated: 05/18/2015 at 07:30 AM