ID:

dan_3396

 Coordinate:

scaffold_6301:4713-4863 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-8.8 -8.5 -8.5

Flybase annnotation

CDS [Dana\GF13904-cds]; exon [dana_GLEANR_14041:1]; intron [Dana\GF13904-in]

No Repeatable elements found

mature
  1. scaffold_2739:1141-1165 -
  2. scaffold_2784:1552-1576 -
  3. scaffold_3771:6974-6998 +
  4. dan_3396  scaffold_6301:4726-4750 -
  5. scaffold_6483:8614-8638 +
  6. scaffold_6657:3677-3701 -
  7. scaffold_8309:2868-2892 -
  8. scaffold_9263:4951-4975 +
  9. scaffold_9819:4882-4906 -
  10. scaffold_10379:2758-2782 +
  11. scaffold_10665:803-827 +
  12. scaffold_12276:64319-64343 +
  13. scaffold_13077:175846-175870 -
  14. scaffold_13079:566960-566984 -
  15. scaffold_13079:604271-604295 -
  16. scaffold_13184:4908-4932 +
  17. scaffold_13230:2869303-2869327 +
  18. scaffold_13335:3280495-3280519 -
  19. scaffold_13469:746698-746722 +
  20. scaffold_13469:862254-862278 -
star
  1. scaffold_2739:1187-1211 -
  2. scaffold_3771:6928-6952 +
  3. dan_3396  scaffold_6301:4772-4796 -
  4. scaffold_6483:8568-8592 +
  5. scaffold_8534:158-182 -
  6. scaffold_9085:2542-2566 +
  7. scaffold_9263:4905-4929 +
  8. scaffold_9819:4928-4952 -
  9. scaffold_10379:2712-2736 +
  10. scaffold_10665:757-781 +
  11. scaffold_13077:175892-175916 -
  12. scaffold_13184:4862-4886 +
  13. scaffold_13203:8356-8380 +
  14. scaffold_13230:2869257-2869281 +
  15. scaffold_13250:1491043-1491067 +
  16. scaffold_13335:3280541-3280565 -
  17. scaffold_13469:746652-746676 +
  18. scaffold_13469:862300-862324 -
  19. scaffold_13501:182043-182067 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGGAGCAGTGATGACAACCTTTCTACTGATAGTGGTGCTTCCTCGATGGGTACCAGTGATGGAGAAGCTTCTTAAGATTACCTTAATTTAATAAACCCTTCTTATAACTATGTATGTCTTGCTTGCCTTTTACTGTGGAGTCTCTGGATCGTACACTTCAAATCTCTTGTGGTGTCCATCTCTTGCCAACATGGCCAGCCCGGGTCGTTGTTCGACCAGCTGGAATTCTTCTCCTTGGGTTATTGTCGTC
*********************************************************************************************************************....................((((....((((.....((((.(((.....))).)))))))).))))....*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V055
head
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCTTC................... 27 0 20 2.50 50 50 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCC............................................................... 25 0 20 1.95 39 39 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTCTCC................ 27 0 20 1.80 36 36 0 0 0
......................................................................................................................................................................................................................GACCAGCTGGAATTCTTCTCCTTGGGT.......... 27 0 20 1.25 25 25 0 0 0
.....................TTCTACTGATAGTGGTGCTTCCTCGA............................................................................................................................................................................................................ 26 0 20 0.95 19 19 0 0 0
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCT................................................................... 27 0 20 0.85 17 17 0 0 0
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTCG.. 28 0 18 0.83 15 15 0 0 0
........................TACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................ 27 0 20 0.75 15 15 0 0 0
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTCC................ 26 0 20 0.75 15 15 0 0 0
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTGGGT.......... 29 0 20 0.70 14 14 0 0 0
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTCCT............... 27 0 20 0.70 14 14 0 0 0
.................................................................................................................................................................AATCTCTTGTGGTGTCCATCTCTTGCC............................................................... 27 0 20 0.65 13 13 0 0 0
...........................TGATAGTGGTGCTTCCTCGATGGGTAC..................................................................................................................................................................................................... 27 0 20 0.50 10 10 0 0 0
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGT.......... 24 0 20 0.50 10 10 0 0 0
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCCCG................................................ 28 0 20 0.45 9 9 0 0 0
.....................TTCTACTGATAGTGGTGCTTCCTCG............................................................................................................................................................................................................. 25 0 20 0.45 9 9 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTCTCCTT.............. 29 0 20 0.45 9 9 0 0 0
..............................................................................................................................................................................................................CGTTGTTCGACCAGCTGGAATTCTTC................... 26 0 20 0.40 8 8 0 0 0
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCCC................................................. 27 0 20 0.40 8 3 5 0 0
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCCCGG............................................... 29 0 20 0.40 8 8 0 0 0
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCC.................................................. 26 0 20 0.40 8 0 8 0 0
................................................................................................................................................................AAATCTCTTGTGGTGTCCATCTCTTGC................................................................ 27 0 20 0.35 7 7 0 0 0
.....................TTCTACTGATAGTGGTGCTTCCTCGAT........................................................................................................................................................................................................... 27 0 20 0.35 7 7 0 0 0
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTC... 27 0 20 0.35 7 7 0 0 0
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCCAACATG......................................................... 27 0 20 0.30 6 6 0 0 0
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGTTAT....... 27 0 20 0.30 6 6 0 0 0
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAACA........................................................... 27 0 20 0.30 6 6 0 0 0
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTGCC............................................................... 26 0 20 0.25 5 5 0 0 0
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTCTTGC................................................................ 29 0 20 0.25 5 5 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCCAACA........................................................... 29 0 20 0.25 5 5 0 0 0
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAACATG......................................................... 29 0 20 0.25 5 5 0 0 0
........................................................................................................................................................................TGTGGTGTCCATCTCTTGCCAACATG......................................................... 26 0 20 0.25 5 5 0 0 0
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTCTTCTCC................ 28 0 20 0.25 5 5 0 0 0
..........................................................................................................................................................................TGGTGTCCATCTCTTGCCAACATGGCCA..................................................... 28 0 20 0.25 5 5 0 0 0
......................................................................................................................................................................................................................GACCAGCTGGAATTCTTCTCCTTG............. 24 0 20 0.20 4 4 0 0 0
..........................................................................................................................................................................TGGTGTCCATCTCTTGCCAACATG......................................................... 24 0 20 0.20 4 4 0 0 0
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCTTCTC................. 29 0 20 0.20 4 4 0 0 0
...........................TGATAGTGGTGCTTCCTCGATGGGTACCA................................................................................................................................................................................................... 29 0 20 0.20 4 4 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCCAAC............................................................ 28 0 20 0.20 4 4 0 0 0
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCT..................... 25 0 20 0.20 4 4 0 0 0
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTCCTTG............. 29 0 20 0.20 4 4 0 0 0
..................................................................................................................................................................................................................................TTCTTCTCCTTGGGTTATTGTCGTC 25 0 20 0.20 4 3 1 0 0
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAAC............................................................ 26 0 20 0.20 4 4 0 0 0
.............GACAACCTTTCTACTGATAGTGGTGCT................................................................................................................................................................................................................... 27 0 20 0.15 3 3 0 0 0
.............................................................................................................................................................................................................TCGTTGTTGGACCAGCTGGAATTCTTC................... 27 1 20 0.15 3 3 0 0 0
...........................................................................................................................................................ACTTCAAATCTCTTGTGGTGTCCATCTCT................................................................... 29 0 20 0.15 3 3 0 0 0
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCTT.................................................................. 28 0 20 0.15 3 3 0 0 0
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCTT.................... 26 0 20 0.15 3 3 0 0 0
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCTTG............. 27 0 20 0.15 3 3 0 0 0
.................................................................................................................................................................AATCTCTTGTGGTGTCCATCTCTTGC................................................................ 26 0 20 0.15 3 3 0 0 0
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCCAACATGG........................................................ 28 0 20 0.15 3 3 0 0 0
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTC.................................................................... 26 0 20 0.15 3 3 0 0 0
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTGCCAA............................................................. 26 0 20 0.15 3 3 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTC................... 24 0 20 0.15 3 3 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTCTC................. 26 0 20 0.15 3 3 0 0 0
..................................................................................................................................................................................................................GTTCGACCAGCTGGAATTCTTCTCCTT.............. 27 0 20 0.15 3 3 0 0 0
...........................TGATAGTGGTGCTTCCTCGATGGGTA...................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0
.................................................................................................................................................................................................................TGTTCGACAAGCTGGAATTCTTCTCC................ 26 1 20 0.15 3 3 0 0 0
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTG..... 25 0 20 0.15 3 3 0 0 0
..............................................................................................................................................................................................................................GGAATTCTTCTCCTTGGGTTATTGTCG.. 27 0 18 0.11 2 2 0 0 0
......................TCTACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................ 29 0 20 0.10 2 2 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTC...................... 21 0 20 0.10 2 2 0 0 0
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTCTT.................................................................. 27 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................................TCTCTTGCCAACATGGCCAGCCCGG............................................... 25 0 20 0.10 2 0 1 1 0
...............................................................................................................................................................CAAATCTCTTGTGGTGTCCATCTCTTG................................................................. 27 0 20 0.10 2 2 0 0 0
........................TACTGATAGTGGTGCTTCCTCGATG.......................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0
.............................................................................................................................................................TTCAAATCGCTTGTGGTGTCCATCTCT................................................................... 27 1 20 0.10 2 2 0 0 0
..........................CTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCTTGG............ 28 0 20 0.10 2 2 0 0 0
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTG............. 26 0 20 0.10 2 2 0 0 0
.......................CTACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................ 28 0 20 0.10 2 2 0 0 0
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGTTATT...... 27 0 20 0.10 2 2 0 0 0
................................................................................................................................................................................CCATCTCTTGCCAACATGGCCAGCCCG................................................ 27 0 20 0.10 2 2 0 0 0
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTC.................................................................... 25 0 20 0.10 2 2 0 0 0
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGG............ 21 0 20 0.10 2 2 0 0 0
....................TTTCTACTGATAGTGGTGCTTCCTCGA............................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGTTAT....... 26 0 20 0.10 2 2 0 0 0
..................................................................................................................................................................................................................GTTCGACCAGCTGGAATTCTTCTCCT............... 26 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................CATCTCTTGCCAACATGGCCAGCCC................................................. 25 0 20 0.10 2 0 2 0 0
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTCTTC................... 25 0 20 0.10 2 2 0 0 0
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGT.......... 23 0 20 0.10 2 2 0 0 0
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGTTATT...... 28 0 20 0.10 2 2 0 0 0
...............................................................................................................................................................CAAATCTCTTGTGGTGTCCATCTCT................................................................... 25 0 20 0.10 2 2 0 0 0
.......................................................................................................................................................................................................................ACCAGCTGGAATTCTTCTCCTTGG............ 24 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................TCTCTTGTCGTGTCCATCTCTTGCCAA............................................................. 27 1 20 0.10 2 2 0 0 0
..................................................................................................................................................................................ATCTCTTGCCAACATGGCCAGCCCGG............................................... 26 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................................................TGTTCGACGAGCTGGAATTCTTCTCCT............... 27 1 20 0.10 2 2 0 0 0
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTGG............ 27 0 20 0.10 2 2 0 0 0
.....................TTCTACTGATAGTGGTGCTTCCT............................................................................................................................................................................................................... 23 0 20 0.10 2 1 1 0 0
.............................................................................................................................................................................................................................TGGAATTCGTCTCCTTGGGTTATTGTCG.. 28 1 18 0.06 1 1 0 0 0
.............................................................................................AAACCCTTCTTATAACTATGTATGC..................................................................................................................................... 25 1 18 0.06 1 0 1 0 0
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTCGA. 29 1 18 0.06 1 1 0 0 0
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTCGT. 29 0 18 0.06 1 1 0 0 0
.............................................................................................................................................................................................................................TGGAATTCATCTCCTTGGGTTATTGTCG.. 28 1 18 0.06 1 1 0 0 0
.....................................................................................................................TCTTGCTTGCCTTTTACTGTGGAGT............................................................................................................. 25 0 19 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................GAATTCTTCTCCTTGGGTTATTGTCG.. 26 0 19 0.05 1 1 0 0 0
.............................................................................................................................................................................................................TCGTTGTTTGACCAGCTGGAATTCTTC................... 27 1 20 0.05 1 1 0 0 0
............................................................................................................................................................CTTCAAATGTCTTGTGGTGTCCATCTC.................................................................... 27 1 20 0.05 1 1 0 0 0
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCTTG................................................................. 29 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................GAATTCTTCTCCTTGGGTTATTGTC... 25 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAACAT.......................................................... 28 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................TCTCTTGTCGTGTCCATCTCTTGCCAACA........................................................... 29 1 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................................AGCTGGAAATCTTCTCCTTGGGTTATTG..... 28 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTGGG........... 28 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................CCATCTCTTGCCAACATGGCCAGCCCGG............................................... 28 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................GGTGTCCATCTCTTGCCAACATGGCCAG.................................................... 28 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................GTTCGGCCAGCTGGAATTCTTCTCCTT.............. 27 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCATGGGT.......... 29 1 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCT............... 18 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................TGTCCATCTCTTGCCAACATGGCCAGC................................................... 27 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................CCATCTCTTGCCAACATGGCCAGCCC................................................. 26 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................TGGTGTCCATCTCTTGCCAACATGGC....................................................... 26 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................TCCACCAGCTGGAATTCTTCTCCT............... 24 1 20 0.05 1 0 1 0 0
............................................................................................................CCATGCATGTCTTGCTCGCC........................................................................................................................... 20 3 20 0.05 1 0 1 0 0
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCC............................................................... 21 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGT.... 26 0 20 0.05 1 0 0 1 0
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCCAACA........................................................... 25 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................................................................ACAGCTGGAATTCTTCTCCTTGGGT.......... 25 1 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................GTTCGACCAGCTGGAATTCTTGTCCTT.............. 27 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTT.............. 25 0 20 0.05 1 0 1 0 0
...............................................................................................................................................................................TCCATCTCTTGCCAACATGACCAGCCCGG............................................... 29 1 20 0.05 1 0 1 0 0
..............................................................................................................................................................................................................................GGAATTCTTCTCCTTGGGTTATTGTC... 26 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTGCCAAC............................................................ 27 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................GTTCGACCGGCTGGAATTCTTCTCC................ 25 1 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTC................. 25 0 20 0.05 1 1 0 0 0
.....................TTCTACTGGTAGTGGTGCTTCCTCGA............................................................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................................TTCTTCTCCTTGGGTTATTGTCGT. 24 0 20 0.05 1 0 1 0 0
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTGCCA.............................................................. 25 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................CGACCAGCTGGAATTCTTCTCCTTGGGT.......... 28 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTGTTCTCCT............... 29 1 20 0.05 1 1 0 0 0
.........................ACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................ACCAGCTGGAATTCTTCTCCTTGGGT.......... 26 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTGC................................................................ 25 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................ACTTCAAATCTCTTGTGGTGTCCATC...................................................................... 26 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................................CAGCTGGATTTCTTCTCCTTGGGT.......... 24 1 20 0.05 1 1 0 0 0
........................................................................................................................................................................................................................CCAGCTGGAATTCTTCTCCTTGGG........... 24 0 20 0.05 1 0 1 0 0
...............................................................................................................................................................................TCCATCTCTTGCAAACATGGCCAGCC.................................................. 26 1 20 0.05 1 0 1 0 0
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTCTTG................................................................. 28 0 20 0.05 1 1 0 0 0
...........................TGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCT..................... 22 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................TCGTTGTTGGACCAGCTGGAATT....................... 23 1 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................GACCAGCTAGAATTCTTCTCCTTGGG........... 26 1 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGATGGAATT....................... 20 1 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................CGTTGTTCGACCAGCTGGAATTCTT.................... 25 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................TCGTTGTTCGACCATCTGGAATTCTTCTC................. 29 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTCCCAACA........................................................... 28 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCT................................................................... 21 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTC.................................................................... 20 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................TCAATCTCTTGCCAACATGGCCAGC................................................... 25 1 20 0.05 1 0 1 0 0
...................................................................................................................................................................................CCTCTTGCCAACATGGCCAGCCCGG............................................... 25 1 20 0.05 1 1 0 0 0
.................................................................................................................................................................AATCTCTTGTGGTGTCCATCTCTTGCCA.............................................................. 28 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................TCAAATCTCTTGTTGTGTCCATCTCT................................................................... 26 1 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAA......................... 18 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCC................ 24 0 20 0.05 1 1 0 0 0
................................................................................................................................................................AAATCTCTCGTGGTGTCCATCTCTTGCC............................................................... 28 1 20 0.05 1 1 0 0 0
.......................CTACTGATAGTGGTGCTTCCTCGATG.......................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
...................CTTTCTACTGATAGTGGTGCTTCCTC.............................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCCAAA............................................................ 28 1 20 0.05 1 1 0 0 0
........................TACTGATAGTGGTGCTTCC................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCC............................................................... 23 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................ATCTCTTGTTGTGTCGAT....................................................................... 18 2 20 0.05 1 0 0 1 0
...........................................................................................................................................................................................................................GCTGGAATTCTTCTCCTTGGGTTATTG..... 27 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................CGACCAGCTGGAATTCTTCTCCTT.............. 24 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................TTGCTCGACCAGCTTGAATTCTTCTCC................ 27 2 20 0.05 1 1 0 0 0
........................................................................................................................................................................TGTGGTGTCCATCTCTTGCCAACATGGCC...................................................... 29 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGTTATTG..... 29 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................CTCTTGTGCTGTCCATCTCTTGCCAAC............................................................ 27 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCTT.............. 26 0 20 0.05 1 1 0 0 0
................................................................................................................................................................AAATCTCTTGTGGTGTCCATCTCTT.................................................................. 25 0 20 0.05 1 1 0 0 0
.....................TTATACTGATAGTGGTGCTTCCTC.............................................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0
...............................................................................................................................................................................TGCATCTCTTGCCAACATGGCCAGC................................................... 25 1 20 0.05 1 0 1 0 0
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTG................................................................. 24 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................CAAATCTCGTGTGGTGTCCATC...................................................................... 22 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTC................. 23 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................TCCATCTCGTGCCAACATGGCCAGCCC................................................. 27 1 20 0.05 1 1 0 0 0
......................................................................................................................................................................CTTGTGGTGTCCATCTCTTGCCAACAC.......................................................... 27 1 20 0.05 1 1 0 0 0
.......................................................................................................................................................................TTGTGGCTTCCATCTGTTGC................................................................ 20 3 20 0.05 1 0 0 1 0
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGTTATTG..... 28 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................AATCTCTTATGGTGTCCATCTCTTGCC............................................................... 27 1 20 0.05 1 1 0 0 0
.......................CTACTGATAGTGGTGCTTCCT............................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
......................TCTACTGATAGTGGTGCTTCCT............................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCT............... 25 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................GCCAGCCCGGCTCGTTGTTCGACC................................. 24 1 20 0.05 1 0 1 0 0
.....................TTCTACTGGTAGTGGTGCTTCTTCGA............................................................................................................................................................................................................ 26 2 20 0.05 1 1 0 0 0
TTGGGGCAGTGATGACCAC........................................................................................................................................................................................................................................ 19 2 20 0.05 1 0 0 0 1
......................TCTACTGATAGTGGTGCTTCCTCGA............................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0
................AACCTTTCGACTGATAGTGGTGCTTCC................................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................................CTTCTCCTTGGGTTATTGTC... 20 0 20 0.05 1 1 0 0 0
............................GATAGTGGTGCTTCCTCGATGGGTAC..................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................................TGGAATTCGTCTCCTTGGGTTATTGTC... 27 1 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTCTTCT.................. 26 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCA................................................................... 27 1 20 0.05 1 1 0 0 0
...............CAACCTTTCTACTGATAGTGG....................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................TGTGGTGTACATCTCTTGCCAACAT.......................................................... 25 1 20 0.05 1 1 0 0 0
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCAGCTCT................................................................... 26 1 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTC................... 23 0 20 0.05 1 1 0 0 0
...............CAACCTTTCTACTGATAGTGGTGCTT.................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
........................GACTGATAGTGGTGCTTCCCC.............................................................................................................................................................................................................. 21 2 20 0.05 1 0 1 0 0
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGA.......................... 20 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTACC................................................................ 24 2 20 0.05 1 1 0 0 0
................AACCTTTCTACTGATAGTGGTGCTT.................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTGCCAA............................................................. 28 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................ATCTCTTGCCAACATGGCCAGCCC................................................. 24 0 20 0.05 1 0 1 0 0
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATT....................... 23 0 20 0.05 1 1 0 0 0
............................................................................................................................................................CTTCAAATCTCTTGTGGTGTCCATCTCT................................................................... 28 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................TTGTTCGAGCAGCTGGAATTCTTCTCCT............... 28 1 20 0.05 1 1 0 0 0
..................................................................................................................................................................ATCTCTTGGGGTGTCCATCTCTTGCC............................................................... 26 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................................TCTTCTCCTTGGGTTATTGTCGT. 23 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................................GTCCATCTCTTGCCAACATG......................................................... 20 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................ATGGTGTCCATCTCTTGCCAACATG......................................................... 25 1 20 0.05 1 1 0 0 0
...........................TGATAGTGGTGCTTCCTCGATGGGTACT.................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0
...............CAACCTTTCTACTGATAGTGGTGCTTC................................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................................AGCTGGAAGTCTTCTCCTTGGGTTAT....... 26 1 20 0.05 1 1 0 0 0
.............................................................................................................................................................TTCAAATCACTTGTGGTGTCCATCTC.................................................................... 26 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

AACCTCGTCACTACTGTTGGAAAGATGACTATCACCACGAAGGAGCTACCCATGGTCACTACCTCTTCGAAGAATTCTAATGGAATTAAATTATTTGGGAAGAATATTGATACATACAGAACGAACGGAAAATGACACCTCAGAGACCTAGCATGTGAAGTTTAGAGAACACCACAGGTAGAGAACGGTTGTACCGGTCGGGCCCAGCAACAAGCTGGTCGACCTTAAGAAGAGGAACCCAATAACAGCAG
***************************************************************....................((((....((((.....((((.(((.....))).)))))))).))))....********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
........CACTACTGTTGGAAAGATGACTA............................................................................................................................................................................................................................ 23 0 20 0.20 4 1 2 1 0 0
........................................................................................................................................................ATGTGACGTATAGAGAACA................................................................................ 19 2 15 0.07 1 0 0 0 0 1
......................................................................................................................................................GCAGGTGAAGTCTACAGAACA................................................................................ 21 3 17 0.06 1 0 0 1 0 0
.......................................................................................................................................................................................................GGGCCCACCCACAAGCGGGT................................ 20 3 19 0.05 1 0 0 0 0 1
...............GTTGGAAAGATGACTATCACCACGAAG................................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
........................ATGACTATCACCACGAAGGAGCTACCC........................................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................AGAACACCACAGCAAGAG.................................................................... 18 2 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................TGAAGTTTAGAGAACACCA............................................................................. 19 0 20 0.05 1 0 0 1 0 0
.....................................................................................................................................................................................................................GCTGGTCGACCTTAAGAAGAGGA............... 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................CAAGCTGGTCGACCTTAAGAA.................... 21 0 20 0.05 1 0 1 0 0 0
.......TCACTACTGTTGGAAAGATGACTAC........................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................AGAACACCACAGGTAGAGAACGGTTGT........................................................... 27 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................AGAGAACACCACAGGTAGAGAA.................................................................. 22 0 20 0.05 1 0 1 0 0 0
........................................................................................................................ACGAACGGAAAATGACACCT............................................................................................................... 20 0 20 0.05 1 0 0 0 1 0
...................................CACGAAGGAGCTACCCATGGT................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
.....................................................................................................................................................................................................................GCTGGTCGACCTTAAGAAGAGGAACC............ 26 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................GTTTAGAGAACACCACAGGTAGAGAA.................................................................. 26 0 20 0.05 1 1 0 0 0 0
........CACTACTGTTGGAAGGATGACTA............................................................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................AAGAAGAGGAGACCAATAA...... 19 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_6301:4663-4913 - dan_3396 TTGGAGCAGTGATGACAACCTTTCTACTGATAGTGGTGCTTCCTCGATGGGTACCAGTGATGGAGAAGCTTCTTAAGATTACCTTAATTTAATAAACCCTTCTTATAACTATGTATGTCTTGCTTGCCTTTTACTGTGGAGTCTCTGGATCGTACACTTCAAATCTCTTGTGGTGTCCATCTCTTGCCAACATGGCCAGCCCGGGTCGTTGTTCGACCAGCTGGAATTCTTCTCCTTGGGTTATTGTCGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTGGAGCAGTGATGACAACCTTTCTACTGATAGTGGTGCTTCCTCGATGGGTACCAGTGATGGAGAAGCTTCTTAAGATTACCTTAATTTAATAAACCCTTCTTATAACTATGTATGTCTTGCTTGCCTTTTACTGTGGAGTCTCTGGATCGTACACTTCAAATCTCTTGTGGTGTCCATCTCTTGCCAACATGGCCAGCCCGGGTCGTTGTTCGACCAGCTGGAATTCTTCTCCTTGGGTTATTGTCGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCTTC...................27202.50505000000
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCC...............................................................25201.95393900000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTCTCC................27201.80363600000
......................................................................................................................................................................................................................GACCAGCTGGAATTCTTCTCCTTGGGT..........27201.25252500000
.....................TTCTACTGATAGTGGTGCTTCCTCGA............................................................................................................................................................................................................26200.95191900000
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCT...................................................................27200.85171700000
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTCG..28180.83151500000
........................TACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................27200.75151500000
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTCC................26200.75151500000
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTGGGT..........29200.70141400000
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTCCT...............27200.70141400000
.................................................................................................................................................................AATCTCTTGTGGTGTCCATCTCTTGCC...............................................................27200.65131300000
...........................TGATAGTGGTGCTTCCTCGATGGGTAC.....................................................................................................................................................................................................27200.50101000000
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGT..........24200.50101000000
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCCCG................................................28200.459900000
.....................TTCTACTGATAGTGGTGCTTCCTCG.............................................................................................................................................................................................................25200.459900000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTCTCCTT..............29200.459900000
..............................................................................................................................................................................................................CGTTGTTCGACCAGCTGGAATTCTTC...................26200.408800000
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCCC.................................................27200.408350000
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCCCGG...............................................29200.408800000
...............................................................................................................................................................................TCCATCTCTTGCCAACATGGCCAGCC..................................................26200.408080000
................................................................................................................................................................AAATCTCTTGTGGTGTCCATCTCTTGC................................................................27200.357700000
.....................TTCTACTGATAGTGGTGCTTCCTCGAT...........................................................................................................................................................................................................27200.357700000
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTC...27200.357700000
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCCAACATG.........................................................27200.306600000
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGTTAT.......27200.306600000
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAACA...........................................................27200.306600000
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTGCC...............................................................26200.255500000
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTCTTGC................................................................29200.255500000
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCCAACA...........................................................29200.255500000
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAACATG.........................................................29200.255500000
........................................................................................................................................................................TGTGGTGTCCATCTCTTGCCAACATG.........................................................26200.255500000
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTCTTCTCC................28200.255500000
..........................................................................................................................................................................TGGTGTCCATCTCTTGCCAACATGGCCA.....................................................28200.255500000
......................................................................................................................................................................................................................GACCAGCTGGAATTCTTCTCCTTG.............24200.204400000
..........................................................................................................................................................................TGGTGTCCATCTCTTGCCAACATG.........................................................24200.204400000
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCTTCTC.................29200.204400000
...........................TGATAGTGGTGCTTCCTCGATGGGTACCA...................................................................................................................................................................................................29200.204400000
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCCAAC............................................................28200.204400000
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCT.....................25200.204400000
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTCCTTG.............29200.204400000
..................................................................................................................................................................................................................................TTCTTCTCCTTGGGTTATTGTCGTC25200.204310000
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAAC............................................................26200.204400000
.............GACAACCTTTCTACTGATAGTGGTGCT...................................................................................................................................................................................................................27200.153300000
...........................................................................................................................................................ACTTCAAATCTCTTGTGGTGTCCATCTCT...................................................................29200.153300000
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCTT..................................................................28200.153300000
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATTCTT....................26200.153300000
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCTTG.............27200.153300000
.................................................................................................................................................................AATCTCTTGTGGTGTCCATCTCTTGC................................................................26200.153300000
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCCAACATGG........................................................28200.153300000
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTC....................................................................26200.153300000
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTGCCAA.............................................................26200.153300000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTC...................24200.153300000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCTTCTC.................26200.153300000
..................................................................................................................................................................................................................GTTCGACCAGCTGGAATTCTTCTCCTT..............27200.153300000
...........................TGATAGTGGTGCTTCCTCGATGGGTA......................................................................................................................................................................................................26200.153300000
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTG.....25200.153300000
..............................................................................................................................................................................................................................GGAATTCTTCTCCTTGGGTTATTGTCG..27180.112200000
......................TCTACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................29200.102200000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTC......................21200.102200000
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTCTT..................................................................27200.102200000
...................................................................................................................................................................................TCTCTTGCCAACATGGCCAGCCCGG...............................................25200.102011000
...............................................................................................................................................................CAAATCTCTTGTGGTGTCCATCTCTTG.................................................................27200.102200000
........................TACTGATAGTGGTGCTTCCTCGATG..........................................................................................................................................................................................................25200.102200000
..........................CTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................25200.102200000
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCTTGG............28200.102200000
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTG.............26200.102200000
.......................CTACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................28200.102200000
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGTTATT......27200.102200000
................................................................................................................................................................................CCATCTCTTGCCAACATGGCCAGCCCG................................................27200.102200000
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTC....................................................................25200.102200000
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGG............21200.102200000
....................TTTCTACTGATAGTGGTGCTTCCTCGA............................................................................................................................................................................................................27200.102200000
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGTTAT.......26200.102200000
..................................................................................................................................................................................................................GTTCGACCAGCTGGAATTCTTCTCCT...............26200.102200000
.................................................................................................................................................................................CATCTCTTGCCAACATGGCCAGCCC.................................................25200.102020000
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTCTTC...................25200.102200000
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGT..........23200.102200000
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGTTATT......28200.102200000
...............................................................................................................................................................CAAATCTCTTGTGGTGTCCATCTCT...................................................................25200.102200000
.......................................................................................................................................................................................................................ACCAGCTGGAATTCTTCTCCTTGG............24200.102200000
..................................................................................................................................................................................ATCTCTTGCCAACATGGCCAGCCCGG...............................................26200.102200000
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTGG............27200.102200000
.....................TTCTACTGATAGTGGTGCTTCCT...............................................................................................................................................................................................................23200.102110000
.............................................................................................AAACCCTTCTTATAACTATGTATGC.....................................................................................................................................25180.061010000
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTCGA.29180.061100000
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGTCGT.29180.061100000
.....................................................................................................................TCTTGCTTGCCTTTTACTGTGGAGT.............................................................................................................25190.051100000
...............................................................................................................................................................................................................................GAATTCTTCTCCTTGGGTTATTGTCG..26190.051100000
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCTTG.................................................................29200.051100000
...............................................................................................................................................................................................................................GAATTCTTCTCCTTGGGTTATTGTC...25200.051100000
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCCAACAT..........................................................28200.051100000
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTTGGG...........28200.051100000
................................................................................................................................................................................CCATCTCTTGCCAACATGGCCAGCCCGG...............................................28200.051100000
...........................................................................................................................................................................GGTGTCCATCTCTTGCCAACATGGCCAG....................................................28200.051100000
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCT...............18200.051100000
.............................................................................................................................................................................TGTCCATCTCTTGCCAACATGGCCAGC...................................................27200.051100000
................................................................................................................................................................................CCATCTCTTGCCAACATGGCCAGCCC.................................................26200.051100000
..........................................................................................................................................................................TGGTGTCCATCTCTTGCCAACATGGC.......................................................26200.051100000
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCC...............................................................21200.051100000
.............................................................................................................................................................................................................................TGGAATTCTTCTCCTTGGGTTATTGT....26200.051001000
.......................................................................................................................................................................TTGTGGTGTCCATCTCTTGCCAACA...........................................................25200.051100000
....................................................................................................................................................................................................................TCGACCAGCTGGAATTCTTCTCCTT..............25200.051010000
..............................................................................................................................................................................................................................GGAATTCTTCTCCTTGGGTTATTGTC...26200.051100000
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTGCCAAC............................................................27200.051100000
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTCTC.................25200.051100000
..................................................................................................................................................................................................................................TTCTTCTCCTTGGGTTATTGTCGT.24200.051010000
....................................................................................................................................................................CTCTTGTGGTGTCCATCTCTTGCCA..............................................................25200.051100000
.....................................................................................................................................................................................................................CGACCAGCTGGAATTCTTCTCCTTGGGT..........28200.051100000
.........................ACTGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................26200.051100000
.......................................................................................................................................................................................................................ACCAGCTGGAATTCTTCTCCTTGGGT..........26200.051100000
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTGC................................................................25200.051100000
...........................................................................................................................................................ACTTCAAATCTCTTGTGGTGTCCATC......................................................................26200.051100000
........................................................................................................................................................................................................................CCAGCTGGAATTCTTCTCCTTGGG...........24200.051010000
..............................................................................................................................................................TCAAATCTCTTGTGGTGTCCATCTCTTG.................................................................28200.051100000
...........................TGATAGTGGTGCTTCCTCGATGGG........................................................................................................................................................................................................24200.051100000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAATTCT.....................22200.051100000
..............................................................................................................................................................................................................CGTTGTTCGACCAGCTGGAATTCTT....................25200.051100000
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCT...................................................................21200.051100000
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTC....................................................................20200.051100000
.................................................................................................................................................................AATCTCTTGTGGTGTCCATCTCTTGCCA..............................................................28200.051100000
................................................................................................................................................................................................................TTGTTCGACCAGCTGGAA.........................18200.051100000
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCC................24200.051100000
.......................CTACTGATAGTGGTGCTTCCTCGATG..........................................................................................................................................................................................................26200.051100000
...................CTTTCTACTGATAGTGGTGCTTCCTC..............................................................................................................................................................................................................26200.051100000
...................................................................................................................................................................TCTCTTGTGGTGTCCATCTCTTGCCAAA............................................................28200.051100000
........................TACTGATAGTGGTGCTTCC................................................................................................................................................................................................................19200.051100000
.....................................................................................................................................................................TCTTGTGGTGTCCATCTCTTGCC...............................................................23200.051100000
...........................................................................................................................................................................................................................GCTGGAATTCTTCTCCTTGGGTTATTG.....27200.051100000
.....................................................................................................................................................................................................................CGACCAGCTGGAATTCTTCTCCTT..............24200.051100000
........................................................................................................................................................................TGTGGTGTCCATCTCTTGCCAACATGGCC......................................................29200.051100000
.........................................................................................................................................................................................................................CAGCTGGAATTCTTCTCCTTGGGTTATTG.....29200.051100000
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCTT..............26200.051100000
................................................................................................................................................................AAATCTCTTGTGGTGTCCATCTCTT..................................................................25200.051100000
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTG.................................................................24200.051100000
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTC.................23200.051100000
......................................................................................................................................................................CTTGTGGTGTCCATCTCTTGCCAACAC..........................................................27200.051100000
..........................................................................................................................................................................................................................AGCTGGAATTCTTCTCCTTGGGTTATTG.....28200.051100000
.......................CTACTGATAGTGGTGCTTCCT...............................................................................................................................................................................................................21200.051100000
......................TCTACTGATAGTGGTGCTTCCT...............................................................................................................................................................................................................22200.051100000
...................................................................................................................................................................................................................TTCGACCAGCTGGAATTCTTCTCCT...............25200.051100000
......................TCTACTGATAGTGGTGCTTCCTCGA............................................................................................................................................................................................................25200.051100000
....................................................................................................................................................................................................................................CTTCTCCTTGGGTTATTGTC...20200.051100000
............................GATAGTGGTGCTTCCTCGATGGGTAC.....................................................................................................................................................................................................26200.051100000
...............................................................................................................................................................................................................GTTGTTCGACCAGCTGGAATTCTTCT..................26200.051100000
.............................................................................................................................................................TTCAAATCTCTTGTGGTGTCCATCTCA...................................................................27200.051100000
...............CAACCTTTCTACTGATAGTGG.......................................................................................................................................................................................................................21200.051100000
.................................................................................................................................................................................................................TGTTCGACCAGCTGGAATTCTTC...................23200.051100000
...............CAACCTTTCTACTGATAGTGGTGCTT..................................................................................................................................................................................................................26200.051100000
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGA..........................20200.051100000
................AACCTTTCTACTGATAGTGGTGCTT..................................................................................................................................................................................................................25200.051100000
..................................................................................................................................................................ATCTCTTGTGGTGTCCATCTCTTGCCAA.............................................................28200.051100000
..................................................................................................................................................................................ATCTCTTGCCAACATGGCCAGCCC.................................................24200.051010000
.............................................................................................................................................................................................................TCGTTGTTCGACCAGCTGGAATT.......................23200.051100000
............................................................................................................................................................CTTCAAATCTCTTGTGGTGTCCATCTCT...................................................................28200.051100000
...................................................................................................................................................................................................................................TCTTCTCCTTGGGTTATTGTCGT.23200.051010000
..............................................................................................................................................................................GTCCATCTCTTGCCAACATG.........................................................20200.051100000
...........................TGATAGTGGTGCTTCCTCGATGGGTACT....................................................................................................................................................................................................28200.051100000
...............CAACCTTTCTACTGATAGTGGTGCTTC.................................................................................................................................................................................................................27200.051100000

Generated: 05/18/2015 at 07:28 AM