ID:

dan_339

 Coordinate:

scaffold_12422:91187-91337 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.6 -12.5 -12.3

Flybase annnotation

CDS [Dana\GF19577-cds]; exon [dana_GLEANR_21745:3]; intron [Dana\GF19577-in]

Repeatable elements

NameClassFamilyStrand
BEL-14_DWil-I-intLTRPao-
mature
  1. dan_339  scaffold_12422:91239-91264 -
  2. scaffold_12984:314702-314727 -
star
  1. scaffold_687:371-397 -
  2. scaffold_688:495-521 -
  3. scaffold_689:659-685 -
  4. scaffold_2845:1008-1034 -
  5. scaffold_11268:233-259 -
  6. dan_339  scaffold_12422:91295-91321 -
  7. scaffold_12675:401-427 -
  8. scaffold_12902:81280-81306 -
  9. scaffold_12911:98482-98508 -
  10. scaffold_12916:7138901-7138927 -
  11. scaffold_12984:314758-314784 -
  12. scaffold_13079:111998-112024 -
  13. scaffold_13082:837691-837717 -
  14. scaffold_13082:1468695-1468721 -
  15. scaffold_13111:1437074-1437100 -
  16. scaffold_13165:496666-496692 -
  17. scaffold_13239:152950-152976 -
  18. scaffold_13250:462584-462610 -
  19. scaffold_13260:475558-475584 -
  20. scaffold_13767:1240939-1240965 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCGAATTTGACAAATACGCACAAATTTCATCATTTGAAATCTCTTCTGATCGACGAGGCTGCGAATCTGGTACGACATTTGGCTATTACGGATTCAGCTTACAACACTGCGTGGGAGCGACTTAATGAAAGGTATAATCGTCCACGGCATATCGTGAATTCACTATTGGAGCAGTTTATGAAGCTGTTAACAACAACCAGGTAGGATACAACAACGCCAATGTAGACGGCGACAATGAAATAGTGCGTGG
******************************************************************..(((.((((....((.((.(((..((.((.(((..((........))..))))).))..))).)).))...)))))))....****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V105
male body		 V039
embryo
 V055
head
..........................................................................................................................................................................................................TAGGATACAACAACGCCAATGTAGACGG..................... 28 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................AGGTAGGATACAACAACGCCAATGC........................... 25 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................GCTGTTAACAACAACCAGGTAGGAT........................................... 25 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................ACAACATCCAGGTAGGGTAAAA....................................... 22 3 1 1.00 1 0 0 0 1 0 0
.................................................................................................................................................................................................ACAACCAGGTAGGATACAACAAC................................... 23 0 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................................................................CAACAACCAGGTAGGATACAACAACGC................................. 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................TAATGAAAGGTATAATCGTCCACGGC...................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................TGAAAGGTATAATCGTCCACGGCATA................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0
..................................................................TCTGGTACGACATTTGGCTATTACGGA.............................................................................................................................................................. 27 0 20 0.40 8 8 0 0 0 0 0
..............................................................................................................................TGAAAGGTTTAATCGTCGA.......................................................................................................... 19 2 3 0.33 1 0 0 0 0 1 0
................................................................................................................................AAAGGTATAATCGACCACCC....................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0
..................................................................TCTGGTACGACATTTGGCTATTACGG............................................................................................................................................................... 26 0 20 0.30 6 6 0 0 0 0 0
...............................................................................................................................................................TTCACTATTGGAGCAGTTTATGAAGC.................................................................. 26 0 20 0.20 4 0 4 0 0 0 0
..............................................................................................TCAGCTTACAACACTGCGTGGG....................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................TACAACACTGCGTGGGAGCGACT................................................................................................................................ 23 0 20 0.15 3 3 0 0 0 0 0
........................................TCTCTTCTGATCGACGAGGCTGCGA.......................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0
......................................................................................................................................................TATCGTGAATTCACTATTGGAGC.............................................................................. 23 0 20 0.15 3 3 0 0 0 0 0
....................................................................................TATTACGGATTCAGCTTACAACACTGC............................................................................................................................................ 27 0 20 0.10 2 0 2 0 0 0 0
........................................TCTCTTCTGATCGACGAGGCTGCGAA......................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
....................................................................................TATTACGGATTCAGCTTACAACACT.............................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
.......................................................................TACGACATTTGGCTATTACGG............................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
....................................................................TGGTACGACATTTGGCTATTACGGAT............................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................TATAATCGTCCACGGCATATCGTGAATT.......................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0
....................................................................................TATTACGGATTCAGCTTACAAC................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
............................................TTCTGATCGACGAGGCTGCGAA......................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...................................................................................CTATTACGGATTCAGCTTACAACAC............................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
..........................................................................GACATTTGGCTATTACGGATTCAG......................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................TATAATCGTCCACGGCATATCGTGAA............................................................................................ 26 0 20 0.05 1 0 0 0 0 0 1
......................................................................TTACGACATTTGGCTATTACGGATTCAG......................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
...............................................................GAATCTGGTACGACATTTGGCTATTA.................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................GCTTACAACACTGCGTGGGAGC.................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0
.......................................................................................TACGGATTCAGCTTACAACACTGC............................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
............................CATCATTTGAAATCTCTTCTGATCGA..................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................ATTCAGCTTACAACACTGCGTGGGA...................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................CAGCTTACAACACTGCGTGGGAGCGA.................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................GAATTCACTATTGGAGCAGTTTATGAAGC.................................................................. 29 0 20 0.05 1 0 1 0 0 0 0
................................................................................TGGCTATTACGGATTCAGCT....................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 1
.....................................................................................ATTACGGATTCAGCTTACAA.................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
..........................................................................GACATTTGGCTATTACGGATTCAGCT....................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.........................................CTCTTCTGATCGACGAGGCTGC............................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................GGCATATCGTGAATTCACTAT.................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
...................................................................................................................................................GCATATCGTGAATTCACTATTGGAGC.............................................................................. 26 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................TCAGCTTACAACACTGCGTCGGAG..................................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0
.................................................................ATCTGGTAGGACATTTGGCTATTAC................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
........................................................................ACGACATTTGGCTATTACGGATTCAGCC....................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
............................................................................CATTTGGCTATTACGGATTCAG......................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0
.......................................................GAGGCTGCGAATCTGGTACG................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CTTACAACACTGCGTGGGAGCGA.................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 1
........................................................................ACGACATTTGGCTATTACGGA.............................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................TGAGCTTACAACACTGCGTGGGAGC.................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................CGTGGGAGCGACTTAATGAAAG....................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0
........................................TCTCTTCTGATCGACGAGGC............................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
........................................TCTCTTCTCATCGACGCGA................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1
........................................TCTCTTCTGATCGACGAGGCTGCG........................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
............................................................................................ATTCAGCTTACAACACTGCGTG......................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...............................................................................TTGGCTATTACGGATTCAGC........................................................................................................................................................ 20 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................ATTCACTATTGGAGCAGTTTATGAA.................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.......................................................................TACGACATTTGGCTATTACGGAT............................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0
................................................................................TGGCTATTACGGATTCAGCTTACA................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................CTGGTACGACATTTGGCTATTACGGA.............................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................TCAGCTTACAACACTTCGTGGGAG..................................................................................................................................... 24 1 20 0.05 1 0 0 0 1 0 0
.............................................TCTGATCGACGGGGCTGCGAATCTTT.................................................................................................................................................................................... 26 3 20 0.05 1 0 0 0 0 1 0
................................................................................................................................................................TCACTATTGGAGCAGTTTATGA..................................................................... 22 0 20 0.05 1 0 0 1 0 0 0
............................................................................CATTTGGCTATTACGGATTCAGC........................................................................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................GAATTCACTATTGGAGCAGTTTATGA..................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...................................................................................CTATTACGGATTCAGCTTACAACACTGC............................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
........................................TCTCTTCTTATCGACGAGGCTGCGAA......................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................TTCACTATTGGAGCAGTTTATGAAGCT................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
...................................................................CTGGTACGACATTTGGCTA..................................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0
............................................................................................ATTCAGCTTACAACACTGCGTGGGAG..................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CCGCTTAAACTGTTTATGCGTGTTTAAAGTAGTAAACTTTAGAGAAGACTAGCTGCTCCGACGCTTAGACCATGCTGTAAACCGATAATGCCTAAGTCGAATGTTGTGACGCACCCTCGCTGAATTACTTTCCATATTAGCAGGTGCCGTATAGCACTTAAGTGATAACCTCGTCAAATACTTCGACAATTGTTGTTGGTCCATCCTATGTTGTTGCGGTTACATCTGCCGCTGTTACTTTATCACGCACC
******************************************************************************************************..(((.((((....((.((.(((..((.((.(((..((........))..))))).))..))).)).))...)))))))....****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
 V055
head
...............................................................................................................................................................................................GTTGTTGGTCCATCCTATGTTG...................................... 22 0 1 2.00 2 2 0 0 0 0 0
.......................TTAAAGTAGTAAACTTTAGAGAAGACT......................................................................................................................................................................................................... 27 0 20 1.20 24 1 20 3 0 0 0
.........................................................................................................................................................................................................................GGTTACATCTGCCGCTGTTACTTTAT........ 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................TGTTGGTCCATCCTATGTTGTTGCGGTT.............................. 28 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................GTCCATCCTATGTTGTTGCGGTTACAT.......................... 27 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................TTACTTTCCATATTAGCAGGTGCCTT..................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
...........................................................................................................GACGCACCCTCGCTGAATTACTTTCCAT.................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0
........................................................TCCGACGCTTAGACCATGCTGTAAA.......................................................................................................................................................................... 25 0 20 0.35 7 3 4 0 0 0 0
..................................................................AGACCATGCTGTAAACCGATAATGCCT.............................................................................................................................................................. 27 0 20 0.35 7 7 0 0 0 0 0
........................TAAAGTAGTAAACTTTAGAGAAGACT......................................................................................................................................................................................................... 26 0 20 0.30 6 0 6 0 0 0 0
...............................................................................................................................................GTGCCGTATAGCACTTAAGTGATAAC.................................................................................. 26 0 20 0.25 5 5 0 0 0 0 0
.....................................................TGCTCCGACGCTTAGACCATG................................................................................................................................................................................. 21 0 20 0.25 5 1 0 0 0 4 0
.......................................................CTCCGACGCTTAGACCATGCTGTAAA.......................................................................................................................................................................... 26 0 20 0.20 4 0 4 0 0 0 0
.................................................TAGCTGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 24 0 20 0.20 4 1 0 0 3 0 0
...............................................................................................................................................GTGCCGTATAGCACTTAAGTGAT..................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0
................................................................................................................................................TGCCGTATAGCACTTAAGTGATAA................................................................................... 24 0 20 0.15 3 2 0 1 0 0 0
..................................................AGCTGCTCCGACGCTTAGACCATGCT............................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0
..........................................................................CTGTAAACCGATAATGCCTAAGTCGAAT..................................................................................................................................................... 28 0 20 0.15 3 1 2 0 0 0 0
................................................CTAGCTGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 25 0 20 0.15 3 0 3 0 0 0 0
................................................................TTAGACCATGCTGTAAACCGATAATGCCT.............................................................................................................................................................. 29 0 20 0.15 3 1 2 0 0 0 0
.................................................................................CCGATAATGCCTAAGTCGAATGTTGTG............................................................................................................................................... 27 0 20 0.15 3 0 3 0 0 0 0
....................................................CTGCTCCGACGCTTAGACCATGCTG.............................................................................................................................................................................. 25 0 20 0.15 3 0 3 0 0 0 0
............................................................................................................................................CAGGTGCCGTATAGCACTTAAGTGAT..................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0
......................................................................................................GTTGTGACGCACCCTCGCTGAATTACT.......................................................................................................................... 27 0 20 0.15 3 3 0 0 0 0 0
.............................................................................................................................................AGGTGCCGTATAGCACTTAAGTGAT..................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................................................................................................CTCGTGACATACTTCAACAAT............................................................. 21 3 8 0.13 1 0 0 0 0 0 1
......................................................GCTCCGACGCTTAGACCATGC................................................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................GACGCACCCTCGCTGAATTACT.......................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
....................................................CTGCTCCGACGCTTAGACCATGCTGT............................................................................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0
.........................................................CCGACGCTTAGACCATGCTGTAAACCG....................................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0 0
...............................................ACTAGCTGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 26 0 20 0.10 2 1 1 0 0 0 0
.........................................................................GCTGTAAACCGATAATGCCTAAGTCGAAT..................................................................................................................................................... 29 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................TGCCGTATAGCACTTAAGTGATAACC................................................................................. 26 0 20 0.10 2 1 0 1 0 0 0
..............................................................................................................................................GGTGCCGTATAGCACTTAAGTGATA.................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
............................................................ACGCTTAGACCATGCTGTAAACCGAT..................................................................................................................................................................... 26 0 20 0.10 2 1 0 0 1 0 0
......................................................GCTCCGACGCTTAGACCATGCTGT............................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
................................................................TTAGACCATGCTGTAAACCGATAAT.................................................................................................................................................................. 25 0 20 0.10 2 0 0 1 0 1 0
..........................................................................................................TGACGCACCCTCGCTGAATTACT.......................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................GCAGGTGCCGTATAGCACTTAAGTGA...................................................................................... 26 0 20 0.10 2 1 1 0 0 0 0
..........................................................................................................TGACGCACCCTCGCTGAATTACTTT........................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0
..............................................................................AAACCGATAATGCCTAAGTCGAATGT................................................................................................................................................... 26 0 20 0.10 2 1 1 0 0 0 0
.................................................................TAGACCATGCTGTAAACCGATAAT.................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
............................................................ACGCTTAGACCATGCTGTAAA.......................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
............................................................................GTAAACCGATAATGCCTAAGTCGAAT..................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................GCAGGTGCCGTATAGCACTTAAGTGAT..................................................................................... 27 0 20 0.10 2 1 0 0 1 0 0
.................................................................................................CGAATGTTGTGACGCACCCTCGCTGAA............................................................................................................................... 27 0 20 0.10 2 1 1 0 0 0 0
.....................................................................CCATGCTGTAAACCGATAATGCCTAA............................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
........................................................TCCGACGCTTAGACCATGCTGTAAAC......................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
.....................................................TGCTCCGACGCTTAGACCATGCTGTAA........................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
....................................................................................ATAATGCCTAAGTCGAATGTTGTGAC............................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................TGTGACGCACCCTCGATGAATTACTT......................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................TGCCGTATAGCACTTAAGTGATG.................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.....................................................TGCTCCGACGCTTAGACCATGCT............................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................CTCGTCCAATACTTCGACGAT............................................................. 21 2 20 0.05 1 0 0 0 0 0 1
.........CTGTTTATGCGTGTTTAAAGTAGTAAA....................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................GCCGTATAGCACTTAAGTGATAACC................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
....................................................................................ATAATGCCTAAGTCGAATGTTG................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
........................................................TCCGACGCTTAGACCATGCTG.............................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................GCAGGTGCAGTATAGCACTTAAGTGAT..................................................................................... 27 1 20 0.05 1 0 0 1 0 0 0
......................................................................CATGCTGTAAACCGATAATGCCTAAGT.......................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................AGTCGAATGTTGTGACGCACCCTCGCT.................................................................................................................................. 27 0 20 0.05 1 0 0 1 0 0 0
.............................................................................................................CGCACCCTCGCTGAATTACTT......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................CCTAAGTCGAATGTTGTGACGCATC........................................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0
......................................................................................AATGCCTAAGTCGAATGTGGTGACGCA.......................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.....................................................TGCTCCGACGCTTAGACCATGCTGT............................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................ATATTAGCAGGTGCCGTATAGCACTT............................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
..............TATGTGTGTTTCAAGTGGTAA........................................................................................................................................................................................................................ 21 3 20 0.05 1 0 0 0 1 0 0
............................................................................................................................................CAGGTGCCGTATAGCACTTAATTGAT..................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................TGCCGTATAGCACTTAAGTGATAAC.................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................ATAGCACTTAAGTGATAACCTCGTCAAAT........................................................................ 29 0 20 0.05 1 0 1 0 0 0 0
..............................................GAATAGCTGCTCCGACGCTTAAACCAT.................................................................................................................................................................................. 27 2 20 0.05 1 1 0 0 0 0 0
.................................................................................CCGATAATGCCTAAGTCGAATGTTTT................................................................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
..................................................................AGACCATGCTGTAAACCGATAATGCCTA............................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
....................................................................................ATAATGCCTAAGTCGAATGTTGTGACG............................................................................................................................................ 27 0 20 0.05 1 0 1 0 0 0 0
................................................CTAGCTGCTCCGACGCTTAGGCCAT.................................................................................................................................................................................. 25 1 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................GCCGTATAGCACTTAAGTGATAACCT................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................CCGTATAGCACTTAAGTGATAACC................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0
.........................................................CCGACGGTTAAACCATGCTGTAAACCGCT..................................................................................................................................................................... 29 3 20 0.05 1 0 1 0 0 0 0
................................................................TTAGACCATGCTGTAAACCGATAATGC................................................................................................................................................................ 27 0 20 0.05 1 0 0 0 0 1 0
......................................................GCTCCGACGCTTAGACCATGCTGTAAA.......................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................TAGCACTTAAGTGATAACCTCGTCAAAT........................................................................ 28 0 20 0.05 1 0 1 0 0 0 0
.................................................................................CCGATAATGCCTAAGTCGAATGTT.................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
............................................................................GTAAACCGATAATGCCTAAGTCGAATGTT.................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................CCTAAGTCGAATGTTGTGACGCACC........................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................AGGTCGATTGTTGTGACGGA.......................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1
........................................................CCCGACGCTTAGACCATGCTGTAAA.......................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
................................................CTAGCTGCTCCGACGCTTAGACCATG................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................CCGTATAGCACTTAAGTGATAA................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
......................................................GCTCCGACGCTTAGACCATGCTGTA............................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
.................................................................TAGACCATGCTGTAAACAGATAATGCCT.............................................................................................................................................................. 28 1 20 0.05 1 0 1 0 0 0 0
.............................................................CGCTTAGACCATGCTGTAAAC......................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..............................AGTAAACTTTAGAGAAGAGTAGCTGCT.................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
..................................................AGCTGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
........................................................CCCGACGCTTAGACCATGCTGTAAAC......................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
....................................................................ACCATGCTGTAAACCGATAATGCC............................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
....................................................CTGCTCCGACGCTTAGACCATGCG............................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
....................................................................................ATAATGCCTAAGTCGAATGTT.................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
.....................................................................CCATGCTGTAAACCGATAAT.................................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
........................................AGAGAAGACTAGCTGCTCCGA.............................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0 0
.......................................................CTCCGACGCTTAGACCATGCTGTAA........................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................CTCGTGCAATACTTCGACGAT............................................................. 21 3 20 0.05 1 0 0 0 0 0 1
................................................................TTAGACCATGCTGTAAACCGATAATG................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................TGTGACGCACCCTCGCTGAATTACTTT........................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................TGACGCACCCTCGCCGAATTACT.......................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................GTGACGCACCCTCGCTGAATTACT.......................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
........................................................CCCGACGCTTAGACCATGCTGAAAA.......................................................................................................................................................................... 25 2 20 0.05 1 0 1 0 0 0 0
..........................AAGTAGTAAACTTTAGAGAAGACTA........................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
..................................................AGCTGCTCCGACGCTTAGACCATGCTG.............................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................TGGTGCCGTATAGCACTTAAGTGATA.................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0
..................................................................................CGATAATGCCTAAGTCGAATGTTGT................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
..........................................................TGACGCTTAGACCATGCTGTAA........................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 1 0
......................................................GCTCCGACGCTTAGACAATGCTGTA............................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0
..................................................AGCTGCTCCGACGCTTAGACCATGCTGT............................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
.............................TAGTAAACTTTAGAGAAGACTAGCTGC................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................TGCCGTATAGCACTTAAGTGATAACCT................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................GCCTAAGTCGAATGTTGTGACGCAC......................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
................................................................TTAGACCATGCTGTAAACCGATAAGGCC............................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TGTTGTGACGCACCCTCGCTGAATT............................................................................................................................. 25 0 20 0.05 1 0 0 1 0 0 0
........................................................TCCGACGCTTAGACCATGCTGT............................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................GTCGATTGGTGTGACGCA.......................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 1
....................................................CTGCTCCGACGCTTAGACCATGCTGTA............................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................TCCGTATAGCACTTAAGTGATAACCT................................................................................ 26 1 20 0.05 1 0 0 0 1 0 0
.....................................................................................................................................ATATTAGCAGGTGCCGTATAGCA............................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
...........................................GAAGACTAGCTGCTCCGACGC........................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0
.................................................................................................................................................GCCGTATAGCACTTAAGTGATAA................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...............................................ACTAGCTGCTCCGACGCTTAGACCATGCT............................................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
.........................................................................GCTGTAAACCGATAATGCCTAAGT.......................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..............................................GACTAGCTGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
...................................................................GACCATGCTGTAAACCGATAATGCCT.............................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
...............................................ACTAGCTGCTCCGACGCGTAGACCAT.................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................CACTTAAGTGATAACCTCGTCAAATACT..................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
..........................................................CGACGCTTAGACCATGCTGTAAACCGAT..................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..............................AGTAAACTTTAGAGAAGACTAGCTGCT.................................................................................................................................................................................................. 27 0 20 0.05 1 0 0 1 0 0 0
................................................................................ACCGATAATGCCTAAGTCGAATGTTGT................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
.......................TTAAAGTAGTAAACTTTAGAGAACAC.......................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
............................................AAGACTAGCTGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0
.......................TTAAAGTAGTAAACTTTAGAGAAGAC.......................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................AGCACTTAAGTGATAACCTCGTCAAAT........................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................GTGCCGTATAGCACTTAAGTGATAA................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.....................................................CGCTCCGACGCTTAGACCAT.................................................................................................................................................................................. 20 1 20 0.05 1 0 1 0 0 0 0
..............................................................GCTTAGACCATGCTGTAAACCGATAAT.................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................TAGACCATGCTGTAAACCGATAATGACT.............................................................................................................................................................. 28 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12422:91137-91387 - dan_339 GGCGAATTTGACAAATACGCACAAATTTCATCATTTGAAATCTCTTCTGATCGACGAGGCTGCGAATCTGGTACGACATTTGGCTATTACGGATTCAGCTTACAACACTGCGTGGGAGCGACTTAATGAAAGGTATAATCGTCCACGGCATATCGTGAATTCACTATTGGAGCAGTTTATGAAGCTGTTAACAACAACCAGGTAGGATACAACAACG-CCAATG-------TAGACGGCGACAATGAAATAGTGCGTGG
droBip1 scf7180000396574:502024-502281 - GACGAATTTGACAAATACGCACGAATTTCATCATCTGAAATCTCTTCTAATCGACGAAGCTGCGAACTTGGTGCGACATCTAACTATTACGGATGCAGCTTACAACACAGCGTGGGAGCGACTTAATGAAAGATATAATTGTCCACGGCACATCGTGAATTTATTCATGGAGCAGTTTATAAAGCTGCCAACAACAACAAGGTCTGATGCAGCAACC-TTGAGGAAGGTGTTAGACGGCGCAAACGAAATCGTGCGGGG
droFic1 scf7180000449564:1706-1962 + GACCCACCTGGGAAAGATTCAGAAGTTTCACTACCTTAAGTCTTTCATAGTTGGTGAAGCGGCCAATCTTCTCAGTCACATGTCCATTACGGAATCAGCTTATGATTCAGCATGGGAACG-CTCAATGATCGCTATGATCGCCCAAGACATATCGTGAACTCCTTACTGGACACTTTCATGGCACTGGCTGCTGCCCCCAACGGCGAGGTGTCTAAT-CTACGCAAACTTACTGATGGCGCCAATGAAATCATTCGTGG
droEle1 scf7180000491238:1410448-1410705 - GCAGCATCTGTCCAACACTTAGAAATTTCATCACTTGAAAATACTTCTTGTAGCTGATGCTGCCAACTTAGTGCGACACCTGACTATTACTAATTCGGCTTATAAAACTGCGTGGGATCGTCTCAAGGAAACGTACAATCGTCCTCGGCACATTGTTAATACATTTTTAGAACAATTTATGAGCTTGCAAACTACCAGTAAAATTGATGCAACAACC-TTATGCAAGGTGTCTGATTGAGCAAACCAAATTGTTCGCGG
droRho1 scf7180000763033:235-492 + GCAACATTTGTCCAACACACAGAAGTTCCATCACTTGAAAACACTTATTGTTGATGAGGCTGCCAACTTGGTACGGCATTTGGCCATTACGGATACAGCTTACAACACCGCTTGGGAACGTCTGAAAGAAAGGTACAATCGTCCACGGCACATTGTAAACTCATTTTTGGAGCAGTTTATGAACCTGCCAACAACTACAAAGGTAGATGCATCAATT-CTACGGAAGGTGTCAGACGGAGCAAACGAAATTATTCGCGG
droBia1 scf7180000302422:1321264-1321521 + ACAGCATTTGTCCAACACCCAGAAATTCCATCACTTGAAAACACTTCTCGTTGATGAGGCTGCCAACTTAGTGCGACACTTGGCCATCACTGACACGGCGTACAATACTGCATGGGAACGTCTTAAGGAAAGGTACAATCGTCCTCGGCACATTGTAAACTCATTTTTGGAGCAGTTTATGAGCCTGCCAACAACTACAAAGATGGATGCAACAGTC-CTACGGAAGGTCTCAGACGGAGCAAACGAAATTGTTCGTGG
droTak1 scf7180000410329:14447-14704 + GCAGCATTTGTCCAACACACAGAAGTTCCATCACTTGAAAACACTTCTTGTTGATGAGGCTGCCAACTTGGTACGGCACTTGGCCATTACGGAGACTGCTTACAACACAGCTTGGGAACGTCTTAAGGAGAGGTACAATCGTCCACGGCACATTGTAAACTCATTTTTGGAGCAGTTTATGAGCCTACCAACAACTACAAAGGTAGATGCATCAATT-CTACGGAAGGTGTCAGACGGAGCAAACGAAATTGTTCGCGG
droEug1 scf7180000409837:12024-12266 + GGCCAATTTAACAAATACACACAAGTTTCATCTTCTGAAATCTCTTCTTGTTGACGAAGCTGCAAGTTTGGGGCG-CATCTAACTATTGCGGATGCAACTTACAACACAGCGTGGCAGCGACCTAATGAAAGATATAATCTTCCG-----CATCGTGAATTCATTTATGGAGCAGTTTAAGAAGCTGCCAACAACAACAAGGTCTGATGCAGCAATC-TTGTGGAAGGTGTCAGATGGCGCATTCG---------GCGG
dm3 chrU:2777326-2777462 + GCAGCACTTGACGTAGATTGAGAACTATCACTATTTAAAGCCGTACATCACAGGAGATTCTGCTGATTAAATACCTCACATGCCCATTAAGGACATAGCTTTTGGCACTGCCTCGTCATGTTTGATTGAAAACCATA--------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr3h_random_002:66727-66974 + GCAGAACTCGACGGACATTAAGAAGTATGATTATTTATCA-TGTACATCACGGGAGATGTTCATGATTTAATACGTCGCATGCCTATTATGGACTTTGCTTACGGTACTGCCTAGGCATGTTTTATTGAAC--------TGTACTCGCCACATTGTGAACACTCTGCTAAATATATTTGTAAACTCACCTTTCACTAGCTAAGCTAAAGTCACAATT-CTGCAT-AGGTAACAGATGTAGCTACTATAATTGTACGCTG
droEre2 scaffold_4929:24810680-24810922 - CCAGCACTTGACGGATATCCAGAGGTATCACTATTTAAAGTCGTACATCACGGGAAGTGCTGCTGATTTAATACTTCACATGCCTATTAAGTACTTAGATTACGGTACTT-TTGGACATGATTATTTTAACGCTGCAACCTTCCTCGACACATTGTTAAGACTTTGCTAGATACATTTGTAAGCTTACCTTTGACTAGCAAA--------------G-CTGCGTAAGGTAACGGGTGGAGCTACTAAACTTGTACGCGG
dp5 Unknown_group_124:7164-7422 - GCAGCATTTGACGAACACACAGAAGTTTCATCATTTGAAAACACTTCTTATCGATGAGGCTGCCAACTTGGTACGACAGTTGACGATCACTGACACTGCTTACAACACTGCATGGGAACGTCTCAAGGAAAGGTACAATCGGCCGAGGCATATCATAAATTCGTTTTTGGAACAATAAATGGGATTGCCCACAACTACTACAGTTACTGCGGCGATTGATGCGTAAAGTGTCTGACGGTGCAAACGAAATTGTACGTGG
droPer2 scaffold_570:5110-5367 - GCAGCATTTGACGAGCACACAGAAGTTTCATCATTTGAAAACACTACTTATCGATGAGGATGCCAACTTGGTACGACATTTGGCGATCCCGGACACTGCTTACAACACTGCATGGGAACGTCTCAAGGAAAGGTACAATCGGCCGAGGCATATCGTAAACTCGTTTTTGGAACAATTTATGAGGTTGCCCACAACTACTAAAATTGATGCGGCGATT-TTGCGTAAAGTGTCCGACAGTGCAAACGAAATTGTACGTGG
droWil2 scf2_1100000005466:167-423 - AAGGGAGTTAACCAACACTCAAAAGTTTCATCATTTAAAAACACTGCTCGTCGATGATGCTGCCAACTTGGTGCGGCACCTGGCGATAACTGACACGGCTTACAACACTGCTTGGGAACG-CTTAAGGAAAGATACAATAGGCCACGCCATATTGTGAACTCATTTTTGGAGAAATTTATGGGTCTACCAACGACAAACAAAATTGATGTGTCCATC-TTACGCAAGGTATCAGATGGCACAAATGAGATTGTTCGCGG
droVir3 scaffold_12728:466091-466285 - AAAACATTTGAAAACAGCTCAAAAATTGCATTTCTTAAAGACTTTTTCGTCTAATGAAGAAGCTTGCGCAATATGACATTTGCCAAATACAGACTCGG--TATTATACTGGATGGGAAGGCCTAATTGAACGATACAACCGACCACCTCCTGTCGATAAATCAATTATGAAGGCCTTAATGGAGTTGCCAACAACGA--------------------------------------------------------------
droMoj3 scaffold_6495:78616-78863 - GACAACGTTGTCGAATATTCAGAAGTATCATCATTTAAAATCTTGTTTAAAAGGAGAAGCTGCGAAACTTATTCAGCATCTGCCCTTAGCCGATGCCAACAATGTGATAGCTTTGAATTCATTAGTTGATCGGTACGAGAAGCCTCGCTATTTGGTAAACGTGTTGTTGGATACATTTACTGGACTGTGGATCAAAACC----------CAGCATCG-CTTCGATCGCTAACAAACGAAGCTGGTACCGTAATTCGGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGCGAATTTGACAAATACGCACAAATTTCATCATTTGAAATCTCTTCTGATCGACGAGGCTGCGAATCTGGTACGACATTTGGCTATTACGGATTCAGCTTACAACACTGCGTGGGAGCGACTTAATGAAAGGTATAATCGTCCACGGCATATCGTGAATTCACTATTGGAGCAGTTTATGAAGCTGTTAACAACAACCAGGTAGGATACAACAACG-CCAATG-------TAGACGGCGACAATGAAATAGTGCGTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................TAGGATACAACAACG-CCAATG-------TAGACGG.....................2811.001100000
.......................................................................................................................................................................................................AGGTAGGATACAACAACG-CCAATG-------C...........................2511.001010000
.......................................................................................................................................................................................GCTGTTAACAACAACCAGGTAGGAT...................................................2511.001010000
.................................................................................................................................................................................................ACAACCAGGTAGGATACAACAAC...........................................2311.001000001
...............................................................................................................................................................................................CAACAACCAGGTAGGATACAACAACG-C........................................2711.001100000
...........................................................................................................................TAATGAAAGGTATAATCGTCCACGGC..............................................................................................................2620.501010000
..............................................................................................................................TGAAAGGTATAATCGTCCACGGCATA...........................................................................................................2620.501010000
..................................................................TCTGGTACGACATTTGGCTATTACGGA......................................................................................................................................................................27200.408800000
..................................................................TCTGGTACGACATTTGGCTATTACGG.......................................................................................................................................................................26200.306600000
...............................................................................................................................................................TTCACTATTGGAGCAGTTTATGAAGC..........................................................................26200.204040000
..............................................................................................TCAGCTTACAACACTGCGTGGG...............................................................................................................................................22200.153300000
....................................................................................................TACAACACTGCGTGGGAGCGACT........................................................................................................................................23200.153300000
........................................TCTCTTCTGATCGACGAGGCTGCGA..................................................................................................................................................................................................25200.153300000
......................................................................................................................................................TATCGTGAATTCACTATTGGAGC......................................................................................23200.153300000
....................................................................................TATTACGGATTCAGCTTACAACACTGC....................................................................................................................................................27200.102020000
........................................TCTCTTCTGATCGACGAGGCTGCGAA.................................................................................................................................................................................................26200.102200000
....................................................................................TATTACGGATTCAGCTTACAACACT......................................................................................................................................................25200.102200000
.......................................................................TACGACATTTGGCTATTACGG.......................................................................................................................................................................21200.102200000
....................................................................TGGTACGACATTTGGCTATTACGGAT.....................................................................................................................................................................26200.102200000
.....................................................................................................................................TATAATCGTCCACGGCATATCGTGAATT..................................................................................................28200.102200000
....................................................................................TATTACGGATTCAGCTTACAAC.........................................................................................................................................................22200.051000001
............................................TTCTGATCGACGAGGCTGCGAA.................................................................................................................................................................................................22200.051100000
...................................................................................CTATTACGGATTCAGCTTACAACAC.......................................................................................................................................................25200.051010000
..........................................................................GACATTTGGCTATTACGGATTCAG.................................................................................................................................................................24200.051100000
.....................................................................................................................................TATAATCGTCCACGGCATATCGTGAA....................................................................................................26200.051000100
...............................................................GAATCTGGTACGACATTTGGCTATTA..........................................................................................................................................................................26200.051010000
.................................................................................................GCTTACAACACTGCGTGGGAGC............................................................................................................................................22200.051000010
.......................................................................................TACGGATTCAGCTTACAACACTGC....................................................................................................................................................24200.051100000
............................CATCATTTGAAATCTCTTCTGATCGA.............................................................................................................................................................................................................26200.051100000
............................................................................................ATTCAGCTTACAACACTGCGTGGGA..............................................................................................................................................25200.051010000
...............................................................................................CAGCTTACAACACTGCGTGGGAGCGA..........................................................................................................................................26200.051100000
............................................................................................................................................................GAATTCACTATTGGAGCAGTTTATGAAGC..........................................................................29200.051010000
................................................................................TGGCTATTACGGATTCAGCT...............................................................................................................................................................20200.051000100
.....................................................................................ATTACGGATTCAGCTTACAA..........................................................................................................................................................20200.051000001
..........................................................................GACATTTGGCTATTACGGATTCAGCT...............................................................................................................................................................26200.051100000
.........................................CTCTTCTGATCGACGAGGCTGC....................................................................................................................................................................................................22200.051010000
..................................................................................................................................................GGCATATCGTGAATTCACTAT............................................................................................21200.051000001
...................................................................................................................................................GCATATCGTGAATTCACTATTGGAGC......................................................................................26200.051000001
........................................................................ACGACATTTGGCTATTACGGATTCAGCC...............................................................................................................................................................28200.051010000
............................................................................CATTTGGCTATTACGGATTCAG.................................................................................................................................................................22200.051000010
.......................................................GAGGCTGCGAATCTGGTACG........................................................................................................................................................................................20200.051100000
..................................................................................................CTTACAACACTGCGTGGGAGCGA..........................................................................................................................................23200.051000100
........................................................................ACGACATTTGGCTATTACGGA......................................................................................................................................................................21200.051000001
..............................................................................................................CGTGGGAGCGACTTAATGAAAG...............................................................................................................................22200.051000001
........................................TCTCTTCTGATCGACGAGGC.......................................................................................................................................................................................................20200.051100000
........................................TCTCTTCTGATCGACGAGGCTGCG...................................................................................................................................................................................................24200.051100000
............................................................................................ATTCAGCTTACAACACTGCGTG.................................................................................................................................................22200.051100000
...............................................................................TTGGCTATTACGGATTCAGC................................................................................................................................................................20200.051000001
..............................................................................................................................................................ATTCACTATTGGAGCAGTTTATGAA............................................................................25200.051100000
.......................................................................TACGACATTTGGCTATTACGGAT.....................................................................................................................................................................23200.051010000
................................................................................TGGCTATTACGGATTCAGCTTACA...........................................................................................................................................................24200.051100000
...................................................................CTGGTACGACATTTGGCTATTACGGA......................................................................................................................................................................26200.051100000
................................................................................................................................................................TCACTATTGGAGCAGTTTATGA.............................................................................22200.051000001
............................................................................CATTTGGCTATTACGGATTCAGC................................................................................................................................................................23200.051010000
............................................................................................................................................................GAATTCACTATTGGAGCAGTTTATGA.............................................................................26200.051100000
...................................................................................CTATTACGGATTCAGCTTACAACACTGC....................................................................................................................................................28200.051100000
...............................................................................................................................................................TTCACTATTGGAGCAGTTTATGAAGCT.........................................................................27200.051100000
...................................................................CTGGTACGACATTTGGCTA.............................................................................................................................................................................19200.051000001
............................................................................................ATTCAGCTTACAACACTGCGTGGGAG.............................................................................................................................................26200.051100000
droBip1
GACGAATTTGACAAATACGCACGAATTTCATCATCTGAAATCTCTTCTAATCGACGAAGCTGCGAACTTGGTGCGACATCTAACTATTACGGATGCAGCTTACAACACAGCGTGGGAGCGACTTAATGAAAGATATAATTGTCCACGGCACATCGTGAATTTATTCATGGAGCAGTTTATAAAGCTGCCAACAACAACAAGGTCTGATGCAGCAACC-TTGAGGAAGGTGTTAGACGGCGCAAACGAAATCGTGCGGGGSizeHit CountTotal NormTotal
No Reads
droFic1
GACCCACCTGGGAAAGATTCAGAAGTTTCACTACCTTAAGTCTTTCATAGTTGGTGAAGCGGCCAATCTTCTCAGTCACATGTCCATTACGGAATCAGCTTATGATTCAGCATGGGAACG-CTCAATGATCGCTATGATCGCCCAAGACATATCGTGAACTCCTTACTGGACACTTTCATGGCACTGGCTGCTGCCCCCAACGGCGAGGTGTCTAAT-CTACGCAAACTTACTGATGGCGCCAATGAAATCATTCGTGGSizeHit CountTotal NormTotal
No Reads
droEle1
GCAGCATCTGTCCAACACTTAGAAATTTCATCACTTGAAAATACTTCTTGTAGCTGATGCTGCCAACTTAGTGCGACACCTGACTATTACTAATTCGGCTTATAAAACTGCGTGGGATCGTCTCAAGGAAACGTACAATCGTCCTCGGCACATTGTTAATACATTTTTAGAACAATTTATGAGCTTGCAAACTACCAGTAAAATTGATGCAACAACC-TTATGCAAGGTGTCTGATTGAGCAAACCAAATTGTTCGCGGSizeHit CountTotal NormTotal
No Reads
droRho1
GCAACATTTGTCCAACACACAGAAGTTCCATCACTTGAAAACACTTATTGTTGATGAGGCTGCCAACTTGGTACGGCATTTGGCCATTACGGATACAGCTTACAACACCGCTTGGGAACGTCTGAAAGAAAGGTACAATCGTCCACGGCACATTGTAAACTCATTTTTGGAGCAGTTTATGAACCTGCCAACAACTACAAAGGTAGATGCATCAATT-CTACGGAAGGTGTCAGACGGAGCAAACGAAATTATTCGCGGSizeHit CountTotal NormTotal
No Reads
droBia1
ACAGCATTTGTCCAACACCCAGAAATTCCATCACTTGAAAACACTTCTCGTTGATGAGGCTGCCAACTTAGTGCGACACTTGGCCATCACTGACACGGCGTACAATACTGCATGGGAACGTCTTAAGGAAAGGTACAATCGTCCTCGGCACATTGTAAACTCATTTTTGGAGCAGTTTATGAGCCTGCCAACAACTACAAAGATGGATGCAACAGTC-CTACGGAAGGTCTCAGACGGAGCAAACGAAATTGTTCGTGGSizeHit CountTotal NormTotal
No Reads
droTak1
GCAGCATTTGTCCAACACACAGAAGTTCCATCACTTGAAAACACTTCTTGTTGATGAGGCTGCCAACTTGGTACGGCACTTGGCCATTACGGAGACTGCTTACAACACAGCTTGGGAACGTCTTAAGGAGAGGTACAATCGTCCACGGCACATTGTAAACTCATTTTTGGAGCAGTTTATGAGCCTACCAACAACTACAAAGGTAGATGCATCAATT-CTACGGAAGGTGTCAGACGGAGCAAACGAAATTGTTCGCGGSizeHit CountTotal NormTotal
No Reads
droEug1
GGCCAATTTAACAAATACACACAAGTTTCATCTTCTGAAATCTCTTCTTGTTGACGAAGCTGCAAGTTTGGGGCG-CATCTAACTATTGCGGATGCAACTTACAACACAGCGTGGCAGCGACCTAATGAAAGATATAATCTTCCG-----CATCGTGAATTCATTTATGGAGCAGTTTAAGAAGCTGCCAACAACAACAAGGTCTGATGCAGCAATC-TTGTGGAAGGTGTCAGATGGCGCATTCG---------GCGGSizeHit CountTotal NormTotal
No Reads
dm3
GCAGCACTTGACGTAGATTGAGAACTATCACTATTTAAAGCCGTACATCACAGGAGATTCTGCTGATTAAATACCTCACATGCCCATTAAGGACATAGCTTTTGGCACTGCCTCGTCATGTTTGATTGAAAACCATA--------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droYak3
GCAGAACTCGACGGACATTAAGAAGTATGATTATTTATCA-TGTACATCACGGGAGATGTTCATGATTTAATACGTCGCATGCCTATTATGGACTTTGCTTACGGTACTGCCTAGGCATGTTTTATTGAAC--------TGTACTCGCCACATTGTGAACACTCTGCTAAATATATTTGTAAACTCACCTTTCACTAGCTAAGCTAAAGTCACAATT-CTGCAT-AGGTAACAGATGTAGCTACTATAATTGTACGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CCAGCACTTGACGGATATCCAGAGGTATCACTATTTAAAGTCGTACATCACGGGAAGTGCTGCTGATTTAATACTTCACATGCCTATTAAGTACTTAGATTACGGTACTT-TTGGACATGATTATTTTAACGCTGCAACCTTCCTCGACACATTGTTAAGACTTTGCTAGATACATTTGTAAGCTTACCTTTGACTAGCAAA--------------G-CTGCGTAAGGTAACGGGTGGAGCTACTAAACTTGTACGCGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
GCAGCATTTGACGAACACACAGAAGTTTCATCATTTGAAAACACTTCTTATCGATGAGGCTGCCAACTTGGTACGACAGTTGACGATCACTGACACTGCTTACAACACTGCATGGGAACGTCTCAAGGAAAGGTACAATCGGCCGAGGCATATCATAAATTCGTTTTTGGAACAATAAATGGGATTGCCCACAACTACTACAGTTACTGCGGCGATTGATGCGTAAAGTGTCTGACGGTGCAAACGAAATTGTACGTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................TCTCAAGGAAAGGTACAATCGGC....................................................................................................................23433.00132011950100700
........................................................................................................................TCTCAAGGAAAGGTACAATCGG.....................................................................................................................22418.257307110000010
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCC...................................................................................................................24415.506225910000000
...............................................................................................................................GAAAGGTACAATCGGCCGAGG...............................................................................................................2149.253703510000100
...............................................................................................................................GAAAGGTACAATCGGCCGAGGC..............................................................................................................2246.752702240000100
............................................................................................ACACTGCTTACAACACTGCATGG................................................................................................................................................2335.331601310000110
..............ACACACAGAAGTTTCATCATTTG..............................................................................................................................................................................................................................2334.331301210000000
........................................................................................................................TCTCAAGGAAAGGTACAATCG......................................................................................................................2142.751101100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCGAGG...............................................................................................................2342.2590900000000
..................................................................CTTGGTACGACAGTTGACGATCAC.........................................................................................................................................................................2412.0020200000000
..............................................................................................................................................................................................ACAACTACTACAGTTACTGCGG...............................................2212.0020100100000
............................................................................................ACACTGCTTACAACACTGCATG.................................................................................................................................................2232.0060200000400
..............................................................................................................................................................................................ACAACTACTACAGTTACTGCGGCGA............................................2512.0020200000000
................................................................................TGACGATCACTGACACTGCTTACAACAC.......................................................................................................................................................2812.0020200000000
..............................................................................................................................................................................................ACAACTACTACAGTTACTGCGGCG.............................................2412.0020200000000
...............................................................................................................................GAAAGGTACAATCGGCCGAGGCATA...........................................................................................................2541.7570500000200
.........................................................................................................................CTCAAGGAAAGGTACAATCGG.....................................................................................................................2141.7570700000000
..............ACACACAGAAGTTTCATCATTTGA.............................................................................................................................................................................................................................2431.6750220000010
...............................................................................................................................GAAAGGTACAATCGGCCGAGGCATAT..........................................................................................................2641.5060200000220
...............................................................................................................................GAAAGGTACAATCGGCCGAGGCA.............................................................................................................2341.5060500000100
.........................................................................................................................CTCAAGGAAAGGTACAATCGGC....................................................................................................................2241.5060600000000
..............ACACACAGAAGTTTCATCATTTGAA............................................................................................................................................................................................................................2531.3340400000000
..............ACACACAGAAGTTTCATCATTTGAAAA..........................................................................................................................................................................................................................2731.3340220000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCCG..................................................................................................................2541.2550500000000
...............................................................................................................................GAAAGGTACAATCGGCCGAGGCAT............................................................................................................2441.2550200000300
....................................................................TGGTACGACAGTTGACGATCACTGAC.....................................................................................................................................................................2611.0010100000000
.......................................................GAGGCTGCCAACTTGGTACGACAG....................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................ACAACTACTACAGTTACTGCGGCGAT...........................................2611.0010100000000
..............ACACACAGAAGTTTCATCATTTGAAA...........................................................................................................................................................................................................................2631.0030300000000
.............AACACACAGAAGTTTCATCATT................................................................................................................................................................................................................................2231.0030100000200
........................................ACACTTCTTATCGATGAGGCTGC....................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................TAAATTCGTTTTTGGAACAATAAATG..............................................................................2611.0010000000010
............................................................................................ACACTGCTTACAACACTGCATGGG...............................................................................................................................................2431.0030300000000
.......................................................................TACGACAGTTGACGATCACTGACAC...................................................................................................................................................................2511.0010100000000
..............................................................................................................................................................................................ACAACTACTACAGTTACTGCGGCA.............................................2411.0010100000000
..............................................................................................................................................................................................ACAACTACTACAGTTACTGCGGC..............................................2311.0010100000000
...............................................................................................................................................................................................CAACTACTACAGTTACTGCGGCGA............................................2411.0010100000000
...............CACACAGAAGTTTCATCATTTG..............................................................................................................................................................................................................................2231.0030300000000
........................................ACACTTCTTATCGATGAGGCTGCC...................................................................................................................................................................................................2411.0010000010000
...............................................................................................................................................................................................CAACTACTACAGTTACTGCGGCG.............................................2311.0010100000000
..............ACACACAGAAGTTTCATCATTT...............................................................................................................................................................................................................................2231.0030300000000
............................................................................CAGTTGACGATCACTGACACTGCTT..............................................................................................................................................................2511.0010100000000
...............................................TTATCGATGAGGCTGCCAACTTGGTAC.........................................................................................................................................................................................2721.0020200000000
....................................................................TGGTACGACAGTTGACGATCACTGACA....................................................................................................................................................................2711.0010100000000
................................................TATCGATGAGGCTGCCAACTTGGTA..........................................................................................................................................................................................2521.0020100000100
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCCGA.................................................................................................................2640.7530300000000
................................................................................................................................AAAGGTACAATCGGCCGAGGC..............................................................................................................2140.7530300000000
.............AACACACAGAAGTTTCATCATTTGA.............................................................................................................................................................................................................................2530.6720000000200
...............CACACAGAAGTTTCATCATTTGA.............................................................................................................................................................................................................................2330.6720200000000
.............AACACACAGAAGTTTCATCATTTG..............................................................................................................................................................................................................................2430.6720200000000
..............................................................................................ACTGCTTACAACACTGCATGGGA..............................................................................................................................................2330.6720100100000
..............ACACACAGAAGTTTCATCATT................................................................................................................................................................................................................................2130.6720200000000
............................................................................................ACACTGCTTACAACACTGCATGGGA..............................................................................................................................................2530.6720200000000
..........................................................................................................................TCAAGGAAAGGTACAATCGGCCGAG................................................................................................................2540.5020200000000
.........................................................................................................................CTCAAGGAAAGGTACAATCGGCC...................................................................................................................2340.5020200000000
...............................................................................................................................GAAAGGTACAATCGGCCGAG................................................................................................................2040.5020200000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCCGAGG...............................................................................................................2840.5020200000000
..........................................................................................................................TCAAGGAAAGGTACAATCGGCCGAGGC..............................................................................................................2740.5020200000000
................................................TATCGATGAGGCTGCCAACTTGG............................................................................................................................................................................................2320.5010100000000
................................................TATCGATGAGGCTGCCAAA................................................................................................................................................................................................1920.5010100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCGC.................................................................................................................2140.5020200000000
................................................................................................................................AAAGGTACAATCGGCCGAGG...............................................................................................................2040.5020200000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCCGC.................................................................................................................2640.5020200000000
.............................................................................................................................AGGAAAGGTACAATCGGCC...................................................................................................................1940.5020200000000
......................................................TGAGGCTGCCAACTTGGTACGACAAA...................................................................................................................................................................................2620.5010100000000
........................................................................................................ACACTGCATGGGAACGTCTC.......................................................................................................................................2020.5010100000000
...............................................TTATCGATGAGGCTGCCAACTTGG............................................................................................................................................................................................2420.5010100000000
...............CACACAGAAGTTTCATCATTTGAA............................................................................................................................................................................................................................2430.3310100000000
.............AACACACAGAAGTTTCATCATTT...............................................................................................................................................................................................................................2330.3310100000000
...........................................................................................GACACTGCTTACAACACTGCATGG................................................................................................................................................2430.3310100000000
..............ACACACAGAAGTTTCATCATTTGAAAACA........................................................................................................................................................................................................................2930.3310100000000
...........................................................................................GACACTGCTTACAACACTGCATG.................................................................................................................................................2330.3310100000000
............................................................................................ACACTGCTTACAACACTGC....................................................................................................................................................1930.3310100000000
............................................................................................ACACTGCTTACAACACTGCATGA................................................................................................................................................2330.3310100000000
...............................................................................................CTGCTTACAACACTGCATGG................................................................................................................................................2030.3310100000000
.............................................................................................CACTGCTTACAACACTGCATG.................................................................................................................................................2130.3310100000000
.............AACACACAGAAGTTTCATCAT.................................................................................................................................................................................................................................2130.3310000000100
...........................................................................................GACACTGCTTACAACACTGCATGGG...............................................................................................................................................2530.3310100000000
.........GACGAACACACAGAAGTTTCATC...................................................................................................................................................................................................................................2330.3310100000000
..............ACACACAGAAGTTTCATCATTTGT.............................................................................................................................................................................................................................2430.3310100000000
.......TTGACGAACACACAGAAGTTTCA.....................................................................................................................................................................................................................................2330.3310100000000
...............CACACAGAAGTTTCATCATTTGAAA...........................................................................................................................................................................................................................2530.3310100000000
................................................................................................................................AAAGGTACAATCGGCCGAGGCAA............................................................................................................2340.2510100000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCAA..................................................................................................................2540.2510100000000
...........................................................................................................................CAAGGAAAGGTACAATCGG.....................................................................................................................1940.2510100000000
.......................................................................................................................GTCTCAAGGAAAGGTACAATCGGCC...................................................................................................................2540.2510100000000
..........................................................................................................................TCAAGGAAAGGTACAATCGGT....................................................................................................................2140.2510100000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGT....................................................................................................................2340.2510100000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCCGAA................................................................................................................2740.2510100000000
.....................................................................................................................................TACAATCGGCCGAGGC..............................................................................................................1640.2510000000100
..................................................................................................................................AGGTACAATCGGCCGAGGC..............................................................................................................1940.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGGC....................................................................................................................1840.2510100000000
..............................................................................................................................GGAAAGGTACAATCGGCCGAG................................................................................................................2140.2510100000000
................................................................................................................................AAAGGTACAATCGGCCGAGGCA.............................................................................................................2240.2510100000000
.......................................................................................................................GTCTCAAGGAAAGGTACAATCGG.....................................................................................................................2340.2510100000000
.......................................................................................................................GTCTCAAGGAAAGGTACAATCGGC....................................................................................................................2440.2510100000000
.................................................................................................................................AAGGTACAATCGGCCGAGGCATAT..........................................................................................................2440.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGG.....................................................................................................................1740.2510000000100
............................................................................................................................AAGGAAAGGTACAATCGG.....................................................................................................................1840.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCGAGGC..............................................................................................................2440.2510100000000
.......................................................................................................................GTCTCAAGGAAAGGTACAATCG......................................................................................................................2240.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCGAGGCATA...........................................................................................................2740.2510100000000
..................................................................................................................................AGGTACAATCGGCCGAGGCA.............................................................................................................2040.2510100000000
...........................................................................................................................CAAGGAAAGGTACAATCGGCC...................................................................................................................2140.2510100000000
...........................................................................................................................CAAGGAAAGGTACAATCGGC....................................................................................................................2040.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCGAGGT..............................................................................................................2440.2510010000000
........................................................................................................................TCTCAAGGAAAGGTACAATC.......................................................................................................................2040.2510100000000
...........................................................................................................................CAAGGAAAGGTACAATCGGCCGAGGC..............................................................................................................2640.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCG..................................................................................................................2040.2510100000000
..............................................................................................................................GGAAAGGTACAATCGGCCGAGGCA.............................................................................................................2440.2510100000000
.........................................................................................................................CTCAAGGAAAGGTACAATCGGCCG..................................................................................................................2440.2510100000000
.............................................................................................................................AGGAAAGGTACAATCGGCCGT.................................................................................................................2150.2010100000000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCCGGT................................................................................................................2750.2010100000000
.............................................................................................................................AGGAAAGGTACAATCGGAAA..................................................................................................................20140.0710100000000
droPer2
GCAGCATTTGACGAGCACACAGAAGTTTCATCATTTGAAAACACTACTTATCGATGAGGATGCCAACTTGGTACGACATTTGGCGATCCCGGACACTGCTTACAACACTGCATGGGAACGTCTCAAGGAAAGGTACAATCGGCCGAGGCATATCGTAAACTCGTTTTTGGAACAATTTATGAGGTTGCCCACAACTACTAAAATTGATGCGGCGATT-TTGCGTAAAGTGTCCGACAGTGCAAACGAAATTGTACGTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................TCTCAAGGAAAGGTACAATCGGC....................................................................................................................2370.715320000
......................................................................................TCCCGGACACTGCTTACAACACT......................................................................................................................................................2320.501010000
...................................................................TTGGTACGACATTTGGCGATCCC.........................................................................................................................................................................2320.501010000
............................................................................................ACACTGCTTACAACACTGCATGG................................................................................................................................................23110.455050000
..............................................................................................................................................................................................ACAACTACTAAAATTGATGCGGCGA............................................2590.333030000
...............................................................................................................................................................................................CAACTACTAAAATTGATGCGG...............................................21100.303030000
..............................................................................................................................................................................................ACAACTACTAAAATTGATGCGG...............................................22100.303030000
..................................................................................................................................AGGTACAATCGGCCGAGGCATATCGT.......................................................................................................2640.251010000
...........................................................................................................................................................................................................................TGCGTAAAGTGTCCGACAGTGCAAACG.............2740.251010000
..............................................................................................................................................................................................ACAACTACTAAAATTGATGCGGCGATT-.........................................2790.222020000
.................................TTTGAAAACACTACTTATCGATGAGG........................................................................................................................................................................................................2650.201010000
............................................................................................ACACTGCTTACAACACTGCATG.................................................................................................................................................22110.182020000
................................................................................................TGCTTACAACACTGCATGGGAACGTC.........................................................................................................................................2670.141010000
.........................................................................................................................CTCAAGGAAAGGTACAATCGGCCGA.................................................................................................................2570.141010000
................................................................................................TGCTTACAACACTGCATGGGAACG...........................................................................................................................................2470.141010000
........................................................................................................................TCTCAAGGAAAGGTACAATCGGCC...................................................................................................................2470.141010000
.....................................................................................................................................................................TTTGGAACAATTTATGAGGTTGCCC.....................................................................2570.141010000
..............................................................................................ACTGCTTACAACACTGCATGGGAAC............................................................................................................................................2570.141010000
..........................................................................................................................TCAAGGAAAGGTACAATCGGCC...................................................................................................................2270.141010000
.........................................................................................................................CTCAAGGAAAGGTACAATCGG.....................................................................................................................2170.141010000
...................................................................................................................................................................TTTTTGGAACAATTTATGAGG...........................................................................2170.141010000
..........................................................................................................................TCAAGGAAAGGTACAATCGGCCG..................................................................................................................2370.141010000
..............................................................................................................................................................................................ACAACTACTAAAATTGATGCGGCGATT-T........................................2890.111010000
...............................................................................................................................................................................................CAACTACTAAAATTGATGCGGC..............................................2290.111100000
...............................................................................................................................................................................................CAACTACTAAAATTGATGCGGCGA............................................2490.111010000
..............................................................................................................................................................................................ACAACTACTAAAATTGATGCGGCGAT...........................................2690.111000001
..............................................................................................ACTGCTTACAACACTGCATGGGA..............................................................................................................................................23110.091010000
................................................................................................TGCTTACAACACTGCATGG................................................................................................................................................19110.091010000
............................................................................................ACACTGCTTACAACACTGCATGGG...............................................................................................................................................24110.091010000
.............................................................................................CACTGCTTACAACACTGCATG.................................................................................................................................................21110.091010000
droWil2
AAGGGAGTTAACCAACACTCAAAAGTTTCATCATTTAAAAACACTGCTCGTCGATGATGCTGCCAACTTGGTGCGGCACCTGGCGATAACTGACACGGCTTACAACACTGCTTGGGAACG-CTTAAGGAAAGATACAATAGGCCACGCCATATTGTGAACTCATTTTTGGAGAAATTTATGGGTCTACCAACGACAAACAAAATTGATGTGTCCATC-TTACGCAAGGTATCAGATGGCACAAATGAGATTGTTCGCGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................ACGGCTTACAACACTGCTTGGGAACG-..........................................................................................................................................26200.25523000
.................................................................................................GCTTACAACACTGCTTGGGAACG-C.........................................................................................................................................24200.20404000
.................................................................................................GCTTACAACACTGCTTGGGAACG-CT........................................................................................................................................25200.10202000
..............................................................................................ACGGCTTACAACACTGCTTGGGAACG-CT........................................................................................................................................28200.10202000
...............................................TCGTCGATGATGCTGCCAACTTGG............................................................................................................................................................................................24200.10201010
..............................................................................................ACGGCTTACAACACTGCTTGGGAACG-C.........................................................................................................................................27200.10202000
.........................................................................................................................................................................GAGAAATTTATGGGTCTACCAACGA.................................................................25110.09101000
.................................TTTAAAAACACTGCTCGTCGATGATGC.......................................................................................................................................................................................................27130.08101000
.................................TTTAAAAACACTGCTCGTCGATGA..........................................................................................................................................................................................................24130.08101000
.................................TTTAAAAACACTGCTCGTCGATGATGA.......................................................................................................................................................................................................27130.08100010
...........................................................................................................................................................................................................TTGATGTGTCCATC-TTACGCAAGGTA.............................26140.07101000
.....................................................................................................................................................................TTTGGAGAAATTTATGGGTCTACC......................................................................24140.07101000
.......................................................................................................................................................................................................................TC-TTACGCAAGGTATCAGATGG.....................22160.06101000
......................................................................................................................................................................................................................ATC-TTACGCAAGGTATCAGATGGC....................24160.06101000
....................................AAAAACACTGCTCGTCGATGATGCTGC....................................................................................................................................................................................................27160.06101000
..........................................................................................................................................TAGGCCACGCCATATTGTGAACTCATT..............................................................................................27170.06101000
...................................TAAAAACACTGCTCGTCGATGATGC.......................................................................................................................................................................................................25170.06100010
......................................................TGATGCTGCCAACTTGGTGCGGCAC....................................................................................................................................................................................25190.05101000
................................................................................................................................AAAGATACAATAGGCCACGCCA.............................................................................................................22190.05101000
.......................................................................................................................................................................................................................................CAGATGGCACAAATGAGATTGTTCGCGG28200.05101000
.......................................................................TGCGGCACCTGGCGATAACTGACACGG.................................................................................................................................................................27200.05101000
............................................................................................ACACGGCTTACAACACTGCTTGGG...............................................................................................................................................24200.05101000
..............................................................................................ACGGCTTACAACACTGCTTGGGA..............................................................................................................................................23200.05100010
............................................TGCTCGTCGATGATGCTGCCAACT...............................................................................................................................................................................................24200.05101000
...............................................TCGTCGATGATGCTGCCAACTTG.............................................................................................................................................................................................23200.05101000
.....................................................................................ATAACTGACACGGCTTACAACACTGCT...................................................................................................................................................27200.05101000
...............................................TCGTCGATGATGCTGCCAACTTGGTC..........................................................................................................................................................................................26200.05101000
..........................................................................................TGACACGGCTTACAACACTGCTTGGGA..............................................................................................................................................27200.05101000
droVir3
AAAACATTTGAAAACAGCTCAAAAATTGCATTTCTTAAAGACTTTTTCGTCTAATGAAGAAGCTTGCGCAATATGACATTTGCCAAATACAGACTCGG--TATTATACTGGATGGGAAGGCCTAATTGAACGATACAACCGACCACCTCCTGTCGATAAATCAATTATGAAGGCCTTAATGGAGTTGCCAACAACGA--------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GACAACGTTGTCGAATATTCAGAAGTATCATCATTTAAAATCTTGTTTAAAAGGAGAAGCTGCGAAACTTATTCAGCATCTGCCCTTAGCCGATGCCAACAATGTGATAGCTTTGAATTCATTAGTTGATCGGTACGAGAAGCCTCGCTATTTGGTAAACGTGTTGTTGGATACATTTACTGGACTGTGGATCAAAACC----------CAGCATCG-CTTCGATCGCTAACAAACGAAGCTGGTACCGTAATTCGGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................GAATTCATTAGTTGATCGGTACGA.........................................................................................................................2472.29161100023
..................................................................................................................GAATTCATTAGTTGATCGGTACGAGA.......................................................................................................................2672.29161000015
..................................................................................................................GAATTCATTAGTTGATCGGTACG..........................................................................................................................2371.43101000000
..................................................................................................................GAATTCATTAGTTGATCGGTACGAG........................................................................................................................2570.866600000
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACCGTA........2370.574300010
..................................................................................................................GAATTCATTAGTTGATCGGTAC...........................................................................................................................2270.574110002
...................................................................................................................AATTCATTAGTTGATCGGTACGA.........................................................................................................................2370.433300000
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACCGTAATTCG...2870.292200000
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACCGTAATTC....2770.292200000
....................................................................TTATTCAGCATCTGCCCTTAGCC........................................................................................................................................................................23100.202100100
....................................................................TTATTCAGCATCTGCCCTTAGC.........................................................................................................................................................................22100.202100010
...............................................................................................................................................................................................................................ATCGCTAACAAACGAAGCTGGTACCGTA........2850.201000001
..........................................................................................................................TAGTTGATCGGTACGAGAAGCCTCGC...............................................................................................................2660.171100000
...............................................................................................................................GATCGGTACGAGAAGCCTCGC...............................................................................................................2160.171000010
.............................................................................................................................TTGATCGGTACGAGAAGCCTCGCTATT...........................................................................................................2760.171100000
................................................................................................................................ATCGGTACGAGAAGCCTCGC...............................................................................................................2060.171100000
...................................................................................................................AATTCATTAGTTGATCGGTACGAGA.......................................................................................................................2570.141100000
.....................................................................................................................................................................................................................................AACAAACGAAGCTGGTACCGT.........2170.141100000
..................................................................................................................GAATTCATTAGTTGATCGGTACGC.........................................................................................................................2470.141010000
......................................................................................................................TCATTAGTTGATCGGTACGA.........................................................................................................................2070.141100000
............................................................TGCGAAACTTATTCAGCATCTGCCCTT............................................................................................................................................................................2770.141100000
............................................................TGCGAAACTTATTCAGCATCTGCCCT.............................................................................................................................................................................2670.141100000
...................................................................................................................AATTCATTAGTTGATCGGTACG..........................................................................................................................2270.141100000
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACCGTAA.......2470.141100000
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACC...........2070.141000010
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACCGT.........2270.141100000
....................................................................................................................................................................................................................................TAACAAACGAAGCTGGTACCGTAATT.....2670.141100000
............................................................................................................................................................................................................................TCGATCGCTAACAAACGAAGCTGG...............2480.131100000
...................................................AGGAGAAGCTGCGAAACTTATTCAGCATC...................................................................................................................................................................................2980.131100000
.............................................TTTAAAAGGAGAAGCTGCGAAACTTATT..........................................................................................................................................................................................2880.131100000
.....................................................GAGAAGCTGCGAAACTTAT...........................................................................................................................................................................................1980.131100000
.................................................................AACTTATTCAGCATCTGCCCTTAGCCGA......................................................................................................................................................................2890.111100000
..........................................................................................................................................GAAGCCTCGCTATTTGGTAAACGT.................................................................................................2490.111000001
......................................................................ATTCAGCATCTGCCCTTAGCC........................................................................................................................................................................21100.101100000
....................................................................................................................................GTACGAGAAGCCTCGCTAT............................................................................................................19110.091001000

Generated: 05/17/2015 at 10:08 PM