ID:

dan_337

 Coordinate:

scaffold_10513:147022-147172 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.0 -6.9 -6.9

Flybase annnotation

exon [dana_GLEANR_21015:2]; CDS [Dana\GF19257-cds]; intron [Dana\GF19257-in]

Repeatable elements

NameClassFamilyStrand
Hoana1DNAhAT-hobo+
Helitron-2_DVirRCHelitron-
mature
star
  1. dan_337  scaffold_10513:147032-147052 -
  2. scaffold_12911:1198997-1199017 +
  3. scaffold_12911:3916976-3916996 +
  4. scaffold_13077:162882-162902 -
  5. scaffold_13099:1377543-1377563 +
  6. scaffold_13099:2359362-2359382 +
  7. scaffold_13137:1040875-1040895 -
  8. scaffold_13137:1075269-1075289 +
  9. scaffold_13250:577705-577725 +
  10. scaffold_13250:3289128-3289148 +
  11. scaffold_13333:128902-128922 +
  12. scaffold_13335:3220012-3220032 +
  13. scaffold_13337:20400478-20400498 -
  14. scaffold_13499:397090-397110 +
  15. scaffold_13499:1626443-1626463 +
  16. scaffold_13767:876941-876961 -
  17. scaffold_13767:1341062-1341082 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAAAATATATCTGCATTATCTACCGGGCACTCAACTGGTTCCTCATCAGGTAATTTGTCGAATATATCCTTCATAATTTGAATATACCCTTGCAGAGTGTATTACAATTTTTGTCAAAAGAGTGAAACGCAGTGAAGAAGACATCTCCGAACCCAATAAGCTATATATATTATTGATCAGGATCACCTCCTGAGTGTCTATTTCTACGAAAACTCGTCTCTCAGTTTCAAAGCTATCAAGTTGATACTTT
***********************************************************************************************************************.............((((..........(((((...((((((..........)))))).)).)))))))....************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V106
head
...............ATTATCTACCGGGCACTCAACTGGTTCCC............................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0
.....ATATATCTGCATTATCTACCGGGCACTC.......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
.......................................................................................................................AGAGTGAAACGCAGTGAAGAA............................................................................................................... 21 0 1 1.00 1 0 1 0 0
...................TCTACCGGGCACTCAACTG..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0
...........CTGCATTATCTACCGGGCACTC.......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.....ATATATCTGCATTATCTACCGGGC.............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
................TTATCTACCGGGCACTCAACTG..................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
.......ATATCTGCATTATCTACCGG................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0
.CAAAATATATCTGCATTAT....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...........................GCACTCAACTGGTTCCTCATC........................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
..........................................................................................................................................................................TTATTGATCAGGATCACCTCC............................................................ 21 0 17 0.65 11 11 0 0 0
..................................................................................................................................................................................................................................TTCAAAGCTATCAAGTTGA...... 19 0 3 0.33 1 1 0 0 0
.....ATATTTCTGCATTCTTTACCG................................................................................................................................................................................................................................. 21 3 4 0.25 1 0 0 1 0
.............................................................................................................................AAACGCAGTGAAGAAGACATCTCC...................................................................................................... 24 0 6 0.17 1 0 1 0 0
..................................................................................................................................................................TATATATATTATTGATCAGGATCACCTCC............................................................ 29 0 8 0.13 1 1 0 0 0
..............................................................................................................................AACGCAGTGAAGAAGACCTCTCCGAAA.................................................................................................. 27 2 9 0.11 1 1 0 0 0
..........................................................................................................................................................................TTATTGATCAGGATCACCTCCTGAG........................................................ 25 0 13 0.08 1 1 0 0 0
........................................................................................................................................................................TATTATTGATCAGGATCACC............................................................... 20 0 20 0.05 1 0 0 0 1
....................................................................................................................................................................TATTTATTATTGATCAGGATCACC............................................................... 24 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

TGTTTTATATAGACGTAATAGATGGCCCGTGAGTTGACCAAGGAGTAGTCCATTAAACAGCTTATATAGGAAGTATTAAACTTATATGGGAACGTCTCACATAATGTTAAAAACAGTTTTCTCACTTTGCGTCACTTCTTCTGTAGAGGCTTGGGTTATTCGATATATATAATAACTAGTCCTAGTGGAGGACTCACAGATAAAGATGCTTTTGAGCAGAGAGTCAAAGTTTCGATAGTTCAACTATGAAA
************************************************************.............((((..........(((((...((((((..........)))))).)).)))))))....*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
....................................ACCAAGGAGTAGTCATTTAA................................................................................................................................................................................................... 20 2 2 1.00 2 0 2 0 0
...................................GACCAAGGAGTAGTATATT..................................................................................................................................................................................................... 19 2 3 0.67 2 2 0 0 0
....................................ACCAAGGAGTAGTATATTA.................................................................................................................................................................................................... 19 2 4 0.50 2 2 0 0 0
TATATTATATAGACGTTATAGATG................................................................................................................................................................................................................................... 24 3 4 0.25 1 0 0 0 1
.................................TAGACCAAGGAGTAGTATAT...................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 1 0
.....................................CCAAGGAGTAGTCATTTAA................................................................................................................................................................................................... 19 2 5 0.20 1 0 1 0 0
......................................................................................................................................................................................................................AGCAGAGGGTCAGAGTTTCGTT............... 22 3 6 0.17 1 0 0 1 0
...................................GACCAAGGAGTAGTATAT...................................................................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0
..................................AGACCAAGGAGTAGTATATT..................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 1 0
...........................................................................................................................................................................................................................TGAGTCAAAGATTCCATAGT............ 20 3 11 0.09 1 0 1 0 0
....................................ACCCAGGAGTAGTCATTTAA................................................................................................................................................................................................... 20 3 13 0.08 1 0 1 0 0
...............................................................................................................................TGCGTCACTTCTTCTGTAGAG....................................................................................................... 21 0 20 0.05 1 1 0 0 0
..................................................................................................................................GTCACTTCTTCTGTAGAGGCT.................................................................................................... 21 0 20 0.05 1 1 0 0 0
..............................................................................................................................TTGCGTCACTTCTTCTGTAGAGGCT.................................................................................................... 25 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_10513:146972-147222 - dan_337 ACAAA-----ATA--TATCTGCA------T--TAT-----------C-TACCGGGCA--------------------CTCAACTGGTTCCTCATCAGGTAATT---------------------------------------------------------------------------------------------------TG--------------------------TCGAATATATCCTTCAT-A---------------------ATTTGA---ATATACCCTTGCA--G-------AGTGTA-TTACAATTTTTG--TC-----AAAAGAGTGAAACGCAGTGAAGAAGACATCTCCGAACCCAAT-----------------------AAG------------CTATATATATTATTGATCAGGATCACCTCCTGAGT---------------------------------GTCT----ATTTCT----------------ACGAAAACTCGTCTCTCA----GTTTCAAAGCTATCAAGTTGATACTTT
droBip1 scf7180000391660:506-758 + ACGAA-----ATC--CGTGA------------TTA-----------C-TACCGG-----------------------TTTA----------------AT----------TG--A---------CTTTAGTTT-AGA--------------------------------------------------------------TATTTC--------------------------TTGAATA---------T-CA-------------TC-----------TTTTTATACCCTTGCA--G-------AGGGTA-TTATAATTTTGT--CC-----AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCAT-GTCCGTCT----------------GTCTGTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGCTATCGTCTTGAAACTTT
droKik1 scf7180000302684:935951-936213 - AGAAT-----ATA--TA--TGGT------T--TAT-----------------GGGGT--------------------CGGAAATGATTCCT------------------TG--ACTA---------G-----------AAAAT--T---------------------A--------------TTATT---------------T--------------------------TGTA-------------------TTATAAAATCTGA-----------TTTTTATACCCTTGCA-----------GGGTA-TTATAATTTCAG--TC-----AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTA-T-----------------------AAG------------GTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCAT-GTCCGTCT----------------GTCTGTTTCT----------------ACTCAAACTAGTCCCTCA----GTTTTAAAGCTATCTGAATGAAACTTT
droFic1 scf7180000448939:17618-17885 - CAGAA------TTTAT--CTGATA---------AA-----------C-T----------------------------ATTAA---------------AGACTC---------------------------------------------------------------------------------------------------CACAGCTTCACCTGCGAAGAATAAGTTTGCGAAGATTAAGTTTA--A---------------------GTTTAA---TTATACCCTTGCA--GAG-CAAAAGTGTA-TTATAATTTCAG--TC-----AGAAGTTTGCAACACAGTGAAGGAGACACCTCAGACCCAA-T-----------------------AAA------------GTATTTATATTCTTGACCAGCATTACAATCAGAATCGAAATACCTAT-GTAT------------------------GTTTCT----------------CTTCAAACTAGTCTCTCA----GTTTTAAAGCTATCTTACTTAAACATA
droEle1 scf7180000491107:87254-87512 - AGAGG-ATATA----T--TTAT---------------------------------------------------------------------------------C----------------------------------AAAATACTA-------------GCC--CCTCGGCGTACTTCTTATCACCCCGAATTAAA-------------------------------------ATATACGGTACAC----------------GG-----------TTTTTATACCCTTGCA--G-------AGGGTA-TTATAATTTCAG--TC-----AGAAGTTTGCAATGCAGTGAAGGAGAATTCACCGTCCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAG-------------------ACAGTCAT-GTCCGTCTGTCAGTCTGTCTGTCC----GTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGCTATCTGCATGAAACTTT
droRho1 scf7180000774843:6156-6417 + AAGAT-----ATA--TCTATGTA------A--TAT-----------CT-GGAGTGC---------------------CTCAA---------------GT------------TAGTCCTTTGGGCCTTTGCTAG-----TAAA-----TACT-----------------------------------------------------------------------------------------------------------------------------TTATTATACCCTTGCA--G-------AGGGTA-TTATAATTTTGG--TC-----AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAAGCAT-GTCCGTCTG-------GTCTGTCT----GTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGATATCGAACTGAAACTTT
droBia1 scf7180000302292:2217701-2217950 + GCACT-----ATTTAC--TTGA---------------------------------AA--------------------TTCGAATTCATTCTAATTACGT-------------------------------------------------------------------------------------------------------GA---------------------------CA-------------TGGTA------TA-AGCTA-----------TTTTTATACCCTTGCA--G-------AGGGTA-TAATAATTTCAG--TC-----AGAAGTTTGCAACGCAATGAAGGAGACGTTTCCGACCCCA-T-----------------------AAA------------GTATATATATTCTTGATCACCGTCCCAAGACGAGTCGATCTAGCCAT-GTCCGTCT--------GTCCGTCC----GTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGCTATCAGGCTGAAACTTT
droTak1 scf7180000415456:15628-15865 - CAAATAATATATA--CATATGTA------C--TAT-----------GC-ACAC------------------------------TGGTCCA-------GC-----CA-------A---------------------------------------------------------------------------------TCCGATT---------------------------TTTGACCA---------A-AAA---------CACTA-----------CTTTTATACCCTTGTA--G-------AGGGTA-TTATAATTTCAG--TC-----AGATGTTTGCAACGCAGTGAAGGAGACGTCTCCGACCACA-T-----------------------AAA------------GTATATATATTCTTGATCAGCATCAATAGCCGAGTCTATCTAGCCAT-G----------------------------------------------------CGAACTAGTCTCTCA----GTTTTAAAGATTTCGCGATGAAACTTT
droEug1 scf7180000408885:58660-58872 - GGCAC-----T--------------------------------------------------------------------------------------------------CG--ACTA---------T-----------AGCGT--T---------------------TCCTCCTGTTT------ATT---------------T--------------------------TTCG-------------------CTTTTATACCCG-TTAC------------------TCGTA--GAG-TAAAAGGGTA-TATTCGATTCAT--TG-----AAAAGTATGTAACAAGTAGAAGGAAGCGCTTCCGACCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCACTAGCGATGTCGATGGAGCCAT-GTCCGTCA----------------GTCCGTCCAT----------------CC-------------------------------GTCTGTCTGTTCGTCT
dm3 chr3LHet:601611-601801 + GTTGG-----TC-----------------------------------------------------------------TCCAA---------------GTAGTC---------------------------------------------------------------------------------------------------TGCAACCTCTCTCACA----------------------------C-A---------------------ATCTTG---GTATATCCTTGAG--G-------AGGGTA-TATCGATTTCAG--TT-----ATAAGCTTGCAACGAAGTGAAAAAAGCATTTCAGTCCA-A-T-----------------------TAAGTGG--------GTATAAAT-------ATCAGTAAGAACAGCCGTACC-----------------------------------C----TTTTTC----------------ACGATAATTATTCTTTTA----ATTTTTAACATATC-------------
droSim2 3r:692371-692632 + CTAAC-----ATG--CA------------------------------------------------------------ATCAA---------------GTAAT---------------------CTTTAGTTA-GGAAA---------AAATTTAATTTTATCCAACTTCCTATTATTT------ATT--------------------------------------------------------------------------ATTA-----------TCTGTATGCCTTTGCA--G-------AGGGTA-TGTTAATTTCAT--CC-----AGGGGCTTGCAACGCAGTAAACTAAACAT----------A-TATAGTATGTATAAGTATATAAGTCAA------------G--TATATATACTTGATCAATACCAAATGCCGAGTAGATATAGCCAT-GTCCGTCC----------------GTCCCTTTCT----------------ACGAAAACTAAACCTCCC----AGTTTAAACCTATCT------------
droSec2 scaffold_6:864773-865051 + AATTA-----TTC------TTATA-----T--CCA-----------C-TAACATGCA--------------------ATCAA---------------GTAAT---------------------CTTTAGTTA-GGAAA---------AAATTTAATTTTATCCAACTTCCTATTATTT------ATT--------------------------------------------------------------------------ATTA-----------TCTGTATGCCTTTGCA--G-------AGGGTA-TGTTAATTTCAT--CC-----AGGGGCTTGCAACGCAGTAAACTAAACAT----------A-TATAGTATGTATAAGTATATAAGTCAA------------G--TATATATACTTGATCAATACCAAATGCCGAGTAGATATAGCCAT-GTCCGTCC----------------GTCCCTTTCT----------------ACGAAAACTAAACCTCCC----AGTTTAAACCTATCT------------
droYak3 v2_chrUn_1013:17209-17495 - TTTGC-----ACT--TCCACCAG-CTGAGTAACGGGTATCAGATAGTC-GG----------------------------------------------------GGAACTCG--ACTA---------T-----------AGAGT--T---------------------CTA----------------------------------------------------------------------------T-CGTGTTTTTATACCCG-TTGT------------------TCGTA--GAG-TAAAAGGGTA-TACTAGATTCGT--TA-----AATAGTATGTAACAGGCAGAAAGAAGCGTTTCCGACCATA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCAT-GTCTGTCTGTCCGTCTGTCTGTCC----GTCCGT----------------ATGAACGCTGAGATCTCAGGAACTACAAAAGCTACAAAGTTGAGATTAA
droEre2 scaffold_4690:11215529-11215717 + TAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATATACCCTAGCA--G-------CGGGTCCTTATCAATTTGG--TC-----AGACGCTTGCAACGCCGCGAAGAGTA---TTCCAATCTTG-T-----------------------AACGTAGATGATATAGTATATATA----------------------------ATATAAGCAT-GTCCGTATGTTTGTCTGTCTGTCT----GTCGTT----------------GAGCAAACCAGTAACTCA----ATTTTGAAGCCATCTGGTTGAAACTTT
dp5 Unknown_group_51:32575-32731 - ATTTG-----CTG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------CA-------A-----------AATGAG-TATTGGGGTA-TATTAGATTTGTAGTGAAAATGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCA-T-----------------------AAA------------GTATATATATTCTTGATCAGCATCAATAGCCGAGT----------------------------------------------------------------------------------------------------------------
droPer2 scaffold_5688:1256-1463 - ATTGC-----TTC----------------------------------------------------------------------------C----------------------------------TCTTTTTG-GGGAA---------TTCTATAATT----------------------------------------------------------------------------------------------------ATACCCG-ATACTCA-------A-----------AATGAG-TATTGGGGTA-TATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCA-T-----------------------AAA------------GCATATATATTCCTGATCAGCATCAATAGCCGAGCCGATTGAGCCAT-GTCTGTCT----------------GTCCGTCCGT----------------CCGTCTGTCCGTCCC----------------------------------
droWil2 scf2_1100000004590:3619020-3619264 - ACAAT-----ATA--TATCAAAA------T--AAT-----------T-GAAAGAACAATCGTATTGTTCTATATATACCTAA---------------GTAGTT---------------------------------------------------------------------------------------------------GG---------------------------CC-------------AGGAA------TG-CATCA-----------TTGTTATACCCTTGCA--A-----AAAGGGTA-TATTAATTTTGG--TC-----AGAAGTGTGCAACGCATAGAAGGAAACATCTCCGACCAAA-G--------TA-------------AAA------------GTATATATATTCTTGATCAGCACGACGAGACGAGTT-----------------------------------C----GAATTA----------------ACGCAAACTCCTCCTAGA----CCGTAAGAGCTACA-----GAGCTTTT
droVir3 scaffold_13045:1624766-1625027 + ACATT-----ATG--GATGTGTA------T--TAT-----------TT-AA----------------------------------------------------TGAAAT--TAATTAT--------------------------------------------------------------------TTCGAACAAAAATATT---------------------------TTTGAATA---------T-AAT---------TTTTT-----------TTTTTATACCCTTGCA--G-------AGGGTA-TTATAATTTTGT--CG-----TGAAATGTGTAACCCATAGAAGGAGACATCTCCGACACCA-T-----------------------AAA------------GTATATATATTCTTAATCAGCATCAGCAGCCGAGTCGATATAGCAATAGTCCGTCT----------------GTCTGTTTCT----------------ATGCGAACTAGTCCCTCA----GTTTTATAGCTATCTTAATGAAACTTT
droMoj3 scaffold_6680:24196198-24196463 - CAATC-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCGTTTCATTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACCCATTGA---A-----------AATGGGAAATCAGGGTA-TAATGGTTTTG---TT-----AAAAGTATGTAACAGGCAGAAGAAGGCATGGCAGACCCCA-C-----------------------AAA------------GTATATATATTCTCTATCAGGGCGACGAGCTGAGTCGATTTGGCTCT-GTCCGTCT----------------GTCTGTCCGTCCGTCCGTCCGTATGTATGAACGCGTCGATCTCAGAAGATATAAGAGCTAGAGACTTGAAATTTG
droGri2 scaffold_15126:4776520-4776713 - AATTT-----ATA------GTGTA-----T--TCT-----------T-------------------------------TT-----------------------C----------------------------------AAAATATTA------------------------------------------------------------------------------------------------------------------C--------------TCATTTTCTCCTTGTG--G-------AGCGTA-TTATAATTA------A-----TGAACTTTGTTACGCCTTGAAGAAGACGTCTTTGACCCCATT-----------------------AAG------------TTACATATATTCTTGATATGCAACACTATCTGAGTCGACATAA----------------------------------------------------------CAAACTTGTCACTTA----GTCTTGAAGTTATCTGAATGAAACTTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ACAAA-----ATA--TATCTGCA------T--TAT-----------C-TACCGGGCA--------------------CTCAACTGGTTCCTCATCAGGTAATT---------------------------------------------------------------------------------------------------TG--------------------------TCGAATATATCCTTCAT-A---------------------ATTTGA---ATATACCCTTGCA--G-------AGTGTA-TTACAATTTTTG--TC-----AAAAGAGTGAAACGCAGTGAAGAAGACATCTCCGAACCCAAT-----------------------AAG------------CTATATATATTATTGATCAGGATCACCTCCTGAGT---------------------------------GTCT----ATTTCT----------------ACGAAAACTCGTCTCTCA----GTTTCAAAGCTATCAAGTTGATACTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................A------T--TAT-----------C-TACCGGGCA--------------------CTCAACTGGTTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
..........ATA--TATCTGCA------T--TAT-----------C-TACCGGGCA--------------------CTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.............................................................................................................................................................................................................................................................................................................................................AGAGTGAAACGCAGTGAAGAA...........................................................................................................................................................................................................2111.001100000
..................................T-----------C-TACCGGGCA--------------------CTCAACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
..................CTGCA------T--TAT-----------C-TACCGGGCA--------------------CTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..........ATA--TATCTGCA------T--TAT-----------C-TACCGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................T--TAT-----------C-TACCGGGCA--------------------CTCAACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............A--TATCTGCA------T--TAT-----------C-TACCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.CAAA-----ATA--TATCTGCA------T--TAT-----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................................GCA--------------------CTCAACTGGTTCCTCATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGATCAGGATCACCTCC.....................................................................................................................21170.65110110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGCTATCAAGTTGA......1930.331010000
...................................................................................................................................................................................................................................................................................................................................................AAACGCAGTGAAGAAGACATCTCC..................................................................................................................................................................................................2460.171100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATTATTGATCAGGATCACCTCC.....................................................................................................................2980.131010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGATCAGGATCACCTCCTGAG.................................................................................................................25130.081010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATTGATCAGGATCACC........................................................................................................................20200.051000001
droBip1
ACGAA-----ATC--CGTGA------------TTA-----------C-TACCGG-----------------------TTTA----------------AT----------TG--A---------CTTTAGTTT-AGA--------------------------------------------------------------TATTTC--------------------------TTGAATA---------T-CA-------------TC-----------TTTTTATACCCTTGCA--G-------AGGGTA-TTATAATTTTGT--CC-----AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCAT-GTCCGTCT----------------GTCTGTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGCTATCGTCTTGAAACTTTSizeHit CountTotal NormTotal
No Reads
droKik1
AGAAT-----ATA--TA--TGGT------T--TAT-----------------GGGGT--------------------CGGAAATGATTCCT------------------TG--ACTA---------G-----------AAAAT--T---------------------A--------------TTATT---------------T--------------------------TGTA-------------------TTATAAAATCTGA-----------TTTTTATACCCTTGCA-----------GGGTA-TTATAATTTCAG--TC-----AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTA-T-----------------------AAG------------GTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCAT-GTCCGTCT----------------GTCTGTTTCT----------------ACTCAAACTAGTCCCTCA----GTTTTAAAGCTATCTGAATGAAACTTTSizeHit CountTotal NormTotal
No Reads
droFic1
CAGAA------TTTAT--CTGATA---------AA-----------C-T----------------------------ATTAA---------------AGACTC---------------------------------------------------------------------------------------------------CACAGCTTCACCTGCGAAGAATAAGTTTGCGAAGATTAAGTTTA--A---------------------GTTTAA---TTATACCCTTGCA--GAG-CAAAAGTGTA-TTATAATTTCAG--TC-----AGAAGTTTGCAACACAGTGAAGGAGACACCTCAGACCCAA-T-----------------------AAA------------GTATTTATATTCTTGACCAGCATTACAATCAGAATCGAAATACCTAT-GTAT------------------------GTTTCT----------------CTTCAAACTAGTCTCTCA----GTTTTAAAGCTATCTTACTTAAACATASizeHit CountTotal NormTotal
No Reads
droEle1
AGAGG-ATATA----T--TTAT---------------------------------------------------------------------------------C----------------------------------AAAATACTA-------------GCC--CCTCGGCGTACTTCTTATCACCCCGAATTAAA-------------------------------------ATATACGGTACAC----------------GG-----------TTTTTATACCCTTGCA--G-------AGGGTA-TTATAATTTCAG--TC-----AGAAGTTTGCAATGCAGTGAAGGAGAATTCACCGTCCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAG-------------------ACAGTCAT-GTCCGTCTGTCAGTCTGTCTGTCC----GTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGCTATCTGCATGAAACTTTSizeHit CountTotal NormTotal
No Reads
droRho1
AAGAT-----ATA--TCTATGTA------A--TAT-----------CT-GGAGTGC---------------------CTCAA---------------GT------------TAGTCCTTTGGGCCTTTGCTAG-----TAAA-----TACT-----------------------------------------------------------------------------------------------------------------------------TTATTATACCCTTGCA--G-------AGGGTA-TTATAATTTTGG--TC-----AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAAGCAT-GTCCGTCTG-------GTCTGTCT----GTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGATATCGAACTGAAACTTTSizeHit CountTotal NormTotal
No Reads
droBia1
GCACT-----ATTTAC--TTGA---------------------------------AA--------------------TTCGAATTCATTCTAATTACGT-------------------------------------------------------------------------------------------------------GA---------------------------CA-------------TGGTA------TA-AGCTA-----------TTTTTATACCCTTGCA--G-------AGGGTA-TAATAATTTCAG--TC-----AGAAGTTTGCAACGCAATGAAGGAGACGTTTCCGACCCCA-T-----------------------AAA------------GTATATATATTCTTGATCACCGTCCCAAGACGAGTCGATCTAGCCAT-GTCCGTCT--------GTCCGTCC----GTTTCT----------------ACGCAAACTAGTCTCTCA----GTTTTAAAGCTATCAGGCTGAAACTTTSizeHit CountTotal NormTotal
No Reads
droTak1
CAAATAATATATA--CATATGTA------C--TAT-----------GC-ACAC------------------------------TGGTCCA-------GC-----CA-------A---------------------------------------------------------------------------------TCCGATT---------------------------TTTGACCA---------A-AAA---------CACTA-----------CTTTTATACCCTTGTA--G-------AGGGTA-TTATAATTTCAG--TC-----AGATGTTTGCAACGCAGTGAAGGAGACGTCTCCGACCACA-T-----------------------AAA------------GTATATATATTCTTGATCAGCATCAATAGCCGAGTCTATCTAGCCAT-G----------------------------------------------------CGAACTAGTCTCTCA----GTTTTAAAGATTTCGCGATGAAACTTTSizeHit CountTotal NormTotal
No Reads
droEug1
GGCAC-----T--------------------------------------------------------------------------------------------------CG--ACTA---------T-----------AGCGT--T---------------------TCCTCCTGTTT------ATT---------------T--------------------------TTCG-------------------CTTTTATACCCG-TTAC------------------TCGTA--GAG-TAAAAGGGTA-TATTCGATTCAT--TG-----AAAAGTATGTAACAAGTAGAAGGAAGCGCTTCCGACCCTA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCACTAGCGATGTCGATGGAGCCAT-GTCCGTCA----------------GTCCGTCCAT----------------CC-------------------------------GTCTGTCTGTTCGTCTSizeHit CountTotal NormTotal
No Reads
dm3
GTTGG-----TC-----------------------------------------------------------------TCCAA---------------GTAGTC---------------------------------------------------------------------------------------------------TGCAACCTCTCTCACA----------------------------C-A---------------------ATCTTG---GTATATCCTTGAG--G-------AGGGTA-TATCGATTTCAG--TT-----ATAAGCTTGCAACGAAGTGAAAAAAGCATTTCAGTCCA-A-T-----------------------TAAGTGG--------GTATAAAT-------ATCAGTAAGAACAGCCGTACC-----------------------------------C----TTTTTC----------------ACGATAATTATTCTTTTA----ATTTTTAACATATC-------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..TGG-----TC-----------------------------------------------------------------TCCAA---------------GTAGTC---------------------------------------------------------------------------------------------------TGCAACCTC..........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................TTG---GTATATCCTTGAG--G-------AGGG...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TG---GTATATCCTTGAG--G-------AGGGTA-........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTAAGAACAGCCGT..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAT-------ATCAGTAAGAACAGCCG...................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................TCCAA---------------GTAGTC---------------------------------------------------------------------------------------------------TGCAACCTCTCT.......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................C-A---------------------ATCTTG---GTATATCCTTGAG--G-------A..............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................A-T-----------------------TAAGTGG--------GTATAAAT-------AGG.................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
CTAAC-----ATG--CA------------------------------------------------------------ATCAA---------------GTAAT---------------------CTTTAGTTA-GGAAA---------AAATTTAATTTTATCCAACTTCCTATTATTT------ATT--------------------------------------------------------------------------ATTA-----------TCTGTATGCCTTTGCA--G-------AGGGTA-TGTTAATTTCAT--CC-----AGGGGCTTGCAACGCAGTAAACTAAACAT----------A-TATAGTATGTATAAGTATATAAGTCAA------------G--TATATATACTTGATCAATACCAAATGCCGAGTAGATATAGCCAT-GTCCGTCC----------------GTCCCTTTCT----------------ACGAAAACTAAACCTCCC----AGTTTAAACCTATCT------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................TAGTATGTATAAGTATATAAGTCAA------------G--TA..............................................................................................................................................2812.00200000000200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGCCGAGTAGATATAGCCAT-GTC................................................................................................2712.00200000000001100000
.........................................................................................................................................................................................TT--------------------------------------------------------------------------ATTA-----------TCTGTATGCCTTTGCA--G-------A..............................................................................................................................................................................................................................................................2411.00100000010000000000
.TAAC-----ATG--CA------------------------------------------------------------ATCAA---------------GTAAT---------------------CTTTAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................TATAGTATGTATAAGTATATAAGTCAA------------G--TA..............................................................................................................................................3011.00100000000100000000
.........................................................................................................................................................................................TT--------------------------------------------------------------------------ATTA-----------TCTGTATGCCTTTGC..........................................................................................................................................................................................................................................................................2111.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGCCGAGTAGA.............................................................................................................1511.00100000000001000000
................................................................................................................................GTTA-GGAAA---------AAATTTAATTTT..............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
droSec2
AATTA-----TTC------TTATA-----T--CCA-----------C-TAACATGCA--------------------ATCAA---------------GTAAT---------------------CTTTAGTTA-GGAAA---------AAATTTAATTTTATCCAACTTCCTATTATTT------ATT--------------------------------------------------------------------------ATTA-----------TCTGTATGCCTTTGCA--G-------AGGGTA-TGTTAATTTCAT--CC-----AGGGGCTTGCAACGCAGTAAACTAAACAT----------A-TATAGTATGTATAAGTATATAAGTCAA------------G--TATATATACTTGATCAATACCAAATGCCGAGTAGATATAGCCAT-GTCCGTCC----------------GTCCCTTTCT----------------ACGAAAACTAAACCTCCC----AGTTTAAACCTATCT------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................TAATTTCAT--CC-----AGGGGCTTGC.........................................................................................................................................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................ATTA-----------TCTGTATGCCTTTGCA--G-------...............................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................CTTTGCA--G-------AGGGTA-TGTTAAT.................................................................................................................................................................................................................................................2111.0010100
droYak3
TTTGC-----ACT--TCCACCAG-CTGAGTAACGGGTATCAGATAGTC-GG----------------------------------------------------GGAACTCG--ACTA---------T-----------AGAGT--T---------------------CTA----------------------------------------------------------------------------T-CGTGTTTTTATACCCG-TTGT------------------TCGTA--GAG-TAAAAGGGTA-TACTAGATTCGT--TA-----AATAGTATGTAACAGGCAGAAAGAAGCGTTTCCGACCATA-T-----------------------AAA------------GTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTGGCCAT-GTCTGTCTGTCCGTCTGTCTGTCC----GTCCGT----------------ATGAACGCTGAGATCTCAGGAACTACAAAAGCTACAAAGTTGAGATTAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..TGC-----ACT--TCCACCAG-CTGAGTAACGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15303000000000
.................CACCAG-CTGAGTAACGGGTATCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCTGTCC----GTCCGT----------------ATGAA............................................28200.10202000000000
......................................................................................................................................................................................................................................................................................................GAG-TAAAAGGGTA-TACTAGATTCGT--..........................................................................................................................................................................................................................................25200.10200200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTGGCCAT-GTCTGTCTG..........................................................................................25170.06101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGCCGAG.................................................................................................................21200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCC----GTCCGT----------------ATGAACGCTGAGATC..................................25200.05101000000000
TTTGC-----ACT--TCCACCAG-CTGAGTAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................GCAGAAAGAAGCGTTTCCGACCATA-..........................................................................................................................................................................................25200.05100100000000
......................................................................................................................................................................................................................................................................................................................................................CAGGCAGAAAGAAGCGTTTCCGA................................................................................................................................................................................................23200.05100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAT-GTCTGTCTGTCC.......................................................................................19200.05110000000000
................CCACCAG-CTGAGTAACGGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000010000
...................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAAGAAGCGTT.....................................................................................................................................................................................................21200.05100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCTCAGGAACTACAAAAGCT................25200.05101000000000
..........................................ATAGTC-GG----------------------------------------------------GGAACTCG--AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
............................................................................................................................................................................................................................................................................T------------------TCGTA--GAG-TAAAAGGGTA-TACTAGAT................................................................................................................................................................................................................................................27200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAAGAAGCGTTT....................................................................................................................................................................................................21200.05100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTGGCCAT-GTCTGT.............................................................................................24200.05100100000000
droEre2
TAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATATACCCTAGCA--G-------CGGGTCCTTATCAATTTGG--TC-----AGACGCTTGCAACGCCGCGAAGAGTA---TTCCAATCTTG-T-----------------------AACGTAGATGATATAGTATATATA----------------------------ATATAAGCAT-GTCCGTATGTTTGTCTGTCTGTCT----GTCGTT----------------GAGCAAACCAGTAACTCA----ATTTTGAAGCCATCTGGTTGAAACTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
ATTTG-----CTG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------CA-------A-----------AATGAG-TATTGGGGTA-TATTAGATTTGTAGTGAAAATGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCA-T-----------------------AAA------------GTATATATATTCTTGATCAGCATCAATAGCCGAGT----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................242013.652730950000017800
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGCCGAGT----------------------------------------------------------------------------------------------------------------22205.70114011400000000
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................25204.659310001000910
.....................................................................................................TC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------CA-------A-----------AA........................................................................................................................................................................................................................................................................2312.0020200000000
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................27200.80160700004050
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAG.....................................................................................................................................................................................................................................................................................................................................................23200.70140000000770
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAG.....................................................................................................................................................................................................................................................................................................................................................24200.60120100000650
................................................................................AA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................23200.601201200000000
............................................................................................................................................................................................................................................................................................................................TTTGTAGTGAAAATGGATGTGTGT.........................................................................................................................................................................................................................2490.5650100001030
.........................................................................................................................................................................................................................T----------------------------------------------------CA-------A-----------AATGAG-TATTGGGGTA-TA......................................................................................................................................................................................................................................................22200.551101100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATAGCCGAG.................................................................................................................26200.501001000000000
.........................................................................................................................................................................................................................................................................................................................................................CCAGAAGGAATCGTTTCCGACCCC............................................................................................................................................................................................24200.4080800000000
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACT.......................................................................................................................................................................................................................................................................................................................................................24200.4080400000130
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGAC........................................................................................................................................................................................................................................................................................................................................................23200.3570500000020
.............................................................................................................................................................................................................................................................................................................TGGGGTA-TATTAGATTTGTAG..........................................................................................................................................................................................................................................2160.3320000000020
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------...............................................................................................................................................................................................................................................................................................25200.3060000000060
.............................................................................CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................26200.3060000000420
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------C..............................................................................................................................................................................................................................................................................................26200.2550100000400
..............................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAAGGAA..........................................................................................................................................................................................................21200.2550500000000
...............................................................................................................................................................................................................................................................................................................................................TGTGTAACGTCCAGAAGGA...........................................................................................................................................................................................................19200.2550500000000
.........................................................................................................................................................................................................................T----------------------------------------------------CA-------A-----------AATGAG-TATTGGGGTA-TATTAG..................................................................................................................................................................................................................................................26200.2040400000000
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAG.....................................................................................................................................................................................................................................................................................................................................................26200.2040400000000
.....................................................................................................................................................................................................................................................................................................TGAG-TATTGGGGTA-TATTAG..................................................................................................................................................................................................................................................20200.2040000000040
.......................................................................................................................................................................................................................GCT----------------------------------------------------CA-------A-----------AATGAG-TATTGGGGT..........................................................................................................................................................................................................................................................2160.1710010000000
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCA----------------------------------------------------...............................................................................................................................................................................................................................................................................................25200.1530300000000
......................................................CC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................28200.1530101000010
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGAC........................................................................................................................................................................................................................................................................................................................................................21200.1530100001100
.....................................................................................................................................................................................................................................................................................................................TATTAGATTTGTAGTGAAAATGGATG..............................................................................................................................................................................................................................2670.1410000000010
............................................................................................................................................................................................................................................................................................................................TTTGTAGTGAAAATGGATGTGTGTA........................................................................................................................................................................................................................2580.1310100000000
............................................................................................................................................................................................................................................................................................................................TTTGTAGTGAAAATGGATGTGTG..........................................................................................................................................................................................................................2390.1110100000000
............................................................................................................................................................................................................................................................................................................................TTTGTAGTGAAAATGGATGTGT...........................................................................................................................................................................................................................2290.1110100000000
............................................................................................................................................................................................................................................................................................................................TTTGTAGTGAAAATGGATGT.............................................................................................................................................................................................................................2090.1110100000000
......................................................CC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAG..........................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
................................................................................AA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAG.....................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
......................................................CC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGAC........................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATTCTTGATCAGC..............................................................................................................................20200.1020101000000
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTA......................................................................................................................................................................................................................................................................................................................................................25200.1020000000200
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------C..............................................................................................................................................................................................................................................................................................27200.1020020000000
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACT.......................................................................................................................................................................................................................................................................................................................................................22200.1020000000200
...........TG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGA...........................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................T-----------------------AAA------------GTATATATATTCTTGATCAG...............................................................................................................................24200.0510000000100
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------...............................................................................................................................................................................................................................................................................................28200.0510100000000
..TTG-----CTG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAG............................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCCA-T-----------------------AAA------------GTATA..............................................................................................................................................24200.0510000000100
.TTTG-----CTG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGT................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
...TG-----CTG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGT................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...TG-----CTG----------------------------------------CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTG..............................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................GAATCGTTTCCGACCCCA-T-----------------------AAA------------GTATAT.............................................................................................................................................28200.0510100000000
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTA......................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCT----------------------------------------------------...............................................................................................................................................................................................................................................................................................26200.0510100000000
.....................................................CCC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACT.......................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGT....................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACT.......................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGG....................................................................................................................................................................................................................................................................................................................................................24200.0510000000010
.................................................................................A---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGC....................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTA......................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
...............................................................................TAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGAC........................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
................................................................................AA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACT.......................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAG..........................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGCCGAG.................................................................................................................19200.0510100000000
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGA....................................................................................................................................................................................................................................................................................................................................................27200.0510000000010
......................................................CC---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGA...........................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................C---------------------CTTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAA..........................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
..............................................................................TTAA---------------GGAATC---------------------------------------------------------------------------------------------------TGTTGAGAGACTAGCA----------------------------------------------------A..............................................................................................................................................................................................................................................................................................27200.0510000000100
droPer2
ATTGC-----TTC----------------------------------------------------------------------------C----------------------------------TCTTTTTG-GGGAA---------TTCTATAATT----------------------------------------------------------------------------------------------------ATACCCG-ATACTCA-------A-----------AATGAG-TATTGGGGTA-TATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCA-T-----------------------AAA------------GCATATATATTCCTGATCAGCATCAATAGCCGAGCCGATTGAGCCAT-GTCTGTCT----------------GTCCGTCCGT----------------CCGTCTGTCCGTCCC----------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATTGAGCCAT-GTCTGTC............................................................................................2170.141000001
.....................................................................................................................................................................................................................................................................................................................................................ACGTCCAGAAGGAATCGTTTCCGACCC.............................................................................................................................................................................................27200.102020000
......................................................................................................................................................................................................................................................................................................................................................................TTTCCGACCCCA-T-----------------------AAA------------GCATA..............................................................................................................................................21170.061010000
droWil2
ACAAT-----ATA--TATCAAAA------T--AAT-----------T-GAAAGAACAATCGTATTGTTCTATATATACCTAA---------------GTAGTT---------------------------------------------------------------------------------------------------GG---------------------------CC-------------AGGAA------TG-CATCA-----------TTGTTATACCCTTGCA--A-----AAAGGGTA-TATTAATTTTGG--TC-----AGAAGTGTGCAACGCATAGAAGGAAACATCTCCGACCAAA-G--------TA-------------AAA------------GTATATATATTCTTGATCAGCACGACGAGACGAGTT-----------------------------------C----GAATTA----------------ACGCAAACTCCTCCTAGA----CCGTAAGAGCTACA-----GAGCTTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------C----GAATTA----------------ACGCAAACTCCTCCTAGA----C..........................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCACGACGAGACGAGTT-----------------------------------C----GAAT...................................................................28190.11202000
....................................................................................................................................................................................................................................................................................................................................C-----AGAAGTGTGCAACGCATAGAAGG............................................................................................................................................................................................................24200.10202000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCACGACGAGACGAGTT-----------------------------------C----G......................................................................26200.05101000
......................................................................................................................................................................................................................................................................................................................ATTAATTTTGG--TC-----AGAAGTGTGCA........................................................................................................................................................................................................................24200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGA----CCGTAAGAGCTACA-----GAG.....21200.05101000
..........................................................................................................................................................................................................................................................................................................................................AGAAGTGTGCAACGCATA.................................................................................................................................................................................................................18200.05100010
droVir3
ACATT-----ATG--GATGTGTA------T--TAT-----------TT-AA----------------------------------------------------TGAAAT--TAATTAT--------------------------------------------------------------------TTCGAACAAAAATATT---------------------------TTTGAATA---------T-AAT---------TTTTT-----------TTTTTATACCCTTGCA--G-------AGGGTA-TTATAATTTTGT--CG-----TGAAATGTGTAACCCATAGAAGGAGACATCTCCGACACCA-T-----------------------AAA------------GTATATATATTCTTAATCAGCATCAGCAGCCGAGTCGATATAGCAATAGTCCGTCT----------------GTCTGTTTCT----------------ATGCGAACTAGTCCCTCA----GTTTTATAGCTATCTTAATGAAACTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................AAATGTGTAACCCATAGAAGGAGACA.......................................................................................................................................................................................................2632.006000000021030000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAATGTGTAACCCATAGAAGGAGAC........................................................................................................................................................................................................2530.331000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAATGTGTAACCCATAGAAGGAGACATC.....................................................................................................................................................................................................2830.331000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTAGTCCCTCA----GTTTTATAGCTA...............2770.292000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ACACCA-T-----------------------AAA------------GTATATATATTCTTAATC.................................................................................................................................2850.201000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTAATCAGCATCAGCAG......................................................................................................................2650.201000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAATGTGTAACCCATAGAAGGAGC.........................................................................................................................................................................................................2450.201000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCAGCAGCC....................................................................................................................2650.201001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAGCATCAGCAGCCGAGTCGATA...........................................................................................................2750.201000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTGCA--G-------AGGGTA-TTATAATTTTGT--CG-----...................................................................................................................................................................................................................................26200.153000000000000000000000000000020010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAACTAGTCCCTCA----GTTTTATA...................2570.141000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ACATCTCCGACACCA-T-----------------------AAA------------GTATATA............................................................................................................................................2680.131000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT----------------ATGCGAACTAGTCCCTCA----GTTT.......................26200.102000000000000000000000000000020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT----------------ATGCGAACTAGTCCCTCA----GTTTTA.....................26200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TTGT--CG-----TGAAATGTGTAAC......................................................................................................................................................................................................................19200.051000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCT----------------ATGCGAACTAGTCCCTCA----G..........................26200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................T-----------------------AAA------------GTATATATATTCTTAATCAGCA.............................................................................................................................26200.051000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TTATAATTTTGT--CG-----TGAAATGTGT.........................................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGCA--G-------AGGGTA-TTATAATTTTGT--CG-----TG.................................................................................................................................................................................................................................27200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TTATAATTTTGT--CG-----TGAAATGTG..........................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTAATCAGCATC...........................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT----------------ATGCGAACTAGTCCCTCA----GTT........................23200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT----------------ATGCGAACTAGTCCCTCA----GTT........................24200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT----------------ATGCGAACTAGTCCCTCA----GTTTTA.....................27200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TCTCCGACACCA-T-----------------------AAA------------GTAT...............................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT----------------ATGCGAACTAGTCCCTCA----...........................21200.051000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CTCCGACACCA-T-----------------------AAA------------GTATATATA..........................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
CAATC-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCGTTTCATTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACCCATTGA---A-----------AATGGGAAATCAGGGTA-TAATGGTTTTG---TT-----AAAAGTATGTAACAGGCAGAAGAAGGCATGGCAGACCCCA-C-----------------------AAA------------GTATATATATTCTCTATCAGGGCGACGAGCTGAGTCGATTTGGCTCT-GTCCGTCT----------------GTCTGTCCGTCCGTCCGTCCGTATGTATGAACGCGTCGATCTCAGAAGATATAAGAGCTAGAGACTTGAAATTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....C-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCGT......................................................................................................................................................................................................................................................................................................................................................................................................2513.003100020
....C-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
...TC-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCGT......................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.AATC-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
....C-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTC........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..ATC-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
....C-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCG.......................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....C-----ATC------TGGTC--------TCT-----------C------------------------------------------------------------------------------------------------------------TCTTGCTCTCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
......................................................................................................................................................................TTTCATTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAAC................................................................................................................................................................................................................................................................................................2630.331100000
........................................................................................................................................................................TCATTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACC...............................................................................................................................................................................................................................................................................................2540.251000010
........................................................................................................................................................................TCATTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACCC..............................................................................................................................................................................................................................................................................................2640.251000010
.......................................................................................................................................................................TTCATTTATTT------ATT----------------------------------------------------------------------ATACCC......................................................................................................................................................................................................................................................................................................2040.251000010
.............................................................................................................................................................................................................................................................................CCATTGA---A-----------AATGGGAAATCAGGGT..........................................................................................................................................................................................................................................................24200.153300000
...............................................................................................................................................................................................................................................................................................................................................................................CCA-C-----------------------AAA------------GTATATATATTCTC.....................................................................................................................................2180.131000010
...........................................................................................................................................................................TTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACCC..............................................................................................................................................................................................................................................................................................23160.061000010
...........................................................................................................................................................................TTTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACCCATT...........................................................................................................................................................................................................................................................................................26160.061100000
............................................................................................................................................................................TTATTT------ATT----------------------------------------------------------------------ATACCCT-GAACCCATT...........................................................................................................................................................................................................................................................................................25200.051100000
droGri2
AATTT-----ATA------GTGTA-----T--TCT-----------T-------------------------------TT-----------------------C----------------------------------AAAATATTA------------------------------------------------------------------------------------------------------------------C--------------TCATTTTCTCCTTGTG--G-------AGCGTA-TTATAATTA------A-----TGAACTTTGTTACGCCTTGAAGAAGACGTCTTTGACCCCATT-----------------------AAG------------TTACATATATTCTTGATATGCAACACTATCTGAGTCGACATAA----------------------------------------------------------CAAACTTGTCACTTA----GTCTTGAAGTTATCTGAATGAAACTTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................ATTA------A-----TGAACTTTGTTAC......................................................................................................................................................................................................................1811.00110

Generated: 05/17/2015 at 10:04 PM