ID:

dan_3367

 Coordinate:

scaffold_13499:1173669-1173819 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.4 -27.4 -27.4

Flybase annnotation

exon [dana_GLEANR_42:1]; CDS [Dana\GF20963-cds]; intron [Dana\GF20963-in]; Antisense to intron [Dana\GF12191-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-22_DYa-I-intLTRGypsy-
mature
  1. scaffold_13034:1604444-1604461 +
  2. dan_3367  scaffold_13499:1173711-1173728 -
  3. scaffold_13499:1329191-1329208 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACCCCAGACTGCAGCGTGTAGAGATACCTACAAACATAAAAACGCGTGCTGAACTGTAACAACAAGTCAAGGCACACACGTTCAGCAGAAATGTAGAATTTTCTGGATCAGAGGGACCGGAAAAGAAGAGATTCAAAATGCAGACGCCGATTAGATGCCATAATTGCGGGAAACTTGGACAAAAGGCAATGGAGTGTCGCAAGAGGAGAACAGAAGAA
**************************************************((((......))))............((((((((((((((..................))).))))))))...........((((((((.((.....))))))))))(((....)))..........)))((((((.......))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 V055
head
 M058
embryo
 V106
head
..........................................................................................................................................................................................................................GCAATGGAGGGACGCAGGAGG............ 21 3 20 7.80 156 0 142 5 0 9
...........................................................................................................................................................................................................................CAATGGAGGGACGCAGGAGG............ 20 3 20 5.15 103 102 0 0 1 0
....................................CCAGACTGCAGCGTGTAGAGATACCTAC........................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
........................................................................AAACGCTGGCTGAACTGTATC.............................................................................................................................................................. 21 3 2 0.50 1 0 0 1 0 0
.............................................................................................................................................CAGAGGGACCGGAAAAGA............................................................................................ 18 0 3 0.33 1 1 0 0 0 0
.........................................................................AACGCGTGCTAAAGTGTAA............................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0
..........................................................................................................................................................................................GATGCCATAATTGCGGGAAACTTGGAC...................................... 27 0 5 0.20 1 1 0 0 0 0
............................................................................................................................................................................................TGCCATAATTGCGGGAAACTTGGA....................................... 24 0 5 0.20 1 1 0 0 0 0
............................................................................................................................TGTAGAATTTTCTGGATCAGAAGGACC.................................................................................................... 27 1 6 0.17 1 0 0 0 1 0
.....CTAGTCTTGGCTCATGCATCCC................................................................................................................................................................................................................................ 22 0 20 0.15 3 0 0 0 3 0
........................................................................................................................................................................................TAGATGCCATAATTGCGGGTT.............................................. 21 2 9 0.11 1 1 0 0 0 0
...............................................................................................................................................................AGAGATTCAAAATGCAGACGCCG..................................................................... 23 0 20 0.10 2 2 0 0 0 0
............................................................................................................................................................................................................................AATGGAGGGACGCAGGAGGA........... 20 3 20 0.10 2 0 2 0 0 0
............TGGCTCATGCATCCCAAATTGACCCCAGA.................................................................................................................................................................................................................. 29 0 12 0.08 1 1 0 0 0 0
................TCATGCATCCCAAATTGACCCCAG................................................................................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0
.........TCTTGGCTCATGCATCCCAAATTGACCC...................................................................................................................................................................................................................... 28 0 14 0.07 1 0 0 0 1 0
.............GGCTCATGCATCCCAAATTGACC....................................................................................................................................................................................................................... 23 0 14 0.07 1 0 0 0 1 0
.............GGCTCATGCATCCCAAATTGACCCC..................................................................................................................................................................................................................... 25 0 14 0.07 1 1 0 0 0 0
.........................CCAAATTGACCCCAGACTGCAGCGTG........................................................................................................................................................................................................ 26 0 15 0.07 1 1 0 0 0 0
...................TGCATCCCAAATTGACCCCAGACTGC.............................................................................................................................................................................................................. 26 0 15 0.07 1 1 0 0 0 0
.........................CCAAATTGACCCCAGACTGCAGC........................................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0
..........................CAAATTGTCCCCAGAATGCAGCGTG........................................................................................................................................................................................................ 25 2 16 0.06 1 1 0 0 0 0
........................CCCAAATTGACCCCAGACTGCAGCG.......................................................................................................................................................................................................... 25 0 16 0.06 1 1 0 0 0 0
..............................................................................................................................................GGGGGGACCGGAAAAGAGGA......................................................................................... 20 3 18 0.06 1 0 0 0 1 0
...................TGCATCCCAAATTGACCCCA.................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................................................................................GCAATGGAGCGACGCAGGAGG............ 21 3 20 0.05 1 0 0 1 0 0
TATCCCTAGTCTTGGCTCATGCATCCC................................................................................................................................................................................................................................ 27 0 20 0.05 1 0 0 0 1 0
..............................................................................................................................................................AAGTGATTCAAAATGCAGACGCC...................................................................... 23 1 20 0.05 1 0 0 0 1 0
.ATCCCTAGACTTGGCTCATGCAT................................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................GAAGAGATTCAAAATGCAGACGCCG..................................................................... 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................................GCAATGGAGGGTCGCAGGAGGC........... 22 3 20 0.05 1 0 1 0 0 0
..TCCCTAGTCTTGGCTCATGCATCCC................................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................ATGCAATGGAGTGTCGCAAGAGG............ 23 1 20 0.05 1 0 0 0 1 0
...................................................................AATAAAAGCGTGTGCTGAAC.................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1 0
TATCCCTAGTCTTGGCTCATGCATC.................................................................................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 1 0
TATCCCTAGTCTTGGCTCATGCATCC................................................................................................................................................................................................................................. 26 0 20 0.05 1 0 0 0 1 0
.ATCCCTAGTCTTGGCTCATGCATCCC................................................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ATAGGGATCAGAACCGAGTACGTAGGGTTTAACTGGGGTCTGACGTCGCACATCTCTATGGATGTTTGTATTTTTGCGCACGACTTGACATTGTTGTTCAGTTCCGTGTGTGCAAGTCGTCTTTACATCTTAAAAGACCTAGTCTCCCTGGCCTTTTCTTCTCTAAGTTTTACGTCTGCGGCTAATCTACGGTATTAACGCCCTTTGAACCTGTTTTCCGTTACCTCACAGCGTTCTCCTCTTGTCTTCTT
**************************************************((((......))))............((((((((((((((..................))).))))))))...........((((((((.((.....))))))))))(((....)))..........)))((((((.......))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V055
head
 V039
embryo
..............................................................................................TGTTCAGTTCCGTGTGTGCAAGT...................................................................................................................................... 23 0 1 2.00 2 1 1 0 0
......................................................................................................................................................................................................CGCCCTTTGAACCTGTTTTCCGTTAC........................... 26 0 1 1.00 1 0 1 0 0
.............................................................................................................................................GTCTCCCTGGCCTTTTCTTCTCTAAG.................................................................................... 26 0 3 0.33 1 1 0 0 0
..............................................................................................................................................TCTCCCTGGCCTTTTCTTCTCTAAG.................................................................................... 25 0 3 0.33 1 1 0 0 0
..............................................................................................................................................TCTCCCTGGCCTTTTCTTCTCTAAGTT.................................................................................. 27 0 3 0.33 1 1 0 0 0
.........................GGTTTAACTGGGGTCTGACGTCGCAC........................................................................................................................................................................................................ 26 0 15 0.27 4 4 0 0 0
..........................................................................................................................................................................................CTACGGTATTAACGCCCTTTGAAC......................................... 24 0 5 0.20 1 0 1 0 0
.....................GTAGGGTTTAACTGGGGTCTGACGT............................................................................................................................................................................................................. 25 0 15 0.20 3 3 0 0 0
............................................................................................................................................................................................ACGGTATTAACGCCCTTTGAACCTGT..................................... 26 0 5 0.20 1 1 0 0 0
......................................................................................................................................................................................................................TTTAGGTGACCTCACAGCGTT................ 21 3 6 0.17 1 0 0 1 0
........................................................................................................................................................................................................................TCCGTTACCTCACAGCGTTCTCCTCT......... 26 0 20 0.15 3 1 2 0 0
..............................................................................................................................................................................................GGTATTAACGCCCTTTGAACCTGT..................................... 24 0 7 0.14 1 1 0 0 0
...............................................................................................................................................................................CTGCGGCTAATCTACGGTATTAACGCCC................................................ 28 0 8 0.13 1 1 0 0 0
....................CGTAGGGTTTAACTGGGGTCTG................................................................................................................................................................................................................. 22 0 18 0.11 2 0 2 0 0
.............................................................................................................................................................CTTCTCTAAGTTTTACGTCTGCGGCT.................................................................... 26 0 20 0.10 2 1 1 0 0
...............................................................................................................................................................................................................................CCTCACAGCGTTCTCCTCTTGTCTT... 25 0 20 0.10 2 2 0 0 0
.............................................................................................................................................................................................................................TACCTCACAGCGTTCTCCTCTTGTCTT... 27 0 20 0.10 2 2 0 0 0
...........................................................................................................................................................................................................................GTTACCTCACAGCGTTCTCCTCTTGT...... 26 0 20 0.10 2 2 0 0 0
..............CGAGTACGTAGGGTTTAACTGGGG..................................................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0
...................ACGTAGGGTTTAACTGGGGTCTGACG.............................................................................................................................................................................................................. 26 0 15 0.07 1 1 0 0 0
...................ACGTAGGGTTTAACTGGGGTCTGACGT............................................................................................................................................................................................................. 27 0 15 0.07 1 1 0 0 0
........CAGAACCGAGTACGTAGGGTTTAACT......................................................................................................................................................................................................................... 26 0 15 0.07 1 1 0 0 0
................................................................................CGTCTTGGCATTGTTGTT......................................................................................................................................................... 18 2 15 0.07 1 0 1 0 0
.......................TGGGTTTAACAGGGGTCTTACGTCGCA......................................................................................................................................................................................................... 27 3 16 0.06 1 1 0 0 0
...............................ACTGGGGTCTGACGTCGCACA....................................................................................................................................................................................................... 21 0 18 0.06 1 1 0 0 0
.................GTACGTAGGGTTTAACTGGGGTCTG................................................................................................................................................................................................................. 25 0 18 0.06 1 1 0 0 0
.................GTACGTAGGGTTTAACTGGGGTCTC................................................................................................................................................................................................................. 25 1 18 0.06 1 1 0 0 0
.................GTACGTAGGGTTTAACTGGGGTCT.................................................................................................................................................................................................................. 24 0 18 0.06 1 1 0 0 0
...............................ACTGGGGTCTGACGTCGCACAT...................................................................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0
.......................AGGGTTTAACTGGGGTCTGACGT............................................................................................................................................................................................................. 23 0 19 0.05 1 0 1 0 0
........................GGGTTTAACTGGGGTCTGACGT............................................................................................................................................................................................................. 22 0 19 0.05 1 1 0 0 0
...............................................................................................................................................................................CTGCGGCTAATCTACGGTATTAACGC.................................................. 26 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................................................................................ACCTCACAGCGTTCTCCTCTTGTCTT... 26 0 20 0.05 1 1 0 0 0
ATAGGGATCAGAACCGAGTACGTAGG................................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
................................................................................................................................................................CTCTAAGTTCTACGTCTGCGGCTAAT................................................................. 26 1 20 0.05 1 0 1 0 0
........................................................................................................................................................................................................................TCCGTTACCTCACAGCGTTCCCCTCTTGT...... 29 1 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TTACGTCTGCGGCTAATCTACGGTA......................................................... 25 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................................................................TTACCTCACAGCGTTCTCCTCTTGTCTT... 28 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TTACGTCTGCGGCTAATCTACGGTATT....................................................... 27 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................TACGTCTGCGGCTAATCTACGGTAT........................................................ 25 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................................GTTACCTCACAGCGTTCTCCTCT......... 23 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................CCTCACAGCGTTCTCCTCTTGTCTTCT. 27 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................TTCTCTAAGTTTTACGTCTGCGGCT.................................................................... 25 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................GTCTGCGGCTAATCTACGGTATTAAC.................................................... 26 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................................CCGTTACCTCACAGCGTTCTCCTCGT........ 26 1 20 0.05 1 0 1 0 0
...........................................................................................................................................................................................................................GTTACCTCACAGCGTTCTCCTCTTGTG..... 27 1 20 0.05 1 1 0 0 0
............................................................................................................................................................................................................................TTACCTCACAGCGTTCTCCTCTTGT...... 25 0 20 0.05 1 0 1 0 0
........................................................................................................................................................................................................................CCCGTTACCTCACAGCGTTCTCCT........... 24 1 20 0.05 1 0 1 0 0
..AGGGATCAGAACCGAGTACGTAG.................................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TTACGTCTGCGGCTAATCTACG............................................................ 22 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................ACCTCACAGCGTTCTCCTCTTGTCTTCTT 29 0 20 0.05 1 1 0 0 0
........................GGGTTTAACGGGGGTCTGACGT............................................................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0
................................................................TGTGTATTTTTACGGACGAC....................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1
....GGATCAGAACCGAGTACGTAGGGTTT............................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................CCTCACAGCGTTCTCCTCTTGTCT.... 24 0 20 0.05 1 0 1 0 0
...........................................................................................................................................................................................................................GTTACCTCACAGCGTTCTCCTCTTGTCT.... 28 0 20 0.05 1 1 0 0 0
.................GTACGTAGGGTTTAACTGGGGT.................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13499:1173619-1173869 - dan_3367 TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACCCCAGACTGCAGCGTGTAGAGATACCTACAAACATAAAAACGCGTGCTGAACTGTAACAACAAGTCAAGGCACACACGTTCAGCAGA---------A-ATGTAGAATTT-TCTGGATCAGA---GGGACCGGAAAAGAAGAGATTCAAAATGCAGACGCCGATTAGATGCCATAATTGCGGGAAACTTGGACAAAAGGCAATGGAGTGTCGCA------AGAGGAGAACAGAAGA--A
droBip1 scf7180000394917:5296-5546 - TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACTCTAGACTGCAGCGTGTAGCGTTCACCACAAACATAAAAACGCGTGCTGAACTGCAACAACAACTTAAGGCACACACGTTCAGCAGA---------A-ATGTAGAATTT-TCTGGATCAGA---GGGACCCGAAAAGAAAAGGTTCAAAATGCAGACGCCGATTAGATGTCATAATTGCGGGAAACTTGGACATAAGGCAATGGAGTGTCGCA------AGAGGAGAACAGAAGA--G
droKik1 scf7180000302388:2056254-2056506 + TATCGTTGGTCCTAGCTCATACATCCCAAATTGATTCCAGACTGCAGAGATTAGTGTTTACAACAAATCTAAAAACACGTGCGGAGCTACAACAACAACTGAAAGCTCATACGTTCGC-AAA---------A-AATCTGAATAC-TCTGGAATGGAGCAAGGCCCGGAAAAGAAGAGGTTCAAGACGCAAACGCCGATAAAATGCCATAGTTGTGGAAAACTTGGACACAAAGCAATGGAGTGCCGCA------AGAGAAAAGCAGAGGA--A
droFic1 scf7180000453931:5975-6230 + TATCATTGGTTTTGGCGCATACATCGCAAATTGATCCCAGACTGCAACGTCTAGTTTTTACAACAAACGTAAAAACACGAACAGAGCTACAACAACAACTCAAAGCTCACTCGTTCGCCAGA---------A-AATCCGAAGTC-CTCGGATCGGAGCGGGGCCCTGAAAAGAAGAGGATGAAAATGCTAACACCGATAAGATGTCACAATTGTGGTAAACTCGGACATAAGGCAATGGAGTGTCGCA------AGCGGAAAACGGACGATAG
droEle1 scf7180000486364:7807-8059 - TATCGTTGGTTCTGGCACATTCGTCGCAAATTGATTCCAGACTGCAGCGAATAGTGTTTAC-ACAAACATAAAGACAAGAGCGGAGCTACAACAACAACTCAAAGCGCATACGTTCGTCAGA---------A-ATTCAGAATTC-TCTGGAATGGACATGGGCCCCGAGAAGAAGAGGTTTAAAATGCAAACGCCGATTAGATGCCATAGTTGCGAAAAGCTGGGGCACAAAGCAATAGAGTGTCGCA------GGAGGAAAGCAGAAGA--G
droRho1 scf7180000779179:2960-3213 + TATCATTGGTCCTGACACATACAGCGCAAATTGATTCCAGACAGCAGCGTCTAGTGCTTACGACAAACATAAAGACACGTGCGGAGCTACAACAACAACTCAAAGCTCACACGTTCGTCAGA---------A-ACTCGGAATTC-TCTGGAATTGAACAAAGCCCCGAGAAGAAGAGATTCAAAATGCAGACACCGATTAGATGGCGCAGTTGCGGAAAACTCGGACACACGGCAAAAGAGTGCCGAA------AGAGAAAAGCAGAAGA--G
droBia1 scf7180000299843:9801-10051 + TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACCCTAGACTGCAGCGTGTAGCGTTCACCACAAACATAAAAACGCGTACTGAACTGCAACAACAACTCAAGGCGTACACGTTCAGCAGA---------A-ATGTAGAATTT-TCTGGATCAGA---GGGACCCGAAAAGAAGAGGATCAAAATGCAGACGCCGATTAGATGGCATAATTGCGGGAAACTTGAACATAAGGCAATGGAATGTCGCA------AGAGGAGAACAGACGA--G
droTak1 scf7180000410961:13476-13729 + TTTCATTAGTGTTGGCCCACACGTCCCAAATCGAGCCCAGACTGCAAAGTTCCGTTTTCACTACAAACATAAAAACTCGGAATGAACTGCAGCAGCTCTTAAAGGCGTTTGCATTCAACAAA---------G-TGAGCGACTAC-TCTGGATTGGATCAAGGACCGGACAGGAAGAAGTTTAAGGCGCAGGCGCAAATCAAATGTCATTATTGCGGCAAGATAGGACATAAAGCGTTTGAGTGCCGCA------AGAAGAAGGAAGAAGA--A
droEug1 scf7180000409155:86695-86934 - TATCCCTAGTCTTGGCTCATTCATCACAAACTGACCCTAAACTGCAGTGCGTAGCGTTCACCACAAACATTAAAACACGTACTGATCTACAATAAGAACTCAAGGCGCACTCGTTCAGCAGA---------A-ATCTATAACTT-TCTGGAAAGGA---GGGCCCCGAATGAAGGAGGTTCAAAA-----------ATTAGATGTCATAATTGCAGAACACTTTGACATAAGGCAAAAGAATATCGCA------AAAGAAGAACAGAAGA--G
dm3 chr2RHet:1804815-1805060 + TATCATTGGTCCTGGCACATACATCGCAAATCGACCCCAGACTTCAGCATTTGGTTTTCGAAACGAACGTAAAGACACGAGCGGAGCTACAACAACAACTCAGAGCCCACTCGTTCGTCTGA---------A-ATGTCGAATTC-GCGGGA--------AGGCCCCGAAAAGAAGAGGCACAAAATGCAAACACCGATTAGGTGCCATAATTGCGGTAAAATCGGACACAAGGCAATGGAATGCCGAA------AGAGAAGAGCAGAAGA--G
droSim2 node_25414:18048-18301 - TATCATTGGTCGCGGCACATACATCGCAAATCGACCCCAGACTTCAGCATTTGGTTTTCACAACGAATGTAAAGACACGAGCGGAGCTATAACAACAACTCAGAGCCCACTCGTTCGTCAGA---------A-ATGCCGAATTC-GCTGGAATAGAGCAAGGTCCCGAAAAGAAGAGGCACAAAATGCAAACACCGATTAGATGCCATAGTTGTGGTAAACTCGGACACAAGGCAATGGAGTGCCGAG------AGAGGCTAGCAGAAGA--A
droSec2 scaffold_718:3623-3876 - TATCATTGGTCGCGGCACATACATCGCAAATCGACCCCAGACTTCAGCATTTGGTTTTCACAACGAACGTAAAGACACGATCGGAGCTATAACAACAACTCAGAGCCCACTCGTTCGTCAGA---------A-ATGCCGAATTC-GCTGGAATAGAGCAAGGTCCCGAAAAGAAGAGGCACAAAATGCAAAAACCGATTAGATGCCATAGTTGTGGTAAACTCGGACACAAGGCAATGGAGTGCCGAA------AGAGAAGAGCAGAAGA--A
droYak3 v2_chrUn_4207:4214-4467 - TATCATTGGTCCTGGCACATTCATCGCAAATCGACCCCAGGCTTCAGCATTTGGTTTTCACAACGAACGTAAAGACACGTGCGGAGCTACAACAACAACTCAGAGCCCACTCGTTCGTCAGA---------A-ATGCCGAATTC-GCTGGGATTGAGCAAGGCCCCGAAAAGAAAAGGCACAAAATGCAAACACCGATTAGACGCCATAGTTGCGGTAAACACGGACACAAGGCAATGGAGAGCAGAA------AGAGAAGAGCAGAAGA--G
droEre2 scaffold_4929:25033295-25033514 - TAAT------------------------AATTAATTCCACACTCCAGCGTTTACAATTTACAACAAATATAAAGACACTAGCGGAGCTACAACAACAATTCAAGGCTCACACATTCATCAGA---------A--TGGCGAATTC-TGTGGAATTAATCAAGGCCCCGAAAAGAAGAGGCAGGAAATTCAAACACTG-CTGGATGCAATTGTCGCGGAAAA--------CAAGGCAATAGAGAGCCGAA------GGAGAAGAGCATAAGA--G
dp5 Unknown_group_308:8705-8958 - TGTCTGATGTGCTCGCTCATACGTCTAAAATAGACAACAGATTGCAGCGCTTGA-----ATATTCAATATCAGAACACGTAGCGAATTGGAGCAGTAGTTACGAGCGTTTGCGTTTGGTAAACGGAGTGTAC-T----GATACG-GCAGATCGAGGTCATGGCACTGAACGAAAGAAGCAAAAATTGACATAGCATATACGGTGCCATTCTTGTGGCAAAGTTGGACACAAAATTGCAGAGTGCCGAG------ACAGGAGAGCTGGAGA--G
droPer2 scaffold_101:126558-126817 + TGTCTGATGTGCTCGCTCATACGTCTAAAATAGACAACAGATTGCAGCGCTTGATATTCACCACCAATATCAGAACACGTAGCGAATTGGAGCAGTAGTTACGAGCGTTTGCGTTTGGTAAACGGAGTGATCAGTA----TACG-GCAGATCAAGGTCATGGCACTGAACGAAAGAAGCAAAAATTGACATCGCATATACGGTGCCATTCTTGTAGCAAAGTTGGACACAAAATTGCAGAGTGCCGAA------ACAGGAGAGCTGGAGA--G
droWil2 scf2_1100000004928:17769-18025 - TTTCCCTAGCTCTGGCCCACATGGCACAAATGGATGACAAATTGTCGCGCTTGGTTTTTACAAACAATATTAAAA------ATGAAATGCAACAACAACTACAAGCGCACACTTTTAAGAAGCGGAACCTAG-ATGACGACTCA-TCTACAA------CAGGCCCGGAGCGTAAAAAGCCTAAGTATCTCTCTCAAGTGAAATGCAACTATTGTGGAAAGTCTGGGCATAAATATGCTGAATGTCGTGCTCGGCAAAGGACACCAATTCA--A
droVir3 scaffold_2127:1055-1311 + TCTCAGTTGTTTTGGCACATACATCGAAAATCGACAAAAGTCTGCAACGTATGTTATATACGACTAATATTAAAAGTCAAGACGAGATGCAACAGCATCTGAAGGCCTATGCTTATGGAAGGTCAAATGGAG-GTCTACAGCCA-AATATCCCAAT---GGAACCAGATCGCAAGAGATCGAAAACATATG---GCATTAAATGTCATCATTGTGGAAACCTCGGACACAAAATGGTCGAATGTCGCA------AGAGGAAGTATGAAGA--A
droMoj3 scaffold_6541:223723-223972 - TTGCTGTCGTGCTGACACATGCATCAAAATTTGACGCAAAATTACAAAAATTAATTTTTACAACAAATGTAAAAATGCGCAATGAAATGCAACAACAATTAAAAGCTTATGCATTTAAACGA---AGCGATC-ATC----TGCCGTCGGGTT------CAGAGCCAGAAAGGAAAAGACAAAAGATGCAAACTCCAAGCAAATGCTTTTACTGTGGGAAAACTGGACACAAGGTAGCCGAGTGCCGTA------AGAAGAAAGCAGACGA---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACCCCAGACTGCAGCGTGTAGAGATACCTACAAACATAAAAACGCGTGCTGAACTGTAACAACAAGTCAAGGCACACACGTTCAGCAGA---------A-ATGTAGAATTT-TCTGGATCAGA---GGGACCGGAAAAGAAGAGATTCAAAATGCAGACGCCGATTAGATGCCATAATTGCGGGAAACTTGGACAAAAGGCAATGGAGTGTCGCA------AGAGGAGAACAGAAGA--ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................CCAGACTGCAGCGTGTAGAGATACCTAC.................................................................................................................................................................................................................2811.001100000
........................................................................................................................................................CAGA---GGGACCGGAAAAGA....................................................................................................1830.331100000
........................................................................................................................................................................................................GATGCCATAATTGCGGGAAACTTGGAC..............................................2750.201100000
..........................................................................................................................................................................................................TGCCATAATTGCGGGAAACTTGGA...............................................2450.201100000
.....CTAGTCTTGGCTCATGCATCCC......................................................................................................................................................................................................................................................22200.153030000
......................................................................................................................................................................................................TAGATGCCATAATTGCGGGTT......................................................2190.111100000
.............................................................................................................................................................................AGAGATTCAAAATGCAGACGCCG.............................................................................23200.102200000
............TGGCTCATGCATCCCAAATTGACCCCAGA........................................................................................................................................................................................................................................29120.081100000
................TCATGCATCCCAAATTGACCCCAG.........................................................................................................................................................................................................................................24130.081100000
.........TCTTGGCTCATGCATCCCAAATTGACCC............................................................................................................................................................................................................................................28140.071010000
.............GGCTCATGCATCCCAAATTGACC.............................................................................................................................................................................................................................................23140.071010000
.............GGCTCATGCATCCCAAATTGACCCC...........................................................................................................................................................................................................................................25140.071100000
.........................CCAAATTGACCCCAGACTGCAGCGTG..............................................................................................................................................................................................................................26150.071100000
...................TGCATCCCAAATTGACCCCAGACTGC....................................................................................................................................................................................................................................26150.071100000
.........................CCAAATTGACCCCAGACTGCAGC.................................................................................................................................................................................................................................23160.061100000
........................CCCAAATTGACCCCAGACTGCAGCG................................................................................................................................................................................................................................25160.061100000
...................TGCATCCCAAATTGACCCCA..........................................................................................................................................................................................................................................20200.051010000
TATCCCTAGTCTTGGCTCATGCATCCC......................................................................................................................................................................................................................................................27200.051010000
...........................................................................................................................................................................GAAGAGATTCAAAATGCAGACGCCG.............................................................................25200.051100000
..TCCCTAGTCTTGGCTCATGCATCCC......................................................................................................................................................................................................................................................25200.051100000
TATCCCTAGTCTTGGCTCATGCATC........................................................................................................................................................................................................................................................25200.051010000
TATCCCTAGTCTTGGCTCATGCATCC.......................................................................................................................................................................................................................................................26200.051010000
.ATCCCTAGTCTTGGCTCATGCATCCC......................................................................................................................................................................................................................................................26200.051100000
droBip1
TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACTCTAGACTGCAGCGTGTAGCGTTCACCACAAACATAAAAACGCGTGCTGAACTGCAACAACAACTTAAGGCACACACGTTCAGCAGA---------A-ATGTAGAATTT-TCTGGATCAGA---GGGACCCGAAAAGAAAAGGTTCAAAATGCAGACGCCGATTAGATGTCATAATTGCGGGAAACTTGGACATAAGGCAATGGAGTGTCGCA------AGAGGAGAACAGAAGA--GSizeHit CountTotal NormTotal
No Reads
droKik1
TATCGTTGGTCCTAGCTCATACATCCCAAATTGATTCCAGACTGCAGAGATTAGTGTTTACAACAAATCTAAAAACACGTGCGGAGCTACAACAACAACTGAAAGCTCATACGTTCGC-AAA---------A-AATCTGAATAC-TCTGGAATGGAGCAAGGCCCGGAAAAGAAGAGGTTCAAGACGCAAACGCCGATAAAATGCCATAGTTGTGGAAAACTTGGACACAAAGCAATGGAGTGCCGCA------AGAGAAAAGCAGAGGA--ASizeHit CountTotal NormTotal
No Reads
droFic1
TATCATTGGTTTTGGCGCATACATCGCAAATTGATCCCAGACTGCAACGTCTAGTTTTTACAACAAACGTAAAAACACGAACAGAGCTACAACAACAACTCAAAGCTCACTCGTTCGCCAGA---------A-AATCCGAAGTC-CTCGGATCGGAGCGGGGCCCTGAAAAGAAGAGGATGAAAATGCTAACACCGATAAGATGTCACAATTGTGGTAAACTCGGACATAAGGCAATGGAGTGTCGCA------AGCGGAAAACGGACGATAGSizeHit CountTotal NormTotal
No Reads
droEle1
TATCGTTGGTTCTGGCACATTCGTCGCAAATTGATTCCAGACTGCAGCGAATAGTGTTTAC-ACAAACATAAAGACAAGAGCGGAGCTACAACAACAACTCAAAGCGCATACGTTCGTCAGA---------A-ATTCAGAATTC-TCTGGAATGGACATGGGCCCCGAGAAGAAGAGGTTTAAAATGCAAACGCCGATTAGATGCCATAGTTGCGAAAAGCTGGGGCACAAAGCAATAGAGTGTCGCA------GGAGGAAAGCAGAAGA--GSizeHit CountTotal NormTotal
No Reads
droRho1
TATCATTGGTCCTGACACATACAGCGCAAATTGATTCCAGACAGCAGCGTCTAGTGCTTACGACAAACATAAAGACACGTGCGGAGCTACAACAACAACTCAAAGCTCACACGTTCGTCAGA---------A-ACTCGGAATTC-TCTGGAATTGAACAAAGCCCCGAGAAGAAGAGATTCAAAATGCAGACACCGATTAGATGGCGCAGTTGCGGAAAACTCGGACACACGGCAAAAGAGTGCCGAA------AGAGAAAAGCAGAAGA--GSizeHit CountTotal NormTotal
No Reads
droBia1
TATCCCTAGTCTTGGCTCATGCATCCCAAATTGACCCTAGACTGCAGCGTGTAGCGTTCACCACAAACATAAAAACGCGTACTGAACTGCAACAACAACTCAAGGCGTACACGTTCAGCAGA---------A-ATGTAGAATTT-TCTGGATCAGA---GGGACCCGAAAAGAAGAGGATCAAAATGCAGACGCCGATTAGATGGCATAATTGCGGGAAACTTGAACATAAGGCAATGGAATGTCGCA------AGAGGAGAACAGACGA--GSizeHit CountTotal NormTotal
No Reads
droTak1
TTTCATTAGTGTTGGCCCACACGTCCCAAATCGAGCCCAGACTGCAAAGTTCCGTTTTCACTACAAACATAAAAACTCGGAATGAACTGCAGCAGCTCTTAAAGGCGTTTGCATTCAACAAA---------G-TGAGCGACTAC-TCTGGATTGGATCAAGGACCGGACAGGAAGAAGTTTAAGGCGCAGGCGCAAATCAAATGTCATTATTGCGGCAAGATAGGACATAAAGCGTTTGAGTGCCGCA------AGAAGAAGGAAGAAGA--ASizeHit CountTotal NormTotal
No Reads
droEug1
TATCCCTAGTCTTGGCTCATTCATCACAAACTGACCCTAAACTGCAGTGCGTAGCGTTCACCACAAACATTAAAACACGTACTGATCTACAATAAGAACTCAAGGCGCACTCGTTCAGCAGA---------A-ATCTATAACTT-TCTGGAAAGGA---GGGCCCCGAATGAAGGAGGTTCAAAA-----------ATTAGATGTCATAATTGCAGAACACTTTGACATAAGGCAAAAGAATATCGCA------AAAGAAGAACAGAAGA--GSizeHit CountTotal NormTotal
No Reads
dm3
TATCATTGGTCCTGGCACATACATCGCAAATCGACCCCAGACTTCAGCATTTGGTTTTCGAAACGAACGTAAAGACACGAGCGGAGCTACAACAACAACTCAGAGCCCACTCGTTCGTCTGA---------A-ATGTCGAATTC-GCGGGA--------AGGCCCCGAAAAGAAGAGGCACAAAATGCAAACACCGATTAGGTGCCATAATTGCGGTAAAATCGGACACAAGGCAATGGAATGCCGAA------AGAGAAGAGCAGAAGA--GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................AACGAACGTAAAGACACGAGCGGAGC..........................................................................................................................................................................................2632.6780000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000100300000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................TAATTGCGGTAAAATCGGACACAAGGC.......................................2722.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATAATTGCGGTAAAATCGGAC..............................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGA---------A-ATGTCGAATTC-GCGGGA--------..................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGCGGTAAAATCGGACACAAGG........................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCTACAACAACAACTCAGAGCCCACT..................................................................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CACGAGCGGAGCTACAACAAC.................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000010000000000000000000000000000000000
.........................................................................GACACGAGCGGAGCTACAACAACAAC..............................................................................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................A---------A-ATGTCGAATTC-GCGGGA--------AG................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................................................................ATGTCGAATTC-GCGGGA--------AGGC..............................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
TATCATTGGTCCTGGCACATACATC........................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GAACGTAAAGACACGAGCGGAGC..........................................................................................................................................................................................2330.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TAAAGACACGAGCGGAGCTACAACA...................................................................................................................................................................................2530.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AGACACGAGCGGAGCTACAAC....................................................................................................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................ATGGAATGCCGAA------AGAGAAG............2030.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGGAATGCCGAA------AGAGAAGAGCAGAA.....2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TCGGACACAAGGCAATGGAATGCCGA..........................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ATTGCGGTAAAATCGGACACAAGGC.......................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AAACGAACGTAAAGACACGAGCGGAGCT.........................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCTACAACAACAACTCAGAGCCCACTCG................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TCGTCTGA---------A-ATGTCGAATTC-GCGG............................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................TACATCGCAAATCGACCCCAGACT......................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CGAAACGAACGTAAAGACACG..................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................CAGCATTTGGTTTTCGAAACG................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................TCGAATTC-GCGGGA--------AGGCCCCGAAAA......................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGTTTTCGAAACGAACGTAAAGACA....................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GGCACAAAATGCAAACACCG.............................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGCGGTAAAATCGGACACAAG.........................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................TGTCGAATTC-GCGGGA--------AGGCCCCGAA........................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CAATGGAATGCCGAA------AGAGAAGA...........2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................TACATCGCAAATCGACCCCAGACTT.....................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................CGTTCGTCTGA---------A-ATGTCGAATTC-GCGG............................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTGGTCCTGGCACATACATCG.......................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................CAATGGAATGCCGAA------AGAGAAGAGCA........2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGGTCCTGGCACATACATCGCAAA...................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TAAAGACACGAGCGGAGC..........................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGTAAAGACACGAGCGGAGCTACAACA...................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGAACGTAAAGACACGAGCGGAGC..........................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGTAAAGACACGAGCGGAGCTACA......................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................AACAACAACTCAGAGCCCACT..................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AACGAACGTAAAGACACGAGC...............................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................CGGAGCTACAACAACAACTCAGAGC.......................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGAACGTAAAGACACGAGCGGAGCTACA......................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGAACGTAAAGACACGAGCGG.............................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CGAGCGGAGCTACAACAACAACTCAG..........................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................TAAAGACACGAGCGGAGCTACAAC....................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AACGTAAAGACACGAGCGGAGCTACAAC....................................................................................................................................................................................2830.3310000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCTACAACAACAACTCAGA.........................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCTACAACAACAACTCAGAG........................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GCGGAGCTACAACAACAACTCAG..........................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ACGAACGTAAAGACACGAGCGGAGC..........................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAGACACGAGCGGAGCTACAACAACAAC..............................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TACAACAACAACTCAGAGCCCACT..................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ACACGAGCGGAGCTACAACAA..................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................CACGAGCGGAGCTACAACAACAACTC............................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TAAAGACACGAGCGGAGAA.........................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TATCATTGGTCGCGGCACATACATCGCAAATCGACCCCAGACTTCAGCATTTGGTTTTCACAACGAATGTAAAGACACGAGCGGAGCTATAACAACAACTCAGAGCCCACTCGTTCGTCAGA---------A-ATGCCGAATTC-GCTGGAATAGAGCAAGGTCCCGAAAAGAAGAGGCACAAAATGCAAACACCGATTAGATGCCATAGTTGTGGTAAACTCGGACACAAGGCAATGGAGTGCCGAG------AGAGGCTAGCAGAAGA--ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................TCGTCAGA---------A-ATGCCGAATTC-GCTGGA..........................................................................................................................26352.671580000003150050000000
..................................................................................................................TCGTCAGA---------A-ATGCCGAATTC-GCTGG...........................................................................................................................25325.0075000000165180000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAA.....................................25622.671360000002901401173000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTGCC............................23612.50750061003815509010000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCA......................................2469.1755000000010020511000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGA...............................................2458.2041000000136040000000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTGC.............................2266.0036000000255600000000
.................................................................................................................................................................................................................GTTGTGGTAAACTCGGACACAAGGCA......................................2655.2026000000000000251000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGACAC............................................2755.2026000200040010172000
..................................................................................................................................................................................................................TTGTGGTAAACTCGGACACAAGGCAA.....................................2665.1731000000000000310000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAATGGAG................................2844.751900000055020070000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGACACA...........................................2854.602300100034202092000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGG................................................2354.4022000000017050000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAAT....................................2654.2021000000100010190000
.................................................................................................................................................................................................................GTTGTGGTAAACTCGGACACAAGGCAA.....................................2753.8019000000100010170000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGAC..............................................2553.6018000000011040030000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGACA.............................................2653.2016000100030000111000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGGAG................................2543.0012000000100010100000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAATGGA.................................2742.5010000000000000100000
..................................................................................................................TCGTCAGA---------A-ATGCCGAATTC-GCTGGAA.........................................................................................................................2732.00600000006000000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGAGG...............................................................................................2652.001000000022060000000
.....................................................................................................................................................................................................................................AAGGCAATGGAGTGCCGAG------AGAGGC.............2512.00200000002000000000
...............................................................CGAATGTAAAGACACGAGCGG.............................................................................................................................................................................................2112.00200000000000002000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTGCCG...........................2461.671000000042001030000
...................................................................................................TCAGAGCCCACTCGTTCGTCAGA---------A-A...........................................................................................................................................2561.671000000014320000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGA.................................................................................................2451.60800000014120000000
...............................................................................................................................................................................................................TAGTTGTGGTAAACTCGGACACAAGGC.......................................2751.60800000010002050000
.......................................................................................................................................................ATAGAGCAAGGTCCCGAAAAGAAGA.................................................................................................2551.60800000017000000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGC.......................................2361.50900000000013050000
......................................................................................................................................................................................................................GGTAAACTCGGACACAAGGCAATGGAG................................2741.50600000011100030000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGGCAAT....................................2551.40700000000000061000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGGCAA.....................................2461.33800000000001070000
..................................................................................................................................................................................................................TTGTGGTAAACTCGGACACAAGGCA......................................2561.33800000000000080000
.........................................................................................................................................................................................TGCAAACACCGATTAGATGCCATAGT..............................................................2641.25500010000103000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAATGG..................................2841.25500000000000050000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAATGG..................................2641.25500000000000050000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCAT.................................................................2541.25500010000000040000
...................................................................................................................................................TGGAATAGAGCAAGGTCCCGAAAAGA....................................................................................................2651.20600000022110000000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGACAA............................................2751.20600000000000051000
...........................................................................................................................................................................................................GCCATAGTTGTGGTAAACTCGGACA.............................................2551.20600000004010010000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTGCCGT..........................2561.17700010001005000000
...................................................................TGTAAAGACACGAGCGGAGCTATAAC....................................................................................................................................................................................2611.00100000000000010000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGGAGTGC.............................2841.00400000010000030000
........................CGCAAATCGACCCCAGACTTCAGCATT..............................................................................................................................................................................................................................2731.00300000011000010000
...................................................................TGTAAAGACACGAGCGGAGCTATAA.....................................................................................................................................................................................2511.00100000000010000000
......................................................................................................................................................AATAGAGCAAGGTCCCGAAAAGAAGA.................................................................................................2651.00500000030101000000
.....TTGGTCGCGGCACATACATCGCAAATC.................................................................................................................................................................................................................................................2711.00100000000001000000
.......................................................................................TATAACAACAACTCAGAGCCC.....................................................................................................................................................................2111.00100100000000000000
......................................................................................................................CAGA---------A-ATGCCGAATTC-GCTGGAATAGAGC...................................................................................................................2911.00100000010000000000
...................................................................TGTAAAGACACGAGCGGAGCTATAACA...................................................................................................................................................................................2711.00100000000000010000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCA..................................................................2441.00400000000000040000
..........................................................CACAACGAATGTAAAGACACGAGCGG.............................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................................................GTTGTGGTAAACTCGGACACAAGGC.......................................2551.00500000000000050000
...........................................................................................................................................................................................................GCCATAGTTGTGGTAAACTCGGA...............................................2351.00500000004010000000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCC...................................................................2341.00400000000000040000
.......................................................TTTCACAACGAATGTAAAGACACGAGC...............................................................................................................................................................................................2711.00100100000000000000
..TCATTGGTCGCGGCACATACATCGC......................................................................................................................................................................................................................................................2511.00100000000000010000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTGCCGAG------...................2611.00100000010000000000
..............................................................................................................................................................................................................................................GAGTGCCGAG------AGAGGCTAGCAGAAG....2511.00100000000001000000
.................................................TTTGGTTTTCACAACGAATGTAAAGA......................................................................................................................................................................................................2611.00100000000100000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAAA....................................2660.83500000002000030000
................................................................................................AACTCAGAGCCCACTCGTTCGTCAGA---------..............................................................................................................................................2660.83500000003020000000
...........................................................................................................................................................................................................GCCATAGTTGTGGTAAACTCGGACACA...........................................2750.80400000003000010000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATG...................................2250.80400200000000011000
...................................................................................................................................................TGGAATAGAGCAAGGTCCCGAAAAGAAGA.................................................................................................2950.80400000013000000000
.............................................................................................................................................................................................AACACCGATTAGATGCCATAGTTGTGG.........................................................2740.75300000010002000000
......................................................................................................................................................................................................................GGTAAACTCGGACACAAGGCAATGGA.................................2640.75300000000000030000
..............................................................................................................................................................................................ACACCGATTAGATGCCATAGTTGTGG.........................................................2640.75300000002001000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGAGGC..............................................................................................2740.75300000012000000000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCA......................................2260.67400000000000040000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGG........................................2160.67400000000001003000
..................................................................................................................................................................................................................TTGTGGTAAACTCGGACACAAGGC.......................................2460.67400000000000040000
.............................................................................................................................................................................................................................TCGGACACAAGGCAATGGAGTGCCGA..........................2660.67400000000000040000
.......................TCGCAAATCGACCCCAGACTTCAGCATT..............................................................................................................................................................................................................................2830.67200000000000020000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAA.....................................2360.67400000000000040000
...............................................................................................................................................................................................................TAGTTGTGGTAAACTCGGACACAAGGCAA.....................................2950.60300000011000010000
...................................................................................................................................................TGGAATAGAGCAAGGTCCCGAAAAGAAG..................................................................................................2850.60300000000100020000
...............................................................................................................................................................................................................TAGTTGTGGTAAACTCGGACACAAGG........................................2650.60300000000001020000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAAT....................................2450.60300000000000030000
......................................................................................................................................................................................................................GGTAAACTCGGACACAAGGCAAT....................................2350.60300000000000030000
......................................................................................................................................................................................................TAGATGCCATAGTTGTGGTAAACTC..................................................2540.50200000000002000000
...................TACATCGCAAATCGACCCCAGACT......................................................................................................................................................................................................................................2420.50100000000001000000
..........................................................................................................................................................................................................................AACTCGGACACAAGGCAATGGAG................................2340.50200000000000020000
.............................................................................................................................................................................................AACACCGATTAGATGCCATAGTTGTGGTA.......................................................2940.50200000020000000000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGGAGAA..............................2740.50200000000000020000
............................................................................................................................................ATTC-GCTGGAATAGAGCAAGG...............................................................................................................2140.50200000000002000000
.........................................................................................................................................................................................TGCAAACACCGATTAGA.......................................................................1740.50200000000020000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGAGGCA.............................................................................................2840.50200000001010000000
...........................................................................................................................................AATTC-GCTGGAATAGAGCAA.................................................................................................................2040.50200000000002000000
...................................................................................................................................................................................................GATTAGATGCCATAGT..............................................................1660.50300000000003000000
.........................................CTTCAGCATTTGGTTTTCACAACGAA..............................................................................................................................................................................................................2620.50100000000010000000
......................ATCGCAAATCGACCCCAGACTTCAGC.................................................................................................................................................................................................................................2620.50100000000001000000
.............................................................................................................................................TTC-GCTGGAATAGAGCAAGGTCCCGA.........................................................................................................2640.50200000000020000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAT.....................................2560.50300000000000030000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGGA.................................2440.50200000001000010000
.........................................................................................................................................................................................................................AAACTCGGACACAAGGCAATGGAGTGC.............................2740.50200000001001000000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGGAGTG..............................2740.50200000000000020000
...............................................................................................................................................................AGGTCCCGAAAAGAAGAGGCACAAAA........................................................................................2670.43300000001002000000
.....................................................................................................................................................GAATAGAGCAAGGTCCCGAAAAGA....................................................................................................2450.40200000020000000000
.........................................................................................................................................................................................................................AAACTCGGACACAAGGCAATG...................................2150.40200100001000000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAATG...................................2750.40200000000000020000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGAA................................................................................................2550.40200000000000020000
................................................................................................................................................................................................................AGTTGTGGTAAACTCGGACACAAGGC.......................................2650.40200000000000020000
.............................ATCGACCCCAGACTTCAGCATTTGGT..........................................................................................................................................................................................................................2650.40200010001000000000
...........................................................................................ACAACAACTCAGAGCCCACTCGTTCGT...........................................................................................................................................................2760.33200000002000000000
.......................TCGCAAATCGACCCCAGACTTCAGCA................................................................................................................................................................................................................................2630.33100000000001000000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGT...............................2060.33200000001001000000
......................................................................................................................................................................................................................GGTAAACTCGGACACAAGGCAA.....................................2260.33200000000002000000
.............................................................................................AACAACTCAGAGCCCACTCGTTCGTCAGA---------..............................................................................................................................................2960.33200000002000000000
..................................................................................................................................................................................................................TTGTGGTAAACTCGGACACAAGG........................................2360.33200000000000020000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTG..............................2160.33200000020000000000
.......................................................................................................................................................................................................................GTAAACTCGGACACAAGGCAA.....................................2160.33200000000000011000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAA.....................................2060.33200000000000020000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAG................................1960.33200000010100000000
..........................CAAATCGACCCCAGACTTCAGCATT..............................................................................................................................................................................................................................2530.33100000010000000000
..............................................................................................................................................................................GAGGCACAAAATGCAAACACCGATTAGA.......................................................................2830.33100000000001000000
.....................................................................................................AGAGCCCACTCGTTCGTCAGA---------A-ATGCC.......................................................................................................................................2760.33200000000010010000
...................................................................................................TCAGAGCCCACTCGTTCGTCAGA---------..............................................................................................................................................2360.33200000000200000000
..............................................................................................................................................................................................................................CGGACACAAGGCAATGGAGTGCCGA..........................2560.33200000000001010000
................................................................................................................................................................................GGCACAAAATGCAAACACCGATTAGA.......................................................................2630.33100000001000000000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGG..................................2340.25100000000000010000
............................................................................................................................................................................................AAACACCGATTAGATGCCATAGTTGC...........................................................2640.25100000000001000000
..............................................................................................................................................................................................ACACCGATTAGATGCCATAGTTGTGT.........................................................2640.25100000000001000000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCATA................................................................2640.25100000000001000000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCATAGT..............................................................2840.25100010000000000000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGGCAATGGAG................................2940.25100000001000000000
......................................................................................................................................................................................................TAGATGCCATAGTTGTGGTAAACT...................................................2440.25100000000001000000
.............................................................................................................................................TTC-GCTGGAATAGAGCAA.................................................................................................................1840.25100000000001000000
..........................................................................................................................................................................................................................AACTCGGACACAAGGCAATGGAGTGCAA...........................2840.25100000000000010000
.........................................................................................................................................................................................................................AAACTCGGACACAAGGCAATGGAG................................2440.25100000000000010000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGGCAATGG..................................2740.25100000000000010000
.......................................................................................................................................................ATAGAGCAAGGTCCCGAAAAGAAGAGGC..............................................................................................2840.25100000001000000000
..............................................................................................................................................................................................ACACCGATTAGATGCCATAGTTG............................................................2340.25100010000000000000
.............................................................................................................................................TTC-GCTGGAATAGAGCAAGGTCCCGAAA.......................................................................................................2840.25100000010000000000
................................................................................................................................................................................................ACCGATTAGATGCCATAGTTGTGGTA.......................................................2640.25100000000010000000
....................................................................................................................................................................................CAAAATGCAAACACCGATTAGATGCCA..................................................................2740.25100000000001000000
.........................................................................................................................................................................................TGCAAACACCGATTAGAC......................................................................1840.25100000000001000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGAGGCAC............................................................................................2940.25100000001000000000
......................................................................................................................................................................................................................GGTAAACTCGGACACAAGGCAATGG..................................2540.25100000000000010000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCAA.................................................................2540.25100000000000010000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGC....................................................................2240.25100000000000010000
..........................................................................................................................................................................................................................AACTCGGACACAAGGCAATGGAGTGCA............................2740.25100000000000010000
...........................................................................................................................................AATTC-GCTGGAATAGAGC...................................................................................................................1840.25100000010000000000
........................................................................................................................................................................................................GATGCCATAGTTGTGGTAAACTCGGA...............................................2640.25100000000001000000
..............................................................................................................................................................................................ACACCGATTAGATGCCATAGTTGTA..........................................................2540.25100000000001000000
........................................................................................................................................................................................................................TAAACTCGGACACAAGGCAATGGAGAAG.............................2840.25100000000000010000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCATTT...............................................................2740.25100000000000010000
.........................................................................................................................................................................................TGCAAACACCGATTAGATGCCATAGTTG............................................................2840.25100000000001000000
...............................................................................................................................................C-GCTGGAATAGAGCAAGGTCCCGAAA.......................................................................................................2640.25100000000100000000
...............................................................................................................................................C-GCTGGAATAGAGCAAGGTCCCGAA........................................................................................................2540.25100000000010000000
.................................................................................................................................................GCTGGAATAGAGCAAGGTCCCGAAA.......................................................................................................2540.25100000000000010000
.......................................................................................................................................................................................AATGCAAACACCGATTAGATGCCATAG...............................................................2740.25100000000000010000
................................................................................................................................................................................................................AGTTGTGGTAAACTCGGACACAAGGCA......................................2750.20100000000000010000
.........................................................................................................................................................................................................................AAACTCGGACACAAGGCAAT....................................2050.20100000000001000000
.............................ATCGACCCCAGACTTCAGCATTTGGTT.........................................................................................................................................................................................................................2750.20100000000010000000
...............................................................................................................................................................................................................TAGTTGTGGTAAACTCGGACACAAGGCA......................................2850.20100000000000010000
...........................................................................................................................................................................................................GCCATAGTTGTGGTAAACTCGGAC..............................................2450.20100000000000001000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAATA...................................2550.20100000000000010000
.......................................................................................................................................................ATAGAGCAAGGTCCCGAAAAGAAGAGG...............................................................................................2750.20100000010000000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAG..................................................................................................2350.20100000000001000000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAATGT..................................2650.20100000000000010000
......................................................................................................................................................................................................................GGTAAACTCGGACACAAGGCAATG...................................2450.20100000000000010000
.............................................................................................................................................................................................................CATAGTTGTGGTAAACTCGGACAC............................................2450.20100000000001000000
.............................................................................................................................................................................................................CATAGTTGTGGTAAACTCGGACACAAG.........................................2750.20100000000001000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCAATA...................................2750.20100000000000010000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGACAT............................................2750.20100000001000000000
........................................................................................................................................................TAGAGCAAGGTCCCGAAAAGAAGAG................................................................................................2550.20100000000100000000
..........................................................................................................................................................................................................TGCCATAGTTGTGGTAAACTCGGACACAA..........................................2950.20100000000000010000
..............................TCGACCCCAGACTTCAGCATTTGGTT.........................................................................................................................................................................................................................2650.20100000010000000000
.........................................................................................................................................................................................TGCAAACACCGATTAGATGCCATAGTA.............................................................2750.20100000000000010000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGGCAATG...................................2650.20100000001000000000
.................................................................................................ACTCAGAGCCCACTCGTTCGTCAGA---------A-A...........................................................................................................................................2760.17100000000001000000
...................................................................................................TCAGAGCCCACTCGTTCGTCAGA---------A-ATGCA.......................................................................................................................................2960.17100000000000010000
.....................................................................................................................................................................................................................TGGTAAACTCGGACACAAGGCAT.....................................2360.17100000000000010000
................................................................................................AACTCAGAGCCCACTCGTTCGTCAGA---------A-AA..........................................................................................................................................2960.17100000000000010000
...................................................................................................TCAGAGCCCACTCGTTCGTCAGA---------A-AA..........................................................................................................................................2660.17100000001000000000
..........................................................................................AACAACAACTCAGAGCCCACTCGT...............................................................................................................................................................2460.17100000000010000000
.........................................................................................................................................................................................................................AAACTCGGACACAAGGCAAA....................................2060.17100000000000010000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGGCT......................................2460.17100000000000010000
....................................................................................................................................................................................................................GTGGTAAACTCGGACACAAGGCAAAA...................................2660.17100000000000010000
......................................................................................................GAGCCCACTCGTTCGTCAGA---------A-ATGCAA......................................................................................................................................2760.17100000000000010000
.................................................................................................ACTCAGAGCCCACTCGTTCGTCAG........................................................................................................................................................2460.17100000001000000000
...............................................................................................CAACTCAGAGCCCACTCGTTCGTCAGA---------A-............................................................................................................................................2860.17100000001000000000
.......................................................................................................................................................................................................................GTAAACTCGGACACAAGGCA......................................2060.17100000000000001000
................................................................................................AACTCAGAGCCCACTCGTTCGTCAGA---------A-A...........................................................................................................................................2860.17100000001000000000
..........................................................................................AACAACAACTCAGAGCCCACTCGTTCGT...........................................................................................................................................................2860.17100000001000000000
...............................................................................................CAACTCAGAGCCCACTCGTTCGTCAGA---------..............................................................................................................................................2760.17100000001000000000
.....................................................................................................AGAGCCCACTCGTTCGTCAGA---------A-ATGCA.......................................................................................................................................2760.17100000000000010000
..............................................................................................................................................................AAGGTCCCGAAAAGAAGAGGCACAAAA........................................................................................2760.17100000001000000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGACACAAGG........................................2260.17100000000000010000
................................................................................................AACTCAGAGCCCACTCGTTCGTCAG........................................................................................................................................................2560.17100000001000000000
..................................................................................................................................................................................................CGATTAGATGCCATAGT..............................................................1760.17100000000001000000
..................................................................................................................................................................TCCCGAAAAGAAGAGGCACAAAATGC.....................................................................................2660.17100000000001000000
.............................................................................................................................................................................................................................TCGGACACAAGGCAATGGAGTGCCG...........................2560.17100000000000010000
..........................................................................................AACAACAACTCAGAGCCCACTCGTT..............................................................................................................................................................2560.17100000000001000000
...................................................................................................TCAGAGCCCACTCGTTCGTCAGA---------A-............................................................................................................................................2460.17100000001000000000
..................................................................................................CTCAGAGCCCACTCGTTCGTCAGA---------A-A...........................................................................................................................................2660.17100000010000000000
...................................................................................................TCAGAGCCCACTCGTTCG............................................................................................................................................................1870.14100000000001000000
.............................................................................................AACAACTCAGAGCCCACTCGTTCGT...........................................................................................................................................................2570.14100000000001000000
..................................................................................................CTCAGAGCCCACTCGTT..............................................................................................................................................................1770.14100000000001000000
..........................................................................................................................................................................AGAAGAGGCACAAAATGCA....................................................................................1970.14100000000001000000
...................................................................................................................................................................CCCGAAAAGAAGAGGCACAAAAT.......................................................................................2370.14100000000001000000
............................................................................................................................................................GCAAGGTCCCGAAAAGAAGAGG...............................................................................................2270.14100000000001000000
...................................................................................................................................................................................................................TGTGGTAAACTCGGA...............................................1580.13100000000001000000
droSec2
TATCATTGGTCGCGGCACATACATCGCAAATCGACCCCAGACTTCAGCATTTGGTTTTCACAACGAACGTAAAGACACGATCGGAGCTATAACAACAACTCAGAGCCCACTCGTTCGTCAGA---------A-ATGCCGAATTC-GCTGGAATAGAGCAAGGTCCCGAAAAGAAGAGGCACAAAATGCAAAAACCGATTAGATGCCATAGTTGTGGTAAACTCGGACACAAGGCAATGGAGTGCCGAA------AGAGAAGAGCAGAAGA--ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................CAGACTTCAGCATTTGGTTTT.......................................................................................................................................................................................................................21120.0810001
..................................................................................................CTCAGAGCCCACTCGTTCGTC..........................................................................................................................................................21130.0811000
droYak3
TATCATTGGTCCTGGCACATTCATCGCAAATCGACCCCAGGCTTCAGCATTTGGTTTTCACAACGAACGTAAAGACACGTGCGGAGCTACAACAACAACTCAGAGCCCACTCGTTCGTCAGA---------A-ATGCCGAATTC-GCTGGGATTGAGCAAGGCCCCGAAAAGAAAAGGCACAAAATGCAAACACCGATTAGACGCCATAGTTGCGGTAAACACGGACACAAGGCAATGGAGAGCAGAA------AGAGAAGAGCAGAAGA--GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TAAT------------------------AATTAATTCCACACTCCAGCGTTTACAATTTACAACAAATATAAAGACACTAGCGGAGCTACAACAACAATTCAAGGCTCACACATTCATCAGA---------A--TGGCGAATTC-TGTGGAATTAATCAAGGCCCCGAAAAGAAGAGGCAGGAAATTCAAACACTG-CTGGATGCAATTGTCGCGGAAAA--------CAAGGCAATAGAGAGCCGAA------GGAGAAGAGCATAAGA--GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
TGTCTGATGTGCTCGCTCATACGTCTAAAATAGACAACAGATTGCAGCGCTTGA-----ATATTCAATATCAGAACACGTAGCGAATTGGAGCAGTAGTTACGAGCGTTTGCGTTTGGTAAACGGAGTGTAC-T----GATACG-GCAGATCGAGGTCATGGCACTGAACGAAAGAAGCAAAAATTGACATAGCATATACGGTGCCATTCTTGTGGCAAAGTTGGACACAAAATTGCAGAGTGCCGAG------ACAGGAGAGCTGGAGA--GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
TGTCTGATGTGCTCGCTCATACGTC........................................................................................................................................................................................................................................................2511.0010100000000
droPer2
TGTCTGATGTGCTCGCTCATACGTCTAAAATAGACAACAGATTGCAGCGCTTGATATTCACCACCAATATCAGAACACGTAGCGAATTGGAGCAGTAGTTACGAGCGTTTGCGTTTGGTAAACGGAGTGATCAGTA----TACG-GCAGATCAAGGTCATGGCACTGAACGAAAGAAGCAAAAATTGACATCGCATATACGGTGCCATTCTTGTAGCAAAGTTGGACACAAAATTGCAGAGTGCCGAA------ACAGGAGAGCTGGAGA--GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................TGCGTTTGGTAAACGGAGTGATCAGTA----.....................................................................................................................................2713.003030000
..................................................................................................................TTGGTAAACGGAGTGATCAGTA----TAT..................................................................................................................................2511.001000001
..................................................................................................................TTGGTAAACGGAGTGATCAGTA----TACG-................................................................................................................................2611.001010000
............................................................................................................................................TACG-GCAGATCAAGGTCATGGC..............................................................................................................2221.002020000
.....................................................................................................CGAGCGTTTGCGTTTGGTAAACGGAG..................................................................................................................................................2611.001010000
..........................................................................................................................................................................GAAAGAAGCAAAAATTGACATCGC...............................................................................2421.002020000
..........................................................................................................................................................................................................................................TGCAGAGTGCCGAA------ACAGGAGAGC.........2420.501000001
..........................................................................................................................................................................GAAAGAAGCAAAAATTGACATCG................................................................................2320.501010000
.................................................................................................................................................................................................................................................TGCCGAA------ACAGGAGAGCTGGAGA--.2320.501000001
...................................................................................................................TGGTAAACGGAGTGATCAGTA----TACG-................................................................................................................................2520.501010000
......................................................................................................................................................................................................................................AAATTGCAGAGTGCCGAA------ACAG...............2220.501010000
droWil2
TTTCCCTAGCTCTGGCCCACATGGCACAAATGGATGACAAATTGTCGCGCTTGGTTTTTACAAACAATATTAAAA------ATGAAATGCAACAACAACTACAAGCGCACACTTTTAAGAAGCGGAACCTAG-ATGACGACTCA-TCTACAA------CAGGCCCGGAGCGTAAAAAGCCTAAGTATCTCTCTCAAGTGAAATGCAACTATTGTGGAAAGTCTGGGCATAAATATGCTGAATGTCGTGCTCGGCAAAGGACACCAATTCA--ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................GCAACTATTGTGGAAAGTCTGGGC..............................................2480.13100100
droVir3
TCTCAGTTGTTTTGGCACATACATCGAAAATCGACAAAAGTCTGCAACGTATGTTATATACGACTAATATTAAAAGTCAAGACGAGATGCAACAGCATCTGAAGGCCTATGCTTATGGAAGGTCAAATGGAG-GTCTACAGCCA-AATATCCCAAT---GGAACCAGATCGCAAGAGATCGAAAACATATG---GCATTAAATGTCATCATTGTGGAAACCTCGGACACAAAATGGTCGAATGTCGCA------AGAGGAAGTATGAAGA--ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................TGCTTATGGAAGGTCAAATGGA..............................................................................................................................................2220183.75367500701418860846302540000001920181210312761423534113338694100070000000000000000000000760
.............................................................................................................TGCTTATGGAAGGTCAAATGGAG-............................................................................................................................................2320166.50333000100140109181100100000032500014031347542673421158905101858137000000000000000000000860
.................CATACATCGAAAATCGACAAAAGTCTGC....................................................................................................................................................................................................................................2820130.9526190098024331600100100000005000220072304169344144503132502400000000000000000001000190
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACA.............................................212095.701914690230776870810010000000166006060031502177244851590374000000000000000000001260
.............................................................................................................TGCTTATGGAAGGTCAAATGGAG-G...........................................................................................................................................242090.501810002204107350012410000009200613132530355145165605149551416648000000000000000000010670
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGAC..............................................202085.5017101352513761012010000201000001291263403217911995337771445060000000000000000001000160
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACAC............................................222075.201504012215030024010200000067103170101231782178678113036898000000000000000000000050
.................CATACATCGAAAATCGACAAAAGTCT......................................................................................................................................................................................................................................262066.001320004928278104202000000033103100454031880110423803123702159000000000001000000000130
.............................................................................................................TGCTTATGGAAGGTCAAATGG...............................................................................................................................................212065.651313002050621002101000000104001175145283951274420591041274000000000000000000000410
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACA...........................................232061.4512291143420418210000000000003800211131010238731224495161020582100000000000000000100020
.......................................................................................TGCAACAGCATCTGAAGGCCTATGC.................................................................................................................................................................252061.3012261000185020110000000000217100122038400440037011004000000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAATGGAG-GTC.........................................................................................................................................262052.50105000709693631604040000007200312153901751139425673265270530000000000000000000010370
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAA..........................................242042.0584145821137010010000000000800054797816371544304523304120000111112100010000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAGA...............................................................................................262040.258052064240502120130700000024001004539153386419751860397480100001000000000000003014
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAG................................................................................................252039.407881701611121124000373000000521008232531101335019812264123914351902010000000000000010042
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAGAT..............................................................................................272036.057210091525741274718241000000000040231961447017031660315198010000001002000002000220
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAAA........................................262030.0560100302700010000000100150007039362940131046013943700000000000000000000010
.......................................................................................TGCAACAGCATCTGAAGGCCTATG..................................................................................................................................................................242028.955790000045022160000000000094000000014029391420600000000000000000000000000010
.................CATACATCGAAAATCGACAAAAGTCTG.....................................................................................................................................................................................................................................272026.955390016101870000010000000300026241596246021380362162000000000000000000000052
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAA.........................................252025.205048050160000000000000090009111717104353920150081662500000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGG................................................182022.85457200011531011290001000000270000020402239104046000011400000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGA...............................................192022.4044830010018140552000000000300011100472645140017012112200000000000000000000020
.............................................................................................................TGCTTATGGAAGGTCAAATG................................................................................................................................................202020.9041800001182107000000000018001306378295716018110021800000000000000000000030
...................................................................................................................................................TATCCCAAT---GGAACCAGATCGCAAGAGA...............................................................................................282018.4536900000000040000000000100000011160022700000008000000000000000000000120
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAA...................................................................................................222011.602320080603001100100000015001124023732779110026011000000000000000000000020
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAG..................................................................................................232011.50230501904300100002000000200050081570033037047510500000000000000000000040
.........................................................ATACGACTAATATTAAAAGTCAAGACG.............................................................................................................................................................................................272011.25225000034000300000000004000241310551716850120500100000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGA.................................................................................................242011.0522120902110001025000000080020633501517591411450000000000000000000000073
.............................................................................................................TGCTTATGGAAGGTCAAATGGAG-GT..........................................................................................................................................252010.0520100002150200020300000022000087802024723001421000000000000000000100040
.............................................................................................................TGCTTATGGAAGGTCAAATGGAG-GTCT........................................................................................................................................272010.0020000001161004000100000000000306432823560312620100000000000000000000030
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAAAT.......................................272010.002001010040000000000000030002224521522800102500400000000000000000000000
.................CATACATCGAAAATCGACAAAAG.........................................................................................................................................................................................................................................23208.251652060013000100000000004000012429107710401306000000000000000000000010
.............................................................................................................TGCTTATGGAAGGTCAAAT.................................................................................................................................................19208.25165000010000140000000000190001001271115590700300500000000000000000000020
.................................................................................................TCTGAAGGCCTATGCTTATGGAAGGT......................................................................................................................................................26208.1016210000190100100000000000410000000170522022000001500000000000000000000000
.................CATACATCGAAAATCGACAAAAGTC.......................................................................................................................................................................................................................................25207.851570014027000000000000008002010537611481402410001000000000000000000030
......................................................................TAAAAGTCAAGACGAGATGCAACAGC.................................................................................................................................................................................26207.35147700241000000010000001000000000414290290000015000000000000000000000310
.......................................................................................TGCAACAGCATCTGAAGGCCTATGCT................................................................................................................................................................26207.201440000090000000000000021000000034109590100000100000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGC.....................................................................................................20206.901381010576000000000000090002134177183336000212000000000000000000000010
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCA....................................................................................................21206.85137001204390000000000000610605231227430002409600000000000000000000001
........................................................................................................................................TACAGCCA-AATATCCCAAT---GGAACCAGA.........................................................................................................28206.85137002001000000000000000000000065224500100000100000000000000000000000
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGAGGAAGTAT........26206.851370000050000000000000010000000040027500200000300000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAGATC.............................................................................................28206.801360040000004010000000000000249191604800211009500000000000000000000002
...................TACATCGAAAATCGACAAAAGTCTGC....................................................................................................................................................................................................................................26206.751350010040002000000000080000000441311430101100600000000000000000000000
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGTATGAAG....27206.451290000020000000000000000000010401522460000000300000000000000000000000
......................................................................................................................................................CCCAAT---GGAACCAGATCGCAAGAGA...............................................................................................25205.80116003010100400000000002800010003076260500000000000000000000000000031
.................CATACATCGAAAATCGACAAAAGT........................................................................................................................................................................................................................................24204.959900401300000000000000000312242209341201402400000000000000000000000
...................................................................................................................................................TATCCCAAT---GGAACCAGATCGCAAGAG................................................................................................27204.9098000001000000000000006000000025810390000000700000000000000000000020
.........................................................................................................................................ACAGCCA-AATATCCCAAT---GGAACCAGA.........................................................................................................27204.6593000001000000000000004000000020120430300000100000000000000000000000
......................................................................TAAAAGTCAAGACGAGATGCAAC....................................................................................................................................................................................23204.458920506000000002000000000000001200041000050000000000000000000000250
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAAATG......................................28204.3086106000010000000000000000014301222350000100000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAT..........................................24204.2585130100000000000000000100002211128391102010000000000000000000000000
.........................................................ATACGACTAATATTAAAAGTCAAGACGA............................................................................................................................................................................................28204.208400000000010000000000000003442878250000300100000000000000000000000
...................................................................................................................................................TATCCCAAT---GGAACCAGATCGCAAGA.................................................................................................26204.20840000010000000000000017000000022513240100000100000000000000000000000
......................................................................TAAAAGTCAAGACGAGATGCAACAG..................................................................................................................................................................................25203.8577009030000000000000006000000001050210000013000000000000000000000190
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGTATGA......25203.807600000501010000000000800000002600340000000000000000000000000000010
.......................................................................................TGCAACAGCATCTGAAGGCCTATGCTT...............................................................................................................................................................27203.8076000002000000000000006100000010515360100000000000000000000000000000
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGAGGAAGTATG.......27203.5070000001000000000000000000000024715220000000000000000000000000000010
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGAGGAAGTA.........25203.5070000004000000000000004000000023010290000000000000000000000000000000
........................................................................................................................................TACAGCCA-AATATCCCAAT---GGAACCAG..........................................................................................................27203.4569000000000100000000000000000018120280000000100000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACC.............................................21203.40684100000000000000000002001000061380000000300000000000000000000030
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACC...........................................23203.40685600010000000000000001000000010270000000000000000000000000000000
......................................................................................ATGCAACAGCATCTGAAGGCCTATGC.................................................................................................................................................................26203.406800100502000000000000200000001559290000000000000000000000000000000
......................................................................TAAAAGTCAAGACGAGATGCAACAGCA................................................................................................................................................................................27203.30661033120000000000000001000000070900300002100000000000000000000060
.................................................................................................................TATGGAAGGTCAAATGGAG-GTCTACA.....................................................................................................................................26203.30661000020000000000000011000000014511200100000100000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACAA............................................22203.2565220000000010000000000200000019010200000000000000000000000000000000
...................................................................................................................TGGAAGGTCAAATGGAG-GTCTACA.....................................................................................................................................24203.25650000060000000000000010000000020310140000000100000000000000000000010
.............................................................................CAAGACGAGATGCAACAGCAT...............................................................................................................................................................................21203.25650000130008000200000020000000643905000001600000000000000000000060
...........................................................................................................TATGCTTATGGAAGGTCAAATGGAG-............................................................................................................................................25203.2565000007000000000000008000000014641201000000400000000000000000000000
.................CATACATCGAAAATCGACAAAAGTCTT.....................................................................................................................................................................................................................................27203.256500401500000000000000000102400011292014100000000000000000000000000
...........................................................................................................TATGCTTATGGAAGGTCAAATGGAG-G...........................................................................................................................................26203.10620000070000000000000030000000945240100010300000000000000000000050
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGTATGAA.....26203.056100001400000000000000600000001960230000000100000000000000000000010
................................................................................................................TTATGGAAGGTCAAATGGAG-GTCTAC......................................................................................................................................26203.006000000700020000000000700000009611150200000100000000000000000000000
......................................................................TAAAAGTCAAGACGAGATGCAACAGCATC..............................................................................................................................................................................29202.955930300000000000000000000000007611180000000300000000000000000000080
..................ATACATCGAAAATCGACAAAAGTCTGC....................................................................................................................................................................................................................................27202.905800700000000000000000000000001160330000000100000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAATGGAG-T...........................................................................................................................................24202.855700000000030001000000500000101404240200101100000000000000000000000
.....................................................................................................................GAAGGTCAAATGGAG-GTCTAC......................................................................................................................................21202.755500010900010000010110000201101112090100000000000000000000000000040
.............................................................................................................................................................................................................................TCGGACACAAAATGGTCGAATGTCGC..........................26202.5551000004000000000000001000000000310240000000000000000000000000000000
..........................................................................................................................................................................................................TGTCATCATTGTGGAAACCTCGGACA.............................................26202.5551201000000000000000007000000013110160000000100000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAGAA..............................................................................................27202.55511000000000020000000020012124210160003008200010000000000000000012
.........................................................ATACGACTAATATTAAAAGTCAAG................................................................................................................................................................................................24202.555100000000000000000000000000301433252000000100000000000000000000000
........................................................................................................................................................................................................................................ATGGTCGAATGTCGCA------AGAGG..............21202.50500010014210500000000000000100006560300000100000000000000000000140
.................................................................................................TCTGAAGGCCTATGCTTATGGAAGG.......................................................................................................................................................25202.505000100130001300000000104000000002040600000400000000000000000000020
.......TGTTTTGGCACATACATCGAAAATCG................................................................................................................................................................................................................................................26202.404800000100000000000000100000001437190100000100000000000000000000010
......................................................................TAAAAGTCAAGACGAGATGCAACA...................................................................................................................................................................................24202.4048101602000000000000000000000005000012000010000000000000000000000110
...................................................................................................TGAAGGCCTATGCTTATGGAAGGTC.....................................................................................................................................................25202.254500000000040000000000800000001130501200010100000000000000000000000
....................................................................................................GAAGGCCTATGCTTATGGAAGGTCAAAT.................................................................................................................................................28202.254500000100000000000000000000001753190000000000000000000000000000000
.............................................................................................................................................................................AGAGATCGAAAACATATG---GCAT...........................................................................22202.2044110005010700000000004010000075560000000100000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAATGC...............................................................................................................................................21202.204400000200000000000000120001011436130000000100000000000000000000000
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGTAT........23202.20440000000001000000000080000010077190000000000000000000000000000010
.......................................................................................................................................................................................................................................AATGGTCGAATGTCGCA------AGAG...............21202.1543000016200100000000007010000088500000000400000000000000000000000
...................................................................................................TGAAGGCCTATGCTTATGGAA.........................................................................................................................................................21202.15430000050000000010000101010000108360000000700000000000000000000000
...........................................................................................................TATGCTTATGGAAGGTCAAATGG...............................................................................................................................................23202.1042000009000200000000004000000071240700000400000000000000000000020
......................................................................TAAAAGTCAAGACGAGATGCA......................................................................................................................................................................................21202.104200100000000000000001010100005310012000010000000000000000000000160
.......................................................................................TGCAACAGCATCTGAAGGCCT.....................................................................................................................................................................21202.10424300111100000000010006100000034010100000200000000000000000010020
............................................................................................................................................................................AAGAGATCGAAAACATATG---GCAT...........................................................................23202.00400000020005000000000012000000044440000000300000000000000000000020
.........................................................ATACGACTAATATTAAAAGTCAAGA...............................................................................................................................................................................................25202.004000000100000000000000000001201531170000000000000000000000000000000
.................................................................................................TCTGAAGGCCTATGCTTATGGAAGGTC.....................................................................................................................................................27202.004000000100107000000000010000000300130300000000000000000000000000020
...................................................................TATTAAAAGTCAAGACGAGATGCAACA...................................................................................................................................................................................27201.953900000000000000000000100000002004130000000100000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACAT............................................22201.95394000020001000100000000000000154900000000200000000000000000000010
.................................................................................................TCTGAAGGCCTATGCTTATGGAAG........................................................................................................................................................24201.90380000020504000000000050000000110230000000600000000000000000000000
......................................................................................................................................................................................................................................AAATGGTCGAATGTCGCA------AGA................21201.9038012002000000000000306110000094220000000100000000000000000000130
......................................................................TAAAAGTCAAGACGAGATGCAACAGCAT...............................................................................................................................................................................28201.903800400001030000000000000000001060130000100000000000000000000000000
.......................................................................................TGCAACAGCATCTGAAGGCCTATGCTC...............................................................................................................................................................27201.85370000050000000000000020000000803190000000000000000000000000000000
.................................................................................................................TATGGAAGGTCAAATGGAG-GTCTAC......................................................................................................................................25201.80360000070000000000000010000000000490500000100000000000000000000000
....................................................................................................................................................ATCCCAAT---GGAACCAGATCGCAAGAGA...............................................................................................27201.80360000010000000000000000000010515170200000100000000000000000000030
......TTGTTTTGGCACATACATCGAAAATCGA...............................................................................................................................................................................................................................................28201.803600000000000000000000000000000413190000000000000000000000000000000
......................................................................TAAAAGTCAAGACGAGATGCAA.....................................................................................................................................................................................22201.75350000000000000000000000000000100208000008000000000000000000000160
.......................................................................................TGCAACAGCATCTGAAGGCCTATGCTTA..............................................................................................................................................................28201.75350000030000000000000000000000334220000000000000000000000000000000
.............................ATCGACAAAAGTCTGCAACGTATG............................................................................................................................................................................................................................24201.653300000000020000000000100000101431000000100100000000000000000000000
.......TGTTTTGGCACATACATCGAAAATCGAC..............................................................................................................................................................................................................................................28201.603200000000000000000000000000001214140000000100000000000000000000000
.............................................................................................................................................................................AGAGATCGAAAACATATG---GCA............................................................................21201.6032000002000000000000001001100085380000000100000000000000000000020
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGTATG.......24201.6032000004000000000000006000000104880000000100000000000000000000000
.................................................................................................................................................................................................................ATTGTGGAAACCTCGGACA.............................................19201.60320210030101000000000000000010204150100000000000000000000000000100
.........................................................................................CAACAGCATCTGAAGGCCTATGCTTA..............................................................................................................................................................26201.60320000000000000000000050000000805100300000100000000000000000000000
.................................................................................................................................................................................................................ATTGTGGAAACCTCGGACACA...........................................21201.5531114001100000000001104000000053270000000000000000000000000000000
......................................................................................................................................................................................................TAAATGTCATCATTGTGGAAACCTCG.................................................26201.55310000000100000000000030000000133460100000000000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAA..................................................................................................................................................18201.55310000000006000000000000000000910141000000000000000000000000000000
........GTTTTGGCACATACATCGAAAATCGA...............................................................................................................................................................................................................................................26201.503000000100000000000000100000011113110000000000000000000000000000010
..................................................................................................................ATGGAAGGTCAAATGGAG-GTC.........................................................................................................................................21201.5030001008000000000000005000000035320000000000000000000000000000030
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGAGGA.............21201.5030003004000100000000000001010094130000000300000000000000000000000
.................................................................................................................................................AATATCCCAAT---GGAACCAGATCGC.....................................................................................................24201.4529001002000000000000008000000041380000001000000000000000000000010
...........................................................................................................................................................T---GGAACCAGATCGCAAGAGAT..............................................................................................21201.45290000010050500000000000010000030110000001000000000000000000000020
................................................................................................................................................................................................................CATTGTGGAAACCTCGGACAC............................................21201.4028101002000000001000101100000072470000000000000000000000000000000
......................................................................................................................................................CCCAAT---GGAACCAGATCGCAAGAGAT..............................................................................................26201.4028002003000700000000004000000060300000101100000000000000000000000
..........................................................................................AACAGCATCTGAAGGCCTATG..................................................................................................................................................................21201.4028001008130100000000101002001035000000000000000000000000000000010
......................................................................TAAAAGTCAAGACGAGATGC.......................................................................................................................................................................................20201.3527000002000000010000011000001011100900000800000000000000000000010
.....................................................................TTAAAAGTCAAGACGAGATGC.......................................................................................................................................................................................21201.3527001005000000000010001010000080140000000500000000000000000000000
...................................................................................................TGAAGGCCTATGCTTATGGAAGG.......................................................................................................................................................23201.3026000002050340000000002000000020050100000200000000000000000000000
........................................................................................GCAACAGCATCTGAAGGCCTA....................................................................................................................................................................21201.3026001016000000000110004201010005030000000000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGAA..............................................20201.2525000002000600000000000000000001580200100000000000000000000000000
...........................................................................................ACAGCATCTGAAGGCCTATG..................................................................................................................................................................20201.2525001002020400000100015011000040100000000200000000000000000000000
...........................................................................................ACAGCATCTGAAGGCCTATGC.................................................................................................................................................................21201.2525000011400000000000100020110050030400000200000000000000000000000
.....................................................................................................................................................................................................TTAAATGTCATCATTGTGGAAACCTC..................................................26201.2024000000000000000000002000000090380000000200000000000000000000000
..................................................................................................................................................................................TCGAAAACATATG---GCATTAAATGTC...................................................................25201.2024001000000000000000002000000092350200000000000000000000000000000
.......................................................................................TGCAACAGCATCTGAAGGCCTA....................................................................................................................................................................22201.2024000002000000000000005001100051440000000100000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAA................................................................................................25201.2024000010001001220000000000000101530000302000000000000000000000020
.............................ATCGACAAAAGTCTGCAACGTATGTTA.........................................................................................................................................................................................................................27201.2024000000000000000000002000000093280000000000000000000000000000000
..........TTTGGCACATACATCGAAAATCGACA.............................................................................................................................................................................................................................................26201.2024000001000000000000004000000091700200000000000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAATGGAT-............................................................................................................................................23201.20240000020006000000000000000000101300100000000000000000000000000010
........................................................................................................................................................................TCGCAAGAGATCGAAAACATATG---GCAT...........................................................................27201.20240020000001000000000000000000710130000000000000000000000000000000
...................................................................................................TGAAGGCCTATGCTTATGGAAGGT......................................................................................................................................................24201.2024000003000200000000005000000031000500000500000000000000000000000
..............................TCGACAAAAGTCTGCAACGTATGTTA.........................................................................................................................................................................................................................26201.20240000000000000000000000000000113190000000000000000000000000000000
............................................................................................................................................GCCA-AATATCCCAAT---GGAACCAGATCGC.....................................................................................................28201.20240000000000000000000000000000723120000000000000000000000000000000
...............................................................................................................................................A-AATATCCCAAT---GGAACCAGATCGC.....................................................................................................25201.1523000013000000000000006000000040160100000100000000000000000000000
...........................................................................................ACAGCATCTGAAGGCCTATGCTTATG............................................................................................................................................................26201.1523000000010200000000004000000040480000000000000000000000000000000
.....................................................................TTAAAAGTCAAGACGAGATGCAACAGC.................................................................................................................................................................................27201.1523000002000000000000000000000170470000001100000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAAAA.......................................27201.1022000000000010000000000000012130480001000100000000000000000000000
.............................................................................................................................................................................AGAGATCGAAAACATATG---GCATT..........................................................................23201.1022001000000300000002001010000043160000000000000000000000000000000
............TGGCACATACATCGAAAATCG................................................................................................................................................................................................................................................21201.1022000011200000000001000100111062010000001100000000000000000000020
........GTTTTGGCACATACATCGAAAATCGACA.............................................................................................................................................................................................................................................28201.10220020010000000000000000000000303120000000100000000000000000000000
..................................................................................................................................................................................................................TTGTGGAAACCTCGGACACAAAATGG.....................................26201.10220000020000000000000040000000024100000000000000000000000000000000
................................................................................................................TTATGGAAGGTCAAATGGAG-G...........................................................................................................................................21201.1022000002000000000000004000010090110100000300000000000000000000000
................................................................................................................TTATGGAAGGTCAAATGGAG-GTC.........................................................................................................................................23201.1022000001000000000000008000000041150100000000000000000000000000010
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACATT...........................................23201.1022101001000000000000000000100051471000000000000000000000000000000
......................................................................................................................................................................................................TAAATGTCATCATTGTGGAAACCTCGG................................................27201.10220000000000000000000010000000121160100000000000000000000000000000
.......................................................................................TGCAACAGCATCTGAAGGCC......................................................................................................................................................................20201.1022110008000000000000005001000050000100000000000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAATGGAC-............................................................................................................................................23201.0521000000010000000000002000000050050100000100000000000000000000060
.............................................................................................................................................................................................TG---GCATTAAATGTCATCATTGTGGAAAC.....................................................28201.0521000000000000000000000000000064290000000000000000000000000000000
..................................................................................................................ATGGAAGGTCAAATGGAG-GTCTACA.....................................................................................................................................25201.0521000002000000000000002000000062170000000100000000000000000000000
..............................................................................................................GCTTATGGAAGGTCAAATGGAG-............................................................................................................................................22201.0521001005000000100000001000001140050100000000000000000000000000010
.........................................................................................................................................................AAT---GGAACCAGATCGCAAGAG................................................................................................21201.0020002003010000000000002000000012020000000200000000000000000000050
.........................................................................................................................GTCAAATGGAG-GTCTACAGCCA-AATAT...........................................................................................................................27201.00200000010000000000000000000000510130000000000000000000000000000000
.................................................................................................................................................................................................................ATTGTGGAAACCTCGGACAC............................................20201.0020040000000100000000000000000031280000010000000000000000000000000
................................................................................................................................................................................................................CATTGTGGAAACCTCGGACACA...........................................22201.0020104000000000000000101000000003180100000000000000000000000000000
.........................................................................................................................................................................CGCAAGAGATCGAAAACATATG---GCAT...........................................................................26201.0020000000000000000000002000000075120200000100000000000000000000000
............................................................................................................................................................................AAGAGATCGAAAACATATG---GC.............................................................................21201.0020010002000200000000002000000011360000000200000000000000000000000
......................................................................................................................................................CCCAAT---GGAACCAGATCGCAAGAGATC.............................................................................................27201.0020001003000200000000002000000030330100000100000000000000000000010
...................................................................................................................................................................................................................TGTGGAAACCTCGGACACAAAATGG.....................................25200.9519002000000000000000003000000054500000000000000000000000000000000
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGAGGAAG...........23200.9519000000000200000000000000000053450000000000000000000000000000000
........................................................................................................................................................................................................................................ATGGTCGAATGTCGCA------AGAGGA.............22200.9519000004000900000000000000000001020000001100000000000000000000010
.....................................................................................................................................................................................................................TGGAAACCTCGGACACAAAATGGTCGAA................................28200.95190000000000000000000000000000423100000000000000000000000000000000
.............................ATCGACAAAAGTCTGCAACGTATGT...........................................................................................................................................................................................................................25200.9519000000010100000000000000000063070000100000000000000000000000000
.........................................................................................................................................................AAT---GGAACCAGATCGCAAGAGATC.............................................................................................24200.9519000003000000000000004000000031130100000000000000000000000000030
.........................................................................................CAACAGCATCTGAAGGCCTAT...................................................................................................................................................................21200.9519000001000000000001007000000062200000000000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGAT..............................................20200.9519300000000000000000000000000050550001000000000000000000000000000
......................................................................................ATGCAACAGCATCTGAAGGCC......................................................................................................................................................................21200.9519102003000000000000002111000030120000000100000000000000000000100
..................................................................................................................ATGGAAGGTCAAATGGAG-G...........................................................................................................................................19200.9519002004100000000000000000000030430000000200000000000000000000000
........................................................................................................................................TACAGCCA-AATATCCCAAT---GGAACCA...........................................................................................................26200.90180000000000000000000000000000510120000000000000000000000000000000
............TGGCACATACATCGAAAATCGACAAAAG.........................................................................................................................................................................................................................................28200.90180000000000000000000000000000100260000000000000000000000000000000
..............................TCGACAAAAGTCTGCAACGTATGTTATA.......................................................................................................................................................................................................................28200.9018000000000000000000000000000080280000000000000000000000000000000
............................................................................................................................................................................AAGAGATCGAAAACATATG---GCA............................................................................22200.9018000001000100000000000000001032430000000200000000000000000000010
.............................................................................................................................................................................................TG---GCATTAAATGTCATCATTGTGGAAACC....................................................29200.90180000000000000000000000000000110340000000000000000000000000000000
......................................................................................................................................................................................................TAAATGTCATCATTGTGGAAACCTC..................................................25200.9018001000000000000000003000000003280000000100000000000000000000000
..............................................................................................................................................................................................................ATCATTGTGGAAACCTCGGAC..............................................21200.9018110000000000000000004000010042210000000100000000000000000000010
.................CATACATCGAAAATCGACA.............................................................................................................................................................................................................................................19200.9018000001000000000000003000001010040300101300000000000000000000000
.........TTTTGGCACATACATCGAAAATCGACA.............................................................................................................................................................................................................................................27200.90180000000000000000000000000000420120000000000000000000000000000000
.........................................................................................CAACAGCATCTGAAGGCCTATGCTT...............................................................................................................................................................25200.9018000000000100000000005000000051150000000000000000000000000000000
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGT..........21200.9018000004000000000000101000000044020100000100000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCG......................................................................................................19200.8517000002300000000000000001101040030000002000000000000000000000000
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAGTA.........22200.8517000000000000000000002000000061050100000200000000000000000000000
.............................................................................CAAGACGAGATGCAACAGCATC..............................................................................................................................................................................22200.8517000003000100000000000000000020240200000300000000000000000000000
..TCAGTTGTTTTGGCACATACATCGAAAA...................................................................................................................................................................................................................................................28200.8517000000000000000000000000000062090000000000000000000000000000000
..................................CAAAAGTCTGCAACGTATGTTATATAC....................................................................................................................................................................................................................27200.8517000000000000000000000000000062540000000000000000000000000000000
............................................................................................................................................................................AAGAGATCGAAAACATATG---GCATT..........................................................................24200.8517000000000000000000001000000033360000000000000000000000000000010
..............................................................................................................GCTTATGGAAGGTCAAATGGAG-GTC.........................................................................................................................................25200.8517001000100000000000000000000062300100000200000000000000000000010
............................................................................................................................................................................................................................................TCGAATGTCGCA------AGAGGAAG...........20200.8517000007000100000000001000000040120000000100000000000000000000000
.......................................................................................................................................................................................................................................AATGGTCGAATGTCGCA------AGAGG..............22200.8517000004000600000000000000000121020000000100000000000000000000000
..........................................................................................................................................................AT---GGAACCAGATCGCAAGAGATC.............................................................................................23200.8517000010000000000000002000000031030400001000000000000000000000020
................................................................TAATATTAAAAGTCAAGACGAGATGC.......................................................................................................................................................................................26200.8517000000000000000000001000000030570000001000000000000000000000000
...........................................................................................................................................................T---GGAACCAGATCGCAAGAGATCGAA..........................................................................................25200.8517000000000000000000000000000064320000001100000000000000000000000
.........................................................ATACGACTAATATTAAAAGTCAAGAC..............................................................................................................................................................................................26200.80160000000000000000000000001020020110000000000000000000000000000000
......................................................................................................................................................................................................TAAATGTCATCATTGTGGAAACCTCGGA...............................................28200.8016101000010000000000000000000033420000000100000000000000000000000
.....................................................................................................AAGGCCTATGCTTATGGAAGG.......................................................................................................................................................21200.8016000003000000000000000013100012000000000100000000000000000000220
.......................................................................................................................................................................................................................................AATGGTCGAATGTCGCA------AGA................20200.8016000004030200000000000101001001000000000100000000000000000000110
........................................................................................GCAACAGCATCTGAAGGCCTATGC.................................................................................................................................................................24200.8016001001000000000000003000000031340000000000000000000000000000000
.............................................................................................................................................................................AGAGATCGAAAACATATG---GCATTA.........................................................................24200.8016000000000000000000000000000052530000000100000000000000000000000
................................................................TAATATTAAAAGTCAAGACGAGATG........................................................................................................................................................................................25200.8016000001000000000000000000000070060100000100000000000000000000000
...........................................................................................................TATGCTTATGGAAGGTCAAAT.................................................................................................................................................21200.8016000002000000000000003000001035110000000000000000000000000000000
...................................................................................................................................................TATCCCAAT---GGAACCAGATCG......................................................................................................21200.8016000010000000001000003010010042010000000000000000000000000000110
..........................................................................................................................................................AT---GGAACCAGATCGCAAGAGATCGA...........................................................................................25200.8016000000000000000000002000001011090000000200000000000000000000000
...................................................................................................................TGGAAGGTCAAATGGAG-GTCTAC......................................................................................................................................23200.8016000001000000000000004000000040420000000100000000000000000000000
....................................................................................................................GGAAGGTCAAATGGAG-GTCTAC......................................................................................................................................22200.7515000000000300000000000000001040250000000000000000000000000000000
..TCAGTTGTTTTGGCACATACATCGAAA....................................................................................................................................................................................................................................................27200.7515000000000000000000000000000051720000000000000000000000000000000
............................................................................................................................................................................................................TCATCATTGTGGAAACCTCGG................................................21200.7515001003000000000000001001000040020000000200000000000000000000010
...............................................................................................................................................................GGAACCAGATCGCAAGAGATC.............................................................................................21200.7515000002000100000010000110001014010000000000000000000000000000110
..........................................................................................................................TCAAATGGAG-GTCTACAGCCA-AATAT...........................................................................................................................26200.7515000001000000000000001000000052240000000000000000000000000000000
................................................................................................................TTATGGAAGGTCAAATGGAG-GTCTA.......................................................................................................................................25200.7515000002000000000000005000000021230000000000000000000000000000000
...............................................................................................................................TGGAG-GTCTACAGCCA-AATATCCCAA......................................................................................................................26200.7515000000000000000000000000000060450000000000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACT...........................................23200.7515000000100000000000001000000030071200000000000000000000000000000
.................................................TATGTTATATACGACTAATATTAAAAGT....................................................................................................................................................................................................28200.7515000000000000000000000000000042360000000000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAT.........................................25200.7515001000000000000000001000020020340001100000000000000000000000000
................................................................TAATATTAAAAGTCAAGACGA............................................................................................................................................................................................21200.7515000012000000000001000000010051100000000300000000000000000000000
............................................................................TCAAGACGAGATGCAACAGCAT...............................................................................................................................................................................22200.7515001000000000000000007000000030000100000200000000000000000000010
...................................................................................................................................................TATCCCAAT---GGAACCAGATCGCAAG..................................................................................................25200.7515000001000000000000004000000001450000000000000000000000000000000
.............GGCACATACATCGAAAATCGACAAAAG.........................................................................................................................................................................................................................................27200.7014000001000000000000000000000023160001000000000000000000000000000
........................................................................................................................................................................................................................................ATGGTCGAATGTCGCA------AGAGGAAGTA.........26200.7014000002020000000000005000000050000000000000000000000000000000000
.........................................................................................CAACAGCATCTGAAGGCCTATG..................................................................................................................................................................22200.7014000103010200000000002000000010020200000000000000000000000000000
.....................................................................................................................................................................................................................................................GCA------AGAGGAAGTATGAAGA--A20200.7014000000000200000000000000000004250100000000000000000000000000000
............................................................................................................................................................................................................TCATCATTGTGGAAACCTCGGA...............................................22200.7014901003000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAG..........................................24200.7014700010000000000000000000000010140000000000000000000000000000000
..........................AAAATCGACAAAAGTCTGCAACGT...............................................................................................................................................................................................................................24200.7014000000000000000000000000000082040000000000000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACACAAAT........................................26200.7014000000000000000000000000010111540000100000000000000000000000000
.................................................................................................................................................................................................................ATTGTGGAAACCTCGGACACAAAA........................................24200.7014000000000000000000001000000140151000100000000000000000000000000
.........................................................................................................................GTCAAATGGAG-GTCTACAGCCA-AATA............................................................................................................................26200.6513000000000000000000000000001160050000000000000000000000000000000
.....................................................................................................................................................TCCCAAT---GGAACCAGATCGCAAGAGATT.............................................................................................28200.6513000000000100000000000000140000030000020000000000000000000000020
............................................................................................................................................................................................................TCATCATTGTGGAAACCTCGGACACA...........................................26200.6513400000000000000000000000000001260000000000000000000000000000000
.........................................................................................................................................................................................................................AACCTCGGACACAAAATGGTCGAAT...............................25200.6513000001000000000000000000000033130200000000000000000000000000000
..............................................................................................................................................................................GAGATCGAAAACATATG---GCATTAAATG.....................................................................27200.6513000000000000000000000000000043150000000000000000000000000000000
............................................................................TCAAGACGAGATGCAACAGCATCT.............................................................................................................................................................................24200.6513000000000000000000000000000070240000000000000000000000000000000
.............................................................................................................................................................................................................CATCATTGTGGAAACCTCGGACACAAAA........................................28200.6513000001000000000000000000000021450000000000000000000000000000000
.................CATACATCGAAAATCGACAAAA..........................................................................................................................................................................................................................................22200.6513002001000000000000000000001011250000000000000000000000000000000
..........................................................................................................................................................AT---GGAACCAGATCGCAAGAGAT..............................................................................................22200.6513000000100600000000003000000011000000000000000000000000000000010
..................................................................................................................................................................................TCGAAAACATATG---GCATTAAATGTCA..................................................................26200.6513000000000000000000000000000090400000000000000000000000000000000
.................................................................................................................................................................................................................ATTGTGGAAACCTCGGACACAAAATGG.....................................27200.6513000000010000000000000000000062040000000000000000000000000000000
.............................................................................................................TGCTTATGGAAGGTCAAATGGAA-............................................................................................................................................23200.6012000000100100000000000000000000190000000000000000000000000000000
...........................................................................................................................................AGCCA-AATATCCCAAT---GGAACCAGA.........................................................................................................25200.6012000000000000000000000000000040340100000000000000000000000000000
.......TGTTTTGGCACATACATCGAAAATCGA...............................................................................................................................................................................................................................................27200.6012000000000000000000000000000021270000000000000000000000000000000
....................................................................................................................................................................................................ATTAAATGTCATCATTGTGGA........................................................21200.6012000012000000000000000000000042100000000200000000000000000000000
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACT.............................................21200.6012000000000300000000003000000000130000000110000000000000000000000
.............................................................................................................................................................................AGAGATCGAAAACATATG---GC.............................................................................20200.6012010001000300000000001000000001140000000000000000000000000000000
...................................................................TATTAAAAGTCAAGACGAGATGCAAC....................................................................................................................................................................................26200.6012000000000000000000000000000022250000000100000000000000000000000
................................................................................................................TTATGGAAGGTCAAATGGAG-GTCTACA.....................................................................................................................................27200.6012000000000000000000000000000031240000000200000000000000000000000
....................................................................................................................................................ATCCCAAT---GGAACCAGATCGCAAGAGAT..............................................................................................28200.6012000001000000000000000000000022230000000000000000000000000000020
..........................................................................................................................................................................................................TGTCATCATTGTGGAAACCTCGGACAC............................................27200.6012000000000000000000000000000030450000000000000000000000000000000
..............................................................................................................................................................................................................................CGGACACAAAATGGTCGAATGTC............................23200.6012000000000000000000002000000022040000000200000000000000000000000
.......................TCGAAAATCGACAAAAGTCTGCAACGTA..............................................................................................................................................................................................................................28200.6012000000000000000000000000000071300000000100000000000000000000000
...........................................................................................................................................................................................................................................GTCGAATGTCGCA------AGAGGAAGTATGA......26200.6012000002000000000000001000000023300000000000000000000000000000010
...............................................................................................................................TGGAG-GTCTACAGCCA-AATATCCCA.......................................................................................................................25200.6012000000000000000000000000000051240000000000000000000000000000000
..............................................................................................................GCTTATGGAAGGTCAAATGGA..............................................................................................................................................21200.6012000001000200000000001000000021050000000000000000000000000000000
..................................................................................................................................................................................................................TTGTGGAAACCTCGGACACAAAATGGT....................................27200.6012000002000000000000000000000052030000000000000000000000000000000
..........................................................................................................................................................AT---GGAACCAGATCGCAAGAGA...............................................................................................21200.6012100001000100000000003000000001040000000000000000000000000000010
................................................................................................ATCTGAAGGCCTATGCTTATGGAAGG.......................................................................................................................................................26200.6012000000010200000000002000000020140000000000000000000000000000000
............................................................................TCAAGACGAGATGCAACAGCATCTGA...........................................................................................................................................................................26200.6012000000000000000000000000000001380000000000000000000000000000000
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGA................18200.6012000000100200000000005000001110100000000000000000000000000000000
......................................................................................................................AAGGTCAAATGGAG-GTCTACAGCCA-AA..............................................................................................................................27200.6012000000000000000000000000000023240000000000000000000000000000010
.......................................................................................................................................................CCAAT---GGAACCAGATCGCAAG..................................................................................................21200.6012001002000000001000101002000002010000000100000000000000000000000
...........................................................................................................TATGCTTATGGAAGGTCAAATGGA..............................................................................................................................................24200.6012000000000000000000003000000050020000000000000000000000000000020
...............................................................................................................................................................................................................TCATTGTGGAAACCTCGGACAG............................................22200.5511000000000000000000000000000040140100100000000000000000000000000
..........................................................................................................................................................AT---GGAACCAGATCGCAAGAGATCGAA..........................................................................................26200.5511000000000000000000000000000102260000000000000000000000000000000
.............................................................................CAAGACGAGATGCAACAGCATCTGA...........................................................................................................................................................................25200.5511000000010000000000000000001121010000003100000000000000000000000
..................................CAAAAGTCTGCAACGTATGTT..........................................................................................................................................................................................................................21200.5511001000000000000100001000000121000100001200000000000000000000000
.........................................................................................................................................................................................................................AACCTCGGACACAAAATGGTCGAATGT.............................27200.5511000000020000000000000000000021130100000000000000000000000000010
.........................................................................................................................................................................................................................................TGGTCGAATGTCGCA------AGAGGAAGT..........24200.5511000000000000000000001000000031140100000000000000000000000000000
.........................................................ATACGACTAATATTAAAAGTCAAGACGT............................................................................................................................................................................................28200.5511000000000000000000000000000010180000000100000000000000000000000
droMoj3
TTGCTGTCGTGCTGACACATGCATCAAAATTTGACGCAAAATTACAAAAATTAATTTTTACAACAAATGTAAAAATGCGCAATGAAATGCAACAACAATTAAAAGCTTATGCATTTAAACGA---AGCGATC-ATC----TGCCGTCGGGTT------CAGAGCCAGAAAGGAAAAGACAAAAGATGCAAACTCCAAGCAAATGCTTTTACTGTGGGAAAACTGGACACAAGGTAGCCGAGTGCCGTA------AGAAGAAAGCAGACGA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................AAAAGATGCAAACTCCAAGCAAATGC....................................................................2624.008500030
...................................................................................................................................................................................AAAAGATGCAAACTCCAAGCAAATG.....................................................................2522.004400000
............................................................................................CAACAATTAAAAGCTTATGCATTT.............................................................................................................................................................2411.001100000
.......................................AATTACAAAAATTAATTTTTACAACA................................................................................................................................................................................................................2611.001100000
...................................................................TGTAAAAATGCGCAATGAAATGCAACA...................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................GAAAACTGGACACAAGGTAGC....................................2120.501000001
.................................................................................................................................................................................................................ACTGTGGGAAAACTGGACACAAGG........................................2420.501100000
...................................................................................................................................................................................AAAAGATGCAAACTCCAAGCAAATGCT...................................................................2720.501100000
.......................................................................................................AGCTTATGCATTTAAACGA---AGCG................................................................................................................................................2320.501100000
...................................................................................................................................................................................AAAAGATGCAAACTCCAAGCAAA.......................................................................2320.501000010
.......................................................................................................................................................................................GATGCAAACTCCAAGCAA........................................................................1820.501100000
...............................................................................................................................................................................................................TTACTGTGGGAAAACTGGACACAAGG........................................2620.501000010
.....................................................................................................................................................................................................................TGGGAAAACTGGACACAAGGTAGCCGAG................................2820.501100000
....................................................................................................................................................................................AAAGATGCAAACTCCAAGCAAATGC....................................................................2520.501100000

Generated: 05/18/2015 at 07:15 AM