ID:

dan_3340

 Coordinate:

scaffold_13417:5089215-5089365 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.8 -14.2 -14.0

Flybase annnotation

exon [dana_GLEANR_3006:8]; CDS [Dana\GF20511-cds]; intron [Dana\GF20511-in]

Repeatable elements

NameClassFamilyStrand
Hoana8DNAhAT-hobo+
mature
  1. scaffold_10513:134928-134948 +
  2. scaffold_12905:345228-345248 +
  3. scaffold_12947:511047-511067 +
  4. scaffold_13032:47573-47593 +
  5. scaffold_13034:633881-633901 +
  6. scaffold_13034:648912-648932 +
  7. scaffold_13034:741924-741944 +
  8. scaffold_13099:1133638-1133658 +
  9. scaffold_13099:1534723-1534743 +
  10. scaffold_13228:181142-181162 +
  11. scaffold_13228:844523-844543 +
  12. scaffold_13250:3347990-3348010 +
  13. scaffold_13266:19797419-19797439 +
  14. dan_2300  scaffold_13335:3212310-3212330 +
  15. scaffold_13337:22369729-22369749 +
  16. scaffold_13339:442320-442340 +
  17. scaffold_13339:1225751-1225771 +
  18. dan_3340  scaffold_13417:5089239-5089259 +
  19. scaffold_13499:841081-841101 +
  20. scaffold_13767:719719-719739 +
  21. scaffold_5678:496-516 -
  22. scaffold_9412:1159-1179 -
  23. scaffold_9492:339-359 -
  24. scaffold_9919:1487-1507 -
  25. scaffold_10213:7903-7923 -
  26. scaffold_10384:5619-5639 -
  27. scaffold_12586:50557-50577 -
  28. dan_437  scaffold_12911:4644331-4644351 -
  29. scaffold_12943:169677-169697 -
  30. scaffold_12984:427933-427953 -
  31. scaffold_13099:3258039-3258059 -
  32. scaffold_13239:99654-99674 -
  33. scaffold_13248:4294653-4294673 -
  34. scaffold_13248:4788172-4788192 -
  35. scaffold_13250:3101509-3101529 -
  36. scaffold_13250:3476486-3476506 -
  37. scaffold_13258:263876-263896 -
  38. scaffold_13333:195207-195227 -
  39. scaffold_13339:1242076-1242096 -
  40. scaffold_13718:579-599 -
  41. scaffold_176:1748-1768 +
  42. scaffold_287:1048-1068 +
  43. scaffold_2452:8979-8999 +
  44. scaffold_12905:75400-75420 +
  45. scaffold_12911:861422-861442 +
  46. scaffold_12926:244740-244760 +
  47. scaffold_12928:280593-280613 +
  48. scaffold_12948:302278-302298 +
  49. scaffold_13071:44373-44393 +
  50. scaffold_13077:93743-93763 +
  51. scaffold_13089:196022-196042 +
  52. scaffold_13099:364002-364022 +
  53. scaffold_13099:1953220-1953240 +
  54. scaffold_13230:1726760-1726780 +
  55. scaffold_13230:2378325-2378345 +
  56. scaffold_13258:1471590-1471610 +
  57. scaffold_13335:3156560-3156580 +
  58. scaffold_13337:22991929-22991949 +
  59. scaffold_13339:2163455-2163475 +
  60. scaffold_13417:5774016-5774036 +
  61. scaffold_138:71-91 +
  62. scaffold_9027:13-33 +
  63. scaffold_9246:5852-5872 +
  64. scaffold_12671:27886-27906 +
  65. scaffold_12911:235325-235345 +
  66. scaffold_12943:2055535-2055555 +
  67. scaffold_12943:2060687-2060707 +
  68. scaffold_12947:220810-220830 +
  69. scaffold_13077:314197-314217 +
  70. scaffold_13082:812514-812534 +
  71. scaffold_13099:253743-253763 +
  72. scaffold_13099:651164-651184 +
  73. scaffold_13099:1132474-1132494 +
  74. scaffold_13099:2649036-2649056 +
  75. scaffold_13230:425849-425869 +
  76. scaffold_13260:2020667-2020687 +
  77. scaffold_13337:22629092-22629112 +
  78. scaffold_13339:1210368-1210388 +
  79. scaffold_13417:2929515-2929535 +
  80. scaffold_13417:2934006-2934026 +
star
  1. scaffold_5677:521-543 +
  2. scaffold_12586:42576-42598 +
  3. scaffold_12586:179761-179783 +
  4. scaffold_12926:188815-188837 +
  5. scaffold_12947:511084-511106 +
  6. scaffold_12947:637611-637633 +
  7. scaffold_13034:2127390-2127412 +
  8. scaffold_13034:2130531-2130553 +
  9. scaffold_13063:37211-37233 +
  10. scaffold_13077:479924-479946 +
  11. scaffold_13082:2757374-2757396 +
  12. scaffold_13082:3637291-3637313 +
  13. scaffold_13137:277886-277908 +
  14. scaffold_13250:1580310-1580332 +
  15. scaffold_13258:1416800-1416822 +
  16. scaffold_13258:1418030-1418052 +
  17. scaffold_13280:635855-635877 +
  18. scaffold_13339:1715321-1715343 +
  19. scaffold_13417:2471836-2471858 +
  20. scaffold_13417:3321994-3322016 +
  21. scaffold_285:610-632 +
  22. scaffold_11141:3253-3275 +
  23. scaffold_12905:375494-375516 +
  24. scaffold_13117:5252319-5252341 +
  25. scaffold_13137:1286715-1286737 +
  26. scaffold_13250:1972040-1972062 +
  27. scaffold_13250:2410117-2410139 +
  28. scaffold_13260:2062675-2062697 +
  29. scaffold_13266:18824070-18824092 +
  30. scaffold_13266:19797456-19797478 +
  31. scaffold_13272:9115-9137 +
  32. scaffold_13280:48632-48654 +
  33. scaffold_13337:15854112-15854134 +
  34. scaffold_13337:22369766-22369788 +
  35. scaffold_13340:1311917-1311939 +
  36. scaffold_13417:2665782-2665804 +
  37. scaffold_13417:3452102-3452124 +
  38. dan_3340  scaffold_13417:5089276-5089298 +
  39. scaffold_13417:6715534-6715556 +
  40. scaffold_13767:719756-719778 +
  41. scaffold_3817:4286-4308 +
  42. scaffold_5270:1025-1047 +
  43. scaffold_5281:3508-3530 +
  44. scaffold_6770:3790-3812 +
  45. scaffold_8671:771-793 +
  46. scaffold_9267:1596-1618 +
  47. scaffold_10336:463-485 +
  48. scaffold_12586:161948-161970 +
  49. scaffold_12831:748-770 +
  50. scaffold_12966:161931-161953 +
  51. scaffold_13034:965244-965266 +
  52. scaffold_13082:2620994-2621016 +
  53. scaffold_13099:2139939-2139961 +
  54. scaffold_13248:401153-401175 +
  55. scaffold_13250:2873048-2873070 +
  56. scaffold_13260:1799376-1799398 +
  57. scaffold_13337:22874935-22874957 +
  58. scaffold_13339:927453-927475 +
  59. scaffold_13339:3603936-3603958 +
  60. scaffold_13499:1484375-1484397 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAATTCGATATGTCAAATTTCATAAGGATCGGCCGACTATATACGATCCGCTATATATCTAATAATATAAGATGCGTGGCGCCACCTAGCGGACTGCGACTGAACTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTTTTTTTAAGACCCACTGTGTTAATTTATACAATTTTTTTCAGGTGGATCTCGTCCCTATTGGTTTGTTTTAACATCGGAAAGTATTTCTTGG
**************************************************************************.((((.(((((((.((((............))))..))))...........))).)))).********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V106
head
 V055
head
 V039
embryo
..........................................................................CGTGGCGCCACCTAGCGGACT............................................................................................................................................................ 21 0 20 1.50 30 0 30 0 0 0 0
................................................................................................................................................................................................................................GTTTTAACGTCGGAAAGTATTTCC... 24 2 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................ATTGGTTTGTTTTAACATCGGAAA........... 24 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................ATTGGTTTGTTTTAACATCGGA............. 22 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................GGTGGATCTCGTCCCTATTGGT............................. 22 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TTTTAACATCGGAAAGTATTTCT... 23 0 1 1.00 1 0 1 0 0 0 0
......................................................................................TAGCGGACTGCGACTGAACTGCAAG............................................................................................................................................ 25 0 20 0.40 8 8 0 0 0 0 0
.............................................................................GGCGCCACCTAGCGGACTGCGACT...................................................................................................................................................... 24 0 20 0.35 7 0 0 0 7 0 0
............................................................AATAATATAAGATGCGTGGCG.......................................................................................................................................................................... 21 0 20 0.35 7 0 0 7 0 0 0
......................................................................GATGCGTGGCGCCACCTAGCGGACT............................................................................................................................................................ 25 0 20 0.25 5 5 0 0 0 0 0
...............................................................................................................GGTATATCAACTTCGGCTCCGCC..................................................................................................................... 23 0 20 0.25 5 5 0 0 0 0 0
.............................CGGCCGACTATATACGATCCG......................................................................................................................................................................................................... 21 0 20 0.20 4 0 4 0 0 0 0
.................................................................................................GACTGAACTGCAAGGGTAT....................................................................................................................................... 19 0 20 0.15 3 0 0 3 0 0 0
...........................................................................................................................................................GTTTTTTTTAATGACCCACT............................................................................ 20 2 8 0.13 1 0 1 0 0 0 0
............TCAAATTTCATAAGGATCGGC.......................................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 2 0 0
.........................................................................................................................................AGTTAGCTTTCCTTTCTTGTTTTTT......................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
..............................................................................................................GGGTATATCAACTTCGGCTCC........................................................................................................................ 21 0 20 0.10 2 0 2 0 0 0 0
...................................................................................................................................................................................................GTTCAGGAGGAACTCGTCCC.................................... 20 3 14 0.07 1 0 0 0 0 1 0
.................................................................................................GACTGAACTGCAAGGGTATATCAACTTC.............................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
..................................................................................CACCTAGCGGACTGCGACTGAAC.................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................TTATACAGTTTTATTCAGGC................................................ 20 3 20 0.05 1 0 0 0 0 0 1
................................................................................................................................................TTTCCTTTCTTGTTTTTTTTT...................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
......................................................................................TAGCGGACTGCGACTGAACTGCAAGG........................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
...........................ATCGGCCGACTATATACGATCCGCT....................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
........TATGTCAAATTTCATAAGGATCGGCC......................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................CTGCGACTGAACTGCAAGGG.......................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
...........GTCAAATTTCATAAGGATCGG........................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
.........ATGTCAAATTTCATAAGGATCGGCC......................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
........................AGGATCGGCCGACTATATACG.............................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
....................................................................AAGATGCGTGGCGCCACCTAGCGGA.............................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................CGAAGTTAGCTTTCCTTTC.................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
....................................................ATATATCTAATAATATAAGATGCGTGGC........................................................................................................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

ATTAAGCTATACAGTTTAAAGTATTCCTAGCCGGCTGATATATGCTAGGCGATATATAGATTATTATATTCTACGCACCGCGGTGGATCGCCTGACGCTGACTTGACGTTCCCATATAGTTGAAGCCGAGGCGGGCTTCAATCGAAAGGAAAGAACAAAAAAAAATTCTGGGTGACACAATTAAATATGTTAAAAAAAGTCCACCTAGAGCAGGGATAACCAAACAAAATTGTAGCCTTTCATAAAGAACC
*********************************************************************************************************************.((((.(((((((.((((............))))..))))...........))).)))).************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 M058
embryo
 M044
female body
 V055
head
 V106
head
..............................................................................CGCGGTGGATCGCCTGACGCTGACT.................................................................................................................................................... 25 0 20 0.20 4 4 0 0 0 0
................................................................................................................................................................................................................AGCAGGGAGAACCAAACCA........................ 19 2 6 0.17 1 0 1 0 0 0
.......................................................................................................................................................................................................GCCATCTAGGGCAGGGATA................................. 19 3 8 0.13 1 0 0 0 1 0
..............................................................................................................................................................................................CAAAAAAAGTCCACCTAAA.......................................... 19 2 10 0.10 1 0 1 0 0 0
......................................................................................ATCGCCTGACGCTGACTTGACGTTCC........................................................................................................................................... 26 0 20 0.10 2 0 0 2 0 0
...................................................................................................................................................................................................................AGGGCTAACCAAAGAAAA...................... 18 2 19 0.05 1 0 0 1 0 0
....................................................................................................................................GGGCTTCAATCGAAAGGAAAGAA................................................................................................ 23 0 20 0.05 1 0 0 1 0 0
..................................................................................GTGGATCGCCTGACGCTGACTTG.................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................AAAAAATAATCCTGGGGGAC........................................................................... 20 3 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................TTTCTGTGCGACACAATTA.................................................................... 19 3 20 0.05 1 1 0 0 0 0
............................CGCCGGCTGATATATGCTAGGCGATA..................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................GAAGCCGAGGCGGGCTTCAATCG........................................................................................................... 23 0 20 0.05 1 0 0 0 0 1
........................................................................................................................................................TAAGAAAAAAAAATTGTGGGTG............................................................................. 22 3 20 0.05 1 0 0 0 0 1
.......................................................................................TCGCCTGACGCTGACTTGACGTTCCC.......................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13417:5089165-5089415 + dan_3340 TAATT---CGATA-TG-T-CAAA---TTTC----------ATAAGGATCGGCCGACTATATACGAT--CCGCTA--TATAT-----------------------------------------------------------------------CTAATAATAT---A----AGATGCGTGGCG----CCACCTAGCG-----GA---------------------------CTG--CGACTGAACTGCAAGGGTATATCAACTTCGGCTCCGCCCG-AAGTTAGCTTTCCTTTCTTG--TTTTTTTTT--AAGACCCACT------------------------------------------------------------------------------------------------GTGTT-AATTTATACAAT-------TTTTTTCAGGTGGATCTCGTCCCTATTGGTTTGTTTTA----------------------------------------------------------------------------------------------------------------------ACATCGGAAAGTATTTCT-TG----G
droBip1 scf7180000396680:4268-4477 - TAAT----TGGTTTTA-TTATGA---TGTAATC-------ATAAGGATCGGCCAACTATATCCGATGTTTGCGATATAT----------------------------------------ATCC----------------------------------------------------------------------------------------------------------------GGTTTTAACTGCAAGGGTATATTAACTTCGGCTCCG-CCGGAAGTTAGCTTTCCTTTCTTG--TTTTTATA----AAATTTAATT------GATAATTATT-----------------------------------------------------------------------------AC-------------CTT-----------TTTTC--------------------------------------GAATTTTTT---------------------------------------------TTAAATT-----------------------------ATTAT------TTTTT----AAA-T-TGTAAATATTTTT-------T
droKik1 scf7180000302475:596690-596934 + TAAT----AAGTATAGGT-AAAA---TGTAAGG-----------------------------------------------------------------------------------AAACTCTGTTTTGTGAGTGTTTTCAGCATTTA-AATCT-ATAATAT---A-----------------------------------AA---------------------------CATCGAAACCAATCTGCAAGGGTATACAAACTTCGGCGT-G-CCG-AAGTTAGCTT-CCTTTCTTG--TTTTTTTTATA-AACT------------------------------TTCTACCTACCTAGTTT------------ATAATA------ATTTTGAATAATTTT-------------AT--------------------------------TTTATTTTTGCATCACCTTTAGCATTTTTTA----------------------------------------------------------------------------------------------------------------------ATATGTAAAAT-ATTTTTTCGGTGTA
droFic1 scf7180000453665:6858-7122 + TTGAGTTACAAAG------CAAA---TTTC----------ATTAAAATCGGACGACTATATCATATAGCTGTCA--TA---------------------------------T---GAACAAT--------------------------------------A-----TGGAAAATTAATAGAAAAATCGTCATAGCTTCGATGCTCTTTAGCTTTTATGTATTTTTTCGACATA--TTTAGTAACTGCAAGGGTATATAAGCTTCGGCTT-G-CCG-AAGCTAGCTT-CCTTTCTTG--TTATGGTTTAA--------TTT------AAAAC-GATT--------------------------------------------------------------------------------------------------------ATTCTTAGGG-----TACGTTACGACTGGT----ATTG-------------------------------------------------------------------GTT----------TA------------------------------------ACAT---AGTGACCTTCT-TA----A
droEle1 scf7180000490412:25491-25793 - ATTA----CGGTT------TAAA---TTTC----------ATCAAAATCGGACGACTATAGCATATAGCTCCCA--TA---------------------------------G---GAACAATCGTATAGCTGC--C-ATAGGAACTAT----CGAATA--------------ATTAAGCTGCAAAACATCATAGCTTCAATGTTTCT-----------------------------AAACAATATGCAAGGGTATATGAATTTCGGCTT-T-CCG-AAGTTTGCTT-TCTCTCTTT--TTTATATA----TATTTTATTT-----AGAAAATGTTC-----------------------------------------------------------------------------AT-------------TTTAT-------TTTTT-------------ATG------------------------------------------------------------------------------TTTAGTGTATAATTTTTCGATGTTGTTGTGGGAAGATTTAGTACAGCTTTA-AGCTTGTTTTTAATTTCGTTTTTTTG----T
droRho1 scf7180000760766:5974-6207 + CCAATACCT--AC------CCAA---TTTC----------ATAAGGATCGG----CTATATCCTATAGCTGCCA--TATAAC-----------------------------T---GAACGATTGAAAAT----------------------------------------------------------GTCATAACTT--------ACA----------------------------GAATATTCTGCAAGGGTATATCAACTTTGGCTT----------------T-CCTTTCTTG--TTATTTTCT--AATAA-TG----------------T---------------T---------------------------------------------------------------A-TTTTTAATTTTACTCTACACATT--TCTCTACAAATTGGCTTCTA---------------------------------------------------------------------------------------------------TCTAATGCAGGAAACAACTAA------TTTA------AGATTTGAACATATTTTT-TA----G
droBia1 scf7180000302519:156784-157020 + TTTT----TGACA-TA-T---TA---TCTT----------ATAATA-T----------------------------TG---------------------------------G---GAATATTCGTTTTTATAT--TTTTTAGAATTTTAAAT---ACAATTTAATA----AAATTAATAAT---------------------T---------------------------ATT--TTTTATAACTGCAAGGGTATACAAACTTCGGCTT-G-CCG-AAGTTAACTT-CCCTTCTCG--TTTTAAATCT--------TTTTGATCGTG------ATA-----------------ATTTGTTTATAAATT------------------CTTT-ATTTATTT-GGAACCCGTTAGG-----------------------------------------------------------GCACTT----------------------------------------------------------------------------------------------------------------------ATTTTTAAATGTATTTAT-TG----G
droTak1 scf7180000410749:351-601 - ATTT----CGATT------TTAA---TTTT----------ATCAAAATCGAACTACTATATCATATAGCTGCCA--TT---------------------------------G---AAACGAACGCATAA-----------------------TTAATGA-----------GAAATAATAGGAAAATTAACATAGGA-----TA---------------------------ATA--GGAATTATCTGCAAGGGTATAGAAGCTTCGGCTG-G-CCG-AAGCTAGCTT-CCTTTCTTG--TTTTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTCACAGTTTTTTTTTAAAGATTTTTTAAAGTTCAAAATGTTAAATTTTTTGATTTTTTTATATGTCG----------GCA-------------------------------------------------------GATGTT
droEug1 scf7180000409765:142061-142118 + TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGTGGATCGCGTCCCTATTGGTTTGTTTTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-TG----G
dm3 chrX:15791106-15791184 + GTAT----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAGGTGGATCGCGTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-TG----G
droSim2 2l:20806944-20807117 + TATATTTTTGATT------CGAA---TTTG----------ATCAAAATTGGACGACAATATCATAAAGCGAACA--TG---------------------------------G---GAATATTTGATTTT----------------------------------------------------------GTTTTTGATC--------ATAAATTGTTTCGTTTTTTTTC-ATAAA--TTAAATTTTTGCAAGGGTACATAAGCTTCGGCTT-G-CCG-AAGCTAGCTT-CCTTCCTTG--TTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_18:1306459-1306610 + TATATTTTTGATT------CGAA---TTTG----------ATCAAAATTGGACGACAATATCATAAAGCGAACA--TG---------------------------------G---GAATATTTGATTTT----------------------------------------------------------GTTTTTGATC--------ATA-----------------------AA--TTAAATTTTTGCAAGGGTACATAAGCTTCGGCTT-G-CCG-AAGCTAGCTT-CCTTCCTTG--TTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:21795842-21795958 + A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATATAAGCTTCGGCAT-G-CCA-AGTCTGGCTT-CTTTCCTTT--TTTTTTTA----A-ATTTGTTA------TGTAATTATC-----------------------------------------------------------------------------AC-------------ATGAC-------TTCCC----------------------------------------------------------------------------------------------TTAAATATGTATCTTTTCTATA-------------------------------------------------------GATTTG
droEre2 scaffold_4784:14066129-14066213 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATATAAGCTTCGGCTT-G-CCG-AATCTTCCTT-CCTTTCTTT--TCTTGTTTTCA--------------------------------------------------------------------------------------------------GTCAAG---------------------------------------------------------ACACACTG---------------------------------------------------------------------------------------------------------------------AA--CTTG---------GT-TA----T
dp5 Unknown_singleton_1072:10072-10135 - AATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCGCAGGCGGCTCGCGTCCTTACTGGTTTGTGCTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCATCTCC-TG----G
droPer2 scaffold_141:24385-24486 - TGTT----TATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------TCATGCCTAACCAATTG------------ATTAAG------CTTTTAATTT---------------------------------------------CTTTCGCAGGCGGCTCGCGTCCTTACTGGTTTGTGTTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCATCTCC-TG----G
droWil2 scf2_1100000014210:1000-1212 + TTTG----CAATATTAGT-CTTT---TTAGAGCAAACATTTTTCCACTGTGACGG-------------------------------------------------------------------------------------------------CTAATGATAA---G----GAA-----------------AGA--------GTTACC-----------------------------AAAATAGTTGCAAGGGTATACAAACTTTGACGCGG-TCG-AAGTAAGCCC-TGGCCCTCCAGTTTTAATTT--------AGTTT------TATATAAGTC-----------------------------------------------------------------------------A-----------------GT-------TTTCTTC--ATTATCCTTATCCCTGACAACTTATATTG---------------------------------------------------------------------------------------------------------------------AATATCTGATTACGTATTC-C-----T
droVir3 scaffold_12947:19507-19756 - CATTT---TGATT--A-TCAAGATATCTTG----------ACCAAACTCGGCATTT--------------ACTA--TCTTCCGATACTTCTTAGATAGGGGCAAAGCACTAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGGGTATTAGATCTTTGGCGT-G-CCG-AAGATAGCCCTTCTTTCTCG--TTTTTGTTTT-------------------CTCATTATCAGGCCATTCTCTACGCAC-----------AGTTGTATATAATATAAAATATTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGTTTGGTG----------GAA-------------------------------------------------------G----A
droMoj3 scaffold_6359:2218021-2218161 + TCAATTTTCGCTT------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTC-TATTTTGTTATTTTTTTTTT--TTTTTTTTG--AATAT-CG----------------T---------------TC----------------------------------------------------------------TGGTT-ATTCTATGCTATGTGTTGTCTGTTGCAGGTGGCTCTCGTCCCTATTGGTTTGTGTTG----------------------------------------------------------------------------------------------------------------------ACATCGGAGAGCATTTCG-TG----G
droGri2 scaffold_14623:29805-29976 - TGGA------------------------------------------------GCACTATATCAAATAGCTTTCA--TTTTTTTTTGTTTTTTGAAGTACAATAAAGTTTTTTGAAGTACAA-------------------------------------------TA----AAATTTATAGCTCAGTC--------------CA---------------------------CCTGGACTCTGGTCTGCAAGGGTATCTAATATTCGGCTT-A-CCC-AATATTG----CCGTTCTTG--TTTTGGTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTA----------------------------------------------------------------------------------------------------------------------CTATCC--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TAATT---CGATA-TG-T-CAAA---TTTC----------ATAAGGATCGGCCGACTATATACGAT--CCGCTA--TATAT-----------------------------------------------------------------------CTAATAATAT---A----AGATGCGTGGCG----CCACCTAGCG-----GA---------------------------CTG--CGACTGAACTGCAAGGGTATATCAACTTCGGCTCCGCCCG-AAGTTAGCTTTCCTTTCTTG--TTTTTTTTT--AAGACCCACT------------------------------------------------------------------------------------------------GTGTT-AATTTATACAAT-------TTTTTTCAGGTGGATCTCGTCCCTATTGGTTTGTTTTA----------------------------------------------------------------------------------------------------------------------ACATCGGAAAGTATTTCT-TG----GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................CGTGGCG----CCACCTAGCG-----GA---------------------------CT......................................................................................................................................................................................................................................................................................................................................................................................................21201.50303000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTTGTTTTA----------------------------------------------------------------------------------------------------------------------ACATCGGAAA................2411.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTTGTTTTA----------------------------------------------------------------------------------------------------------------------ACATCGGA..................2211.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATCTCGTCCCTATTGGT........................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTA----------------------------------------------------------------------------------------------------------------------ACATCGGAAAGTATTTCT-.......2311.001100000
...............................................................................................................................................................................................TAGCG-----GA---------------------------CTG--CGACTGAACTGCAAG....................................................................................................................................................................................................................................................................................................................................................................................25200.408080000
..................................................................................................................................................................................GGCG----CCACCTAGCG-----GA---------------------------CTG--CGACT..............................................................................................................................................................................................................................................................................................................................................................................................24200.357000007
..........................................................................................................................................................AATAATAT---A----AGATGCGTGGCG----....................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.357000070
...........................................................................................................................................................................GATGCGTGGCG----CCACCTAGCG-----GA---------------------------CT......................................................................................................................................................................................................................................................................................................................................................................................................25200.255050000
..........................................................................................................................................................................................................................................................GGTATATCAACTTCGGCTCCGCC.............................................................................................................................................................................................................................................................................................................................................................23200.255050000
................................................CGGCCGACTATATACGAT--CCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204400000
............................................................................................................................................................................................................................................GACTGAACTGCAAGGGTAT...............................................................................................................................................................................................................................................................................................................................................................................19200.153000030
.................T-CAAA---TTTC----------ATAAGGATCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
.....................................................................................................................................................................................................................................................................................AGTTAGCTTTCCTTTCTTG--TTTTTT..............................................................................................................................................................................................................................................................................................................................25200.102020000
.........................................................................................................................................................................................................................................................GGGTATATCAACTTCGGCTCC................................................................................................................................................................................................................................................................................................................................................................21200.102200000
............................................................................................................................................................................................................................................GACTGAACTGCAAGGGTATATCAACTTC......................................................................................................................................................................................................................................................................................................................................................................28200.051010000
...........................................................................................................................................................................................CACCTAGCG-----GA---------------------------CTG--CGACTGAAC..........................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
............................................................................................................................................................................................................................................................................................TTTCCTTTCTTG--TTTTTTTTT--.........................................................................................................................................................................................................................................................................................................................21200.051010000
...............................................................................................................................................................................................TAGCG-----GA---------------------------CTG--CGACTGAACTGCAAGG...................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
..............................................ATCGGCCGACTATATACGAT--CCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
...........TA-TG-T-CAAA---TTTC----------ATAAGGATCGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
......................................................................................................................................................................................................................................CTG--CGACTGAACTGCAAGGG..................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
...............G-T-CAAA---TTTC----------ATAAGGATCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
............A-TG-T-CAAA---TTTC----------ATAAGGATCGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
...........................................AGGATCGGCCGACTATATACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
.....................................................................................................................................................................A----AGATGCGTGGCG----CCACCTAGCG-----GA---------------------------........................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.................................................................................................................................................................................................................................................................................CG-AAGTTAGCTTTCCTTTC.........................................................................................................................................................................................................................................................................................................................................19200.051010000
.........................................................................A--TATAT-----------------------------------------------------------------------CTAATAATAT---A----AGATGCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000010
droBip1
TAAT----TGGTTTTA-TTATGA---TGTAATC-------ATAAGGATCGGCCAACTATATCCGATGTTTGCGATATAT----------------------------------------ATCC----------------------------------------------------------------------------------------------------------------GGTTTTAACTGCAAGGGTATATTAACTTCGGCTCCG-CCGGAAGTTAGCTTTCCTTTCTTG--TTTTTATA----AAATTTAATT------GATAATTATT-----------------------------------------------------------------------------AC-------------CTT-----------TTTTC--------------------------------------GAATTTTTT---------------------------------------------TTAAATT-----------------------------ATTAT------TTTTT----AAA-T-TGTAAATATTTTT-------TSizeHit CountTotal NormTotal
No Reads
droKik1
TAAT----AAGTATAGGT-AAAA---TGTAAGG-----------------------------------------------------------------------------------AAACTCTGTTTTGTGAGTGTTTTCAGCATTTA-AATCT-ATAATAT---A-----------------------------------AA---------------------------CATCGAAACCAATCTGCAAGGGTATACAAACTTCGGCGT-G-CCG-AAGTTAGCTT-CCTTTCTTG--TTTTTTTTATA-AACT------------------------------TTCTACCTACCTAGTTT------------ATAATA------ATTTTGAATAATTTT-------------AT--------------------------------TTTATTTTTGCATCACCTTTAGCATTTTTTA----------------------------------------------------------------------------------------------------------------------ATATGTAAAAT-ATTTTTTCGGTGTASizeHit CountTotal NormTotal
No Reads
droFic1
TTGAGTTACAAAG------CAAA---TTTC----------ATTAAAATCGGACGACTATATCATATAGCTGTCA--TA---------------------------------T---GAACAAT--------------------------------------A-----TGGAAAATTAATAGAAAAATCGTCATAGCTTCGATGCTCTTTAGCTTTTATGTATTTTTTCGACATA--TTTAGTAACTGCAAGGGTATATAAGCTTCGGCTT-G-CCG-AAGCTAGCTT-CCTTTCTTG--TTATGGTTTAA--------TTT------AAAAC-GATT--------------------------------------------------------------------------------------------------------ATTCTTAGGG-----TACGTTACGACTGGT----ATTG-------------------------------------------------------------------GTT----------TA------------------------------------ACAT---AGTGACCTTCT-TA----ASizeHit CountTotal NormTotal
No Reads
droEle1
ATTA----CGGTT------TAAA---TTTC----------ATCAAAATCGGACGACTATAGCATATAGCTCCCA--TA---------------------------------G---GAACAATCGTATAGCTGC--C-ATAGGAACTAT----CGAATA--------------ATTAAGCTGCAAAACATCATAGCTTCAATGTTTCT-----------------------------AAACAATATGCAAGGGTATATGAATTTCGGCTT-T-CCG-AAGTTTGCTT-TCTCTCTTT--TTTATATA----TATTTTATTT-----AGAAAATGTTC-----------------------------------------------------------------------------AT-------------TTTAT-------TTTTT-------------ATG------------------------------------------------------------------------------TTTAGTGTATAATTTTTCGATGTTGTTGTGGGAAGATTTAGTACAGCTTTA-AGCTTGTTTTTAATTTCGTTTTTTTG----TSizeHit CountTotal NormTotal
No Reads
droRho1
CCAATACCT--AC------CCAA---TTTC----------ATAAGGATCGG----CTATATCCTATAGCTGCCA--TATAAC-----------------------------T---GAACGATTGAAAAT----------------------------------------------------------GTCATAACTT--------ACA----------------------------GAATATTCTGCAAGGGTATATCAACTTTGGCTT----------------T-CCTTTCTTG--TTATTTTCT--AATAA-TG----------------T---------------T---------------------------------------------------------------A-TTTTTAATTTTACTCTACACATT--TCTCTACAAATTGGCTTCTA---------------------------------------------------------------------------------------------------TCTAATGCAGGAAACAACTAA------TTTA------AGATTTGAACATATTTTT-TA----GSizeHit CountTotal NormTotal
No Reads
droBia1
TTTT----TGACA-TA-T---TA---TCTT----------ATAATA-T----------------------------TG---------------------------------G---GAATATTCGTTTTTATAT--TTTTTAGAATTTTAAAT---ACAATTTAATA----AAATTAATAAT---------------------T---------------------------ATT--TTTTATAACTGCAAGGGTATACAAACTTCGGCTT-G-CCG-AAGTTAACTT-CCCTTCTCG--TTTTAAATCT--------TTTTGATCGTG------ATA-----------------ATTTGTTTATAAATT------------------CTTT-ATTTATTT-GGAACCCGTTAGG-----------------------------------------------------------GCACTT----------------------------------------------------------------------------------------------------------------------ATTTTTAAATGTATTTAT-TG----GSizeHit CountTotal NormTotal
No Reads
droTak1
ATTT----CGATT------TTAA---TTTT----------ATCAAAATCGAACTACTATATCATATAGCTGCCA--TT---------------------------------G---AAACGAACGCATAA-----------------------TTAATGA-----------GAAATAATAGGAAAATTAACATAGGA-----TA---------------------------ATA--GGAATTATCTGCAAGGGTATAGAAGCTTCGGCTG-G-CCG-AAGCTAGCTT-CCTTTCTTG--TTTTTTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTCACAGTTTTTTTTTAAAGATTTTTTAAAGTTCAAAATGTTAAATTTTTTGATTTTTTTATATGTCG----------GCA-------------------------------------------------------GATGTTSizeHit CountTotal NormTotal
No Reads
droEug1
TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGTGGATCGCGTCCCTATTGGTTTGTTTTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-TG----GSizeHit CountTotal NormTotal
No Reads
dm3
GTAT----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAGGTGGATCGCGTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-TG----GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCT..........2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGT..............2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCGCGTCCGTATTGGTTTGTGC..................................................................................................................................................2615.0050000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAG...............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAG.............................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-T......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCGTCCGTATTGGTTTGTGC..................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-.......2612.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTG................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCGCGTCCGTATTGGTTTGTG...................................................................................................................................................2511.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAT----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTT.................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCGAGAGTATCTCC-TG----.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAT----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATCGCGTCCGTATTGGTTTGT....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAT----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTG................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGA................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-TG----.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAG.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGT..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........TTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTG................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCGCGTCCGTATTGGTTTG.....................................................................................................................................................2311.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-TG----.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGTGGATCGCGTCCGTATTGGT........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------AC........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGCAGGTGGATCGCGTC.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAGGTGGATC......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...T----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAG.............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------AC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............TTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTGCAG.............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGCTG----------------------------------------------------------------------------------------------------------------------ACATCCGAGAGTATCTCC-.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGTGGATCGCGTCCGTA.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTCCGTATTGGTTTG.....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGAGAGTATCTCC-TG----G1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AT----TGATTTTC-GCATG----------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTC...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------AC........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTCCGTATTGGTTTGTGCT.................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTCCGTATTGGTTTGTGCTG----------------------------------------------------------------------------------------------------------------------A.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTCCGTATTGGTTTGTGC..................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TATATTTTTGATT------CGAA---TTTG----------ATCAAAATTGGACGACAATATCATAAAGCGAACA--TG---------------------------------G---GAATATTTGATTTT----------------------------------------------------------GTTTTTGATC--------ATAAATTGTTTCGTTTTTTTTC-ATAAA--TTAAATTTTTGCAAGGGTACATAAGCTTCGGCTT-G-CCG-AAGCTAGCTT-CCTTCCTTG--TTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................TGATTTT----------------------------------------------------------GTTTTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1622.50500000000005000000
.........................................................................................................................TTGATTTT----------------------------------------------------------GTTTTTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1721.50300000010002000000
................................................TGGACGACAATATCATAAAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
............................TG----------ATCAAAATTGGACGACAATATCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
...............................................TTGGACGACAATATCATAAAGCGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
....................................................................................................................AATATTTGATTTT----------------------------------------------------------GTT................................................................................................................................................................................................................................................................................................................................................................................................................................................16100.80800000000008000000
...................................................................................................................GAATATTTGATTTT----------------------------------------------------------GTT................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.67200000000002000000
.........................................................................................................................TTGATTTT----------------------------------------------------------GTTTTTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1630.33100000001000000000
....................................................................................................................AATATTTGATTTT----------------------------------------------------------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................15110.27300000000003000000
..........................................................................................................................TGATTTT----------------------------------------------------------GTTTTTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1550.20100000000001000000
.....................................................................................................................ATATTTGATTTT----------------------------------------------------------GTT................................................................................................................................................................................................................................................................................................................................................................................................................................................15140.07100000000001000000
.........................................................................................................................TTGATTTT----------------------------------------------------------GTTTTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................15190.05100000000001000000
droSec2
TATATTTTTGATT------CGAA---TTTG----------ATCAAAATTGGACGACAATATCATAAAGCGAACA--TG---------------------------------G---GAATATTTGATTTT----------------------------------------------------------GTTTTTGATC--------ATA-----------------------AA--TTAAATTTTTGCAAGGGTACATAAGCTTCGGCTT-G-CCG-AAGCTAGCTT-CCTTCCTTG--TTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATATAAGCTTCGGCAT-G-CCA-AGTCTGGCTT-CTTTCCTTT--TTTTTTTA----A-ATTTGTTA------TGTAATTATC-----------------------------------------------------------------------------AC-------------ATGAC-------TTCCC----------------------------------------------------------------------------------------------TTAAATATGTATCTTTTCTATA-------------------------------------------------------GATTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATATAAGCTTCGGCTT-G-CCG-AATCTTCCTT-CCTTTCTTT--TCTTGTTTTCA--------------------------------------------------------------------------------------------------GTCAAG---------------------------------------------------------ACACACTG---------------------------------------------------------------------------------------------------------------------AA--CTTG---------GT-TA----TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
AATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCGCAGGCGGCTCGCGTCCTTACTGGTTTGTGCTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCATCTCC-TG----GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCTTACTGGTTTGTGCTA----------------------------------------------------------------------------------------------------------------------ACATCT....................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCATCTCC-TG----G2911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTTTGTGCTA----------------------------------------------------------------------------------------------------------------------ACATCTGA..................2111.0010100000000
droPer2
TGTT----TATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------TCATGCCTAACCAATTG------------ATTAAG------CTTTTAATTT---------------------------------------------CTTTCGCAGGCGGCTCGCGTCCTTACTGGTTTGTGTTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCATCTCC-TG----GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCAT............1811.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTA----------------------------------------------------------------------------------------------------------------------ACATCTGAGAGCATC...........1911.001000010
droWil2
TTTG----CAATATTAGT-CTTT---TTAGAGCAAACATTTTTCCACTGTGACGG-------------------------------------------------------------------------------------------------CTAATGATAA---G----GAA-----------------AGA--------GTTACC-----------------------------AAAATAGTTGCAAGGGTATACAAACTTTGACGCGG-TCG-AAGTAAGCCC-TGGCCCTCCAGTTTTAATTT--------AGTTT------TATATAAGTC-----------------------------------------------------------------------------A-----------------GT-------TTTCTTC--ATTATCCTTATCCCTGACAACTTATATTG---------------------------------------------------------------------------------------------------------------------AATATCTGATTACGTATTC-C-----TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC--ATTATCCTTATCCCTGACAACTT......................................................................................................................................................26170.06101000
..............................................................................................................................................................................................................................................................TACAAACTTTGACGCGG-TCG-AAG.......................................................................................................................................................................................................................................................................................................................................................23200.05100010
................................................................................................................................................................................................................................................................CAAACTTTGACGCGG-TCG-AA........................................................................................................................................................................................................................................................................................................................................................20200.05101000
droVir3
CATTT---TGATT--A-TCAAGATATCTTG----------ACCAAACTCGGCATTT--------------ACTA--TCTTCCGATACTTCTTAGATAGGGGCAAAGCACTAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGGGTATTAGATCTTTGGCGT-G-CCG-AAGATAGCCCTTCTTTCTCG--TTTTTGTTTT-------------------CTCATTATCAGGCCATTCTCTACGCAC-----------AGTTGTATATAATATAAAATATTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGTTTGGTG----------GAA-------------------------------------------------------G----ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATT.....................................................................................241915.6329700308151784610250000000009145262030012271010711110000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTT....................................................................................251912.5823900409060502011000000000221184245420060181127212000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTA...................................................................................26194.89930000700010001000000000027161713110050144400000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTT...................................................................................26194.057700203000000001000000000059201000012084624000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTAT......................................................................................23191.5329001010501000100000000002236400010000200000000000000000000000000
.........................TCTTG----------ACCAAACTCGGCATTT--------------ACTA--TC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCGT-G-C.............................................................................................................................................................................................................................................................................................................................................................27200.70140000000000000000000000000000000140000000000000000000000000000000
.........................................................................................................................T--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGGGT.................................................................................................................................................................................................................................................................................................................................................................................26200.55110000000000000000000000001100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATC.....................................................................................24190.5310001000001000000000001000100040010000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTG.........................................................................................20190.479000000100000000000000000111100001010011000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTC....................................................................................25190.479002002000000000000000001001111000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTAA..................................................................................27190.428000010200000000000000000021000000020000000000000000000000000000
....................................................................................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCGT-G-..............................................................................................................................................................................................................................................................................................................................................................26200.408000000000000000000000000000030000400001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATT.....................................................................................23190.326001000102010000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGT........................................................................................21190.326000010000000000000000000210100001000000000000000000000000000000
.............................................................................................................TAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGT...........................................................................................................................................................................................................................................................................................................................................................................................25200.306000003000000000000000001000000002000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTT..................................................................................27190.265000020000000000000000000010010000000000100000000000000000000000
.............................................................................................................................................................................................................................................TTGGGTCTGCAAGGGTATTAGATCTT.......................................................................................................................................................................................................................................................................................................................................................................26200.255000000000000000000000000000320000000000000000000000000000000000
.....................................................................................................................GCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGG............................................................................................................................................................................................................................................................................................................................................................................................19200.255000000000000000000000000000000050000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTA..................................................................................27190.214000010000000000000000000001000000001001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTAA...................................................................................26190.214000010000000000000000000000000000021000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTA.......................................................................................22190.214000000000000000000000000201000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTAAA.....................................................................................24190.214001000000000000000000000100000001000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATA.....................................................................................24190.214001000000000100000000000100000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TT...........................................................................................18200.204000000000000000000000000011100000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTG.................................................................................28170.183000000000000000000000000011100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTG...................................................................................26190.163000000000000000000000000010100000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTT....................................................................................24190.163001000000000000000000000000000000010010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTA....................................................................................25190.163000000000000000000000000200100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTT..........................................................................................19190.163000000000000000000000000001100000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATAA....................................................................................25190.163000000000000000000000000001200000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATG.....................................................................................24190.163000000100000000000000000001000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAGATCTTTGGCGT-G-CCG-AAGA......................................................................................................................................................................................................................................................................................................................................................22200.153000000000000000000000000002010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GGGTATTAGATCTTTGGCGT-G-CCG-AAG.......................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000000000030000000000000000000000000000
...................................................................................................................................................................................................................................................................TCTTTGGCGT-G-CCG-AAGATAGCCCT...............................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000001020000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAGATCTTTGGCGT-G-CCG-AAGATA....................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000003000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTG.................................................................................26170.122000000000000000000001000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTG....................................................................................25190.112000010000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATAAA...................................................................................26190.112000000001000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTA...................................................................................24190.112000000000000000000000000001001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTGA..................................................................................27190.112000000000000000000000001010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTAAA..................................................................................27190.112000000000000000000000000001100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTT...................................................................................25190.112002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTT....................................................................................23190.112001000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATT.....................................................................................22190.112001000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATCC....................................................................................25190.112000000000000000000000000001000000000000000000000000000000000010
...................................................................................................................GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGT...........................................................................................................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000200000000000000000000000000000000
......................................................................................................................................................................TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAA.....................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000020000000000000000000000000000000000
.....................................................................................................CAAAGCACTAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--G..................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000000000100000000000000000000010
.......................................................................................................................................................................................................................................................AAGGGTATTAGATCTTTGGCGT-G-C.............................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000002000000000000000000000000000000000000000000
........................................................................................................................TT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAA.....................................................................................................................................................................................................................................................................................................................................................................................23200.102000000100000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................TATTAGATCTTTGGCGT-G-CCG-..........................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000020000000000000000000000000000000000000
........................................................................................TCTTAGATAGGGGCAAAGCACTAT---GAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000000001000000000000000001000000000000000000000000000000000000
........................................................................................TCTTAGATAGGGGCAAAGCACTAT---GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000020000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGT................................................................................26110.091000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGT................................................................................29110.091000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGTTTGGTC----------................................................................35110.091000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGTT...............................................................................26110.091000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGT................................................................................27110.091000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTTGTTT..............................................................................26110.091000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTTTTGTTTGGTG----------GAA-------------------------------------------------------G----A23160.061000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTTTTGTTTGGTG----------GAA-------------------------------------------------------G----.22170.061000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTAC..................................................................................27190.051000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTAT......................................................................................22190.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTAG..................................................................................27190.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTAG...................................................................................26190.051000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTC...................................................................................24190.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTA....................................................................................24190.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTT...................................................................................24190.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTAA......................................................................................23190.051000000000000000000000000000000000000000000000000000000000001000
.......................................................................................TTCTTAGATAGGGGCAAAGCACTAT---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................................................GCAAAGCACTAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--G..................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
...............A-TCAAGATATCTTG----------ACCAAACTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................G----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGG...................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................GCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................TAGATAGGGGCAAAGCACTAT---GAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCGT-................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GTATTAGATCTTTGGCGT-G-CC............................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................TGGGTCTGCAAGGGTATTAGATC.........................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATTAGATCTTTGGCGT-G-CCG-AAGATA....................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................GGTCTGCAAGGGTATTAGATCTTTGG....................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000001000000000000000000000000
...........................................................................................TAGATAGGGGCAAAGCACTAT---GAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................GCACTAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTG..............................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTCT.................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................T---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTTGGGTCTGCAAGGGTATTAGATC.........................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................T---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGG............................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGGG..................................................................................................................................................................................................................................................................................................................................................................................23200.051000000010000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TATTAGATCTTTGGCGT-G-CCG-AAGATA....................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................ACTAT---GAGCATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGG............................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TGGGTCTGCAAGGGTATTAGATCTTTG.....................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTAAT.................................................................................28200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTTAA.....................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GGGTATTAGATCTTTGGCGT-G-CC............................................................................................................................................................................................................................................................................................................................................................23200.051000001000000000000000000000000000000000000000000000000000000000
...........................................................................................TAGATAGGGGCAAAGCACTAT---GAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................ATT--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGGG..................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................TCTTAGATAGGGGCAAAGCACTAT---GAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................T--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGCAAGGGTA................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGGAATATT-------------GT------------------------------------------------------------------------------------------------------------------TTTGTATTTTAT.................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................TACTTCTTAGATAGGGGCAAAGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................T--------------------------------------A-----TG----------------------------------A---------------------------AAA--GGTTGGGTCTGC.......................................................................................................................................................................................................................................................................................................................................................................................20200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
TCAATTTTCGCTT------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTC-TATTTTGTTATTTTTTTTTT--TTTTTTTTG--AATAT-CG----------------T---------------TC----------------------------------------------------------------TGGTT-ATTCTATGCTATGTGTTGTCTGTTGCAGGTGGCTCTCGTCCCTATTGGTTTGTGTTG----------------------------------------------------------------------------------------------------------------------ACATCGGAGAGCATTTCG-TG----GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTGTTGTCTGTTGCAG.............................................................................................................................................................................2111.001000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTTGTGTTG----------------------------------------------------------------------------------------------------------------------ACATCGGA..................2211.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG----------------------------------------------------------------------------------------------------------------------ACATCGGAGAGCATTTCG-TG----.2411.001000001
droGri2
TGGA------------------------------------------------GCACTATATCAAATAGCTTTCA--TTTTTTTTTGTTTTTTGAAGTACAATAAAGTTTTTTGAAGTACAA-------------------------------------------TA----AAATTTATAGCTCAGTC--------------CA---------------------------CCTGGACTCTGGTCTGCAAGGGTATCTAATATTCGGCTT-A-CCC-AATATTG----CCGTTCTTG--TTTTGGTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTA----------------------------------------------------------------------------------------------------------------------CTATCC--------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:08 AM