ID:

dan_3335

 Coordinate:

scaffold_13417:3880004-3880154 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dana\GF20183-cds]; exon [dana_GLEANR_2576:2]; intron [Dana\GF20183-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTCGGATTTCCGGGGCTCACGCATTTTGGTGGTCATATAGATGCATGGAGGTAATTTATTTATCATTGGCTATATAACCCGTGTGTTAAAGTTGGAAATTTTACAGTAGAAGCTTTTCTTTAAAAGACTACATTGGTTTTCACGGTTACAAAATCTTGATTTTTATACCCTTGCAGAGGGTATTATAATTTTGGTCAAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATT
**************************************************...............(((((((...((((.(((((((......(((((................)))))......))).)))).)))).(((.((((....)))).))).....((((((((...))))))))........)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V055
head
 M044
female body
 V106
head
............................................................................................................................................................................................................GCAACGCAGTGAAGGAGACATCTCCGAC................... 28 0 20 2.85 57 57 0 0 0
.................................................................................................................................ACAATGGTTTTCACGGTT........................................................................................................ 18 1 1 1.00 1 0 1 0 0
...........GGGGCTCACGCATTTTGGT............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................ATTATAATTTTGGTCAAAAGTGTGC............................................. 25 0 20 0.60 12 12 0 0 0
...........................................................................AACCCGTGTGTTGACGTGGG............................................................................................................................................................ 20 3 2 0.50 1 0 1 0 0
...................................................................................................................................................................................................CAAAAGTGTGCAACGCAGTGAAGGA............................... 25 0 20 0.30 6 6 0 0 0
......................ATTTTGGTGGTCAAGTAGA.................................................................................................................................................................................................................. 19 2 4 0.25 1 1 0 0 0
....GATGTCCTGGGCTCACGC..................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0
..............................................................................................................................................................................................................AACGCAGTGAAGGAGACATCTC....................... 22 0 20 0.20 4 0 0 4 0
..................................................................................................................................................................................................TCAAAAGTGTGCAACGCAGTGAAGGA............................... 26 0 20 0.15 3 0 0 0 3
............................................................................................................................................................................................TTTTGGTCAAAAGTGTGCAACG......................................... 22 0 20 0.10 2 0 0 2 0

Anti-sense strand reads

AAGCCTAAAGGCCCCGAGTGCGTAAAACCACCAGTATATCTACGTACCTCCATTAAATAAATAGTAACCGATATATTGGGCACACAATTTCAACCTTTAAAATGTCATCTTCGAAAAGAAATTTTCTGATGTAACCAAAAGTGCCAATGTTTTAGAACTAAAAATATGGGAACGTCTCCCATAATATTAAAACCAGTTTTCACACGTTGCGTCACTTCCTCTGTAGAGGCTGGGATATTTCATATATATAA
**************************************************...............(((((((...((((.(((((((......(((((................)))))......))).)))).)))).(((.((((....)))).))).....((((((((...))))))))........)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body
.............................................................................................................................................................................................................................TGTAGAGGCTGGGATATTTCATATAT.... 26 0 20 1.20 24 24 0 0
.............CCGAGTCCGTACAACCACCA.......................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0
...................................................................................................AAATGCGATCTTCGAAAAGA.................................................................................................................................... 20 2 2 0.50 1 0 0 1
.................................................................................................TGAAATGCGATCTTCGAAAAGA.................................................................................................................................... 22 3 3 0.33 1 0 0 1
........................................................................................................................................................................................................CACACGTTGCGTCACTTCCT............................... 20 0 20 0.25 5 5 0 0
..................................................................................................GAAATGCGATCTTCGAAAAGA.................................................................................................................................... 21 3 5 0.20 1 0 0 1
..................................................................................................................................................................................................................GTCACTTCCTCTGTAGAGGCT.................... 21 0 20 0.20 4 0 0 4
..............................................................................................................................................................................TCTCCCATAATATTAAAACCAGTTT.................................................... 25 0 20 0.15 3 0 3 0
.......................AAAACCACCGGCATGTCTAC................................................................................................................................................................................................................ 20 3 7 0.14 1 0 1 0
.......................AAAACCACCATTCTATCTTCG............................................................................................................................................................................................................... 21 3 8 0.13 1 0 1 0
..................................................................................................................................................................................................................GTCACTTCCTCTGTAGAGGC..................... 20 0 20 0.10 2 2 0 0
..................................................................................................GAAATGCGATCTTCGAAAAG..................................................................................................................................... 20 3 17 0.06 1 0 0 1
...............................................................................................................................................................................................ACCAGTTTTCACACGTTGCGTCACTTCC................................ 28 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13417:3879954-3880204 - dan_3335 TTCGGATTTCCGG----------------G-----GCTCACGCATTTTGGTGG----------------TCATATAGATGCATGGA--GG------------------TA------ATTTAT------------TTATCATTG-------GCTATAT---------AACCCGTGTG----------------------------TTAAA--GTTG-------------GAAATT------------------------------------------------------------------------------------------TTACAG------TAGAAGC-TTTTC---------------TTTAAA---------------------------------AGACTA--CATTGGTT--------------------------------------------------------------------------------------------------------------------T-TCACGG------T--TACAAAA---TCT------------------------------------TGA--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATTTTGGTCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATA--TATATT
droBip1 scf7180000396736:7530-7779 + TTCTTTT---------CT--------CAAGA----GCTCGGGTGGATTGGAAGTT--TTCTTG-----------TAG-TAGT--GT--AA------------------TG------AGGTAT------------CTACA-GTC---TTAGGGTAAAG---------AGCCCAGGGG----------------------------GGAAA--G------------------------------------------------------------------------------------------------------------------ATTTTGTGAGTAGCAAT-TATTC---------------TATCGAGA---------A------------------------GTG--CAG--GTTTTT---TTATTGATTTTT-------------------------------G-------------------------------------------------------G------------------------------------CTCTAT------------------------------------A--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATATTGTCCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATA--TATATT
droKik1 scf7180000299287:7746-7951 + CATATAT---------ATTT-----------------------ATT--------------------------------------------------------------TAATTTGT------TTTTATTATTAT------T--------------------------------------------------------TT----------------TAAAATTAATTGT-----------------------------TAA---T-------TGAATTTAAAATGTTT------------------------------GAA-------------------AATATA-TTT---------------TTTAAA---------------------------------AGACTA--TAA-------------------------------------------------------------------------------------------------------------------------------------AGT--TACAATATTCACTAT------------------------------------T--TTTT---TATACCCTT------------GC----------AGGGTATTATAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAGGTATA--TATTTT
droFic1 scf7180000453830:106823-107081 + TTCGATT---------TTT----------------------------------------CCTATGGCAGCTATAT----------------GATAAGTTGTTTTTATGAA------ATTTGT------------TTTCAATTAATA----AC--GAC---------AACCCTTGAG----------------------------TTAAA---------------------CAATCGATATTCTAAAAATATTGCTCGTGGGATAAAAAATAAC--------GA---------------------------------------------------------------------------------------------CGTTATCA--------------------------------------------------------------------------------------------------------------------------------------ATTTATTT------CCATTA--A-----------------T---TCTAT------------------------------------A--TATGTTTTATACACCT------------GC--AGAGCAAAAGGGTATTTTAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATA--TATATT
droEle1 scf7180000490104:26750-26984 - ATACATT---------TTC------------------------------ATGG----------------TGATCCAGG--------------------------------------------ATTCAC------TTATAATTC-------GA-----------------------------------------------------------------AATATATTTAT-----------------------------GTATGTC-------AGAATTGTAAAT---------------------------------------------------------------------------------------------GTCAGTACGCTAAATTTTTAATCGGGTGTACG--ACAATGATAGTT---TAATTCTTTTTT-------------------------------G-------------------------------------------------------ACAACATA--------TCG--------------------ACAC------------------------------------T--TTTT---TATATCCTT------------GC--------AGAGGGTATTATAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATA--TATATT
droRho1 scf7180000761511:250-491 - TACAAGTTTTCGA----------------G-----GCATACTTATTTT-CCGT----------------TTATACAGGCCCATCAA-----------------------------------------------------------------------------------------------------------------------------------AACATTTTT-----------------------------------ATTACAAATAAAACTTGCAAAT------AAACGT------TGT-----------TAT------GCACTT------TAAATTC-CTTAC---------------TCGAA---------------------------------TAGCCAA-ACATCGATTTTATTATGTTTTTT---------------------------------------------------------------------------------------------------------------------------------TTT------------------------------------TAA--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATTTTGGTCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCTCCGACCATATAAAGTATA--TATATT
droBia1 scf7180000301495:762340-762570 - AATGGCTTTGCAA----------------G-----GTTAGCACAATTT-----------------------------------------------------------------------------------------------------------GATTAATGTAGAATATTTTC-A---------------------------GAAAA--TTTATCAAACGTATTT--------------------------------------------------------------------CCGGTTTGT-----------TTTGGAATTCTACGA------TGTA---------------CGCCTATTCTGACA--A---------A------------------------GTG--CAA--A---------------------------------------------------------------------------------------------------------------------------TCC--------------------GTA---------------------TTTA----CATAGAGCA--TTTT---TATACCCTT------------GC--------AGAGGGTATAATAATTTCAGTTA-------GAAGT-TTGCAACGCAGTAAAGAAGACGTTTCCGACCCCATAAAGTAAA--TATATT
droTak1 scf7180000415376:315544-315758 - TTTCGACTTTAGA----------------GAATTT----TGGTAAAC---AATTT--TAACTG-----------TAAATAATT--A--AA------------------TA------ATTTAT------------ATA-----------------------------------------------------------------------------------------------AT------------------------------------------------------------------------------------------TAATTATATAAATATCAAT-TA----------------------------------GAACGTATGATTTTAAATT-------------------------AAGATTTTTCTTT-------------------------------G-------------------------------------------------------GTGT--------------------------------------T------------------------------------A--TATT---TATACCCTT------------GC--------AGAGGGTATTATGATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACGTTTCCGACCCCATAAAGTATA--TATATT
droEug1 scf7180000409142:38094-38334 - CATAGCG---------ATT-AT------------------------------------------------CATCTAAATAGTTAAG--GA------------------TA------ACTTAT------------GTATA---------------------------TTCTT----------GCGTAT--AAATTTGAC--------GCA--ATTT-------------CGAATT---------------------------------------------------ATATAAATA----------------------------------------------------------------------------------------------------------------------------------------CATTTTT-------------------------------CCAACTTGTTTCATTTTTT------------------------------------------------T-ATA----------------------------------CAGCCATTCTCGAAAATCGTCAATAGTTCA--TTTT---TTTA--------------GTCGT--AGAGCAAAAGGGTATAATAGATTCGTTGA-------AAAGT-ATGTAACACGTAGAAGGAAGCGTTTCCGACCCTATGAAGTATA--TATATT
dm3 chr3R:27873859-27874056 - CATACCC---------ATACCT-------T-----GAAACAAT------------------------------------------------GA------------------------TTT-----------------------------------GT----TATTTGTCATTAAA-GTCGTGCATGC-----------------------------AAAA-----------------------------------------------------------------------------------------------------------------------AAACTA-TTC---------------TTGAAA---------------------------------AAGCTTTAAAATAGTTTTT---AAATTTAATTTT-------------------------------A-------------------------------------------------------G------------------------------------CACA--------------------------------------A--ATTT---AATTTAATT------------TA--------AGACGGCATTCTTGATTCATTAC-------AAACT-TTGTAACCCT-----AGAAGCGAGTCCGACCCTATAAGGTACA--TTTATT
droSim2 2r:21551840-21552030 + TGGAGGC---------CAC---------------------------------------------------------------------------------------------------TTAT------------GTATAACTC-------GTTATAT---------TTCTT----------GGATCT--TATTTCCTC--------GAC--TTTT----------------------------------------------------------------TCGAGTTT------------------------------AGAAATATTACTG------TTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCT------------------------------------T--TTTT---TAAAACCCG------GTACTCGT--AGAGTAAAAGGGTATACTAGATTCGTTGA-------AAGAT-ATATAACA--GAGAAGGAAGCGTTTTCGACCATATAAAGTATA--TATACT
droSec2 scaffold_70:18424-18624 - GGTGGTT---------AGC-------------------------------------------------------------------------------------------------------------------TTCTGACTT-------AC---------CAGATATCGTTGGC-G---------------------------TGAAA--GCTGCCAAGCTTTCTT--------------------------------------------------------------------CCGTTTGGGTCTTC-------------------------------------------------------CTGTAA------------------------------------GTA--CAATGACT-------------------------------------------------------------------------------------------------------------------------------------------TCCCTATTC------------------------------------G--TTTT---TATACCCGT-------TACCCGT--AAAGTAAAAGGGTATACTAGATTCATTGA-------AAAGT-ATGTAACAGTCAGAAGGAAGCGTTTCCGACCTTATAAAGTATA--TATATT
droYak3 chr2h:499546-499779 + TTATATA---------TTT----------------------------TATTTA----------------TAGTATATATACAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATA--------------------------------------------------------------------------------------------------------------T-------------------------------ACATCTTGTGTTATTTTTATAGTATAATGCAATATTTATACCTATTTTATTTATAAATAAT--------TTATTG------A--TACAATT---ATT------------------------------------TTA--TTTT---TTTACCCGT-------TACTCGT--AGAGTAATAGGGTATACTAGATTCGTTGA-------AAAGT-ATGTGACAAGCAGAAGGAAGCGTTTCCGACCATAAAAAGTATA--TATAGT
droEre2 scaffold_4929:21684130-21684340 + TGGTGTT---------TAT-------T---T-----------------------------ATAG--------------TGTAGTGA--AGTGA------------------------TTCAT------------TCCC--ATG------------TT---------AACCCGTGAGGCGG-------------------------CATA--G------------------------------TTAAAACACTTCCATTTTTGTTAAAAAGAAC--------AC---------------------------------------------------------------------------------------------GTCCGTAG--------------------------------------------------------------------------------------------------------------------------------------TTTTAATT------AAATTA--A--------------------------------------------------------------------T---TATACAAGT-------TACTCCT--AGAGTAAAAGGGTATACTAGATTCGTTGA-------AAAGT-AAGTAACAGGCAGAAGGAAACGTTA-------TATAAATTATA--TATATT
dp5 3:17624577-17624811 - CACTTTT---------TAT-TG------------------------------------------------CACCTATAAATTTGGGGGTT------------------TA------CTTTA-----------------------------------------------------G-CTCTAGCATGCATAAAATATGCTTAATATTAAGGCGTTT-------------GAATTA-------------------------------------------TTAGAAGTGT--GAAAG----------------------------------------------------------------------------------------------------------------------------------------CAGTTTT-------------------------------G-------------------------------------------------------AAACAAGA--------TCT--------------------GTATTCGTTCACAGC--------CCGGC----AATAGAGTT--TTGT---TATACCCG------------------------------ATACTAGATTTGTGGTGAAAATGGATGT-GTGTAACGTCCTGAAGGAATCGTTTCCGACCACATAAAGTAT---TATA-T
droPer2 scaffold_14:1346023-1346260 + TTTTTTA---------G-------GTCAAGT------------GAATGCAGAGATTTTTCCCA-----------------------------------------------------------------------------TTG-------AAGATTC---------CACCACTGAT----------------------------TTGGA--CTAA-------------GCTATT------------------------------------------------------------------------------------------CC------------------------ATA-------------------TACTAT------------------------------------------------GT------TTTCCTCGTTTATTTGAATT---------------------------------------------------------------------------------T-TCGCAG------A--CGTGAAT---TTT------------------------------------CCATCTTTT---TATACGCGA-------TACTTAAAATGGGTATTGGGGTATATTAGATTTGCTGTAAAAGTGGATGT-GTGTAACGTCCAGAAGGAATCGTTTCCGACCCTATAAAGTATA--TATATT
droWil2 scf2_1100000004884:155467-155705 - TTAGAGT---------ATT-CTTGGTCAAGT-------------------------------------------------------------------------------------------ATTCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTATGGACATACATATGTACATACATACA---------------------TACATA-------------------TGTGAT------------------------------------------------TG------TGTCTGCATTGATTTAAATTTTTAAATATTTTTTG-------------------------------------------------------TTGAAGTT--------TCTAAAAAAT--TAC----ATTTTTGT-----------------------G----AATAAATGC--TTGT---TATACCATT------------GC--------AGAGGGTGTTAAAAAAATGGTCA-------AATTTGTTGTAGCGCACAGAAGGAGACGTTTCCGACCCCGTAAAGAATG--TATATT
droVir3 scaffold_13050:1424489-1424678 - ATTTTGTTGTATGGCGAT---------------------ACCTATCTTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCTGT-------------------------------------------------------------------------------------------------------------------------------------GGT-----------TTAGGAATTCCCAAG------TAGAGTT-CTTC----------------CTACAA--------------------------------GAGCC--------------------------------------------------------------------------------------------------------------------------------------------------T----CTTCTCTGT------------------------------------G--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATTTTGTCGC-------GAAAT-GTGTAACGCATAGAAGGAGACATCTCCGACCCCATAAAGTATATATATATT
droMoj3 scaffold_6482:2668749-2669010 + CTTGTTG---------ACTTCTTGGTCAAGA-------------------------------------------------------------------------------------------ATTTGAGGGTGT------C--------------------------------------------------------TA----------------TAAGGGTGTTTAT-----------------------------AGA---------------------------------------TGGGGTCCTC--ATGTTTAGCTATTAT---------------------TTTATGTTTGATTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------TT--------TCT--------------------GTACTGAATGTCACT--------ATAGT----CGTGAAGTA--TTTT---TATACCCTGAACCCATTTTCAGT--GGGAAATCAGGGTATAATGGTTTTGTTGA-------AATGT-ATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATA--TATATT
droGri2 scaffold_15126:996025-996218 - TTATATA---------TGT-------G---TATAT----ATGTATGT---AATTC--TTCTGG-----------TGGCACGT----------------------------------------------------TTA-------------------------------------------------------------------AGAAA--TTCG-------------TCAACA------------------------------------------------------------------------------------------TCATGA------TAT--------------------------------------------------------------------------------------GAATATTTCTTT-------------------------------G-------------------------------------------------------GCA---------------G------AGATT----TATGCTTAC------------------------------------G--TTTT---TAGACCCCG------------AC--------AGAGGGTATTGTAATTTTGTTGT-------GGTGT-TTGTAACCCATTGAAGGAGACGTGTTCGACTCCATAAAGTATA--TATAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTCGGATTTCCGG----------------G-----GCTCACGCATTTTGGTGG----------------TCATATAGATGCATGGA--GG------------------TA------ATTTAT------------TTATCATTG-------GCTATAT---------AACCCGTGTG----------------------------TTAAA--GTTG-------------GAAATT------------------------------------------------------------------------------------------TTACAG------TAGAAGC-TTTTC---------------TTTAAA---------------------------------AGACTA--CATTGGTT--------------------------------------------------------------------------------------------------------------------T-TCACGG------T--TACAAAA---TCT------------------------------------TGA--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATTTTGGTCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATA--TATATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCAGTGAAGGAGACATCTCCGAC.....................28202.85570570000
...........GG----------------G-----GCTCACGCATTTTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAATTTTGGTCA-------AAAGT-GTGC...............................................25200.60120120000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------AAAGT-GTGCAACGCAGTGAAGGA.................................25200.306060000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGTGAAGGAGACATCTC.........................22200.204400000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-------AAAGT-GTGCAACGCAGTGAAGGA.................................26200.153000003
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTCA-------AAAGT-GTGCAACG...........................................22200.102200000
droBip1
TTCTTTT---------CT--------CAAGA----GCTCGGGTGGATTGGAAGTT--TTCTTG-----------TAG-TAGT--GT--AA------------------TG------AGGTAT------------CTACA-GTC---TTAGGGTAAAG---------AGCCCAGGGG----------------------------GGAAA--G------------------------------------------------------------------------------------------------------------------ATTTTGTGAGTAGCAAT-TATTC---------------TATCGAGA---------A------------------------GTG--CAG--GTTTTT---TTATTGATTTTT-------------------------------G-------------------------------------------------------G------------------------------------CTCTAT------------------------------------A--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATATTGTCCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATA--TATATTSizeHit CountTotal NormTotal
No Reads
droKik1
CATATAT---------ATTT-----------------------ATT--------------------------------------------------------------TAATTTGT------TTTTATTATTAT------T--------------------------------------------------------TT----------------TAAAATTAATTGT-----------------------------TAA---T-------TGAATTTAAAATGTTT------------------------------GAA-------------------AATATA-TTT---------------TTTAAA---------------------------------AGACTA--TAA-------------------------------------------------------------------------------------------------------------------------------------AGT--TACAATATTCACTAT------------------------------------T--TTTT---TATACCCTT------------GC----------AGGGTATTATAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAGGTATA--TATTTTSizeHit CountTotal NormTotal
No Reads
droFic1
TTCGATT---------TTT----------------------------------------CCTATGGCAGCTATAT----------------GATAAGTTGTTTTTATGAA------ATTTGT------------TTTCAATTAATA----AC--GAC---------AACCCTTGAG----------------------------TTAAA---------------------CAATCGATATTCTAAAAATATTGCTCGTGGGATAAAAAATAAC--------GA---------------------------------------------------------------------------------------------CGTTATCA--------------------------------------------------------------------------------------------------------------------------------------ATTTATTT------CCATTA--A-----------------T---TCTAT------------------------------------A--TATGTTTTATACACCT------------GC--AGAGCAAAAGGGTATTTTAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATA--TATATTSizeHit CountTotal NormTotal
No Reads
droEle1
ATACATT---------TTC------------------------------ATGG----------------TGATCCAGG--------------------------------------------ATTCAC------TTATAATTC-------GA-----------------------------------------------------------------AATATATTTAT-----------------------------GTATGTC-------AGAATTGTAAAT---------------------------------------------------------------------------------------------GTCAGTACGCTAAATTTTTAATCGGGTGTACG--ACAATGATAGTT---TAATTCTTTTTT-------------------------------G-------------------------------------------------------ACAACATA--------TCG--------------------ACAC------------------------------------T--TTTT---TATATCCTT------------GC--------AGAGGGTATTATAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATA--TATATTSizeHit CountTotal NormTotal
No Reads
droRho1
TACAAGTTTTCGA----------------G-----GCATACTTATTTT-CCGT----------------TTATACAGGCCCATCAA-----------------------------------------------------------------------------------------------------------------------------------AACATTTTT-----------------------------------ATTACAAATAAAACTTGCAAAT------AAACGT------TGT-----------TAT------GCACTT------TAAATTC-CTTAC---------------TCGAA---------------------------------TAGCCAA-ACATCGATTTTATTATGTTTTTT---------------------------------------------------------------------------------------------------------------------------------TTT------------------------------------TAA--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATTTTGGTCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCTCCGACCATATAAAGTATA--TATATTSizeHit CountTotal NormTotal
No Reads
droBia1
AATGGCTTTGCAA----------------G-----GTTAGCACAATTT-----------------------------------------------------------------------------------------------------------GATTAATGTAGAATATTTTC-A---------------------------GAAAA--TTTATCAAACGTATTT--------------------------------------------------------------------CCGGTTTGT-----------TTTGGAATTCTACGA------TGTA---------------CGCCTATTCTGACA--A---------A------------------------GTG--CAA--A---------------------------------------------------------------------------------------------------------------------------TCC--------------------GTA---------------------TTTA----CATAGAGCA--TTTT---TATACCCTT------------GC--------AGAGGGTATAATAATTTCAGTTA-------GAAGT-TTGCAACGCAGTAAAGAAGACGTTTCCGACCCCATAAAGTAAA--TATATTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTCGACTTTAGA----------------GAATTT----TGGTAAAC---AATTT--TAACTG-----------TAAATAATT--A--AA------------------TA------ATTTAT------------ATA-----------------------------------------------------------------------------------------------AT------------------------------------------------------------------------------------------TAATTATATAAATATCAAT-TA----------------------------------GAACGTATGATTTTAAATT-------------------------AAGATTTTTCTTT-------------------------------G-------------------------------------------------------GTGT--------------------------------------T------------------------------------A--TATT---TATACCCTT------------GC--------AGAGGGTATTATGATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACGTTTCCGACCCCATAAAGTATA--TATATTSizeHit CountTotal NormTotal
No Reads
droEug1
CATAGCG---------ATT-AT------------------------------------------------CATCTAAATAGTTAAG--GA------------------TA------ACTTAT------------GTATA---------------------------TTCTT----------GCGTAT--AAATTTGAC--------GCA--ATTT-------------CGAATT---------------------------------------------------ATATAAATA----------------------------------------------------------------------------------------------------------------------------------------CATTTTT-------------------------------CCAACTTGTTTCATTTTTT------------------------------------------------T-ATA----------------------------------CAGCCATTCTCGAAAATCGTCAATAGTTCA--TTTT---TTTA--------------GTCGT--AGAGCAAAAGGGTATAATAGATTCGTTGA-------AAAGT-ATGTAACACGTAGAAGGAAGCGTTTCCGACCCTATGAAGTATA--TATATTSizeHit CountTotal NormTotal
No Reads
dm3
CATACCC---------ATACCT-------T-----GAAACAAT------------------------------------------------GA------------------------TTT-----------------------------------GT----TATTTGTCATTAAA-GTCGTGCATGC-----------------------------AAAA-----------------------------------------------------------------------------------------------------------------------AAACTA-TTC---------------TTGAAA---------------------------------AAGCTTTAAAATAGTTTTT---AAATTTAATTTT-------------------------------A-------------------------------------------------------G------------------------------------CACA--------------------------------------A--ATTT---AATTTAATT------------TA--------AGACGGCATTCTTGATTCATTAC-------AAACT-TTGTAACCCT-----AGAAGCGAGTCCGACCCTATAAGGTACA--TTTATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACCCT-----AGAAGCGAGTCCGAC.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................AACTA-TTC---------------TTGAAA---------------------------------AAGCTTTAAAA.............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGAGGC---------CAC---------------------------------------------------------------------------------------------------TTAT------------GTATAACTC-------GTTATAT---------TTCTT----------GGATCT--TATTTCCTC--------GAC--TTTT----------------------------------------------------------------TCGAGTTT------------------------------AGAAATATTACTG------TTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCT------------------------------------T--TTTT---TAAAACCCG------GTACTCGT--AGAGTAAAAGGGTATACTAGATTCGTTGA-------AAGAT-ATATAACA--GAGAAGGAAGCGTTTTCGACCATATAAAGTATA--TATACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAGAT-ATATAACA--GAGA.....................................25123.0023000000521231000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTGA-------A........................................................262010.8521700000001830032002000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGGGTATACTAGATTCGTTGA-------A........................................................27201.05210000001110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAGAT-ATATAACA--GAGAAGGA.................................2811.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TAAAACCCG------GTACTCGT--AGAGTAAA.....................................................................................2711.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................TTACTG------TTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCT------------------------------------T--TTTT---TAAAACC...............................................................................................................2811.00100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAGAT-ATATAACA--GAG......................................2411.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAGAT-ATATAACA--GAGAAGGA.................................2911.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTATACTAGATTCGTTGA-------A........................................................24200.751500000008007000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAAGGGTATACTAGATTCGTTGA-------.........................................................27200.501000000055000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGACCATATAAAGTATA--TATA..2480.25200000010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTGA-------A........................................................25200.25500000000005000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGGGTATACTAGATTCGTTGA-------.........................................................26200.25500000032000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTATACTAGATTCGTTGA-------AAG......................................................23100.20200000002000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGT--AGAGTAAAAGGG.................................................................................18200.20400000000004000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGTTTTCGACCATATAAAGTATA--......2750.20100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTCGTTGA-------A........................................................17200.20400000000004000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTAAAAGGGTATACTAGATTC.....................................................................24200.20400000000004000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGT--AGAGTAAAAGGGTATACTAG.........................................................................24200.15300000000000030000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCGT--AGAGTAAAAGGG.................................................................................19200.15300000000012000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACCATATAAAGTATA--TATA..2390.11100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTTCGACCATATAAAGTA..........2390.11100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTTCGACCATATAAAGTATA--A.....26100.10100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCGT--AGAGTAAAAGGGTATA.............................................................................23200.10200000000000020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTAAAAGGGTATACTAGATTCGTT..................................................................27200.10200000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGT--AGAGTAAAA....................................................................................15200.10200000000002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATACTAGATTCGTT..................................................................17200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AGAGTAAAAGGGTATACTAGATTCG....................................................................26200.10200000000002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGT--AGAGTAAAAGGGTATACTAGA........................................................................25200.10200000000000020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCGT--AGAGTAAAAGGGTATACTAG.........................................................................27200.10200000000000020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--AGAGTAAAAGGGTATACTAGA........................................................................23200.10200000000002000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGACCATATAAAGTATA--......21110.09100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTTCGACCATATAAAGT...........22110.09100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTTCGACCATAT................17180.06100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTAAAAGGGTATACTAGA........................................................................21200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAAGGGTATACTAGATTCGTTG.................................................................26200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--AGAGTAAAAGGGTATACTAGATT......................................................................25200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTG.................................................................24200.05100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGT--AGAGTAAAAGGGTATACTAGATA......................................................................27200.05100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGGGTATACTAGATTCGTTG.................................................................25200.05100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTAAAAGGGTATACTAGATT......................................................................23200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AGAGTAAAAGGGTATACTAG.........................................................................21200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGT--AGAGTAAAAGGGTATACTAGATT......................................................................26200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTAAAAGGGTATACTAGATTCGTT..................................................................26200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTGA-------AA.......................................................23200.05100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGT--AGAGTAAAAGGGTATACTAGA........................................................................24200.05100000000001000000
droSec2
GGTGGTT---------AGC-------------------------------------------------------------------------------------------------------------------TTCTGACTT-------AC---------CAGATATCGTTGGC-G---------------------------TGAAA--GCTGCCAAGCTTTCTT--------------------------------------------------------------------CCGTTTGGGTCTTC-------------------------------------------------------CTGTAA------------------------------------GTA--CAATGACT-------------------------------------------------------------------------------------------------------------------------------------------TCCCTATTC------------------------------------G--TTTT---TATACCCGT-------TACCCGT--AAAGTAAAAGGGTATACTAGATTCATTGA-------AAAGT-ATGTAACAGTCAGAAGGAAGCGTTTCCGACCTTATAAAGTATA--TATATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTCATTGA-------AAAGT-...................................................2190.1110010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGATTCATTGA-------AAAGT-AT.................................................21120.0810100
droYak3
TTATATA---------TTT----------------------------TATTTA----------------TAGTATATATACAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATA--------------------------------------------------------------------------------------------------------------T-------------------------------ACATCTTGTGTTATTTTTATAGTATAATGCAATATTTATACCTATTTTATTTATAAATAAT--------TTATTG------A--TACAATT---ATT------------------------------------TTA--TTTT---TTTACCCGT-------TACTCGT--AGAGTAATAGGGTATACTAGATTCGTTGA-------AAAGT-ATGTGACAAGCAGAAGGAAGCGTTTCCGACCATAAAAAGTATA--TATAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAAGGAAGCGTTTCCGACCATA.................28200.45902700000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCGT--AGAGTAATAGGGT................................................................................20200.20400000040000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAAGGAAGCGTTTCCGACC....................25200.20401300000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAAGGAAGCGTTTCCGACCAT..................27200.15302100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGT--AGAGTAATAGGGTATACTAGA........................................................................25200.10201000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGGTATACTAGATTCGT...................................................................20200.05100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGAAGGAAGCGTTTCCGACCATA.................27200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAGGAAGCGTTTCCGACCAT..................25200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGATTCGTTGA-------AAAGT-ATGT...............................................23200.05100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAAGGAAGCGTTTCCGACG....................25200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGAAGGAAGCGTTTCCGACCA...................25200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAAGGAAGCGTTTCC........................21200.05100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAGGAAGCGTTTCC........................19200.05100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGAAGGAAGCGTTTCCGACCAT..................26200.05101000000000
droEre2
TGGTGTT---------TAT-------T---T-----------------------------ATAG--------------TGTAGTGA--AGTGA------------------------TTCAT------------TCCC--ATG------------TT---------AACCCGTGAGGCGG-------------------------CATA--G------------------------------TTAAAACACTTCCATTTTTGTTAAAAAGAAC--------AC---------------------------------------------------------------------------------------------GTCCGTAG--------------------------------------------------------------------------------------------------------------------------------------TTTTAATT------AAATTA--A--------------------------------------------------------------------T---TATACAAGT-------TACTCCT--AGAGTAAAAGGGTATACTAGATTCGTTGA-------AAAGT-AAGTAACAGGCAGAAGGAAACGTTA-------TATAAATTATA--TATATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATACTAGATTCGTTGA-------AAAGT-AAG................................................2740.2511000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGA-------AAAGT-AAG................................................2540.2511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCT--AGAGTAAAAGGGT................................................................................1970.1410000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTTGA-------AAAGT-AAGTAA.............................................2370.1410000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTTGA-------AAAGT-AAGT...............................................2180.1311000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AGAGTAAAAGGGTATACTAGATTCGT...................................................................27200.1022000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAGATTCGTTGA-------AAAGT-...................................................20200.0510001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTTGA-------AAAGT-...................................................23200.0510000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AGAGTAAAAGGGTATACTAGATT......................................................................24200.0511000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTT..................................................................22200.0510000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAACGT............................19200.0510000010
dp5
CACTTTT---------TAT-TG------------------------------------------------CACCTATAAATTTGGGGGTT------------------TA------CTTTA-----------------------------------------------------G-CTCTAGCATGCATAAAATATGCTTAATATTAAGGCGTTT-------------GAATTA-------------------------------------------TTAGAAGTGT--GAAAG----------------------------------------------------------------------------------------------------------------------------------------CAGTTTT-------------------------------G-------------------------------------------------------AAACAAGA--------TCT--------------------GTATTCGTTCACAGC--------CCGGC----AATAGAGTT--TTGT---TATACCCG------------------------------ATACTAGATTTGTGGTGAAAATGGATGT-GTGTAACGTCCTGAAGGAATCGTTTCCGACCACATAAAGTAT---TATA-TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGT-GTG................................................23203.707400000074000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGT-G..................................................21202.905800000058000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGT-G..................................................20201.402802800000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGT-GTGTAA.............................................26200.701400000014000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGT-GTG................................................22200.651300000000130
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGT-GTGTAACGTCCTGAAGGAATC..............................25120.5060600000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGT-G..................................................19200.3060600000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCACATAAAG............2770.2920100000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGATGT-GTGTAACGTC.........................................20200.2550000000050
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATCGTTTCCGACCACATAAAGTA..........2760.1710000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGT-GTGTAACGTCCTGAAGGAATCG.............................26120.1720200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGT-GTG................................................21200.1530000000030
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGT-GTC................................................23200.1530000000030
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCACATAA..............2490.1110000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCACATA...............2490.1110100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCA...................20100.1010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGT-GTGTAACGTCCTGAAGGAATCGT............................27120.0810100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-GTGTAACGTCCTGAAGG..................................20130.0810100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGT-GTGTAACGTCCTGAAGGAA................................23130.0810100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCTGAAGGAATCGTTTCCGACC....................25140.0710100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGAAGGAATCGTTTCCGACC....................24140.0710100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAATCGTTTCCGACC....................20150.0710100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCCTGAAGGAATCGTTTCCGACA....................26170.0610100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCGACCACATAAAGT...........19190.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAATG.........................................................19200.0510100000000
droPer2
TTTTTTA---------G-------GTCAAGT------------GAATGCAGAGATTTTTCCCA-----------------------------------------------------------------------------TTG-------AAGATTC---------CACCACTGAT----------------------------TTGGA--CTAA-------------GCTATT------------------------------------------------------------------------------------------CC------------------------ATA-------------------TACTAT------------------------------------------------GT------TTTCCTCGTTTATTTGAATT---------------------------------------------------------------------------------T-TCGCAG------A--CGTGAAT---TTT------------------------------------CCATCTTTT---TATACGCGA-------TACTTAAAATGGGTATTGGGGTATATTAGATTTGCTGTAAAAGTGGATGT-GTGTAACGTCCAGAAGGAATCGTTTCCGACCCTATAAAGTATA--TATATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGGATGT-GTGTAACG...........................................21200.306060000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGAAGGAATCGTTTCCG.......................24200.102002000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGATGT-GTGTAAC............................................18200.051010000
droWil2
TTAGAGT---------ATT-CTTGGTCAAGT-------------------------------------------------------------------------------------------ATTCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTATGGACATACATATGTACATACATACA---------------------TACATA-------------------TGTGAT------------------------------------------------TG------TGTCTGCATTGATTTAAATTTTTAAATATTTTTTG-------------------------------------------------------TTGAAGTT--------TCTAAAAAAT--TAC----ATTTTTGT-----------------------G----AATAAATGC--TTGT---TATACCATT------------GC--------AGAGGGTGTTAAAAAAATGGTCA-------AATTTGTTGTAGCGCACAGAAGGAGACGTTTCCGACCCCGTAAAGAATG--TATATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGACGTTTCCGACCCCGTAAAGA...........2611.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGCGCACAGAAGGAGACGTT...........................24120.25300030
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGCGCACAGAAGGAGACGTTTC.........................26110.09100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCACAGAAGGAGACGTTTCC........................22110.09100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGCGCACAGAAGGAGACGTTT..........................25120.08100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGCGCACAGAAGGAGAC..............................20130.08100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGCGCACAGAAGGAGACGTTTG.........................26140.07101000
droVir3
ATTTTGTTGTATGGCGAT---------------------ACCTATCTTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCTGT-------------------------------------------------------------------------------------------------------------------------------------GGT-----------TTAGGAATTCCCAAG------TAGAGTT-CTTC----------------CTACAA--------------------------------GAGCC--------------------------------------------------------------------------------------------------------------------------------------------------T----CTTCTCTGT------------------------------------G--TTTT---TATACCCTT------------GC--------AGAGGGTATTATAATTTTGTCGC-------GAAAT-GTGTAACGCATAGAAGGAGACATCTCCGACCCCATAAAGTATATATATATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-GTGTAACGCATAGAAGGAGAC..............................25201.05210000000000000000000000021000000000000000000000000000000000000000
.................T---------------------ACCTATCTTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.402000000000000000000000000002000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-GTGTAACGCATAGAAGGA.................................22200.357000000000000000000000000000070000000000000000000000000000000000
..............................................TTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCTGT-------------------------------------------------------------------------------------------------------------------------------------GGT-----------TTA.............................................................................................................................................................................................................................................................................................................................................................................................................................2640.251001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAT-GTGTAACGCATAGAAGGAGAC..............................26200.204000102000000000000000000000000000100000000000000000000000000000
............GGCGAT---------------------ACCTATCTTAGTGT----------------TT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGTCGC-------GAAAT-GTGT...............................................2050.201000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TTC----------------CTACAA--------------------------------GAGCC--------------------------------------------------------------------------------------------------------------------------------------------------T----CTTCTCTGT------------------------------------................................................................................................................................2450.201000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T-CTTC----------------CTACAA--------------------------------GAGCC--------------------------------------------------------------------------------------------------------------------------------------------------T----CTTCTCTGT------------------------------------G--TC...........................................................................................................................2950.201000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-GTGTAACGCATAGAAGGAGACAT............................27200.153000000300000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACGCATAGAAGGAGACA.............................21200.153000000000000000000000000300000000000000000000000000000000000000
..............................................TTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCTGT-------------------------------------------------------------------------------------------------------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111000000000000000000000000000000000010000000000000000000000000000
..............................................TTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCTGT-------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGCATAGAAGGAGACATCTCCGACC....................29200.102002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAT-GTGTAACGCATAGAAGGAGACA.............................27200.102000000000000000000000000020000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-GTGTAACGCATAGAAG...................................20200.102000000000000000000000002000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT------------------------------------G--TTTT---TATACCCTT------------GC--------AG.....................................................................................21130.081000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------G--TTTT---TATACCCTT------------GC--------AGAGGGT................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-GTGTAACGCATAGAAGGAG................................23200.051000000000000000000000000000000000000000000000000000000000001000
..............................................TTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-GTGTAACGCATAGAAGGAGACA.............................24200.051001000000000000000000000000000000000000000000000000000000000000
............................................TCTTAGTGT----------------TTAT----------------------------------------------------------------------------------AT----TGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------GC--------AGAGGGTATTATAATTTTGTCG.................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------GAAAT-GTGTAACGCATAGAAGGAG................................25200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
CTTGTTG---------ACTTCTTGGTCAAGA-------------------------------------------------------------------------------------------ATTTGAGGGTGT------C--------------------------------------------------------TA----------------TAAGGGTGTTTAT-----------------------------AGA---------------------------------------TGGGGTCCTC--ATGTTTAGCTATTAT---------------------TTTATGTTTGATTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------TT--------TCT--------------------GTACTGAATGTCACT--------ATAGT----CGTGAAGTA--TTTT---TATACCCTGAACCCATTTTCAGT--GGGAAATCAGGGTATAATGGTTTTGTTGA-------AATGT-ATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATA--TATATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ATGTAACAGGCAGAAGGAGG...............................22200.306600000
.......................................................................................................................................................................................................................................................................................................................................................................TGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------T........................................................................................................................................................................................................29110.273300000
...................................................................................................................................................................................................................................................................................................................................................................................A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------TT--------TCT--------------------GTAC....................................................................................................................................................................27120.172200000
............................................................................................................................................................................................................................................................................................................................................................................TAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------TT--------...............................................................................................................................................................................................25120.172200000
......................................................................................................................................................................................................................................................................................................................................................................TTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACC.............................................................................................................................................................................................................................28120.172200000
.........................................................................................................................................................................................................................................................................................................................................................................TACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACC.............................................................................................................................................................................................................................25130.152200000
.....TG---------ACTTCTTGGTCAAGA-------------------------------------------------------------------------------------------ATTTGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141000010
...............................................................................................................................................................................................................................................................................................................................................................TGTTTGATTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------A.......................................................................................................................................................................................................................................................................................27150.132200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT--------------------GTACTGAATGTCACT--------ATAGT----CG......................................................................................................................................2580.131100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAATGTCACT--------ATAGT----CGTGAAGT................................................................................................................................2780.131000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAGGCGTGGCA........................18200.102200000
.........................................................................................................................................................................................................................................................................................................................................................................TACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------TT--------...............................................................................................................................................................................................28110.091100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACT--------ATAGT----CGTGAAGTA--TTTT---TC....................................................................................................................26110.091100000
......................................................................................................................................................................................................................................................................................................................................................................TTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------.........................................................................................................................................................................................................29110.091100000
.........................................................................................................................................................................................................................................................................................................................................................................TACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACCT-------------------T........................................................................................................................................................................................................27120.081100000
..................TTCTTGGTCAAGA-------------------------------------------------------------------------------------------ATTTGAGGGTGT------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081000001
...........................................................................................................................................................................................................................................................................................................................................................................CTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACC.............................................................................................................................................................................................................................23130.081100000
..........................................................................................................................................................................................................................................................................................................................................................................ACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACC.............................................................................................................................................................................................................................24130.081100000
............................................................................................................................................................................................................................................................................................................................................................................TAGTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACC.............................................................................................................................................................................................................................22140.071100000
............................................................................................................................................................................................................................................................................................................................................................TTATGTTTGATTGTACTAG............................................................................................................................................................................................................................................................................................................................................................................19140.071100000
............................................................................................................................................................................................................................................................................................................................................................TTATGTTTGATTGTACTAGTA--A---------A------------------------GGT--................................................................................................................................................................................................................................................................................................................................26140.071100000
..............................................................................................................................................................................................................................................................................................................................................................................GTA--A---------A------------------------GGT--CAA-------------------------------------ATTTT--------------------------------------------------CACC.............................................................................................................................................................................................................................20140.071100000
...................................................................................................................................................................................................................................................................................................................................................................TGATTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATT.....................................................................................................................................................................................................................................................................................25150.071100000
...................................................................................................................................................................................................................................................................................................................................................................TGATTGTACTAGTA--A---------A------------------------GG...................................................................................................................................................................................................................................................................................................................................18150.071100000
...............................................................................................................................................................................................................................................................................................................................................................TGTTTGATTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATT.....................................................................................................................................................................................................................................................................................29150.071100000
.............................................................................................................................................................................................................................................................................................................................................................TATGTTTGATTGTACTAGTA--A---------A------------------------GGT--CA..............................................................................................................................................................................................................................................................................................................................27150.071100000
...............................................................................................................................................................................................................................................................................................................................................................TGTTTGATTGTACTAGTA--A---------A------------------------GGT--CA..............................................................................................................................................................................................................................................................................................................................25150.071100000
...............................................................................................................................................................................................................................................................................................................................................................TGTTTGATTGTACTAGTA--A---------A------------------------GGT--C...............................................................................................................................................................................................................................................................................................................................24150.071100000
......................................................................................................................................................................................................................................................................................................................................................................TTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATT.....................................................................................................................................................................................................................................................................................22150.071100000
................................................................................................................................................................................................................................................................................................................................................................GTTTGATTGTACTAGTA--A---------A------------------------GGT--CAA-------------------------------------ATT.....................................................................................................................................................................................................................................................................................28150.071100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GGGAAATCAGGGTATAATGGTTTTGT...................................................................28200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGT--GGGAAATCAGGGTATAATGGTTTTG....................................................................28200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GGGAAATCAGGGTATAATGGTTTTG....................................................................27200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GGGAAATCAGGGTATAAT...........................................................................20200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GGGAAATCAGGGTATAATGGTT.......................................................................24200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTTTGTTGA-------AATGT-ATGTAA.............................................24200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAGGCGT............................18200.051100000
droGri2
TTATATA---------TGT-------G---TATAT----ATGTATGT---AATTC--TTCTGG-----------TGGCACGT----------------------------------------------------TTA-------------------------------------------------------------------AGAAA--TTCG-------------TCAACA------------------------------------------------------------------------------------------TCATGA------TAT--------------------------------------------------------------------------------------GAATATTTCTTT-------------------------------G-------------------------------------------------------GCA---------------G------AGATT----TATGCTTAC------------------------------------G--TTTT---TAGACCCCG------------AC--------AGAGGGTATTGTAATTTTGTTGT-------GGTGT-TTGTAACCCATTGAAGGAGACGTGTTCGACTCCATAAAGTATA--TATAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:00 AM