ID:

dan_3329

 Coordinate:

scaffold_13417:3343988-3344138 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.1 -15.0

Flybase annnotation

exon [dana_GLEANR_2590:6]; CDS [Dana\GF20186-cds]; intron [Dana\GF20186-in]

Repeatable elements

NameClassFamilyStrand
Hoana8DNAhAT-hobo-
mature
  1. scaffold_9501:739-765 -
  2. scaffold_12605:13107-13133 -
  3. scaffold_12911:2028311-2028337 -
  4. scaffold_12948:401007-401033 -
  5. scaffold_13077:164684-164710 -
  6. scaffold_13111:1345949-1345975 -
  7. scaffold_13230:2603873-2603899 -
  8. scaffold_13239:409354-409380 -
  9. scaffold_13239:591921-591947 -
  10. scaffold_13266:1003779-1003805 -
  11. dan_2034  scaffold_13266:15944072-15944098 -
  12. scaffold_13266:19335301-19335327 -
  13. scaffold_13337:10673875-10673901 -
  14. scaffold_13337:11729506-11729532 -
  15. scaffold_13340:11963642-11963668 -
  16. scaffold_13340:15656942-15656968 -
  17. dan_3329  scaffold_13417:3344065-3344091 -
  18. scaffold_13417:5265363-5265389 -
  19. scaffold_13417:5271765-5271791 -
  20. scaffold_13417:6215551-6215577 -
star
  1. scaffold_8944:3262-3285 -
  2. scaffold_11844:890-913 -
  3. scaffold_12911:814436-814459 -
  4. scaffold_12916:3293460-3293483 -
  5. scaffold_12916:13917991-13918014 -
  6. scaffold_12929:356950-356973 -
  7. scaffold_12947:225162-225185 -
  8. scaffold_12947:1079751-1079774 -
  9. scaffold_12984:431970-431993 -
  10. scaffold_13230:3539515-3539538 -
  11. scaffold_13248:2346055-2346078 -
  12. scaffold_13260:2048970-2048993 -
  13. scaffold_13266:11293961-11293984 -
  14. scaffold_13266:12280962-12280985 -
  15. scaffold_13266:16920945-16920968 -
  16. scaffold_13280:912471-912494 -
  17. scaffold_13280:1387307-1387330 -
  18. scaffold_13335:2665036-2665059 -
  19. scaffold_13337:12315236-12315259 -
  20. dan_3329  scaffold_13417:3344108-3344131 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATATACGATCCGCTACATATCTAATAATATAAGATGCGTGGCGCCACCTAGCGGACTGCGACTGAACTGCAAGGGTATATAAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTTATCAAACAATAAACATTATTTCATAAGTTTGTTTTAGAACTTAGTTTTATAAGCTTAATCAACTTATTTATTTTTATAGCGATGTTCCCCCTGATGTCGTATCCCTAACTATAACTCTTATATCACGAG
*********************************************************......((((...(((((......((((((((......))))))))......)))))...))))...******************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V039
embryo
 V055
head
.......................................................................................................................................................................................................GACGATGTTCCCCCTGATGTCGT............................. 23 2 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................CCCCTGATGTCGTATCCCT....................... 19 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GATGTTCCCCCTGATGTCGT............................. 20 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................................................................GACTATGACTCTGATATCAC... 20 3 5 0.60 3 2 1 0 0 0
............................................................................................................................................................................................................................GTATCCCTCACTACAACTCT........... 20 2 2 0.50 1 0 0 0 1 0
.............................................................................................................................................................................AGCGTAATCAACTTATCT............................................................ 18 2 7 0.14 1 0 0 0 0 1
.................................................................................................GAAGTTAGCTTTCCTTTCTTGTTTTAT............................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
..........................................................................................TCCGCCCGAAGTTAGCTTTCCTTTCT....................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
...............................................................................TAAACTTCGGCTCCGCCCGAAGTTAGC................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
........................TAATATAAGATGCGTGGC................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0
.........................................................GCGACTGAACTGCAAGGGTATATA.......................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TATATGCTAGGCGATGTATAGATTATTATATTCTACGCACCGCGGTGGATCGCCTGACGCTGACTTGACGTTCCCATATATTTGAAGCCGAGGCGGGCTTCAATCGAAAGGAAAGAACAAAATAGTTTGTTATTTGTAATAAAGTATTCAAACAAAATCTTGAATCAAAATATTCGAATTAGTTGAATAAATAAAAATATCGCTACAAGGGGGACTACAGCATAGGGATTGATATTGAGAATATAGTGCTC
*******************************************************************************************************************************......((((...(((((......((((((((......))))))))......)))))...))))...********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
 V106
head
.............................................TGGATCGCCTGACGCTGACT.......................................................................................................................................................................................... 20 0 20 0.20 4 4 0 0 0 0 0
.....................................................CTGACGCTGACTTGACGTTCCCAT.............................................................................................................................................................................. 24 0 20 0.15 3 0 0 3 0 0 0
.......................................CCGCGGTGGATCGCCTGACGCTGACTTG........................................................................................................................................................................................ 28 0 20 0.15 3 0 3 0 0 0 0
......................................ACCGCGGTGGATCGCCTGACGCT.............................................................................................................................................................................................. 23 0 20 0.10 2 0 0 0 2 0 0
.......................................................GACGCTGACTTGACGTTCCCATATATT......................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
....................................GCACCGCGGTGGATCGCCTGAC................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 1 0 0
.........................................................................CCATATATTTGAAGCCGAGGCGGGC......................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................CGAAAGGAAAGAACAAAATA............................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................AGGCGGGCTTCAATCGAAAG............................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1 0
TATATGCTAGGCGATGTAT........................................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 1
.ATATGCTAGGCGATGTATAGATTATT................................................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................CGGGCTTCAATCGAAAGGAAAGAACAAA.................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0 0
.................................TACGCACCGCGGTGGATCGCCTGAC................................................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
.........................................GCGGTGGATCGCCTGACGCTGACT.......................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................CAATCGAAAGGAAAGAACA.................................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13417:3343938-3344188 - dan_3329 ATATACGAT-------------------------C---------CGC--TA-CATAT----CTA------------------------ATAATATAAGATG---CGTG-GCGCCACCT-A-----------------GCGGACTGC----GAC--------------------------TGAACTGCAAGGGTATATAAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTTATCAA-------ACAATAA----------------ACATTA-----------------------TTTCATAA--GTTTGTTTTAGAACT----------------------------------------------------------------------------------------------------------TAGTTTT--------------ATAA-GCTTAAT-----------C------------------------------------------------------AACTTATTTATTTTTATAGCGATGTTCCCCCTGATGTCGTATC-CCTAACTATAACTCTTATATCACGAG
droBip1 scf7180000396759:958211-958412 + ATATCCGAT-------------------------GTTTG-----C-------GATATATATCC-------------------------G-------------------------------------------------------------GTT--------------------------TTAACTGCAAGGGTATATAAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTATTATTAC-----------------------------------------TATTA-------------ATATAA--GTTTTTTT------------------------------------TTAATTTTTTTTTTATTATT---ATTATTATTTT--------------------------------------------------------------------------------------------------------------------------TTTTTTTAAATA-----------------------------ATATATCCGATTATATCTTATA-GCTATTTGG-----AACTGCCATACC
droKik1 scf7180000302266:237693-237900 - GTCTGTTTT-------------------------C---------GGCAT---TATT-ATTTA---------------------------TAATATAAA----------------------------------------T--ATGAA----AAC--------------------------CAATCTGCAAGGGTATACAAACTTCGGCGT-G-CCGAAGTTAGCTT-CCTTTCTTGTTTAAAATAAT----------TT----------------GCACAA-----------------------ACTCATAG--G--------AGAAAT----------------------------------------------------------------------------------------------------------TAGTCTT--------------AAAAAACCCAAAAAAAATTATTA--------T-----TTATAT------------------------ATATATTGTT------------------------------------GT--AATA-CTTAAGTTTTACTGTTCGGTCACAAG
droFic1 scf7180000453851:2102696-2102870 - CTTGAATAG-------------------------C---------AAA--TAAAATTT----TC-------------------------GAAATAT-------------------------------------------------------TTG--------------------------ATGACTGCAAGGGTATATAAGCTTCGGCTT-G-CCGAAGCTAGCTT-CCTTTCTTGTTATGTTTG-------AAGCTGA----------------AGCATATAATTGATCTTA-------------AAACAG--ATTT----------TAA-AAT-ATTTA-------------------------ATTTGAATTATTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------A---------ATTAATAT------------------------------------TTTCTATTTGA
droEle1 scf7180000491212:648560-648772 - AAATCATAA-------------------------TT---------TT---AATGTTT----TCA------------------------AAAATAT-----------------------------------------------TTAA--TTCTTGCG-----------------------ATAGCTGCAAGGGTATATGAACTTCGGCTT-G-CCGAAGTTTGCTT-TCTTTCTTGTTTATAACTATATTTAAAAGTGTAA--------------------------GTAAAA-------TT--TTTTATAG--ATC-----------TGG-AATGTTT-AATGTCAAATTGTTTTTTCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTTCTTCCGGTTTTTGTTTTGTGTAAACATAACTC------------
droRho1 scf7180000777737:35716-35924 - TCGGCTCCG-------------------CCCGAAGTTAGCTTTAGAGAA---TATT-ATTTAC-------------------------A-------------------------------------------------------------GAA--------------------------TATTCTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTAATAATAC-----------------------------------------TTTTG-------------CAACAA--AATT-----------------------TTCATAATAT---------------ATTGGAATTATTTTA-TT---------------------------------------------------TGTCCCTATTTCTTGCAATG-------------------------------------------------------------------------------------------------------GTATCA--------TTAAT-ATACATTATCACTCTTATCT-TAAAG
droBia1 scf7180000302304:204446-204661 + AGAAACAAT-------------------------CC----------C--TAAAAATT----TC-------------------------A---------------CATG-GTGTTACTAAA-----------------GTTGATTAT--AACTT--------------------------ATAACTGCAAAGGTATACAAACTTCGGCTT-G-CCGAAGTTAACTT-CCTTTCTTGCTATATATCAC-----------------------------------------TTTTA-TATT--TT--TTATATAA--GCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTATACTTTTCATATATTACTTTCTTACATTTTATATAACACACT---------------------------------T---ATATTTTTTGTATTCGAAG----TCCACCCCTGA
droTak1 scf7180000415863:17988-18264 - ATATTATAT---AGATGTGATAGATACGATCGAA-----------------------------------------AAATTAATGTGAAATAATAAGAAATTTAACATTTTAGCCATTT-------------------GTAAATTAA--TAGAA--------------------------TGATCTGCAAGGGTATATAAGCTTCGGCTT-A-CCGACGCTTGCTT-TCTTTCTTGTTTATAATAA-------AACTCA----------------A----------------A-------------AAATAACTGTTATTTG------------------------------------TTGATTTT-TATGTATAACA---GTTATTCCCTTGACATTTAAAAACAAGTTAAAAAATTTAAAAAACATGCTAACCGTGTTTT--------------AT-----------------------------------------------------------------ATAACTTACT----------------------------------------------------ACA---------AATCTTA
droEug1 scf7180000409111:41118-41261 + TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGGGTATATAAACTTTGGCTT-G-CCGAAGTTAGCTT-CTTTAATTATTTTGTTGT-------TAAA-------------------------------------ATATTATTACT---AGCTA--TCAT-----------CTGAAG----------------------------------------------------------------------------------------------------GGCACCTGTTTTTTTAAATGTATGT-ATTATAT-----------TTTTGTTC--------------------------------------------------------------TTAGTGCT-------------------------------------------TTTC
dm3 chrX:15895774-15895883 - TTCCTTCGC-------------------------CTATT-----T-------GATA------------------------------------------------------------------ACTTATCGAA--------------------------TAATATATGTTTGTAACTTGCTTGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCGCCAGATGTTGTCTC-CCTAACCATAACATTAATATCGCGCG
droSim2 3r:1198214-1198326 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATATGAGCTTCGGCCT-G-CCGAAACCAACTT-CCCGTCTTGTTTCATTT-------------------------------------------------ATATTATTTCTTT----------TT-----------CTGAAT----------------------------------------------------------------------------------------------------GGGGCTT--------------GTTA-GCCAAAT-----------G------------------------------------------------------------------------------------------------------------AAATGAATTAATCCTA
droSec2 scaffold_18:1306497-1306606 + ATATCATAAAGCGAAC-----------------------------------------------------------------------------------------ATG-GGAATATTTGA---TT--------------------------TTGTTTTT-GATC-----ATA-AATTAAATTTTTGCAAGGGTACATAAGCTTCGGCTT-G-CCGAAGCTAGCTT-CCTTCCTTGTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:10084446-10084544 - TATTTTA--------------------------------------------------------------------------------------------------------------TGG---TTCAGTTTG--------------------------T-ATACATTTCTTAAACTTATTTCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCTCCAGATGTCGTCTC-ACTAACCATTACGTTAATATCGCGCG
droEre2 scaffold_4690:11154423-11154525 + GCCTGTT--------------------------------------------------------------------------------------------------------------TGGATATTTAGTGAG--------------------------TAATACATTTCATAAACTTATTTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCTCCAGATGTTGTCTC-CCTAACCATTACCTTAATATCGCGCG
dp5 Unknown_group_298:7506-7617 - ATAAAAA--------------------------------------------------------------------------------------------------------------TGG---TA----TTGAAAAATT--ATTTTAGAA-TTGTCATC-CCCC-----ACT-AACTATATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTGTAGTGCCTCCGGATGTAGGTTA-CCTAACAAAAACGTTGGTGTCACGGG
droPer2 scaffold_85:66707-66818 - ATAAAAA--------------------------------------------------------------------------------------------------------------TGG---TG----TTGAAAAATT--ATTTTAGAA-TTGTCATC-CCCC-----ACT-AACTATATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTGTAGTGCCTCCGGATATAGGTTA-CCTAACAATAACGTTGGTGTCACGGG
droWil2 scf2_1100000004909:8572184-8572396 - ACATATTTT---GAAC-----------------------------------------------------------------------------------------A------------------------TGTAAAATT--ATTAT--TACCA--------------------------AGGACTGCAAGGGTATATAAACTTCAGCATAG-CCGATGTTAGCTT-CTT-TGATATTTTTCATTTCATTTCAAAATTCAATTATTTGCTATATTTGCATACAAATGAG----TCGTTCTTTC---TAACTA--ATTT-----------CTAAAC-TTCT-----------------------------------ACT---GTTATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATC-TCTAATTACTACCTATATTCTTTTTA
droVir3 scaffold_12815:274129-274363 + ATATACTAT-------------------------TTTCC-----C-------GGTACTTCTTAGATAGGGGCAAAGCA----------------------------------CTATGAGT-----------------ATTATGAAA--AGGTT--------------------------GGGTCTGCAAGGGTATTAGATCTTTGGCGT-G-CCGAAGATAGCCCTTCTTTCTCGTTTTTTCTT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--ATTC----------TGC-TAACCTC-TTTGCTAATTT---------------GTTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-ACTAATTCTTACCCTTATAC----TA
droMoj3 scaffold_6500:11682909-11683001 + TTTTTATTT-------------------------T----------------------------------------------------------------------------------------TA----TTTTAGAATC--TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATAA--GTTT-----------TGAAAA-TTCT-GAA-----------------------------------------------------------------------------------------ACGAAATGT--------------ATAA-ACTAAGT-----------T------------------------------------------------------AATTTATTTAT------------------------------------------------TTCTTTAACGA
droGri2 scaffold_15081:3780681-3780808 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATCTGAACTTCGGCTT-G-GCCATGTTAGCCGTTCTTTCGTGATTTCTATA-------TTGCTGA----------------TCAATA---------------TTACTTCA-------A--GGT---TTTCGA-----------------T-----------------------------------------------------------------------------------------GCGAGGTCA--------------ATG-----------------------------------------------------------------GAACTTAGCTGGATTTTTGAT-------------------------------------------------------TTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ATATACGAT-------------------------C---------CGC--TA-CATAT----CTA------------------------ATAATATAAGATG---CGTG-GCGCCACCT-A-----------------GCGGACTGC----GAC--------------------------TGAACTGCAAGGGTATATAAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTTATCAA-------ACAATAA----------------ACATTA-----------------------TTTCATAA--GTTTGTTTTAGAACT----------------------------------------------------------------------------------------------------------TAGTTTT--------------ATAA-GCTTAAT-----------C------------------------------------------------------AACTTATTTATTTTTATAGCGATGTTCCCCCTGATGTCGTATC-CCTAACTATAACTCTTATATCACGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTGATGTCGTATC-CCT.......................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCCCCCTGATGTCGT..............................2011.001000010
......................................................................................................................................................................................................................GAAGTTAGCTTTCCTTTCTTGTTTTAT..........................................................................................................................................................................................................................................................................................................................................................................27200.102020000
...............................................................................................................................................................................................................TCCGCCCGAAGTTAGCTTTCCTTTCT..................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
....................................................................................................................................................................................................TAAACTTCGGCTCCGCCCGAAGTTAGC............................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.........................................................................................TAATATAAGATG---CGTG-GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
................................................................................................................................................GC----GAC--------------------------TGAACTGCAAGGGTATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droBip1
ATATCCGAT-------------------------GTTTG-----C-------GATATATATCC-------------------------G-------------------------------------------------------------GTT--------------------------TTAACTGCAAGGGTATATAAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTATTATTAC-----------------------------------------TATTA-------------ATATAA--GTTTTTTT------------------------------------TTAATTTTTTTTTTATTATT---ATTATTATTTT--------------------------------------------------------------------------------------------------------------------------TTTTTTTAAATA-----------------------------ATATATCCGATTATATCTTATA-GCTATTTGG-----AACTGCCATACCSizeHit CountTotal NormTotal
No Reads
droKik1
GTCTGTTTT-------------------------C---------GGCAT---TATT-ATTTA---------------------------TAATATAAA----------------------------------------T--ATGAA----AAC--------------------------CAATCTGCAAGGGTATACAAACTTCGGCGT-G-CCGAAGTTAGCTT-CCTTTCTTGTTTAAAATAAT----------TT----------------GCACAA-----------------------ACTCATAG--G--------AGAAAT----------------------------------------------------------------------------------------------------------TAGTCTT--------------AAAAAACCCAAAAAAAATTATTA--------T-----TTATAT------------------------ATATATTGTT------------------------------------GT--AATA-CTTAAGTTTTACTGTTCGGTCACAAGSizeHit CountTotal NormTotal
No Reads
droFic1
CTTGAATAG-------------------------C---------AAA--TAAAATTT----TC-------------------------GAAATAT-------------------------------------------------------TTG--------------------------ATGACTGCAAGGGTATATAAGCTTCGGCTT-G-CCGAAGCTAGCTT-CCTTTCTTGTTATGTTTG-------AAGCTGA----------------AGCATATAATTGATCTTA-------------AAACAG--ATTT----------TAA-AAT-ATTTA-------------------------ATTTGAATTATTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------A---------ATTAATAT------------------------------------TTTCTATTTGASizeHit CountTotal NormTotal
No Reads
droEle1
AAATCATAA-------------------------TT---------TT---AATGTTT----TCA------------------------AAAATAT-----------------------------------------------TTAA--TTCTTGCG-----------------------ATAGCTGCAAGGGTATATGAACTTCGGCTT-G-CCGAAGTTTGCTT-TCTTTCTTGTTTATAACTATATTTAAAAGTGTAA--------------------------GTAAAA-------TT--TTTTATAG--ATC-----------TGG-AATGTTT-AATGTCAAATTGTTTTTTCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTTCTTCCGGTTTTTGTTTTGTGTAAACATAACTC------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCGGCTCCG-------------------CCCGAAGTTAGCTTTAGAGAA---TATT-ATTTAC-------------------------A-------------------------------------------------------------GAA--------------------------TATTCTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTCCTTTCTTGTTTAATAATAC-----------------------------------------TTTTG-------------CAACAA--AATT-----------------------TTCATAATAT---------------ATTGGAATTATTTTA-TT---------------------------------------------------TGTCCCTATTTCTTGCAATG-------------------------------------------------------------------------------------------------------GTATCA--------TTAAT-ATACATTATCACTCTTATCT-TAAAGSizeHit CountTotal NormTotal
No Reads
droBia1
AGAAACAAT-------------------------CC----------C--TAAAAATT----TC-------------------------A---------------CATG-GTGTTACTAAA-----------------GTTGATTAT--AACTT--------------------------ATAACTGCAAAGGTATACAAACTTCGGCTT-G-CCGAAGTTAACTT-CCTTTCTTGCTATATATCAC-----------------------------------------TTTTA-TATT--TT--TTATATAA--GCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTATACTTTTCATATATTACTTTCTTACATTTTATATAACACACT---------------------------------T---ATATTTTTTGTATTCGAAG----TCCACCCCTGASizeHit CountTotal NormTotal
No Reads
droTak1
ATATTATAT---AGATGTGATAGATACGATCGAA-----------------------------------------AAATTAATGTGAAATAATAAGAAATTTAACATTTTAGCCATTT-------------------GTAAATTAA--TAGAA--------------------------TGATCTGCAAGGGTATATAAGCTTCGGCTT-A-CCGACGCTTGCTT-TCTTTCTTGTTTATAATAA-------AACTCA----------------A----------------A-------------AAATAACTGTTATTTG------------------------------------TTGATTTT-TATGTATAACA---GTTATTCCCTTGACATTTAAAAACAAGTTAAAAAATTTAAAAAACATGCTAACCGTGTTTT--------------AT-----------------------------------------------------------------ATAACTTACT----------------------------------------------------ACA---------AATCTTASizeHit CountTotal NormTotal
No Reads
droEug1
TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGGGTATATAAACTTTGGCTT-G-CCGAAGTTAGCTT-CTTTAATTATTTTGTTGT-------TAAA-------------------------------------ATATTATTACT---AGCTA--TCAT-----------CTGAAG----------------------------------------------------------------------------------------------------GGCACCTGTTTTTTTAAATGTATGT-ATTATAT-----------TTTTGTTC--------------------------------------------------------------TTAGTGCT-------------------------------------------TTTCSizeHit CountTotal NormTotal
No Reads
dm3
TTCCTTCGC-------------------------CTATT-----T-------GATA------------------------------------------------------------------ACTTATCGAA--------------------------TAATATATGTTTGTAACTTGCTTGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCGCCAGATGTTGTCTC-CCTAACCATAACATTAATATCGCGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGATGTTGTCTC-CCTAACCATAAC..............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGTTGTCTC-CCTAACCA..................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TATATGTTTGTAACTTGCTTGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCTC-CCTAACCATAACATT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATATGTTTGTAACTTGCTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTTGTCTC-CCTAACCATAAC..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCGCCAG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTTCCGCCAGATGTTGTCTC-CC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCCGCCAGATGTTGTCTC-..........................2311.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCTC-CCTAACCATAACATTAATA.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACCATAACATTAATATCGCGC.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATATGAGCTTCGGCCT-G-CCGAAACCAACTT-CCCGTCTTGTTTCATTT-------------------------------------------------ATATTATTTCTTT----------TT-----------CTGAAT----------------------------------------------------------------------------------------------------GGGGCTT--------------GTTA-GCCAAAT-----------G------------------------------------------------------------------------------------------------------------AAATGAATTAATCCTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................TT----------TT-----------CTGAAT----------------------------------------------------------------------------------------------------GGGGCTT--------------GTTA-...............................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................ATATGAGCTTCGGCCT-G-CC.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
droSec2
ATATCATAAAGCGAAC-----------------------------------------------------------------------------------------ATG-GGAATATTTGA---TT--------------------------TTGTTTTT-GATC-----ATA-AATTAAATTTTTGCAAGGGTACATAAGCTTCGGCTT-G-CCGAAGCTAGCTT-CCTTCCTTGTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TATTTTA--------------------------------------------------------------------------------------------------------------TGG---TTCAGTTTG--------------------------T-ATACATTTCTTAAACTTATTTCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCTCCAGATGTCGTCTC-ACTAACCATTACGTTAATATCGCGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCCTCCAGATGTCGTCTC-A.........................2411.00100000010000
droEre2
GCCTGTT--------------------------------------------------------------------------------------------------------------TGGATATTTAGTGAG--------------------------TAATACATTTCATAAACTTATTTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCGATGTTCCTCCAGATGTTGTCTC-CCTAACCATTACCTTAATATCGCGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
ATAAAAA--------------------------------------------------------------------------------------------------------------TGG---TA----TTGAAAAATT--ATTTTAGAA-TTGTCATC-CCCC-----ACT-AACTATATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTGTAGTGCCTCCGGATGTAGGTTA-CCTAACAAAAACGTTGGTGTCACGGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATAAAAA--------------------------------------------------------------------------------------------------------------TGG---TG----TTGAAAAATT--ATTTTAGAA-TTGTCATC-CCCC-----ACT-AACTATATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGTGTAGTGCCTCCGGATATAGGTTA-CCTAACAATAACGTTGGTGTCACGGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACATATTTT---GAAC-----------------------------------------------------------------------------------------A------------------------TGTAAAATT--ATTAT--TACCA--------------------------AGGACTGCAAGGGTATATAAACTTCAGCATAG-CCGATGTTAGCTT-CTT-TGATATTTTTCATTTCATTTCAAAATTCAATTATTTGCTATATTTGCATACAAATGAG----TCGTTCTTTC---TAACTA--ATTT-----------CTAAAC-TTCT-----------------------------------ACT---GTTATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATC-TCTAATTACTACCTATATTCTTTTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................ATTAT--TACCA--------------------------AGGACTGCAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................23200.20404000
................................................................................................................................................................................................TATATAAACTTCAGCATAG-CCGATGT................................................................................................................................................................................................................................................................................................................................................................................................26110.09101000
.............................................................................................................................................................................................GGGTATATAAACTTCAGCATAG-CCGA...................................................................................................................................................................................................................................................................................................................................................................................................26190.05101000
.................................................................................................................................................T--TACCA--------------------------AGGACTGCAAGGGTATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................ACCA--------------------------AGGACTGCAAGGGTATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...............................................................................................................................................TAT--TACCA--------------------------AGGACTGCAAGGGTATA.......................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..................................................................................................................................................................................................................G-CCGATGTTAGCTT-CTT-TG...................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
droVir3
ATATACTAT-------------------------TTTCC-----C-------GGTACTTCTTAGATAGGGGCAAAGCA----------------------------------CTATGAGT-----------------ATTATGAAA--AGGTT--------------------------GGGTCTGCAAGGGTATTAGATCTTTGGCGT-G-CCGAAGATAGCCCTTCTTTCTCGTTTTTTCTT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--ATTC----------TGC-TAACCTC-TTTGCTAATTT---------------GTTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-ACTAATTCTTACCCTTATAC----TASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTG..................................222018.5537100620000000000000000000000018800390000082000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCC...............................252010.85217000240000000000000000000019200000000000000001000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------..........................................................................................................................................................................................................................................................................................................24209.2518500000000000000000000000000517900000000001000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGC...........................................................................................................................................................................................................................................................................................................................20205.0510100000000088000000000000020000000000110000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--A.................................................................................................................................................................................................................................................................................................27204.158300000000000000000000000028005500000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAAT........................................................................................................................................................................................................................................................................................................................23203.50700000000000000000000000000036600000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCT..............................26203.25650059000000000600000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--AT................................................................................................................................................................................................................................................................................................24203.15630000000000000000000000000063000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--..................................................................................................................................................................................................................................................................................................22202.60520000000000000000000030000049000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------A.........................................................................................................................................................................................................................................................................................................25202.35470000000045000000000000000000020000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGT.................................23202.104200000000000000000000000000000030000180000008000001300000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTA.............................................................................................................................................................................................................................................................................................................................18202.05410000000000360000000000000000000050000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--ATTC----------....................................................................................................................................................................................................................................................................................26202.05410000000000000000000000030000002036000000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------A.........................................................................................................................................................................................................................................................................................................21201.80360000002000000000000000000520900000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--ATT...............................................................................................................................................................................................................................................................................................25201.75350000000000000000000000006029000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--ATTC----------TG..................................................................................................................................................................................................................................................................................25201.45290000005000006000000000000000000018000000000000000000000000000000
................................................................................................................................................................................................TATTAGATCTTTGGCGT-G-CCGAAGAT...............................................................................................................................................................................................................................................................................................................................................................................................26201.052100000000000000000000000001000000000110000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------ACACT.....................................................................................................................................................................................................................................................................................................25200.95190000000000000000000000000001800000000000000000000000000000100000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--..................................................................................................................................................................................................................................................................................................26200.95190000100000000000000000000000000000180000000000000000000000000000
........................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCGT-G-.......................................................................................................................................................................................................................................................................................................................................................................................................26200.7515000000000000000000000000000700000000800000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGT.....................................19200.7515008000000000000000000000700000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------ACAC......................................................................................................................................................................................................................................................................................................24200.70140000000000000000000000000000000000000140000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCT...................................25200.6012000000000000000000000000000003000000720000000000000000000000000
...................................................................................................................................................................................................................................................T-------GGGATGG----------------AT---AAAGCTAGCAATG-------------AC........................................................................................................................................................................................................................................................................................................25200.55110010000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------..........................................................................................................................................................................................................................................................................................................20200.50100000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTC....................................20200.5010000000000000010000000000080000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTG..................................26200.408000000100000000000002000410000000000000000000000000000000000000
...........................................................................................................................................TATGAAA--AGGTT--------------------------GGGTCTGCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................23200.408000000000000000000003000401000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTC................................28200.408000000000000000000000000005300000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACA.......................................................................................................................................................................................................................................................................................................19200.357000000000000000000000000005020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TTC----------TGC-TAACCTC-TTTGCTAATTT---------------G.............................................................................................................................................................................................................................................2530.331001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTC....................................24200.306000060000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAG............................................................................................................................................................................................................................................................................................................................19200.306000000000000000000000000000010000050000000000000000000000000000
................................................................................................................................................................................................................................................TCTT-------GGGATGG----------------AT---AAAGCTAGC...........................................................................................................................................................................................................................................................................................................................22200.306000000005000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--ATTC----------....................................................................................................................................................................................................................................................................................23200.306000000000000000000000000000000000006000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------ACAA......................................................................................................................................................................................................................................................................................................24200.255000000000000100000000000210000010000000000000000000000000000000
......................................................................................................................GT-----------------ATTATGAAA--AGGTT--------------------------GGGTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................24120.253000000010010000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCGT-G-C......................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000004000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTCTT-------GGGATGG----------------AT---AAAGCTA.............................................................................................................................................................................................................................................................................................................................21200.204000000002000000000000000000020000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCC...............................28200.204004000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TTC----------TGC-TAACCTC-TTTGCTAAT...............................................................................................................................................................................................................................................................22200.204004000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGT.................................27200.204002000000000000000000000010000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGT.....................................23200.204000000000000000000000000000000100000300000000000000000000000000
........................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................24200.204000000000000000000000002000000020000000000000000000000000000000
..........................................................TCTTAGATAGGGGCAAAGCA----------------------------------CTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.204000000000000000000000000000000000040000000000000000000000000000
.............................................................................................................................................................................................GGGTATTAGATCTTTGGCGT-G-CC.....................................................................................................................................................................................................................................................................................................................................................................................................23200.204000000000040000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGGCGT-G-CCGAAGATAGCCCTTCTTTC...................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000000000000000000000000000000000000004
..............................................................................................................................................................................................................................................TTTCTT-------GGGATGG----------------AT---AAAGCTAGC...........................................................................................................................................................................................................................................................................................................................24200.204000000020000000000000000000200000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAA.........................................................................................................................................................................................................................................................................................................................18200.204000000000000000000000000000000100000300000000000000000000000000
.........................................................TTCTTAGATAGGGGCAAAGCA----------------------------------CTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.204000000000010000000000000010002000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCA..............................26200.204000000000000000000000000030000000000010000000000000000000000000
.................................................................................................................TATGAGT-----------------ATTATGAAA--AGGTT--------------------------GGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................26120.172000000000000000000000000000000000002000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-AC........................24200.153000000000000000000000000200100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--A.................................................................................................................................................................................................................................................................................................23200.153000000200000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------AG........................................................................................................................................................................................................................................................................................................26200.153000000000000000000000000000000000030000000000000000000000000000
.........................................................................................................................................ATTATGAAA--AGGTT--------------------------GGGTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153000000010200000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--ATTC----------TG..................................................................................................................................................................................................................................................................................28200.153000000000000000000000000000000000000030000000000000000000000000
..........................................................TCTTAGATAGGGGCAAAGCA----------------------------------CTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000002100000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------ACACT.....................................................................................................................................................................................................................................................................................................29200.153000000003000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACACTG--ATTC----------TGC-................................................................................................................................................................................................................................................................................29200.153000000000000000000000000000000000000000020000000000000000000001
.............................................................................................................................................................................................................................................TTTTCTT-------GGGATGG----------------AT---AAAGC...............................................................................................................................................................................................................................................................................................................................21200.153000003000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAAG........................................................................................................................................................................................................................................................................................................................23200.153000000000000000000000000000300000000000000000000000000000000000
........................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGCGT-.........................................................................................................................................................................................................................................................................................................................................................................................................25200.153000020000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------TT........................................................................................................................................................................................................................................................................................................26200.153000000000000000000000000000300000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTTCTT-------GGGATGG----------------AT---AAAGC...............................................................................................................................................................................................................................................................................................................................20200.153000000000030000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................G--ATTC----------TGC-TAACCTC-TTTGCTAATTT---------------..............................................................................................................................................................................................................................................26200.102000000000000000000000000000000020000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--AT................................................................................................................................................................................................................................................................................................21200.102000000100000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAGCTAGCAATG-------------ACACTG--ATTC----------TGC-................................................................................................................................................................................................................................................................................25200.102000000000000000000000000200000000000000000000000000000000000000
................................................................................................................................................................................................................T-G-CCGAAGATAGCCCTTCTTTCTCGT...............................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000002000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAG......................................22200.102000000000000000000000000001000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCC...............................22200.102000000000000000000000000000100000010000000000000000000000000000
...........................................................................................................................................TATGAAA--AGGTT--------------------------GGGTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000002000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CTG--ATTC----------TGC-TAACCTC-TTTGCTAA................................................................................................................................................................................................................................................................25200.102000000000000000000000000020000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGT.................................26200.102001000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--..................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000200000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCT...................................20200.102002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTG..................................25200.102001000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................TTATGAAA--AGGTT--------------------------GGGTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000020000000000000000000000000000000000000
...........................................................................................................................................................................................AAGGGTATTAGATCTTTGGCGT-C-.......................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TATGAAA--AGGTT--------------------------GGGTCTGCAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000002000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTCTTACCCTTATAC----T.20200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TGCAAGGGTATTAGATCTTTGGC............................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAGTCTGTCCTAAT-ACTAATTCT.................27200.102000000000000000000000000020000000000000000000000000000000000000
.............................................................................................................................................TGAAA--AGGTT--------------------------GGGTCTGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000001001000000000000000000000000000000000
.......................................................................................................................................................TT--------------------------GGGTCTGCAAGGGTATTAGATCTT................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000010001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAA............................27200.102000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CTAGCAATG-------------ACACTG--ATTC----------TGC-................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000000000001000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-A.........................23200.102000000000000000000000000200000000000000000000000000000000000000
.......................................................................................................................................................................................................TCTTTGGCGT-G-CCGAAGATAGCCCTT........................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000010010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTC....................................21200.102000000000000000000000000002000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGT.................................24200.102000000000000000000000000002000000000000000000000000000000000000
................................................................................................................CTATGAGT-----------------ATTATGAAA--AGGTT--------------------------GGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................26120.081000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................TATGAGT-----------------ATTATGAAA--AGGTT--------------------------GGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................T-----------------ATTATGAAA--AGGTT--------------------------GGGTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................23180.061000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................T-------GGGATGG----------------AT---AAAGCTAGCA..........................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTTCTT-------GGGATGG----------------AT---AAAGCT..............................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000100000000000000000000000
.TATACTAT-------------------------TTTCC-----C-------GGTACTTCTTAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTG..................................24200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GGATGG----------------AT---AAAGCTAGCAATG-------------AC........................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--ATTC----------TGA-................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................ATGAAA--AGGTT--------------------------GGGTCTGCAAGGGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGG----------------AT---AAAGCTAGCAATG-------------ACACTG--..................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................ATTATGAAA--AGGTT--------------------------GGGTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................ACTTCTTAGATAGGGGCAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
......TAT-------------------------TTTCC-----C-------GGTACTTCTTAGATAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................TAGATCTTTGGCGT-G-CCGAA..................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCAGTCTGTCCTAAT-ACT.......................22200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--ATTC----------TGC-................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AGCAATG-------------ACACTG--ATTC----------TGC-TAA.............................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................TCTTTGGCGT-G-CCGAAGATAGCCC..........................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAT-ACTAATTCTTACCCTTATAC----..25200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAT.........................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................ATTATGAAA--AGGTT--------------------------GGGTCTGCAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................TTCTTAGATAGGGGCAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................TGGCGT-G-CCGAAGATAGCCC..........................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-ACTAA.....................28200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--ATT...............................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTA.............................21200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................T---AAAGCTAGCAATG-------------ACACTG--ATTC----------TGC-T...............................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTTTTTCTT-------GGGATGG----------------AT---AAAGCTAG............................................................................................................................................................................................................................................................................................................................26200.051000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................AA--AGGTT--------------------------GGGTCTGCAAGGGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATG-------------ACACTG--ATTC----------TGC-TAACCTC-TTT.....................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TG--ATTC----------TGC-TAACCTC-TTTGCTA.................................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCA...............................25200.051000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................TATTAGATCTTTGGCGT-G-CCGAA..................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAGCTAGCAATG-------------ACACTG--ATTC----------T...................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................GGTATTAGATCTTTGGCGT-G-C......................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-ACTAAT....................27200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................AAA--AGGTT--------------------------GGGTCTGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................TCTGCAAGGGTATTAGATCTTTGGC............................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCC...............................23200.051000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................TGAAA--AGGTT--------------------------GGGTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GGATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--..................................................................................................................................................................................................................................................................................................27200.051000000001000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------..........................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................G----------------AT---AAAGCTAGCAATG-------------ACAC......................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................ATTATGAAA--AGGTT--------------------------GGGTCTGCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------ACAC......................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................CTAGCAATG-------------ACACTG--ATTC----------TG..................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAAT........................................................................................................................................................................................................................................................................................................................19200.051000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................G--ATTC----------TGC-TAACCTC-TTTG....................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GGGATGG----------------AT---AAAGCTAGCAATG-------------ACAC......................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................T---AAAGCTAGCAATG-------------ACACT.....................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................TGAAA--AGGTT--------------------------GGGTCTGCAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................TATTAGATCTTTGGCGT-G-CCGAAGATAGC............................................................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCC..........................................................................................................................................................................................................................................................................................................................21200.051000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAG......................................18200.051000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................TTCTT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--ATT...............................................................................................................................................................................................................................................................................................36200.051000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--AT................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ATTC----------TGC-TAACCTC-TTTGCTAA................................................................................................................................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................TT--------------------------GGGTCTGCAAGGGTATTAGATC..................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCT...................................19200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTC................................24200.051000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGGCGT-G-CCGAAGATAGCCCTTCTTTCT..................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...................................TTCC-----C-------GGTACTTCTTAGATAGGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTCTTACCCTTATAC----TA21200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAAA........................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-ACTAA.....................27200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGCTAGCAATG-------------ACACTG--ATTC----------G...................................................................................................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TG-------------ACACTG--ATTC----------TGC-TAACCTC-TTTGC...................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CGAAGATAGCCCTTCTTTC...................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................G-CCGAAGATAGCCCTTCTTTCTCG................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CACTG--ATTC----------TGC-TAACCTC-TT......................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................TCTTTGGCGT-G-CCGAAGATAGC............................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................TGCAAGGGTATTAGATCTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................TAGATCTTTGGCGT-G-CCGAAGATAGC............................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................TTTTTCTT-------GGGATGG----------------AT---AAAGCTAGC...........................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTT-------GGGATGG----------------AT---AAAGCTAGCAA.........................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTTTCTT-------GGGATGG----------------AT---AAAGCTAGCAA.........................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................C----------TGC-TAACCTC-TTTGCTAATT..............................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------T.........................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................T-G-CCGAAGATAGCCCTTCTTTCTCGTTT.............................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................TTATGAAA--AGGTT--------------------------GGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCTTACCCTTATAC----TA20200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TCTTTGGCGT-G-CCGAAGATAG.............................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................ATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--A.................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GGATGG----------------AT---AAAGCTAGCAATG-------------ACACTG--A.................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTC................................19200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CAATG-------------ACACTG--ATTC----------TGC-TAACCTC-T.......................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTT-------GGGATGG----------------AT---AAAGCTAG............................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
................................................................ATAGGGGCAAAGCA----------------------------------CTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GATGG----------------AT---AAAGCTAGCAATG-------------AT........................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCT..............................23200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAA--AGGTT--------------------------GGGTCTGCAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-AC........................27200.051001000000000000000000000000000000000000000000000000000000000000
......TAT-------------------------TTTCC-----C-------GGTACTTCTTAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTTCTT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------..........................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TC----------TGC-TAACCTC-TTTGCTAATT..............................................................................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATG-------------ACACTG--ATTC----------TGC-TAACCTC-TTTGC...................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCT...................................22200.051000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGTCTGTCCTAAT-ACTAA.....................22200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATG-------------ACACTG--ATTC----------TGC-TAACCTC-T.......................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...TACTAT-------------------------TTTCC-----C-------GGTACTTCTTAGATAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCAATG-------------AC........................................................................................................................................................................................................................................................................................................26200.051000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATG-------------ACACTG--ATTC----------TGC-TAACCT..........................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................TTTTTCTT-------GGGATGG----------------AT---AAAGC...............................................................................................................................................................................................................................................................................................................................22200.051000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAGCTAGCAATG-------------ACACTG--ATTC----------....................................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TT-------GGGATGG----------------AT---AAAGCTAGCA..........................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCC...............................18200.051000000000000000000000000000000000000100000000000000000000000000
.................................................................TAGGGGCAAAGCA----------------------------------CTATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ACACTG--ATTC----------TGC-TAACCTC-T.......................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTCCAATCAACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTC........................................20200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCAGTCTGTCCTAAT-ACTAATTC..................28200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................G--ATTC----------TGC-TAACCTC-TTTGCG..................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
TTTTTATTT-------------------------T----------------------------------------------------------------------------------------TA----TTTTAGAATC--TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATAA--GTTT-----------TGAAAA-TTCT-GAA-----------------------------------------------------------------------------------------ACGAAATGT--------------ATAA-ACTAAGT-----------T------------------------------------------------------AATTTATTTAT------------------------------------------------TTCTTTAACGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAAGGGTATCTGAACTTCGGCTT-G-GCCATGTTAGCCGTTCTTTCGTGATTTCTATA-------TTGCTGA----------------TCAATA---------------TTACTTCA-------A--GGT---TTTCGA-----------------T-----------------------------------------------------------------------------------------GCGAGGTCA--------------ATG-----------------------------------------------------------------GAACTTAGCTGGATTTTTGAT-------------------------------------------------------TTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:05 AM