ID:

dan_3324

 Coordinate:

scaffold_13417:2813953-2814103 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.0 -12.7 -12.5

Flybase annnotation

intron [Dana\GF20497-in]; CDS [Dana\GF20497-cds]; exon [dana_GLEANR_2906:3]; intron [Dana\GF20497-in]

No Repeatable elements found

mature
  1. dan_3324  scaffold_13417:2814056-2814081 +
  2. scaffold_13417:2828415-2828440 +
  3. scaffold_13417:2835156-2835181 +
star
  1. scaffold_2197:425-451 +
  2. scaffold_12343:655-681 +
  3. scaffold_13417:2807043-2807069 +
  4. dan_3324  scaffold_13417:2814019-2814045 +
  5. scaffold_13417:2828378-2828404 +
  6. scaffold_13417:2835119-2835145 +

Sense Strand Reads

--################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGGAAATTGGAGAAGACGGAGGCGGGAATCAGGATCGGCAGGAATCTAAGGTAAGAGGTCAGTTCAGGAAGGAGAGCCGTAATAAATGGGCTTCTTCATTCCAGGACCGACTATACTCGCATCTCCGGGAGAAGAAGTCAGGCCGTTGAAATCAAGTTAGGCCTAGCGTGTTTTTTTTCTTTTTCTTGGAATAAAAATCTCTTACCTGGAAACAAACTCAACGTTTGTTTGCTTCGCGCGCGCTATCCCTT
********************************************************************************************************************..........(((((((((.((.(((((...............))))).))...)))))))))************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V055
head
 V039
embryo
 V105
male body
......................................................................................................................................................................................................................AACTCAACGTTTGTTTGCTTCGCG............. 24 0 1 1.00 1 1 0 0 0 0
..................................TCGGCAGGAATCTAAGGTAAGAGG................................................................................................................................................................................................. 24 0 13 0.69 9 7 2 0 0 0
............................................TCTAAGGTAAGAGGTCAGTTCAGG....................................................................................................................................................................................... 24 0 5 0.40 2 2 0 0 0 0
............................................TCTAAGGTAAGAGGTCAGTTCAG........................................................................................................................................................................................ 23 0 5 0.40 2 2 0 0 0 0
..................................TCGGCAGGAATCTAAGGTAAGAGGTC............................................................................................................................................................................................... 26 0 13 0.38 5 2 3 0 0 0
.........................................................................................................................................................AAGTTAGGCCTAGCGTGTTTTTTTTC........................................................................ 26 0 3 0.33 1 0 0 0 1 0
.................................ATCGGCAGGAATCTAAGGTAAGAGG................................................................................................................................................................................................. 25 0 13 0.31 4 4 0 0 0 0
.................................ATCGGCAGGAATCTAAGGTAAGA................................................................................................................................................................................................... 23 0 13 0.23 3 3 0 0 0 0
...............................................AAGGTAAGAGGTCAGTTCAGG....................................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
................................................................................................................................................GTTGAAATCAAGTTAGGCCTAGC.................................................................................... 23 0 5 0.20 1 0 1 0 0 0
.................................................................................................................................................TTGAAATCGAGTGAGGCCTAGCGTGT................................................................................ 26 2 5 0.20 1 1 0 0 0 0
.......................................................................GAGAGCCGTAGTCGATGGG................................................................................................................................................................. 19 3 20 0.20 4 4 0 0 0 0
..............................................TAAGGTAAGAGGTCAGTTCAGGAAG.................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
....................................................................................................................TCGCATCTCCGGGAGAAGAAGTCAGGC............................................................................................................ 27 0 6 0.17 1 1 0 0 0 0
...................................................................................................................CTCGCATCTCCGGGAGAAGAAGTCAG.............................................................................................................. 26 0 6 0.17 1 1 0 0 0 0
.........................................................................................................................TCTCCGGGAGAAGAAGTCAGGCC........................................................................................................... 23 0 6 0.17 1 0 1 0 0 0
...................................................................................................................CTCGCATCTCCGGGAGAAGAAGTCAGG............................................................................................................. 27 0 6 0.17 1 1 0 0 0 0
................................................................................................................................................GTTGAAATTAAGTTAGGCCTAGC.................................................................................... 23 1 6 0.17 1 1 0 0 0 0
..................................TCGGCAGGAATCTAAGGTAAGAGGT................................................................................................................................................................................................ 25 0 13 0.15 2 2 0 0 0 0
.................................ATCGGCAGGAATCTAAGGTAAGAG.................................................................................................................................................................................................. 24 0 13 0.15 2 2 0 0 0 0
..................................TCGGCAGGAATCTAAGGTAAGAG.................................................................................................................................................................................................. 23 0 13 0.15 2 2 0 0 0 0
.............................................................................................................................................GCCGTTGAAATCAAGTTAGGCCT....................................................................................... 23 0 7 0.14 1 1 0 0 0 0
.................................................................................................................................................................................................................AAACGAACTGACCGTTTGTTT..................... 21 3 9 0.11 1 0 0 1 0 0
........TGAGAAGACGGACGCGGG................................................................................................................................................................................................................................. 18 2 10 0.10 1 0 0 1 0 0
....................................................................................................................................................................................................GTCTCTTACCGGGAAACCAA................................... 20 3 10 0.10 1 0 0 1 0 0
........................................GGAATTTGAGGTTAGAGGT................................................................................................................................................................................................ 19 3 20 0.10 2 0 0 0 0 2
.................................................................................................................................AGAAGAATTCAGACCGTT........................................................................................................ 18 2 10 0.10 1 0 0 1 0 0
.....................................................................................................................................................................................................................AAACTCACCGAGTGTTTGCT.................. 20 3 12 0.08 1 0 0 1 0 0
................................GATCGGCAGGAATCTAAGGTAAGAGG................................................................................................................................................................................................. 26 0 13 0.08 1 1 0 0 0 0
....................................GGCAGGAATCTAAGGTAAGAGGT................................................................................................................................................................................................ 23 0 13 0.08 1 1 0 0 0 0
.................................AGCGGCAGGAATCTAAGGTAAGA................................................................................................................................................................................................... 23 1 13 0.08 1 0 1 0 0 0
..................................TCGGCAGGAATCTAAGGTAAGAGGC................................................................................................................................................................................................ 25 1 13 0.08 1 0 1 0 0 0
..................................TCGGTAGGAATCTAAGGTAAGAGG................................................................................................................................................................................................. 24 1 13 0.08 1 0 1 0 0 0
......................................CAGGAATCTAAGGTAAGAGGTC............................................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0
.............................CAGGATCGGCAGGAATCTAAGGTAAGAG.................................................................................................................................................................................................. 28 0 13 0.08 1 1 0 0 0 0
.................................ATCGGCAGGAATCTAAGGTAAG.................................................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0
.................................ATCGGCAGGAATCTAAGGTAAGAGGT................................................................................................................................................................................................ 26 0 13 0.08 1 1 0 0 0 0
....................................................................................................................................................................................................ATCGCTTACCGGGAAACCA.................................... 19 3 16 0.06 1 0 0 1 0 0
......................................................................................TTGGCTTCTTCATTCCAGGACC............................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................GTCTCTTCCCTGGAAAC...................................... 17 2 20 0.05 1 0 0 1 0 0
.......GGGAGAAGACGGAGGGAGGA................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 1 0 0
..................................................................................TGCTTGGGCTTCTTCATTCCAGGACC............................................................................................................................................... 26 3 20 0.05 1 0 1 0 0 0
...............................................AAGGGACAAGGTCAGTTCA......................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

TCCTTTAACCTCTTCTGCCTCCGCCCTTAGTCCTAGCCGTCCTTAGATTCCATTCTCCAGTCAAGTCCTTCCTCTCGGCATTATTTACCCGAAGAAGTAAGGTCCTGGCTGATATGAGCGTAGAGGCCCTCTTCTTCAGTCCGGCAACTTTAGTTCAATCCGGATCGCACAAAAAAAAGAAAAAGAACCTTATTTTTAGAGAATGGACCTTTGTTTGAGTTGCAAACAAACGAAGCGCGCGCGATAGGGAA
************************************************************************..........(((((((((.((.(((((...............))))).))...)))))))))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
..............................................................................................................................................GGCAACTTTGGTACCATCCGG........................................................................................ 21 3 8 15.13 121 118 3 0
.............................GTCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 25 0 14 1.29 18 11 6 1
...............................................................................................................................................GCAACTTTGGTACCATCCGG........................................................................................ 20 3 15 0.80 12 12 0 0
...............................CCTAGCCGTCCTTAGATTCCATTCT................................................................................................................................................................................................... 25 0 13 0.77 10 1 9 0
...............................CCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 23 0 14 0.64 9 1 8 0
..............................TCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 24 0 14 0.57 8 3 5 0
...................TCCGCCCTTAGTCCTAGCCGTCCTT............................................................................................................................................................................................................... 25 0 6 0.50 3 2 1 0
.............................................................................................................................GCCCTCTTCTTCAGTCCGGCAACTTT.................................................................................................... 26 0 6 0.50 3 2 1 0
.................................................CCATTCTCCAGTCAAGTCCTTCCTCT................................................................................................................................................................................ 26 0 5 0.40 2 1 1 0
..................................................................................................................................................ACTTTAGTTCAATCCGGATCGCACAA............................................................................... 26 0 5 0.40 2 2 0 0
..............................TCCTAGCCGTCCTTAGATTCCATTCT................................................................................................................................................................................................... 26 0 13 0.31 4 0 4 0
..........................................................................................................GGCTGATATGAGCGTAGAGGCCCTCTT...................................................................................................................... 27 0 4 0.25 1 1 0 0
..............................................................................................................................................GGCAACTTTGGTGCCATCCGG........................................................................................ 21 3 8 0.25 2 2 0 0
.......................................................................................................CCTGGCTGATATGAGCGTAGAGGCCCT......................................................................................................................... 27 0 4 0.25 1 1 0 0
................................CTAGCCGTCCTTAGATTCCATTCT................................................................................................................................................................................................... 24 0 13 0.23 3 1 2 0
..............................CCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 24 1 14 0.21 3 0 3 0
........................................................CCAGTCAAGTCCTTCCTCTCGGCGT.......................................................................................................................................................................... 25 1 5 0.20 1 0 1 0
................................................TCCATTCTCCAGTCAAGTCCTTCCT.................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0
.....................................................................................................................................CTTCAGTCCGGCAACTTTAGTTCAA............................................................................................. 25 0 5 0.20 1 0 1 0
................................................TCCATTCTCCAGTCAAGTCCTTCCTCT................................................................................................................................................................................ 27 0 5 0.20 1 1 0 0
................................................................................................................................................CAACTTTAGTTCAATCCGGATCGCAC................................................................................. 26 0 5 0.20 1 1 0 0
.....................................................................................................................................................................................................AGAGAATGGACCTTTGTTTGAGTTGC............................ 26 0 5 0.20 1 1 0 0
.............................................................................................................................GCCCTCTTCTTCAGTCCGGCAACTTTAGT................................................................................................. 29 0 5 0.20 1 1 0 0
........................................................CCAGTCAAGTCCTTCCTCTCGGCATT......................................................................................................................................................................... 26 0 5 0.20 1 0 1 0
.....................................................TCTCCAGTCAAGTCCTTCCTCTCGGCAT.......................................................................................................................................................................... 28 0 5 0.20 1 1 0 0
........................................................CCAGTCAAGTCCTTCCTCTCGGCAT.......................................................................................................................................................................... 25 0 5 0.20 1 1 0 0
.....................................................................................................................................................................................................AGAGAATGGACCTTTGTTTGAGTTGCA........................... 27 0 5 0.20 1 1 0 0
........................................CCTTAGATTCCATTCTCCAGTCAAGT......................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0
.....................CGCCCTTAGTCCTAGCCGTCCCTTG............................................................................................................................................................................................................. 25 2 6 0.17 1 0 1 0
...........................TAGTCCTAGCCGTCCTTAGATTCCAT...................................................................................................................................................................................................... 26 0 6 0.17 1 0 1 0
.....................CGCCCTTAGTCCTAGCCGTCCTTAGATT.......................................................................................................................................................................................................... 28 0 6 0.17 1 1 0 0
......................GCCCTTAGTCCTAGCCGTCCTTAGAT........................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0
.................CCTCCGCCCTTAGTCCTAGCCGTCCT................................................................................................................................................................................................................ 26 0 6 0.17 1 1 0 0
............................AGTCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0
....................CCGCCCTTAGTCCTAGCCGTCCTT............................................................................................................................................................................................................... 24 0 6 0.17 1 1 0 0
..............................................................................................................GATATGAGCGTAGAGGCCCTCTTCT.................................................................................................................... 25 0 6 0.17 1 1 0 0
...........................................................................................................................AGGCCCTCTTCTTCAGTCCGGCAA........................................................................................................ 24 0 6 0.17 1 1 0 0
...............TGCCTCCGCCCTTAGTCCTAGCCGTCC................................................................................................................................................................................................................. 27 0 6 0.17 1 1 0 0
........................CCTTAGTCCTAGCCGTCCTTAGAT........................................................................................................................................................................................................... 24 0 6 0.17 1 0 1 0
......................GCCCTTAGTCCTAGCCGTCCTTAGATTC......................................................................................................................................................................................................... 28 0 6 0.17 1 1 0 0
....................CCGCCCTTAGTCCTAGCAGTCCTTAG............................................................................................................................................................................................................. 26 1 6 0.17 1 1 0 0
..................CTCCGCCCTTAGTCCTAGCCGTCCT................................................................................................................................................................................................................ 25 0 6 0.17 1 1 0 0
...........................TAGTCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 27 0 6 0.17 1 1 0 0
...............................................................................................................................CCTCTTCTTCAGTCCGGCAACTTT.................................................................................................... 24 0 6 0.17 1 1 0 0
.............................GTCCTAGCCGTCCTTAGATTCCATTCT................................................................................................................................................................................................... 27 0 13 0.15 2 2 0 0
...............................CCTAGCCGTCCTTAGATTCCATTCTC.................................................................................................................................................................................................. 26 0 13 0.15 2 1 1 0
................................CTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 22 0 14 0.14 2 1 1 0
..........................................................................................................................................GTCCGGCAACTTTAGTTCAAT............................................................................................ 21 0 7 0.14 1 1 0 0
.................................................................................................................................................................GGATCGAAGAAAAAAAAGAA...................................................................... 20 2 10 0.10 1 0 1 0
.............................................................CAAGGCCTTCCACACGGCAT.......................................................................................................................................................................... 20 3 11 0.09 1 0 0 1
...........................................................................CGGCATTATTTACCCGAAGAAGTAAGGT.................................................................................................................................................... 28 0 12 0.08 1 0 1 0
...........................................................................................................................................................................AAAAAAAGAAAGAGAACC.............................................................. 18 1 12 0.08 1 0 0 1
................................CTAGCCGTCCTTAGATTCCATTCTC.................................................................................................................................................................................................. 25 0 13 0.08 1 1 0 0
..................................AGCCGTCCTTAGATTCCCTTCTCCAG............................................................................................................................................................................................... 26 1 13 0.08 1 1 0 0
................................CTAGCCGTCCTTAGATTCCACTCT................................................................................................................................................................................................... 24 1 13 0.08 1 0 1 0
...................................GCCGTCCTTAGATTCCATTCT................................................................................................................................................................................................... 21 0 13 0.08 1 1 0 0
.................................TAGCCGTCCTTAGATTACATTCTCCAG............................................................................................................................................................................................... 27 1 13 0.08 1 0 1 0
..............................TCCTAGCCGTCCTTAGATTCCATTCTC.................................................................................................................................................................................................. 27 0 13 0.08 1 0 1 0
............................TGTCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 26 1 14 0.07 1 1 0 0
................................CTAGCCGTCCTTAGATTTCATT..................................................................................................................................................................................................... 22 1 14 0.07 1 0 1 0
.............................TTCCTAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 25 1 14 0.07 1 0 1 0
.................................TAGCCGTCCTTAGATTCCATT..................................................................................................................................................................................................... 21 0 14 0.07 1 0 0 1
..............................TCCTAGCCGTCCTTAGATTCCAGT..................................................................................................................................................................................................... 24 1 14 0.07 1 0 1 0
.......................................................................................................................................................................CAGAAAAAAAAGAAAAAGA................................................................. 19 1 15 0.07 1 0 1 0
.................................................................................TATTTACCCGAAGAAGTAAGGTCCT................................................................................................................................................. 25 0 15 0.07 1 1 0 0
...................................................................................TTTACCCGAAGAAGTAAGGT.................................................................................................................................................... 20 0 16 0.06 1 0 1 0
...............................CCTAGCCGTCCTTAGATTCCAT...................................................................................................................................................................................................... 22 0 16 0.06 1 0 1 0
..............................TCCTAGCCGTCCTTAGATTCCAT...................................................................................................................................................................................................... 23 0 16 0.06 1 0 1 0
.............................GTCCTAGCCGTCCTTAGATTCCAT...................................................................................................................................................................................................... 24 0 16 0.06 1 1 0 0
...................................................................................................................................................................AGCGCACGAAAAAAAGAAA..................................................................... 19 2 16 0.06 1 0 1 0
................................CTAGCCGTCCTTAGATTCCAT...................................................................................................................................................................................................... 21 0 16 0.06 1 1 0 0
.....................................................................................................................................................................CGAACGAAAAAAAGAAAAAG.................................................................. 20 2 20 0.05 1 0 1 0
......................................................................................ACCCGAAGAAGTAAGGTCCT................................................................................................................................................. 20 0 20 0.05 1 1 0 0
.....................................................................................TACCCGAAGAAGTAAGGTCCT................................................................................................................................................. 21 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13417:2813903-2814153 + dan_3324 AGGAAATTGGAGAAG---------------ACGG--A--GGCGGGAATCAGGATCGGCAGGAATCTAAGGTAAGAGGTCA--GTTCAGGAAGGAGAGCCGTAATAAATGGGCTTCTTCATTCCAGGACCGACTATACTCGCATCTC-CGGGAGAAGA--AGTCAGGCCGTTGAAATCAAGTTAGGCCTAGCG--TGTTTTT----TTT---CTTTTTCTTGGAA-------------------------------------------------TAAAAATCTCTT--ACCTGGAAACAAA--CTCAACGTTTGTTTGCTTCGCGCGCGCT--ATCCCTT
droBip1 scf7180000396032:17788-18041 - AGGATAGTTCCAAG------AATCTCGAAGGAAG--A--GACGGGAGGCAGGATCGGCAGAAAATAAAGGTAAGAGGTCA--GTCCAGAAAGAAGAGCCATGACTAATGGATTGCTTCTTTCCAG-ACCGACCAGACCCGTTTATC-CTGACAAGGA--AGCCAGGCCTGAAAAGAAAAATTGGGCCTGGCG--AATATTTTGCGGTTTAGTTTTTTCTTT--------------------------------GCACCGCCAATTCCGGGAAGTGTGAACCTTGT--GCCAGG-------------------------------CAAGCC--GGCCTTT
droKik1 scf7180000301961:31559-31822 + CGGGGACGG-----------------------------------GAAGCCGGATCAAGATAATCCTAAGGTGAGTGGTCGTGGTC-CGGAGGTGAAGCCCTAACCAATGGCTATCA--TTTCCAGGCTCGACCAGACCCAGTCCTCGCAGGACGAGATTGGCCAGGTCAC-AAAATTG------ACCTGGCCCAATTTTCTTGCAATC---CTTTTTTCTGGAATATTCGAACGCCTTTTGGAATTTCTTTTTATCCCGA----------------------CTT--ATTGGGAAGCAGAAGAATAAGGCCTATGTGCA-CATTT--GCCATAACCCCT
droFic1 scf7180000453654:34626-34639 - AAAATATTAAGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491284:16074-16098 + AGGAAAATAAGAAAG---------------ATGA--A--CATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302386:125643-125643 + A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415864:149976-149989 - AAGAAAATGCGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2L_random_002:103470-103529 + TAGCGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCT----TTT---CTTTTTCTTTAAA-------------------------------------------------TAAGACCCCCTTCGAACTGAACACGAC--ATCGA--------------------------------
droPer2 scaffold_1400:4944-4946 + GGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004936:1372311-1372352 + AAAAATAGA--CAAAACAAAAATCTTAAAAGGAGTGAAACAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGGAAATTGGAGAAG---------------ACGG--A--GGCGGGAATCAGGATCGGCAGGAATCTAAGGTAAGAGGTCA--GTTCAGGAAGGAGAGCCGTAATAAATGGGCTTCTTCATTCCAGGACCGACTATACTCGCATCTC-CGGGAGAAGA--AGTCAGGCCGTTGAAATCAAGTTAGGCCTAGCG--TGTTTTT----TTT---CTTTTTCTTGGAA-------------------------------------------------TAAAAATCTCTT--ACCTGGAAACAAA--CTCAACGTTTGTTTGCTTCGCGCGCGCT--ATCCCTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................AA--CTCAACGTTTGTTTGCTTCGCG...............2411.001100000
.....................................................TCGGCAGGAATCTAAGGTAAGAGG......................................................................................................................................................................................................................................................................24130.699720000
...............................................................TCTAAGGTAAGAGGTCA--GTTCAGG..........................................................................................................................................................................................................................................................2450.402200000
...............................................................TCTAAGGTAAGAGGTCA--GTTCAG...........................................................................................................................................................................................................................................................2350.402200000
.....................................................TCGGCAGGAATCTAAGGTAAGAGGTC....................................................................................................................................................................................................................................................................26130.385230000
.................................................................................................................................................................................AAGTTAGGCCTAGCG--TGTTTTT----TTT---C...............................................................................................................................2630.331001000
....................................................ATCGGCAGGAATCTAAGGTAAGAGG......................................................................................................................................................................................................................................................................25130.314400000
....................................................ATCGGCAGGAATCTAAGGTAAGA........................................................................................................................................................................................................................................................................23130.233300000
..................................................................AAGGTAAGAGGTCA--GTTCAGG..........................................................................................................................................................................................................................................................2150.201100000
........................................................................................................................................................................GTTGAAATCAAGTTAGGCCTAGC....................................................................................................................................................2350.201010000
.................................................................TAAGGTAAGAGGTCA--GTTCAGGAAG.......................................................................................................................................................................................................................................................2550.201100000
.........................................................................................................................................TCGCATCTC-CGGGAGAAGA--AGTCAGGC............................................................................................................................................................................2760.171100000
........................................................................................................................................CTCGCATCTC-CGGGAGAAGA--AGTCAG..............................................................................................................................................................................2660.171100000
..............................................................................................................................................TCTC-CGGGAGAAGA--AGTCAGGCC...........................................................................................................................................................................2360.171010000
........................................................................................................................................CTCGCATCTC-CGGGAGAAGA--AGTCAGG.............................................................................................................................................................................2760.171100000
.....................................................TCGGCAGGAATCTAAGGTAAGAGGT.....................................................................................................................................................................................................................................................................25130.152200000
....................................................ATCGGCAGGAATCTAAGGTAAGAG.......................................................................................................................................................................................................................................................................24130.152200000
.....................................................TCGGCAGGAATCTAAGGTAAGAG.......................................................................................................................................................................................................................................................................23130.152200000
.....................................................................................................................................................................GCCGTTGAAATCAAGTTAGGCCT.......................................................................................................................................................2370.141100000
...................................................GATCGGCAGGAATCTAAGGTAAGAGG......................................................................................................................................................................................................................................................................26130.081100000
.......................................................GGCAGGAATCTAAGGTAAGAGGT.....................................................................................................................................................................................................................................................................23130.081100000
.....................................................TCGGCAGGAATCTAAGGTAAGAGGC.....................................................................................................................................................................................................................................................................25130.081010000
.........................................................CAGGAATCTAAGGTAAGAGGTC....................................................................................................................................................................................................................................................................22130.081100000
................................................CAGGATCGGCAGGAATCTAAGGTAAGAG.......................................................................................................................................................................................................................................................................28130.081100000
....................................................ATCGGCAGGAATCTAAGGTAAG.........................................................................................................................................................................................................................................................................22130.081100000
....................................................ATCGGCAGGAATCTAAGGTAAGAGGT.....................................................................................................................................................................................................................................................................26130.081100000
droBip1
AGGATAGTTCCAAG------AATCTCGAAGGAAG--A--GACGGGAGGCAGGATCGGCAGAAAATAAAGGTAAGAGGTCA--GTCCAGAAAGAAGAGCCATGACTAATGGATTGCTTCTTTCCAG-ACCGACCAGACCCGTTTATC-CTGACAAGGA--AGCCAGGCCTGAAAAGAAAAATTGGGCCTGGCG--AATATTTTGCGGTTTAGTTTTTTCTTT--------------------------------GCACCGCCAATTCCGGGAAGTGTGAACCTTGT--GCCAGG-------------------------------CAAGCC--GGCCTTTSizeHit CountTotal NormTotal
No Reads
droKik1
CGGGGACGG-----------------------------------GAAGCCGGATCAAGATAATCCTAAGGTGAGTGGTCGTGGTC-CGGAGGTGAAGCCCTAACCAATGGCTATCA--TTTCCAGGCTCGACCAGACCCAGTCCTCGCAGGACGAGATTGGCCAGGTCAC-AAAATTG------ACCTGGCCCAATTTTCTTGCAATC---CTTTTTTCTGGAATATTCGAACGCCTTTTGGAATTTCTTTTTATCCCGA----------------------CTT--ATTGGGAAGCAGAAGAATAAGGCCTATGTGCA-CATTT--GCCATAACCCCTSizeHit CountTotal NormTotal
No Reads
droFic1
AAAATATTAAGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGGAAAATAAGAAAG---------------ATGA--A--CATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGAAAATGCGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
TAGCGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCT----TTT---CTTTTTCTTTAAA-------------------------------------------------TAAGACCCCCTTCGAACTGAACACGAC--ATCGA--------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................TTTCTTTAAA-------------------------------------------------TAAGACCCCCTTCGAA..................................................2670.71500000000005
............................................................................................................................................................................................................................TAAA-------------------------------------------------TAAGACCCCCTTCGAACTGAACA...........................................2760.67404000000000
.................................................................................................................................................................................................................................................................................TAAGACCCCCTTCGAACTGAACACGA........................................2660.50301000000002
..............................................................................................................................................................................................................TT---CTTTTTCTTTAAA-------------------------------------------------TAAGACCCCCT.......................................................2680.50404000000000
.................................................................................................................................................................................................................................................................................TAAGACCCCCTTCGAACTGAACACGAC--A....................................2860.50303000000000
.......................................................................................................................................................................................................................TTCTTTAAA-------------------------------------------------TAAGACCCCCTTCGAAC.................................................2670.43303000000000
.................................................................................................................................................................................................................................................................................TAAGACCCCCTTCGAACTGAACACGAC--.....................................2760.33201100000000
.....................................................................................................................................................................................................TCCT----TTT---CTTTTTCTTTAAA-------------------------------------------------TAAGACCC..........................................................2880.25202000000000
............................................................................................................................................................................................................................................................................................TCGAACTGAACACGAC--AT...................................1890.22200000000002
.....................................................................................................................................................................................................TCCT----TTT---CTTTTTCTTTAAA-------------------------------------------------TAAGACC...........................................................27110.18201100000000
.............................................................................................................................................................................................................................AAA-------------------------------------------------TAAGACCCCCTTCGAACTGAACACG.........................................2860.17101000000000
......................................................................................................................................................................................................................................................................................CCCCCTTCGAACTGAACACGAC--ATCGA--------------------------------2760.17101000000000
........................................................................................................................................................................................................................................................................................CCCTTCGAACTGAACACGAC--ATCGA--------------------------------2560.17101000000000
............................................................................................................................................................................................................................TAAA-------------------------------------------------TAAGACCCCCTTCGAACTGAACAC..........................................2860.17101000000000
............................................................................................................................................................................................................................TAAA-------------------------------------------------TAAGACCCCCTTCGAACTGAA.............................................2560.17101000000000
..........................................................................................................................................................................................................................TTTAAA-------------------------------------------------TAAGACCCCCTTCGAACTGAACA...........................................2960.17101000000000
..............................................................................................................................................................................................................................AA-------------------------------------------------TAAGACCCCCTTCGAACTGAACACG.........................................2760.17101000000000
........................................................................................................................................................................................................................TCTTTAAA-------------------------------------------------TAAGACCCCCTTCGAAC.................................................2570.14100100000000
............................................................................................................................................................................................................................TAAA-------------------------------------------------TAAGACCCCCTTCGAAA.................................................2170.14101000000000
.............................................................................................................................................................................................................................AAA-------------------------------------------------TAAGACCCCCTTCGAAC.................................................2070.14101000000000
..............................................................................................................................................................................................................TT---CTTTTTCTTTAAA-------------------------------------------------TAAGACCCCCTT......................................................2780.13101000000000
........................................................................................................................................................................................................T----TTT---CTTTTTCTTTAAA-------------------------------------------------TAAGACCCCCC.......................................................2890.11100100000000
............................................................................................................................................................................................................................................................................................TCGAACTGAACACGA........................................1590.11100000000001
..............................................................................................................................................................................................................TT---CTTTTTCTTTAAA-------------------------------------------------TAAGACC...........................................................22120.08101000000000
......AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCT----TTT---CTTTTTCTT.......................................................................................................................18130.08101000000000
droPer2
GGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AAAAATAGA--CAAAACAAAAATCTTAAAAGGAGTGAAACAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 07:03 AM