ID:

dan_3214

 Coordinate:

scaffold_13340:21522213-21522363 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.1 -7.7

Flybase annnotation

exon [dana_GLEANR_17440:4]; CDS [Dana\GF16168-cds]; intron [Dana\GF16168-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCAGTATACTCGGGGTGACTACTTCGTTAAATGAGAATGCATGACGAGTTGAATATCGTGTGTGCTACCTGTTGCTCTTCCTGACCACCATCTCTTACAATCGCTTTCCCGTCTTGTCTCACGATATTCAGCTCCTCTGTATTATCAACACGCCGAACAGCGAGCGCTTGAACGGTTGTATAAGACAATGTTTAACCACAGGACCACACGCAGCCCTCCAATGGAAGTCATCGGCCGCCAAGCTCTTCCTT
****************************************************************************************************************..............((((((((..((((....((........)))))).))))...))))...**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 V106
head
 V055
head
..........................................................................................................................................................GAACAGCGAGCGCTTGAACGG............................................................................ 21 0 1 4.00 4 2 2 0 0
................................................................................................................CTTGTCTCACGATATTCAGCT...................................................................................................................... 21 0 1 2.00 2 2 0 0 0
......................................GCATGACGAGTTGAATGTCGT................................................................................................................................................................................................ 21 1 1 2.00 2 0 0 2 0
......................................................................................................................TCACGATATTCAGCTCCTCTG................................................................................................................ 21 0 1 1.00 1 1 0 0 0
................................................................CTACCTGTTGCTCTTCCTGACC..................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................CCACGGGACCACGCGCAGCCC................................... 21 2 1 1.00 1 1 0 0 0
..................................................GAATATCGTGTGTGCTACCTG.................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................TTAACCACAGGACCACACGCA....................................... 21 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................AACAGCGAGCGCTTGAACGG............................................................................ 20 0 1 1.00 1 1 0 0 0
..................................................................ACCTGTTGCTCTTCCTGACCA.................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.......ACTCGGGGTGATTACGTCG................................................................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 1
......................................................GTCGTGTGTGCTGCCTGTTG................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0
.......ACTCGGGGTGACTACTTCGT................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0
...............................................................................................TACAATCGCTTTCCCGTCTTG....................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
..............................................................................................TTACAATCGCTTTCCCGTCTTG....................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
........................................................................................................................................................CCGAACAGCGAGCGCTTGA................................................................................ 19 0 1 1.00 1 1 0 0 0
....................................................ATATCGTGTGTGCTACCTGTT.................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0
............................AAATGAGAATGCATGACGAGT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................CCACAGGACCACACGCAGCCC................................... 21 0 1 1.00 1 1 0 0 0
....................................................ATGTCGTGTGTGCTACCTGTT.................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................CGCAGCCCTCCAATGGAAG........................ 19 0 1 1.00 1 1 0 0 0
..................................................................................................................TGTCTCACGATATTCAGCTCC.................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................ATATCGTGTGTGCTACCTGTTG................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0
..............................ATGAGAATGCATGACGAGTTG........................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................AGGACAGTGTTTAACCACAGG................................................. 21 2 1 1.00 1 1 0 0 0
.................................................................TGCCTGTTGCTCTTCCTGACC..................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
........................................................................................CATATCTGACACTCGCTTTC............................................................................................................................................... 20 3 20 0.60 12 10 2 0 0
..................CTGCTTCGTTAACTGGGAATG.................................................................................................................................................................................................................... 21 3 3 0.33 1 0 1 0 0
..........................................................TGTGTGCTAGCTCTTGCACT............................................................................................................................................................................. 20 3 10 0.10 1 0 0 1 0
.........................................................................................ATATCTTACACTCGCTTTC............................................................................................................................................... 19 2 20 0.05 1 1 0 0 0
.....................................................................................................................................................ATTCCGAACAGCGAGC...................................................................................... 16 2 20 0.05 1 0 0 0 1
.................................................................................................................................................................GAGGGCTTGAACGGCTGAA....................................................................... 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

AGTCATATGAGCCCCACTGATGAAGCAATTTACTCTTACGTACTGCTCAACTTATAGCACACACGATGGACAACGAGAAGGACTGGTGGTAGAGAATGTTAGCGAAAGGGCAGAACAGAGTGCTATAAGTCGAGGAGACATAATAGTTGTGCGGCTTGTCGCTCGCGAACTTGCCAACATATTCTGTTACAAATTGGTGTCCTGGTGTGCGTCGGGAGGTTACCTTCAGTAGCCGGCGGTTCGAGAAGGAA
****************************************************************************..............((((((((..((((....((........)))))).))))...))))...**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 V105
male body		 V055
head
 V039
embryo
...................................................................AGACAACGAGAAGGACTGGTGG.................................................................................................................................................................. 22 1 1 3.00 3 0 3 0 0 0
.............................................................................................................................................................GTCGCTCGCGAACTTGCCAAC......................................................................... 21 0 1 3.00 3 2 1 0 0 0
...........................................................................AGAAGGACTGGTGGTAGAGAA........................................................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0
.........................................................................................................................................................................................................CTGGTGTGCGTCGGGAGGTTA............................. 21 0 1 2.00 2 0 2 0 0 0
...........................................................CACACGATGGACAACGAGAAG........................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0
............................................................................................................................................................................................................GTGTGCGTCGGGAGGTTACCT.......................... 21 0 1 2.00 2 0 0 0 2 0
.....................................................................................................................................................................................................................................TAGCCGGCGGTTCGAGGAGGA. 21 1 1 1.00 1 1 0 0 0 0
............................................................................................................GGCAGAACAGAGTGCTATAAG.......................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.........................................................................................................................................................................................................GTGGTGTGCGTCGGGAGGTTA............................. 21 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................TGCGTCGGGAGGTTACCTTCA....................... 21 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................GCGAACTTGCCAACATATT.................................................................... 19 0 1 1.00 1 0 0 1 0 0
.......................................................................AACGAGAAGGACTGGTGGTAG............................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................CGAGGAGACATAATAGTTGTGC................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
.....................................................ATAGCGCACACGATGGACAAC................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................GCGGCTTGTCGCTCGCGAACT................................................................................ 21 0 1 1.00 1 0 1 0 0 0
........................................................GCACACACGATGGTCAAGGAAA............................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 1 0
.......................................................................................................................................................CGGCTTGTCGCTCGCGGGCTT............................................................................... 21 2 1 1.00 1 1 0 0 0 0
................................CTCTTACGTACTGCTCAACTT...................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
..................................................................................................................................................................................................................GTCGGGAGGTTACCTTCAGTA.................... 21 0 1 1.00 1 1 0 0 0 0
....................................TACGTACTGCTCAACTTATAG.................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
........................................................................................................................TGCTATAAGTCGAGGAGACAT.............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................CGAGGAGACATAATAGTTGTG.................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................................................................AACTTGCCAACATATTCTGT................................................................ 20 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................ATTGGTGTCCTGGTGTGCGTC...................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................TGTGCGGCTTGTCGCTCGCGA................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................ACGATGGACAACGAGAAGGAC........................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................GAGGAGACATAATAGTTGTG.................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
...............................................................CGATGGACAACGAGAAGGAC........................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
....................................................................................................AGCGAAAGGGCAGAACAGAG................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................GCTATAAGCCGAGGAGACGT.............................................................................................................. 20 2 1 1.00 1 0 1 0 0 0
...........................................................................................................GGGCAGAACAGAGTGCTATAA........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................TTACTCTTACGTACTGCTCAA......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................TTGTCGCTCGCGAACTTGCCA........................................................................... 21 0 1 1.00 1 0 1 0 0 0
............................................................................................AGACTGTTAGCGAAACGGGA........................................................................................................................................... 20 3 10 0.20 2 0 0 0 2 0
......................................................................CAAGGGGAAGGACGGGTGGTA................................................................................................................................................................ 21 3 5 0.20 1 0 1 0 0 0
......................................................................................................................................................................GAACTTGACAACATATTGCG................................................................. 20 3 9 0.11 1 0 0 0 0 1
......................................................................................GGGTAGAGAATGTTAGT.................................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0
......................................CCGCCTGCTCAACTTATAG.................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:21522163-21522413 - dan_3214 TCAGTATACTCGGGGTGACTACTTC---------GTTAA-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TA--------------------------------------------------CC-TGTTGCTC-TT-CC--------------TG---------------------AC------C--------------------------ACCATC--TCTTA----CAATCGCTTTCCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACACGCCGAACAGCGAGCGCTTGAACGGTTGTATAAGACAATGTTTAACCACAGGACCACACGCAGCCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droBip1 scf7180000396413:1016911-1017163 + TCAATATACTCGAGGTGCCTACTTC---------GTTAA-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC-TTTTGCTA-TT-CC--------------TG---------------------AC------CTT------------------AA------CATC--TCTTA----CAATCGCTTTCCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACGCGCCCAACAGCGAGCGCTTGAACGGTTGTATAAGACAATGTTTAACCACAGGACCACACGCAGCCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droKik1 scf7180000302313:478439-478708 + TAAATTCTCCTGGACTG--------AGTGCTCCCCTTCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGCTT-TC-CC------CG---ATCCG---------------------ACCCCAAACTG------------------ACCCGATCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTTGT----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACCACGAGCGTTCGAACGGTTCTATAAGACAATGTTTAACCACAGGACCACATGCAACACTCCAATGGAAGTCTTCGGCCGCCAAG---CTCTTCCTT
droFic1 scf7180000454106:518771-519033 + TC----CCCTTGGAGAT--------TG--CTCATCTCCC-ATGACT---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGCTT-TT-TTTGGACTCG---ACCTG---------------------AC------CTG------------------ACCTGATCCAAC--TCTTA----CAATTGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCTCACGCAACCGTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droEle1 scf7180000491212:1777561-1777821 + TCATTATCCTTGAAGTG--------AGTGCTC--CTCCC-ATAAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGCTT-TT-AC------CG---ACCTG---------------------AC------CTG------------------ACCTGACCCAAA--ACTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCAACGGCCGCCAAG---CTCTTCCTT
droRho1 scf7180000779995:17087-17347 - TCATTTCCCTTGGAGTG--------ATTGCTC--CTCCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGTTT-TT-AC------CG---ACCCG---------------------AC------CTG------------------ACTTGACCAAAC--TATTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCACCTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCAACGGCCGCCAAG---CTCTTCCTT
droBia1 scf7180000302402:6747906-6748164 - TCATTCCCCTTGGAGTG--------AG--CTC--ATCCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TA--------------------------------------------------CC---TTGCTT-TT-AC------CG---ACCTG---------------------AC------CTG------------------ACCTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCCACCCTCCAATGGAAGTCATCGGGCGCCAAG---CTCTTCCTT
droTak1 scf7180000415711:1796388-1796593 - T------------------------------------------------------GACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---CTGCTT-TTTAC------CG---AACTG---------------------AC------------------------------------------CTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCTCATGCAACCCTCCAATGGAAGTCATCGGGCGCCAAG---CTCTTCCTT
droEug1 scf7180000409490:657403-657655 + TCAATACCCTTGAAGTG--------AG--CTT--TCCCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TT-AC------CG-----------------------------AC------CTG------------------ACCTGACCCAAC--TCTTA----CAATCACTTTT-CGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
dm3 chr3R:4063855-4064117 - TCATTCCCCTTGGAGTA--------AG--CTT--TTCCCACTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-ACCG---TCG---TCCTT---------------------AC------CTG------------------AACTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCATACCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droSim2 3r:16902962-16903222 + dsi_2536 TCATTCCCCTTAAAGTA--------AGCTTTT--TCCCA-CTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-AC------CG---TCCTC---------------------AC------CTG------------------AACTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droSec2 scaffold_0:17764815-17765075 + TCATTCCCCTTAAAGTA--------AGCTTTT--TCCCA-CTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---GTGCTT-TA-AC------CG---TCCTC---------------------AC------CTG------------------AACTGACCAAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droYak3 3R:8139608-8139867 - TTATTCCCCTTGGAGTA--------AG--CTT--TTTTCACTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-GC------CG---TCCTG---------------------AC------CTG------------------ACCTGACCAAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCATCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
droEre2 scaffold_4770:17510192-17510451 + TCAATTCCCTTGGAGTA--------AG--CTT--TTCCCACTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-AC------CG---TCCCA---------------------AT------CTG------------------ACCTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCATCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTT
dp5 2:13003552-13003776 + TCG--------------------------------TCCA-ATGAAA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CT---TTGTTCATT-CT--------------TG---------------------T---------------------------------ACCAAA----CTTA----CAATCGCTTTCCCGTC-----TTGTT----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACGCACCAAACAGCGAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACCTCACGCAGCCCTCCAATGGAAATCTTCGGCCGCCAAG---CTCTTCCTT
droPer2 scaffold_0:7452473-7452697 - TCG--------------------------------TCCA-ATGAAA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CT---TTGTTCATT-CT--------------TG---------------------T---------------------------------ACCAAA----CTTA----CAATCGCTTTCCCGTC-----TTGTT----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACGCACCAAACAGCGAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACCTCACGCAGCCCTCCAATGGAAATCTTCGGCCGCCAAG---CTCTTCCTT
droWil2 scf2_1100000004943:15438325-15438599 + TA-----CCTTG-----------------------------TAAGAATGATGCATGACGAGTTGAATATCGTGTGTGCGTGCGAGTTCGGGTTTG--------------------------------------------------CC---T----------C------CGAATT--------------------------C------CTA------------------ATGTAAACAAAAGATCTCAATATCAATC-----TCTATC-----TTG-TCTGTCTAATTTTCCTCCTCCTCCTCCTCCTCACGATATTCAGCTCCTCTGTATTATCAACACGCCGAACAGCGAACGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACCACATACA---CTCCAGTGGAAATCTTCGGCCGCCAAGCAGCTCTTCCTT
droVir3 scaffold_13047:10093247-10093394 - TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTCTCACT----------------------------TTCACGATATTCAGCTCCTTTGTATTATCAACGCGCCCAACTCGCAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACAACACACAGCCTTACAGTGGAAGTCATCGGCCGCTAAG---CTCTTCCTT
droMoj3 scaffold_6540:9259220-9259547 + --------------GTGATTGGTCC---------CTTGT-ATTTGA---ATGCATGGCGAGTTGAATATCGTGTCTGC---------------TAGAGCTGGAAAACCCAATTGGCAACCGATCCATTTTGAGATGAAGGAGTAGCTCTGTTGATT-TT-CC------AG---CTCTGGTTGTTAGCTATGTTAGTTGAATCGCAACGCAACGCAATGAAAATGTTCTCCCTGTCT------------------------------CTTGTCTTACT----------------------------TTCACGATATTCAGCTCCTTTGTATTATCAACGCGCCCAACTCGCAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACAACATACATCATTACAATGGAAGTCTTCGGCCGCTAAG---CTCTTCCTT
droGri2 scaffold_14906:7368288-7368434 + TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGTCTAC-T----------------------------TTCACGATATTCAGCTCCTTTGTATTATCAACGCGCCCAACTCGCAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACAACACACAGCCCTACAGTGGAAGTCTTCGGCCGCTAAG---CTCTTCCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TCAGTATACTCGGGGTGACTACTTC---------GTTAA-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TA--------------------------------------------------CC-TGTTGCTC-TT-CC--------------TG---------------------AC------C--------------------------ACCATC--TCTTA----CAATCGCTTTCCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACACGCCGAACAGCGAGCGCTTGAACGGTTGTATAAGACAATGTTTAACCACAGGACCACACGCAGCCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................GAACAGCGAGCGCTTGAACGG...............................................................................2114.004200020
..........................................................................................................................................................................................................................................................................C-----TTG-T----------------------------CTCACGATATTCAGCT.........................................................................................................................2112.002200000
..................................................................................................................................................................................................................................................................................................................TCACGATATTCAGCTCCTCTG...................................................................................................................2111.001100000
.............................................................................C---------------TA--------------------------------------------------CC-TGTTGCTC-TT-CC--------------TG---------------------AC------C--------------------------................................................................................................................................................................................................................2211.001100000
...............................................................GAATATCGTGTGTGC---------------TA--------------------------------------------------CC-TG....................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................TTAACCACAGGACCACACGCA..........................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................AACAGCGAGCGCTTGAACGG...............................................................................2011.001100000
..............................................................................................A--------------------------------------------------CC-TGTTGCTC-TT-CC--------------TG---------------------AC------C--------------------------A...............................................................................................................................................................................................................2111.001100000
.......ACTCGGGGTGACTACTTC---------GT......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................TA----CAATCGCTTTCCCGTC-----TTG-......................................................................................................................................................................2111.001000010
....................................................................................................................................................................................................................................................TTA----CAATCGCTTTCCCGTC-----TTG-......................................................................................................................................................................2211.001000010
....................................................................................................................................................................................................................................................................................................................................................CCGAACAGCGAGCGCTTGA...................................................................................1911.001100000
.................................................................ATATCGTGTGTGC---------------TA--------------------------------------------------CC-TGTT..................................................................................................................................................................................................................................................................................................2111.001000010
.....................................AA-ATGAGA---ATGCATGACGAGT............................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................CCACAGGACCACACGCAGCCC......................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCCCTCCAATGGAAG...........................1911.001100000
.................................................................................................................................................................................................................................................................................TG-T----------------------------CTCACGATATTCAGCTCC.......................................................................................................................2111.001100000
.................................................................ATATCGTGTGTGC---------------TA--------------------------------------------------CC-TGTTG.................................................................................................................................................................................................................................................................................................2211.001100000
........................................ATGAGA---ATGCATGACGAGTTG..........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
TCAATATACTCGAGGTGCCTACTTC---------GTTAA-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC-TTTTGCTA-TT-CC--------------TG---------------------AC------CTT------------------AA------CATC--TCTTA----CAATCGCTTTCCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACGCGCCCAACAGCGAGCGCTTGAACGGTTGTATAAGACAATGTTTAACCACAGGACCACACGCAGCCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droKik1
TAAATTCTCCTGGACTG--------AGTGCTCCCCTTCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGCTT-TC-CC------CG---ATCCG---------------------ACCCCAAACTG------------------ACCCGATCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTTGT----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACCACGAGCGTTCGAACGGTTCTATAAGACAATGTTTAACCACAGGACCACATGCAACACTCCAATGGAAGTCTTCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droFic1
TC----CCCTTGGAGAT--------TG--CTCATCTCCC-ATGACT---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGCTT-TT-TTTGGACTCG---ACCTG---------------------AC------CTG------------------ACCTGATCCAAC--TCTTA----CAATTGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCTCACGCAACCGTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droEle1
TCATTATCCTTGAAGTG--------AGTGCTC--CTCCC-ATAAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGCTT-TT-AC------CG---ACCTG---------------------AC------CTG------------------ACCTGACCCAAA--ACTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCAACGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droRho1
TCATTTCCCTTGGAGTG--------ATTGCTC--CTCCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CC---TTGTTT-TT-AC------CG---ACCCG---------------------AC------CTG------------------ACTTGACCAAAC--TATTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCACCTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCAACGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droBia1
TCATTCCCCTTGGAGTG--------AG--CTC--ATCCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TA--------------------------------------------------CC---TTGCTT-TT-AC------CG---ACCTG---------------------AC------CTG------------------ACCTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCCACCCTCCAATGGAAGTCATCGGGCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------GACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---CTGCTT-TTTAC------CG---AACTG---------------------AC------------------------------------------CTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCTCATGCAACCCTCCAATGGAAGTCATCGGGCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
droEug1
TCAATACCCTTGAAGTG--------AG--CTT--TCCCC-ATGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TT-AC------CG-----------------------------AC------CTG------------------ACCTGACCCAAC--TCTTA----CAATCACTTTT-CGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATTATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotal
No Reads
dm3
TCATTCCCCTTGGAGTA--------AG--CTT--TTCCCACTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-ACCG---TCG---TCCTT---------------------AC------CTG------------------AACTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCATACCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................TCACGATATTCAGCTCCACTG...................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACGCATACCTCCAATGGAAGTC.........................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACGAGCGTTCGAATGGTTCTATAAGAC....................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGCATAATAAACGCGCCAAACAACGAGC.........................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCCAAACAACGAGCGTTCGAATGG...............................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ACAACGAGCGTTCGAATGGTT.............................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TCCAATGGAAGTCATCGGCCG.................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTC---------------TG--------------------------------------------------CC---TTGCTT-TA-ACCG---TC.................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................CGAGTTGAATATCGTGTGTTC---------------.............................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000100000000
...............................................................................................................................................................................................................................................C--TCTTA----CAATCGCTTTTCCGT................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCACACGCATACCTCC...................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TGGTTCTATAAGACAATGTT..............................................................2012.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GCATGACGAGTTGAATATCGT..................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AACAACGAGCGTTCGAATGGT..............................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
......................................................TGACGAGTTGAATATCGTGTG...............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AATGTTTAACCACAGGACCACACGC...........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CTTA----CAATCGCTTTTCCGTC-----T.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATACCTCCAATGGAAGTCATCGGCCGC................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GAGTTGAATATCGTGTGTTC---------------T............................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ATGGTTCTATAAGACAATGTTTA............................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCCAATGGAAGTCATCGGCCGCCA..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AACAACGAGCGTTCGAATG................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CACAGGACCACACGCATACCTCCAATGG..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................G--------------------------------------------------CC---TTGCTT-TA-ACCG---TCG---TCC..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................................TTCGAATGGTTCTATAAGA.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CAACGAGCGTTCGAATGGTTCT...........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTG.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AACCACAGGACCACACGCATACCTCC...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAGTCATCGGCCGCCA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................C-----TTG-T----------------------------CTCACGATATTCAG...........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATCGGCCGCCAAG---CT.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGACGAGTTGAATATCGTGTGTTC---------------.............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CGTTCGAATGGTTCTATAAGA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................................................................................TG--------------------------------------------------CC---TTGCTT-TA-ACCG---TCG---TCCTT---------------------AC------CT.........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAACCACAGGACCACACGCATACCTC....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ATGCATGACGAGTTGAATATC....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CGCCAAACAACGAGCGTTCGA...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGGCCGCCAAG---CTCTTCC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TAAACGCGCCAAACAACGAGC.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATAAGACAATGTTTAACCACAGGAC..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CGTC-----TTG-T----------------------------CTCACGATATTCAG...........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AAACAACGAGCGTTCGAATGGT..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................A---ATGCATGACGAGTTGAATA......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CCCCTTGGAGTA--------AG--CTT--TTCC....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............AGTA--------AG--CTT--TTCCCACTGAGA---.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCAATGGAAGTCATCGGCCGCCAAG---C........3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................C---TTGCTT-TA-ACCG---TCG---TCCTT---------------------...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTC---------------TG--------------------------------------------------CC---TTGCTT-TA-ACCG---T..................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................TT-TA-ACCG---TCG---TCCTT---------------------AC------CTG------------------......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCGAATGGTTCTATAAGACA...................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TTGCTT-TA-ACCG---TCG---TCCTT---------------------A..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACGAGCGTTCGAATGGTTCTATAAGA.....................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCCAATGGAAGTCATCGGCCGC................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CAACGAGCGTTCGAATGGTTC............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ACGATATTCAGCTCCACTGCA.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GAGCGTTCGAATGGTTCTATAAGAC....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGGAAGTCATCGGCCGC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTGAATATCGTGTGTTC---------------TG--------------------------------------------------C........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGTCATCGGCCGCCAAG---CT.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CTGAGA---ATGCATGACGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACGCATACCTCCAATGGAAGT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCGAATGGTTCTATAAGACAATGTT..............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CAAC--TCTTA----CAATCGCTTTTCC..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TAAGACAATGTTTAACCACAGG....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........CTTGGAGTA--------AG--CTT--TTCC....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGTTGAATATCGTGTGTTC---------------.............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CATACCTCCAATGGAAGTC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTC---------------TG--------------------------------------------------CC---TTGCTT-TA-ACCG---TCG---TCCT.........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................AGCTCCACTGCATAATAAACG........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........TGGAGTA--------AG--CTT--TTCCCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATACCTCCAATGGAAGTCATCGG....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CACTGAGA---ATGCATGACGAGT............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................TCCCACTGAGA---ATGCATGACG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................CAAACAACGAGCGTTCGAATG................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCAATGGAAGTCATCGGCCGC................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................ATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................TATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCT...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................TTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCAATGGAAGTCATCGGT...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................GCATGACGAGTTGAATATCG...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CAACGAGCGTTCGAATGGTTCTATAAGAC....................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GCTTTTCCGTC-----TTG-T----------------------------CTCACG...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................TCTTA----CAATCGCTTTTCCGTC-----..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAACCACAGGACCACACGCATACCTCCAA.................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACGAGCGTTCGAATGGTT.............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCCGCCAAG---CTCTTCCTT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TCTATAAGACAATGTTTAACCACAGGAC..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-ACC.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAATGGAAGTCATCGGC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................T--TTCCCACTGAGA---ATGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CGCCAAACAACGAGCGTTCGAATGG...............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................GTTGAATATCGTGTGTTC---------------TG--------------------------------------------------C........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droSim2
TCATTCCCCTTAAAGTA--------AGCTTTT--TCCCA-CTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-AC------CG---TCCTC---------------------AC------CTG------------------AACTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................TT-TA-AC------CG---TCCTC---------------------AC------CTG------------------......................................................................................................................................................................................................................1812.00220000000000000000
...................................................................................................................................................................................................................................................................................................................CACGATATTCAGCTCCACTGC..................................................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................................................................TTTCCGTC-----TTG-T----------------------------CTCACGATATTCA............................................................................................................................2511.00100000000100000000
droSec2
TCATTCCCCTTAAAGTA--------AGCTTTT--TCCCA-CTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---GTGCTT-TA-AC------CG---TCCTC---------------------AC------CTG------------------AACTGACCAAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCCTCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................AACCCTCCAATGGAAGTCA........................1911.0010010
................................................................................................................................................................................TC---------------------AC------CTG------------------AACTGACCAAAC--TC......................................................................................................................................................................................................2111.0011000
.......................................................GACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------C........................................................................................................................................................................................................................................................................................................2611.0010100
droYak3
TTATTCCCCTTGGAGTA--------AG--CTT--TTTTCACTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-GC------CG---TCCTG---------------------AC------CTG------------------ACCTGACCAAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCATCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................AACCATCCAATGGAAGTCATT......................2113.00300000000003
....................................................................................................................................................................................................................................................................................................................................................................................................GGACCACACGCAACCATCCAATGGAAG...........................2711.00100100000000
..................................................................................................................................................................................................................................................TCTTA----CAATCGCTTTTCCGTC-----..........................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................C------CG---TCCTG---------------------AC------CTG------------------ACCTGACC..............................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATAAGACAATGTTTAACCACAG.....................................................2211.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................ACGAGCGTTCGAATGGTTC............................................................................1911.00100000010000
..............................................................................................................................................................................................................................................................TCGCTTTTCCGTC-----TTG-T----------------------------CTCACG...................................................................................................................................2311.00110000000000
.................................................................ATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGC................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................AACAACGAGCGTTCGAATGGT..............................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GCCAAACAACGAGCGTTCGAAT.................................................................................2211.00101000000000
droEre2
TCAATTCCCTTGGAGTA--------AG--CTT--TTCCCACTGAGA---ATGCATGACGAGTTGAATATCGTGTGTTC---------------TG--------------------------------------------------CC---TTGCTT-TA-AC------CG---TCCCA---------------------AT------CTG------------------ACCTGACCCAAC--TCTTA----CAATCGCTTTTCCGTC-----TTG-T----------------------------CTCACGATATTCAGCTCCACTGCATAATAAACGCGCCAAACAACGAGCGTTCGAATGGTTCTATAAGACAATGTTTAACCACAGGACCACACGCAACCATCCAATGGAAGTCATCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................CAACCATCCAATGGAAGTCATCGGC...................2511.0011000000
.....................................................................................................................................................................................................................................................................TCCGTC-----TTG-T----------------------------CTCACGATATT..............................................................................................................................2111.0011000000
.........TTGGAGTA--------AG--CTT--TTCCCACT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................GTTCGAATGGTTCTATAAGACAATGTTT.............................................................2811.0011000000
...............................................................................................................................................................................................................................................................CGCTTTTCCGTC-----TTG-T----------------------------CTCAC....................................................................................................................................2111.0010000100
.................................................................................................................................................................................................................G------------------ACCTGACCCAAC--TCTTA----CA.............................................................................................................................................................................................2011.0011000000
dp5
TCG--------------------------------TCCA-ATGAAA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CT---TTGTTCATT-CT--------------TG---------------------T---------------------------------ACCAAA----CTTA----CAATCGCTTTCCCGTC-----TTGTT----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACGCACCAAACAGCGAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACCTCACGCAGCCCTCCAATGGAAATCTTCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................GTTGAATATCGTGTGTGC---------------TG--------------------------------------------------C........................................................................................................................................................................................................................................................................................................2112.0020100001000
.................................................................................................................................................................................................................................................................................................................................CCTCTGTATTATCAACGCAC.....................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................TTA----CAATCGCTTTCCCGTC-----TT........................................................................................................................................................................2111.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................AGACAATGTTTAACCACAGGACCT................................................2411.0010010000000
...................................................................................................................................................................................................................................................................................................................CACGATATTCAGCTCCTCTG...................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................GCACCAAACAGCGAGCGTTT.....................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................CTGTATTATCAACGCACCAAAC................................................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................CGAGCGTTTGAATGGTTGTATA........................................................................2211.0010100000000
.....................................................................CGTGTGTGC---------------TG--------------------------------------------------CT---TTGTTCAT............................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................GAGCGTTTGAATGGT..............................................................................1520.5010000000001
droPer2
TCG--------------------------------TCCA-ATGAAA---ATGCATGACGAGTTGAATATCGTGTGTGC---------------TG--------------------------------------------------CT---TTGTTCATT-CT--------------TG---------------------T---------------------------------ACCAAA----CTTA----CAATCGCTTTCCCGTC-----TTGTT----------------------------CTCACGATATTCAGCTCCTCTGTATTATCAACGCACCAAACAGCGAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACCTCACGCAGCCCTCCAATGGAAATCTTCGGCCGCCAAG---CTCTTCCTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................TCACGCAGCCCTCCAATGGAAATCT........................2511.001000001
...................................................GCATGACGAGTTGAATATCGT..................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droWil2
TA-----CCTTG-----------------------------TAAGAATGATGCATGACGAGTTGAATATCGTGTGTGCGTGCGAGTTCGGGTTTG--------------------------------------------------CC---T----------C------CGAATT--------------------------C------CTA------------------ATGTAAACAAAAGATCTCAATATCAATC-----TCTATC-----TTG-TCTGTCTAATTTTCCTCCTCCTCCTCCTCCTCACGATATTCAGCTCCTCTGTATTATCAACACGCCGAACAGCGAACGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACCACATACA---CTCCAGTGGAAATCTTCGGCCGCCAAGCAGCTCTTCCTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................ATACA---CTCCAGTGGAAATCTTCGGCC..................2612.00220000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGTGGAAATCTTCGGC...................2011.00101000
............................................................................................................................................................................................................................................................................................................................................................................................TAACCACAGGACCACATACA---CTCCAG.................................2611.00101000
.......................................................................................................................................................................................................................................................................................................................................................AACAGCGAACGTTTGAATGGTT.............................................................................2211.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................TTTAACCACAGGACCACATACA---CTC....................................2511.00101000
........................................................................................................................................................................................................................................................................................................................................................ACAGCGAACGTTTGAATG................................................................................1811.00100010
......................................................................................................................................................................................................................................................................................................................................................GAACAGCGAACGTTTGAATGGT..............................................................................2211.00100010
droVir3
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTCTCACT----------------------------TTCACGATATTCAGCTCCTTTGTATTATCAACGCGCCCAACTCGCAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACAACACACAGCCTTACAGTGGAAGTCATCGGCCGCTAAG---CTCTTCCTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................TAAGACAATGTTTAACCACAG.....................................................2112.002001000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCTTACAGTGGAAGTCATCGG....................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CACAGGACAACACACAGCCTT.....................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGTGGAAGTCATCGGCCG.................2211.001000000010000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTGGAAGTCATCGGCCG.................2111.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................CCAACTCGCAGCGTTTGAATG................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GACAATGTTTAACCACAGGAC..................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGGCCGCTAAG---CTCTTCCTT2311.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CACAGCCTTACAGTGGAAGTC.........................2111.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGTGGAAGTCATCGGCC..................2111.001000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATATTCAGCTCCTTTGTATTA..............................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
--------------GTGATTGGTCC---------CTTGT-ATTTGA---ATGCATGGCGAGTTGAATATCGTGTCTGC---------------TAGAGCTGGAAAACCCAATTGGCAACCGATCCATTTTGAGATGAAGGAGTAGCTCTGTTGATT-TT-CC------AG---CTCTGGTTGTTAGCTATGTTAGTTGAATCGCAACGCAACGCAATGAAAATGTTCTCCCTGTCT------------------------------CTTGTCTTACT----------------------------TTCACGATATTCAGCTCCTTTGTATTATCAACGCGCCCAACTCGCAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACAACATACATCATTACAATGGAAGTCTTCGGCCGCTAAG---CTCTTCCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................CAACTCGCAGCGTTTGAATGG...............................................................................2111.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................CATCATTACAATGGAAGTCTTCGGC...................2511.001000001
........................................................................................................................................................................................................................................................................................................................................ATTATCAACGCGCCCAACTCGCAGC.........................................................................................2511.001100000
droGri2
TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGTCTAC-T----------------------------TTCACGATATTCAGCTCCTTTGTATTATCAACGCGCCCAACTCGCAGCGTTTGAATGGTTGTATAAGACAATGTTTAACCACAGGACAACACACAGCCCTACAGTGGAAGTCTTCGGCCGCTAAG---CTCTTCCTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................CTTGTCTAC-T----------------------------TTCACGATATTCAG...........................................................................................................................2411.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................CAGCCCTACAGTGGAAGTCTTCG.....................2311.00110

Generated: 05/18/2015 at 06:38 AM