ID:

dan_3206

 Coordinate:

scaffold_13340:20949467-20949628 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.3 -16.0 -15.9

Flybase annnotation

CDS [Dana\GF16201-cds]; exon [dana_GLEANR_17472:2]; exon [dana_GLEANR_17472:1]; CDS [Dana\GF16201-cds]; intron [Dana\GF16201-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGTACAGCAGACTTCGAGGTGGGTGTGTGCCGGAATCTCTAACAAAAAATTATTAAAAAGTTGACTAGGATTTATCTATCAAATTATAAAAATTATTTGTTTTACTCACTTGACCTGGCTACCAACTAACTCGTCAACCTCTTCACCTTTATCCGGCAGTTTTACGCCAATTTCAGTACCGACTGCAACGAGAGCAACATGAGCGGCCG
**************************************************************........(((.((((...(((((..((...((((((.((((.(((.....((((.((((.....))))))))....))).)))).))))))..........)).))))))))).)))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 V106
head
 M044
female body
 V039
embryo
 V055
head
.........................................................................................................................................................................................................................................GACTGCAACGAGAGCAACATGAGC..... 24 0 1 4.00 4 2 1 1 0 0 0
....................................................................................................................................................................................................................................GTACCGACTGCAACGAGAGC.............. 20 0 1 4.00 4 0 1 3 0 0 0
..............................................................GACTTCGAGGTGGGTGTG...................................................................................................................................................................................... 18 0 1 3.00 3 0 0 3 0 0 0
........................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACT......................... 21 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................................................................................CAACGAGAGCAACATGAGC..... 19 0 1 2.00 2 1 1 0 0 0 0
......................................................................................................................................................................................................................TTACGCCAATTTCAGTACCGACTGC....................... 25 0 1 2.00 2 1 0 0 1 0 0
..............................................................................................................................................................TCACTTGACCTGGCTACCAACT.................................................................................. 22 0 1 2.00 2 0 0 0 2 0 0
...................................................................................................................................................................................................................................AGTACCGACTGCAACGAGAGCAAC........... 24 0 1 2.00 2 0 2 0 0 0 0
....................................................................................................................................................................................................................................GTACCGACTGCAACGAGAGCAACA.......... 24 0 1 2.00 2 0 1 0 1 0 0
...............................................................................................................................................................................................................................................AACGAGAGCAACATGAGC..... 18 0 1 2.00 2 1 0 0 0 1 0
........................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTGC....................... 23 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TCAGTACCGACTGCAACGAGAGCAAC........... 26 0 1 1.00 1 0 0 0 0 1 0
..............................................................................................................................................................................................................................ATTTCAGTACCGACTGCAACGAGA................ 24 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................TACGCCAATTTCAGTACCGACTGCAA..................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................GACTTCGAGGTGGGTGTGTGCCG................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
......................................................GTACAGCAGACTTCGAGGTGGG.......................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
.................................................GGTTAGTACAGCAGACTTCGA................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................GTTTTACGCCAATTTCAGTACCGATTGC....................... 28 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................CAACGAGAGCAACATGAGCGGC.. 22 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................TTCAGTACCGACTGCAACGAGA................ 22 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................TTCAGTACCGACTGCAACGAGAGCAACA.......... 28 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................GTACCGACTGCAACGAGAGCAAC........... 23 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................GTACCGACTGCCACGAGAGCAAC........... 23 1 1 1.00 1 0 1 0 0 0 0
............................................................CAGACTTCGAGGTGGGTGTGTG.................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................TGCAACGAGAGCAACATGAGCGGCC. 25 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................................CAACGAGAGCAACATGAGCG.... 20 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTGCAAC.................... 26 0 1 1.00 1 0 0 0 1 0 0
.........TTTTCAAGTGCCAGTGGAAGACT...................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................TACCGACTGCAACGAGAGC.............. 19 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................AGTACCGACTGCAACGAGAGC.............. 21 0 1 1.00 1 1 0 0 0 0 0
................................................AGGTTAGTACAGCAGACTTCG................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................................................................................................AGTACCGACTGCAACGAGAGCAACATG........ 27 0 1 1.00 1 0 0 1 0 0 0
...............................................................ACTTCGAGGTGGGTGTGTG.................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
............................................................CAGACTTCGAGGTGGGTGTG...................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................CGAGAGCAACATGAGCGGCC. 20 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................................................................CAACTAACTCGTCAACCTCTT.................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................................................................................................AGTTTTACGCCAATTTCAGTACCGA........................... 25 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................GTCTTACGCCAATTTCAGTACCGACTG........................ 27 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................TTTACGCCAATTTCAGTACCGACT......................... 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................ACGAGAGCAACATGAGCG.... 18 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................GGACCGACTGCAACGAGAGC.............. 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCAATTTCAGTACCGACTGCAA..................... 24 0 1 1.00 1 1 0 0 0 0 0
...........................................................GAAGACTTCGAGGTGGGTGTGTGCC.................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................AGTACCGACTGCAACGAGAGCAACA.......... 25 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................................ACTGCAACGAGAGCAACATGAGC..... 23 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................TTAAGTACCGACTGCAACGAGAG............... 23 1 1 1.00 1 1 0 0 0 0 0
.................................ATGAAGGTCAGAAGAAGGTTAGTAC............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................TACCGACTGCAACGAGAGCAACATG........ 25 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................................................................TTCAGTACCGACTGCAACGAGAGC.............. 24 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................CAGTACCGACTGCAACGAGAGC.............. 22 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................ACCGACTGCAACGAGAGCAACATG........ 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TCAGTACCGACTGCAACGAGAGC.............. 23 0 1 1.00 1 0 0 0 1 0 0
.................................................................................................................................................................................................................................................CGAGAGCAACATGAGCGGC.. 19 0 1 1.00 1 1 0 0 0 0 0
.................................ATGAAGGTAAGAAGAAGGTTAG............................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
............................................................................................................................................................................................................................................TGCAACGAGAGCAACATGAGCGGC.. 24 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................CTTGACCTGGCTACCAACTAACTCG............................................................................ 25 0 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................................................ACCGACTGCAACGAGAGCAACATGAGC..... 27 0 1 1.00 1 0 1 0 0 0 0
...........................................................GCAGACTTCGAGGTGGGT......................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................................GCAACGAGAGCAACATGAGC..... 20 0 1 1.00 1 0 1 0 0 0 0
.................................................GGTTAGTACAGCAGACTTCG................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................TTACTCACTTGACCTGGCTACCAA.................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..................................................GTTAACACAGCAGGCTTCG................................................................................................................................................................................................. 19 3 4 0.25 1 0 1 0 0 0 0
..................................TGAAGGTCAGAAGAAGTTTTA............................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0
.................................................................................................................................................................................................................................................GGAGAGCAACATCAGCGGC.. 19 2 6 0.17 1 0 0 0 1 0 0
................................TAAGAATGTCAGGAGAAGGT.................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 1

Anti-sense strand reads

AAGGTTTCGAAAAGTTCACGGTCACCTTCTGAATACTTCCAGTCTTCTTCCAATCATGTCGTCTGAAGCTCCACCCACACACGGCCTTAGAGATTGTTTTTTAATAATTTTTCAACTGATCCTAAATAGATAGTTTAATATTTTTAATAAACAAAATGAGTGAACTGGACCGATGGTTGATTGAGCAGTTGGAGAAGTGGAAATAGGCCGTCAAAATGCGGTTAAAGTCATGGCTGACGTTGCTCTCGTTGTACTCGCCGGC
**********************************************************************************........(((.((((...(((((..((...((((((.((((.(((.....((((.((((.....))))))))....))).)))).))))))..........)).))))))))).)))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M058
embryo
 V106
head
 V039
embryo
.....................................................................................................................................................................................................TAGAAATAGGCCGTCACAAT............................................. 20 2 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................TGGAAAAAGGCCGTCATAAT............................................. 20 2 1 1.00 1 1 0 0 0
.......................................................................CACCCACACACGGCTTAAGAAAT........................................................................................................................................................................ 23 3 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................TGTAGAAATGGGCCGTCAAAAT............................................. 22 3 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................GTGGAAATTGGCTGTCATAAT............................................. 21 3 4 0.50 2 2 0 0 0
....................................................................................................................................................................................................GTGGAAATGGGCGGTCATAAT............................................. 21 3 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................GTGGAAATGGGCTGTCACAAT............................................. 21 3 8 0.38 3 3 0 0 0
....................................................................................................................................................................................................TTGGAAATAGGCTGTCATAAT............................................. 21 3 3 0.33 1 1 0 0 0
....................................................................................................................................................................................................GTCGAAATAGACCGTCATAAT............................................. 21 3 3 0.33 1 1 0 0 0
.......................................................................................................................TCCTAAGTAGATAGTTAAAGA.......................................................................................................................... 21 3 3 0.33 1 0 0 1 0
....................................................................................................................................................................................................GTCGAAATAGTCCGTCACAAT............................................. 21 3 4 0.25 1 1 0 0 0
....................................................................................................................................................................................................GTCGAAATGGACCGTCAAAAT............................................. 21 3 4 0.25 1 1 0 0 0
.......................................................................................................................................................................................................GAAATGGGCCGTCATAAT............................................. 18 2 5 0.20 1 1 0 0 0
....................................................................................................................................................................................................GTAGAAATGGGCCGTCACAAT............................................. 21 3 5 0.20 1 1 0 0 0
...................................................................................................................................................................................................CGTGGAAATTGGCCGTCAAAAA............................................. 22 3 5 0.20 1 1 0 0 0
...................................................................................................................................................................................................CGTGGAAATTGACCGTCAAAAT............................................. 22 3 5 0.20 1 1 0 0 0
....................................................................................................................................................................................................GTAGAAATAGTCCGTCATAAT............................................. 21 3 5 0.20 1 1 0 0 0
....................................................................................................................................................................................TTGAGCAGCTGGATAAGT................................................................ 18 2 6 0.17 1 0 0 1 0
.......................................................................................................................................................................................................GAAATAGGCAGTCATAAT............................................. 18 2 7 0.14 1 1 0 0 0
.....................................................................................................................................................................................................TGGAAAAAGGCCGTCAGTAT............................................. 20 3 11 0.09 1 1 0 0 0
....................................................................................................................................................................................................GTCGAAATGGGCTGTCAAAAT............................................. 21 3 15 0.07 1 1 0 0 0
.........................................................................CCCACAAACGGCTTAAGAGA......................................................................................................................................................................... 20 3 16 0.06 1 0 1 0 0
........................................................................................................................................................................................................................................GCTGGCGGTGGTCTCGTTGT.......... 20 3 20 0.05 1 0 0 0 1
......................................................................................................................................................................................................AGAAATAGGGCGTCAAAGT............................................. 19 3 20 0.05 1 1 0 0 0
.......................ACTTTGTGCATACTTCCAGT........................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:20949417-20949678 - dan_3206 TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----ACA------GCAGA----CTTCGAGGTGGGTGTGTGCC---------------GG--A----AT-----CTCTA-----AC------A-AAAAATT---ATTA-----------AAAAGTTGACTAGGATTTATCTATCAA---ATTA-----------T--------------------------AAAAATTATTTGTTTTACTCACTTGACCTGGCTACC-------------------------------AACTA---ACT-C-------GTCAACCTCTTCA---CCTTTA--------TC----C-GGCAGTTTTACGCCAATTTCAGTACCGACTG---CAACGA------GA---------------GCAACATGAGCGGCCG
droBip1 scf7180000396413:1452550-1452820 + TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----A-------AGCAGA----CTTCGAGGTGGGTGTGTGCC---------------GG--A----ATCTCT-----AACAAAAATT--AT-----TAATTAAAT---------AAGAAAAAGTTGACGGGGAGTTTTCAATCAT-----TC-CCCA----------------------------------AAAATTATTAGTCTTACACACTTGACCTGGCAACC-------------------------------GACTA---ACT-C-------GCCAACCTCTTTA---CCTTTTT--------C----C-GGCAGTTTTACGCCAATTTCAGCACCGACTG---CAACGA------GA---------------GCAACATGAGCGGACG
droKik1 scf7180000302261:408700-408980 - TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAGAAGAAGGTTAGT----ACATCATCAGCAGACGGACTTCGAGGTGGGTGTGTGCCGGGCCGTGCCTGGCCGG--GATT-------------------TCA--GGG-GACTTTCTG--GCC-----------CAAAGTTGGCTGCGAGTCTCCAGTCATT--------------------------------------------CGTAGC---------CCAACAGTT------------CCAGACCCA----------------------AACTC---ACT-TT--CATC-----------C---GTATCT------TC-TC----C-GGCAGTTCTTTGCCAATTTCAGCACCGAAAA---CATCATCACCGCCAGCAAC---AG---CAACAACATGAGTGGCCG
droFic1 scf7180000454073:3379802-3380082 + TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGGACTTCGAGGTGGGTGTGTGCC---------------GGC-G----ATCTCT-CCGGA-----AATT--CAG-GAAAACCTGAAAGA-----------AAAAGTGACCGGCAAGCCTCCTGTCACCAAATTA-CCC-C-----T--------------------------TGAGCTTACCGGCTCGGAACTCTCCACC-AGTCACT-------------------------------GATAA---ACT-A--------------------ACCAAT-----------CCCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CATCGA------CAC------------CAACAACATGAGCGGCCG
droEle1 scf7180000491280:2249891-2250167 - TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAGCTTCGAGGTGGGTGTGTGCC---------------GGT-A----ATTTCT-CCTGA-----AATT--TGGCCAATTACTAAACGG-----------AAAAGTTAACGGCGAGCCTCCAGTCA-------------C-----T--------------------------CGAAATTACCAGTTTCAAACACTC-------------------------------------------GACTT---ACT-TTC-CACT-----------ATTTTACA--------CC-CCCGACTTTGCAGTTCTACGCCAATTTCAGCACCGATTGTAACACCGA------CAACAAC---A------GCAACATGAGCGCCCG
droRho1 scf7180000779336:462-744 + TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCC---------------GGT-A----ATTTCT-CTCGA-----AATT--AGG-CAAAAATGAAAAGG-----------AAAAGTTAACGGCGAGCCTCCATTCATCGAATCTCCCCAC-----T--------------------------TAAAATTATCAGTTCCAAACACTC-------------------------------------------AACTA---ACT-TT-ACTA--------------CTTTAT--------CC-CTCGACCTCGCAGTTCTACGCCAATTTCAGCACCGACTG---TATCGA------CAACAAC---A------GCAACATGAGCGCCCG
droBia1 scf7180000302113:1425105-1425375 + TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACCTCGAGGTGGGT---------------------CGG--GCAAAAT-----CGAGA-----AAAT--AGG-GGATAACTAAGAGG-----------AAAAGTTGACGGCGAGCCTCCCGTCACCGAGACA-CCCAC-----C--------------------------TGAACCTATCAGTTCCCAACACTC-------------------------------------------GACTT---AT-AGAC-ACC------------C---CTG-----------------TT-CCCAGTTCTACGCCAATTTCAGTACCGAGTG---CACCGA------CAGCAACACCAG---CGACACCATGAGCGGCCG
droTak1 scf7180000415765:391341-391629 - TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATCAGCAGCAGACGAACTACGAGGTGGGTGTGTTTT---------------A---GAGCAATCTCC-TCCGA-----ATTAAAGGAGGAAAATC--AAAGG-----------AAAAGTGGGTGACGAGCCTCCATTCA-------------C-----T--------------------------TGAAATTATCAGTTCCAAACATTC-------------------------------------------GACTTATAG--AGAC-CCCT-----------A-TTTCGT---A----TC-GCCTATC-CCCAGTTCTACGCCAATTTCAGTACCGATTG---CAGCGA------CAGCAACAACAGCAATAGCAACATGAGTGCCCG
droEug1 scf7180000409555:443986-444270 - TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCC---------------GG--GATTAAT-----CTCGA-----AATT--GAA-AGAAAACTGAAAGG-----------AAAAGTTTGCGGCGAGCCTCCAGTCATCGAATTC-CCCAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------GACTA---ACT-CTC-CCGT----AC-----TATTTTAT--------CC-CTCGACC-CGTAGTTCTACGCCAATTTTAGCACCGACTG---CACCGA------AG---AC---AG---CAACAACATGAGCGGCCG
dm3 chr3R:25959761-25960050 - TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CTGTG-----CCGG--GATTAAT-----CTCGA-----ATCT--GGG-AAAAATCTGAGTGG-----------AAAAGTCGACGGCGAGCCTCCAGTCATCGAGTTA-CCCAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------TAATA---GC-AGTC-CCCT-----------TGTTTTGT--------CC-CCCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CACCGA------CAGCAAC---AG---CAACAACATGAG---CCG
droSim2 3r:25305292-25305581 - dsi_28675 TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CTGTG-----CCGG--GATTAAT-----CTCGA-----ATCT--GGG-GAAAATCTGAGTGG-----------AAAAGTCGACGACGAGCCTCCATTCAACGAGTTC-CCTAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------TAATA---AT-AGTC-CCCT-----------TCTTTTGT--------CC-ACCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CACCGA------CAGCAAC---AG---CAACAACATGAG---CCG
droSec2 scaffold_4:4812626-4812915 - dse_1304 TCCCAAAGCTTTTTAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CTGTG-----CCGG--GATTAAT-----CTCGA-----ATCT--GGG-GAAAATCTGAGTGG-----------AAAAGTCGACGGCGAGCCTCCATTCAACGAGTCC-CCCAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------TAATA---AT-AGTC-CCCT-----------TCTTTTGT--------CC-ACCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CACCGA------CAGCAAC---AG---CAACAACATGAG---CCG
droYak3 3R:26891504-26891790 - dya_1159 TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CCGTG-----CCGG--GATTTAT-----CTCGA-----AACT--GGGGGAAAATCTGAGTGG-----------AAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCA-CCCAC-----T--------------------------TGATGTTATCAATTTTCAACACTC-------------------------------------------CAATA---GT-AATC-CCCT-----------CA---AAT----------------TT-CGCAGTTCTTCGCAAATTTCAGCACCGATTG---CACCGACAGCGACAGCAAC---AG---CAACAACATGAG---CCG
droEre2 scaffold_4820:2040014-2040304 + der_921 TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CCGTG-----CCGG--GAATAAT-----CTCGA-----AGCT--GGGAGAAAATCTGAGTGG-----------AAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTC-CCCAC-----T--------------------------TGAAATTATCAGTTCCCAGCACTC-------------------------------------------CAATA---GT-AATC-CCCT-----------TGTCTTGT--------CC-ACCGATC-CGCAGTTCTACGCAAATTTCAGCACCGACTG---CACCGA------CAGCAAC---AG---CGACACCATGAG---CCG
dp5 2:1545532-1545765 + dps_292 TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T---------------------------------------------------------CTTAGCGA-----AATT--G------TAAGTAAAAGA-----------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCAACA------------------CTGCCCGTATCGAAATTACC-GTTTTCAACATCT-------------------------------------------AACTA---ACT--T-ACTCT-----------T---GCATTCTTGC--GGACCCGGCC-TGAAGCTCTACGCAAACTTCAGCACAAA---------------------------------CAGCAAAATGAGCGCCCG
droPer2 scaffold_7:4348434-4348667 + TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T---------------------------------------------------------CTTAGCGA-----AATT--G------TAAGTAAAAGA-----------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCAACA------------------CTGCCCGTATCGAAATTACC-GTTTTCAACATCT-------------------------------------------AACTA---ACT--T-ACTCT-----------T---GCATTCTTGC--GGACCCGGCC-TGAAGCTCTACGCAAACTTCAGCACAGAC---------------------------------AGCAAAATGAGCGCCCG
droWil2 scf2_1100000004943:9413772-9414032 - dwi_3397 TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGT----ACATC---AGTAGATTGCATTCGAGGTGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGCGGCGATTTTTCTATCAAATCTATC-T--AT---ATCTGTGCACATATAACAATTGCT--TATCAAAATTTCCAGTAATTGGAGTTT-------------------------------------------AACTA---TAT-TT-CCTTT-----------C---TTATTTTTC---CG-GCCGGCA-AATAGTTTTACGCAGACTTCAGTACAGAC---------------------------AA---CAGCAACATGAGCGGACG
droVir3 scaffold_12855:3594827-3595104 - dvi_3748 TTCCTAAGCTTTTCAAGTGCCAATGGAAGACGTATGAAGGTCAGAAGAAGGTTAGT----ACATC---GTTTCATTACGTTCGAGGTGGGTGTGTTTA---------------GGCCAAGTAA----------AAC-------------CAAAATTAAAGCAA--A--T-AAATCATTTTTTACGGCGATTTATCAATCAA--AATTT-TGCAT-----T-----------------TAGT--TAACAAAATTATCAATTTGTAGCAGCT-------------------------------------------AAATT---AAT-GTT-TGGT------------------TTTTTCCACAC-TCCGGCG-TGCAGCTTTACGCGAATTTCAGTGCAGACTC---CGTTA------------------------AGAACATGGCAAACCG
droMoj3 scaffold_6540:7886421-7886704 - dmo_1861 TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACATTCGAGGTGGGTCTCTGTC---------------GTCCGTTTAAA-----TACGA-----A----------------TAAAAGTAAAAGTG----AACTTTTCCCGGCGATTTATTAATCAAAAT--TT-T------------AGCAT---------TTAC------------------TACCTAACACTC--------------------AAAATTTCTCTTATCCAATATTTTAATG---TT-TGAT-ATC--------------TCTTAC--------TT-TCCGGCG-TGCAGCTCTACGCGAACTTCTCCAAAGAC------ACCGT------CA---------------GCAACATGAGTGGCCG
droGri2 scaffold_14906:6254875-6255128 - TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACGCTCGAGGTGGGTGCGTTTT---T------------------------TT-CAGCA-----A----------ATAAAGTAAAAGC------A----AAAATCAAGCGACGATTCATCAATCAAAACCTTT-TGCAT-----A-----------------TACT-----TAACAACATTATT-------------------------------------------------------ATTA---ACT-TT-AATA------------TATTCTGT--------TT-TGCGGTG-TGCAGCTCTTTGCGAATTTCAACACAGACTC---A---------------------------AACAACATGGCAAGCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----ACA------GCAGA----CTTCGAGGTGGGTGTGTGCC---------------GG--A----AT-----CTCTA-----AC------A-AAAAATT---ATTA-----------AAAAGTTGACTAGGATTTATCTATCAA---ATTA-----------T--------------------------AAAAATTATTTGTTTTACTCACTTGACCTGGCTACC-------------------------------AACTA---ACT-C-------GTCAACCTCTTCA---CCTTTA--------TC----C-GGCAGTTTTACGCCAATTTCAGTACCGACTG---CAACGA------GA---------------GCAACATGAGCGGCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................GACTG---CAACGA------GA---------------GCAACATGAGC.....2414.004020011
........................................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTG---CAACGA------GA---------------GC..............2014.004000013
........................................................................GA----CTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1813.003000003
............................................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACT.................................................2112.002020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACGA------GA---------------GCAACATGAGC.....1912.002010010
..........................................................................................................................................................................................................................................................................................................................................................................................TTACGCCAATTTCAGTACCGACTG---C............................................2512.002110000
........................................................................................................................................................................................................................................................................TCACTTGACCTGGCTACC-------------------------------AACT.....................................................................................................................................2212.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG---CAACGA------GA---------------GCAAC...........2412.002000020
........................................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTG---CAACGA------GA---------------GCAACA..........2412.002100010
......................................................................................................................................................................................................................................................................................................................................................................................................................AACGA------GA---------------GCAACATGAGC.....1812.002011000
............................................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTG---C............................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACCGACTG---CAACGA------GA---------------GCAAC...........2611.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTACCGACTG---CAACGA------GA---------------................2411.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGTACCGACTG---CAA..........................................2611.001010000
........................................................................GA----CTTCGAGGTGGGTGTGTGCC---------------G................................................................................................................................................................................................................................................................................................................................................2311.001000010
......................................................GT----ACA------GCAGA----CTTCGAGGTGGG........................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................GGTTAGT----ACA------GCAGA----CTTCGA..............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACGA------GA---------------GCAACATGAGCGGC..2211.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTG---CAACGA------GA---------------................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTG---CAACGA------GA---------------GCAACA..........2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTG---CAACGA------GA---------------GCAAC...........2311.001000010
......................................................................CAGA----CTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2211.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................TG---CAACGA------GA---------------GCAACATGAGCGGCC.2511.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACGA------GA---------------GCAACATGAGCG....2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTG---CAAC.........................................2611.001100000
.........TTTTCAAGTGCCAGTGGAAGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................TACCGACTG---CAACGA------GA---------------GC..............1911.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG---CAACGA------GA---------------GC..............2111.001010000
................................................AGGTTAGT----ACA------GCAGA----CTTCG...............................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG---CAACGA------GA---------------GCAACATG........2711.001000001
.........................................................................A----CTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................CAGA----CTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................CGA------GA---------------GCAACATGAGCGGCC.2011.001100000
.........................................................................................................................................................................................................................................................................................C-------------------------------AACTA---ACT-C-------GTCAACCTCTT..........................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................AGTTTTACGCCAATTTCAGTACCGA...................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTACGCCAATTTCAGTACCGACT.................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACGA------GA---------------GCAACATGAGCG....1811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCCAATTTCAGTACCGACTG---CAA..........................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG---CAACGA------GA---------------GCAACA..........2511.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................ACTG---CAACGA------GA---------------GCAACATGAGC.....2311.001000010
.................................ATGAAGGTCAGAAGAAGGTTAGT----AC....................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................TACCGACTG---CAACGA------GA---------------GCAACATG........2511.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTG---CAACGA------GA---------------GC..............2411.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTACCGACTG---CAACGA------GA---------------GC..............2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACCGACTG---CAACGA------GA---------------GCAACATG........2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACCGACTG---CAACGA------GA---------------GC..............2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGA------GA---------------GCAACATGAGCGGC..1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................TG---CAACGA------GA---------------GCAACATGAGCGGC..2411.001000010
...........................................................................................................................................................................................................................................................................CTTGACCTGGCTACC-------------------------------AACTA---ACT-C-------G....................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACCGACTG---CAACGA------GA---------------GCAACATGAGC.....2711.001000010
.....................................................................GCAGA----CTTCGAGGTGGGT.......................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................G---CAACGA------GA---------------GCAACATGAGC.....2011.001000010
.................................................GGTTAGT----ACA------GCAGA----CTTCG...............................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....................................................................................................................................................................................................................................................................TTACTCACTTGACCTGGCTACC-------------------------------AA.......................................................................................................................................2411.001010000
droBip1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----A-------AGCAGA----CTTCGAGGTGGGTGTGTGCC---------------GG--A----ATCTCT-----AACAAAAATT--AT-----TAATTAAAT---------AAGAAAAAGTTGACGGGGAGTTTTCAATCAT-----TC-CCCA----------------------------------AAAATTATTAGTCTTACACACTTGACCTGGCAACC-------------------------------GACTA---ACT-C-------GCCAACCTCTTTA---CCTTTTT--------C----C-GGCAGTTTTACGCCAATTTCAGCACCGACTG---CAACGA------GA---------------GCAACATGAGCGGACGSizeHit CountTotal NormTotal
No Reads
droKik1
TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAGAAGAAGGTTAGT----ACATCATCAGCAGACGGACTTCGAGGTGGGTGTGTGCCGGGCCGTGCCTGGCCGG--GATT-------------------TCA--GGG-GACTTTCTG--GCC-----------CAAAGTTGGCTGCGAGTCTCCAGTCATT--------------------------------------------CGTAGC---------CCAACAGTT------------CCAGACCCA----------------------AACTC---ACT-TT--CATC-----------C---GTATCT------TC-TC----C-GGCAGTTCTTTGCCAATTTCAGCACCGAAAA---CATCATCACCGCCAGCAAC---AG---CAACAACATGAGTGGCCGSizeHit CountTotal NormTotal
No Reads
droFic1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGGACTTCGAGGTGGGTGTGTGCC---------------GGC-G----ATCTCT-CCGGA-----AATT--CAG-GAAAACCTGAAAGA-----------AAAAGTGACCGGCAAGCCTCCTGTCACCAAATTA-CCC-C-----T--------------------------TGAGCTTACCGGCTCGGAACTCTCCACC-AGTCACT-------------------------------GATAA---ACT-A--------------------ACCAAT-----------CCCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CATCGA------CAC------------CAACAACATGAGCGGCCGSizeHit CountTotal NormTotal
No Reads
droEle1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAGCTTCGAGGTGGGTGTGTGCC---------------GGT-A----ATTTCT-CCTGA-----AATT--TGGCCAATTACTAAACGG-----------AAAAGTTAACGGCGAGCCTCCAGTCA-------------C-----T--------------------------CGAAATTACCAGTTTCAAACACTC-------------------------------------------GACTT---ACT-TTC-CACT-----------ATTTTACA--------CC-CCCGACTTTGCAGTTCTACGCCAATTTCAGCACCGATTGTAACACCGA------CAACAAC---A------GCAACATGAGCGCCCGSizeHit CountTotal NormTotal
No Reads
droRho1
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCC---------------GGT-A----ATTTCT-CTCGA-----AATT--AGG-CAAAAATGAAAAGG-----------AAAAGTTAACGGCGAGCCTCCATTCATCGAATCTCCCCAC-----T--------------------------TAAAATTATCAGTTCCAAACACTC-------------------------------------------AACTA---ACT-TT-ACTA--------------CTTTAT--------CC-CTCGACCTCGCAGTTCTACGCCAATTTCAGCACCGACTG---TATCGA------CAACAAC---A------GCAACATGAGCGCCCGSizeHit CountTotal NormTotal
No Reads
droBia1
TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACCTCGAGGTGGGT---------------------CGG--GCAAAAT-----CGAGA-----AAAT--AGG-GGATAACTAAGAGG-----------AAAAGTTGACGGCGAGCCTCCCGTCACCGAGACA-CCCAC-----C--------------------------TGAACCTATCAGTTCCCAACACTC-------------------------------------------GACTT---AT-AGAC-ACC------------C---CTG-----------------TT-CCCAGTTCTACGCCAATTTCAGTACCGAGTG---CACCGA------CAGCAACACCAG---CGACACCATGAGCGGCCGSizeHit CountTotal NormTotal
No Reads
droTak1
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATCAGCAGCAGACGAACTACGAGGTGGGTGTGTTTT---------------A---GAGCAATCTCC-TCCGA-----ATTAAAGGAGGAAAATC--AAAGG-----------AAAAGTGGGTGACGAGCCTCCATTCA-------------C-----T--------------------------TGAAATTATCAGTTCCAAACATTC-------------------------------------------GACTTATAG--AGAC-CCCT-----------A-TTTCGT---A----TC-GCCTATC-CCCAGTTCTACGCCAATTTCAGTACCGATTG---CAGCGA------CAGCAACAACAGCAATAGCAACATGAGTGCCCGSizeHit CountTotal NormTotal
No Reads
droEug1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCC---------------GG--GATTAAT-----CTCGA-----AATT--GAA-AGAAAACTGAAAGG-----------AAAAGTTTGCGGCGAGCCTCCAGTCATCGAATTC-CCCAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------GACTA---ACT-CTC-CCGT----AC-----TATTTTAT--------CC-CTCGACC-CGTAGTTCTACGCCAATTTTAGCACCGACTG---CACCGA------AG---AC---AG---CAACAACATGAGCGGCCGSizeHit CountTotal NormTotal
No Reads
dm3
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CTGTG-----CCGG--GATTAAT-----CTCGA-----ATCT--GGG-AAAAATCTGAGTGG-----------AAAAGTCGACGGCGAGCCTCCAGTCATCGAGTTA-CCCAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------TAATA---GC-AGTC-CCCT-----------TGTTTTGT--------CC-CCCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CACCGA------CAGCAAC---AG---CAACAACATGAG---CCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................AACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1811029.00102900000000000000000000001000000000000002001100200110022000000000000000000000000000000000010002001001000120014100000001000000000000000000000000000001110340040000000667300100000000000000340000031000007120000000000000123813131010100110020000000203004101300006819193668811199540116182472100000000451702211010412450429629012100412150273672239312529171483110079403490
...................................................................................AGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................181514.0051400000000000000000000000000000000000000010010000000000000000000000000000000000000000000010005001201000017013110000010000000000000000000000000000000000010000020000000030010000000000000000000000110000004000000000000040160002110111120000000508007284001043231001426923411544249430000000026401110040321140215111122001131211641511117915101500200000315121550
..........................................................................CGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................20173.00730000000000000000000000000000000000000001000010000000000000000000000000000000000000000001000000100000000010000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000100002001000000000000000100000000000330101100000000000000000000000300000000101011000000011024603585000000020014210
............................................................................AACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................20162.00620000000000000000000000000000000000000000000001000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000030000110001001000000000000010000000000100101000000033037203157010111100011130
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................25142.00420000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000100000200000000300000000000000000000000000000000001000000000000000000010000001106000100122103002210100300000100100
.........................................................................ACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................21136.00360000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000300000000000000000000000000000000000000000000000000000004000200000000000000000000000000000010001000001000000000000000000000000020000000100002000000001002200212002000000001300
..........................................................................CGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................18130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000050000000001000000000000000000000000000000000000000000001000000000000000000000000000000000000020000000000000020100000000000100000000000000000000000140001000000020000000000000020000000000100000000000010000001001000000000000000
...........................................................................GAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................19125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000110000100000001000000000000000100000000000200000000010002400010000200000002300
........................................................................GACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................22121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000100000000100000000000000000000000000103000000000103001211001000000000100
.....................................................AGT----ACATA---AGCAGACGAACT..................................................................................................................................................................................................................................................................................................................................................................................20119.001900000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000100000001000000000000000000
............................................................................AACTTCGAGGTGGGTGTGT...................................................................................................................................................................................................................................................................................................................................................................19114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000100000200000000102010200010000000000001000
.............................................................................ACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000001013000011001000011001000
.......................................................................AGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................23113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000001000000000000010000000000100001000000000001100011000100000001000
......................................................................CAGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................24113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000010000110001000114000000000
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTGT.........................................................................................................................................................................................................................................................................................................................................................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000002000000001001000000300100100000100
.............................................................................ACTTCGAGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000100000101000000001012000100100000000000000
..............................................................................CTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000030000000000000000000000000000200000000000000000000000000010000000000000001000000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000121100020100000000001000
.........................................................................ACGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................19110.00100000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000020000000000000000000000000000000000000000000000000000000000000100000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................ATCTGAGTGG-----------AAAAGTCGACGGC.......................................................................................................................................................................................................................................................................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000010000010000000100100110000000000001000000000000
.............................................................................ACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTCG...............................................................................................................................................................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120200000000000000
................................................................A---AGCAGACGAACTTCGAGGTGGG........................................................................................................................................................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000300
...............................................................TA---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCT---CTGT.........................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000110000010000000000000000
.........................................................................ACGAACTTCGAGGTGGGT.......................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000010000000000000000000000000000000010000000000010000
............................................................................AACTTCGAGGTGGGTGTGTGCT---.............................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100210000001000
........................................................................GACGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000001010000000000000100000000000000000000000000000000000000000000000000000000000000
..............................................................ATA---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000001000000000000000001000000000000100
..............................................................ATA---AGCAGACGAACTTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000003000000000100000000000000000000000010
................................................................A---AGCAGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000101000000000000010
..........................................................................................................................................................TCTGAGTGG-----------AAAAGTCGACGGC.......................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000100000000000
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....................................................................................GGTGGGTGTGTGCT---CTGTG-----CCGG--G............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTG---CACCGA------CAGCAAC---AG---CA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CTTCGAGGTGGGTGTGTGCT---C............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGAGTGG-----------AAAAGTCGACGGC.......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCCAATTTCAGCACCGATTG---.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CGAACTTCGAGGTGGGTGTT....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAATTTCAGCACCGATTG---.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GAGGTGGGTGTGTGCT---CTGTG-----...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................AAGGTCAAAAGAAGGTTAGT----AC....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CAATTTCAGCACCGATTG---CACCGA------CAGC.............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................GTGGGTGTGTGCT---CTGTG-----CC.................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCT---CTGTG-----...................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............TCAAGTGCCAGTGGAAGACTTACGAA............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTGCT---CT...........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CTGTG-----CCGG--GATTAAT-----CTCGA-----ATCT--GGG-GAAAATCTGAGTGG-----------AAAAGTCGACGACGAGCCTCCATTCAACGAGTTC-CCTAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------TAATA---AT-AGTC-CCCT-----------TCTTTTGT--------CC-ACCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CACCGA------CAGCAAC---AG---CAACAACATGAG---CCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................AACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1818.00810010200004000000
...................................................................................AGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................1815.00501000000003100000
................................................................................................................................................................................AAGTCGACGACGAGCCTCC...............................................................................................................................................................................................................................................................1912.00220000000000000000
......................................................................CAGACGAACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GA------CAGCAAC---AG---CAACAACATGAG---C..2411.00100000100000000000
..................................................................................................................................................................G-----------AAAAGTCGACGACGAGCCTCC...............................................................................................................................................................................................................................................................2211.00101000000000000000
...CAAAGCTTTTCAAGTGCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...........................................................................................................................................ATCT--GGG-GAAAATCTGAGTGG-----------AA..................................................................................................................................................................................................................................................................................2311.00100000000010000000
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
........................................................................GACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
......................................................................................................................................................................................................CAACGAGTTC-CCTAC-----T--------------------------TGAAATTATC..................................................................................................................................................................................................2611.00100000000000100000
..........................................................................CGAACTTCGAGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGCACCGATTG---CACC.........................................2711.00100000000000010000
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
...............................TTACGAAGGTCAAAAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
..............................................................ATA---AGCAGACGAACT..................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
..........................................................................CGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTGT.........................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGAGT............................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................A---AGCAGACGAACTTCGAGT............................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---AG---CAACAACATGA.......2011.00100000100000000000
................................................................................................................................................................TGG-----------AAAAGTCGACGACGAGCCT.................................................................................................................................................................................................................................................................2211.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AG---CAACAACATGAG---CCG1911.00100000000001000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................AGGTGGGTGTGTGCT---CTGTG-----CCGG--GAT..........................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...........................................................................................................................................................CTGAGTGG-----------AAAAGTCGACGG........................................................................................................................................................................................................................................................................2011.00100000000000010000
.........................................................................................GTGTGTGCT---CTGTG-----CCGG--GA...........................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTGCT---.............................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
...............................................................TA---AGCAGACGAACTTCGAGGTAT.........................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
......................................................................................TGGGTGTGTGCT---CTGTG-----C..................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..........................................................................CGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................................TA---AGCAGACGAACTTCGAGT............................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
droSec2
TCCCAAAGCTTTTTAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CTGTG-----CCGG--GATTAAT-----CTCGA-----ATCT--GGG-GAAAATCTGAGTGG-----------AAAAGTCGACGGCGAGCCTCCATTCAACGAGTCC-CCCAC-----T--------------------------TGAAATTATCAGTTCCAAACACTC-------------------------------------------TAATA---AT-AGTC-CCCT-----------TCTTTTGT--------CC-ACCGATC-CGCAGTTCTACGCCAATTTCAGCACCGATTG---CACCGA------CAGCAAC---AG---CAACAACATGAG---CCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................AACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................18134.003431723
..........................................................................CGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................20110.00101207
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................2516.0060321
............................................................................AACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2016.0060303
..........................................................................CGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................1815.0051004
............................................................................AACTTCGAGGTGGGTGTGTGCT---.............................................................................................................................................................................................................................................................................................................................................................2214.0040112
...........................................................................GAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1914.0041102
...................................................................................AGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................1813.0031011
..........................................................................CGAACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2213.0031101
...........................................................................GAACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2113.0030102
...................................................................................AGGTGGGTGTGTGCT---CTGTG-----C..................................................................................................................................................................................................................................................................................................................................................2112.0020101
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AG---CAACAACATGAG---CC.1912.0020020
.....................................................................GCAGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2512.0020002
............................................................................AACTTCGAGGTGGGTGTGTGCT---CT...........................................................................................................................................................................................................................................................................................................................................................2412.0021100
.........................................................................ACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2112.0020101
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTGT.........................................................................................................................................................................................................................................................................................................................................................2612.0020200
........................................................................GACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2212.0020002
.........................................................................ACGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................1912.0020002
...........................................................................GAACTTCGAGGTGGGTGTGTGCT---CTG..........................................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2811.0010100
...................................................................................AGGTGGGTGTGTGCT---CTGTG-----CCGG--.............................................................................................................................................................................................................................................................................................................................................2411.0010001
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................2611.0010001
........................................................................GACGAACTTCGAGGTGGGTGTGTGC.................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.........................................................................ACGAACTTCGAGGTGGGTGTGTGCT---.............................................................................................................................................................................................................................................................................................................................................................2511.0010100
........................................................................GACGAACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2411.0010001
...........................................................................GAACTTCGAGGTGGGTGT.....................................................................................................................................................................................................................................................................................................................................................................1811.0010001
............................................................................AACTTCGAGGTGGGTGTGT...................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................................................................................................................................AGTCGACGGCGAGCCTCCA..............................................................................................................................................................................................................................................................1911.0011000
...........................................................................GAACTTCGAGGTGGGTGTGTGCT---CTGT.........................................................................................................................................................................................................................................................................................................................................................2711.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCACCGATTG---CACCGA------CAGCAAC---A......................2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG---CAACAACATGAG---CC.2011.0011000
..............................................................ATA---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................CAGCACCGATTG---CACCGA------CAGCAAC---.......................2511.0010010
.....................................................................................GTGGGTGTGTGCT---CTGTG-----C..................................................................................................................................................................................................................................................................................................................................................1911.0011000
...................................................................................AGGTGGGTGTGTGCT---CTGTG-----CCGG--GAT..........................................................................................................................................................................................................................................................................................................................................2711.0010100
............................................................................AACTTCGAGGTGGGTGTGTGCT---CTGTG-----...................................................................................................................................................................................................................................................................................................................................................2711.0011000
.........................................................................ACGAACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...................................................................................AGGTGGGTGTGTGCT---CTGTG-----CC.................................................................................................................................................................................................................................................................................................................................................2211.0010001
...........................................................................................................................................................................................GAGCCTCCATTCAACGAGTCC-CC...............................................................................................................................................................................................................................................2311.0010100
.................................................................................CGAGGTGGGTGTGTGCT---C............................................................................................................................................................................................................................................................................................................................................................1811.0010001
.......................................................................AGACGAACTTCGAGGTGGGTGTGTGCT---.............................................................................................................................................................................................................................................................................................................................................................2711.0010100
............................................................................AACTTCGAGGTGGGTGTGTGCT---C............................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................AGGTGGGTGTGTGCT---CTGTG-----CCGG--G............................................................................................................................................................................................................................................................................................................................................2511.0010001
.....................................................................................................................................................................................................................................................................................................................................GTC-CCCT-----------TCTTTTGT--------CC-ACCGATC-CGCAG..........................................................................2911.0010100
....................................................................................................................................GA-----ATCT--GGG-GAAAATCTGAGTG................................................................................................................................................................................................................................................................................................2211.0011000
droYak3
TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CCGTG-----CCGG--GATTTAT-----CTCGA-----AACT--GGGGGAAAATCTGAGTGG-----------AAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCA-CCCAC-----T--------------------------TGATGTTATCAATTTTCAACACTC-------------------------------------------CAATA---GT-AATC-CCCT-----------CA---AAT----------------TT-CGCAGTTCTTCGCAAATTTCAGCACCGATTG---CACCGACAGCGACAGCAAC---AG---CAACAACATGAG---CCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................AACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1817.00700500110000
...........................................................................................................................................................................................................................................................................................................................................................................................TTCGCAAATTTCAGCACCGATTG---CACC.........................................2715.00503200000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTG---CACCGACAGCGAC................................2712.00202000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TG---CACCGACAGCGACAGCAAC---.......................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCAAC---AG---CAACAACATGA.......2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACC.....................................................1911.00101000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCT---CCG..........................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
............TCAAGTGCCAGTGGAAGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..............AAGTGCCAGTGGAAGACTTACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................................................................AACTTCGAGGTGGGTGTGTGCT---CCG..........................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...........................................................................GAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................T----ACATC---AGCAGACGAACTTCGAGGTG..........................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................................................TC---AGCAGACGAACTTCGAGT............................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTG---.............................................2411.00101000000000
.............................................................CATC---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................TAGT----ACATC---AGCAGACGAACTTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGAT..................................................1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGCACCGATTG---CACCGACAGCGAC................................2811.00101000000000
......................................................................................................................................................AAAATCTGAGTGG-----------AAAAGTCGCCGGC.......................................................................................................................................................................................................................................................................2611.00100100000000
.....................................................................GCAGACGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCAGCACCGATTG---CACCGAC......................................2711.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCACCGATTG---CACCGACAGCGACA...............................2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGATTG---CACCGAC......................................2811.00101000000000
...............................................................TC---AGCAGACGAACTTCGAGG............................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AG---CAACAACATGAG---CC.1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTG---C............................................2511.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTG---CACCGAC......................................2111.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CACCGACAGCGACAGCAAC---A......................2011.00100010000000
.......................................................T----ACATC---AGCAGACGAACTTCGAGT............................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGCACCGATTG---CACCGACAGC...................................2511.00101000000000
.................................................................................CGAGGTGGGTGTGTGCT---CCG..........................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
droEre2
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCT---CCGTG-----CCGG--GAATAAT-----CTCGA-----AGCT--GGGAGAAAATCTGAGTGG-----------AAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTC-CCCAC-----T--------------------------TGAAATTATCAGTTCCCAGCACTC-------------------------------------------CAATA---GT-AATC-CCCT-----------TGTCTTGT--------CC-ACCGATC-CGCAGTTCTACGCAAATTTCAGCACCGACTG---CACCGA------CAGCAAC---AG---CGACACCATGAG---CCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................AACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................18121.002110000200
..........................................................................CGAACTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................1813.0030000030
.......................................................................AGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2313.0030001110
...................................................................................AGGTGGGTGTGTGCT---CCG..........................................................................................................................................................................................................................................................................................................................................................1822.5050001040
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AG---CGACACCATGAG---C..1912.0020001100
....................................................................AGCAGACGAACTTCGAGGTGGGT.......................................................................................................................................................................................................................................................................................................................................................................2312.0020000020
.......................................................................AGACGAACTTCGAGGTGGG........................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
.............................................................................ACTTCGAGGTGGGTGTGT...................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAATTTCAGCACCG....................................................2011.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCAGCACCGACTG---CAC..........................................2311.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTG---CACC.........................................2011.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AG---CGACACCATGAG---CC.1911.0010000010
..............................................................................................................................................................................AAAAGTCGACGGCGAGCCTCCAGTCA..........................................................................................................................................................................................................................................................2611.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................CGACTG---CACCGA------CAGCAAC---AG---CGACA.............2611.0011000000
......................................................GT----ACATC---AGCAGACGAACTTCGAGG............................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
............................................................................AACTTCGAGGTGGGTGTGTGCT---CCGTG-----...................................................................................................................................................................................................................................................................................................................................................2711.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................CGACTG---CACCGA------CAGCAAC---AG---C.................2211.0010100000
............................................................ACATC---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................GAGTTC-CCCAC-----T--------------------------TGAAATTATCAGTT..............................................................................................................................................................................................2611.0011000000
...........................................................................................................................................................................................................................................................................................................................ATA---GT-AATC-CCCT-----------TGTCTTGT--------CC-.......................................................................................2311.0010000100
........................................................................................................................................................AATCTGAGTGG-----------AAAAGTCGAC..........................................................................................................................................................................................................................................................................2111.0010100000
..........................................................................CGAACTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........................................................................................................................................................................................................................................................................................................................................................CTTGT--------CC-ACCGATC-CGCAGT.........................................................................2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGACTG---C............................................2211.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................GCACCGACTG---CACCGA------CAGCAAC---AG---C.................2611.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................................ACCGA------CAGCAAC---AG---CGACA.............1911.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGACTG---CACCGA------CAGCAAC---AG---CG................2411.0011000000
.......................................................................AGACGAACTTCGAGGTGGGTGTGT...................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGCACCGACTG---CACCGA------CAGCAAC---AG---C.................2911.0010100000
..............................................................................................................................................................AGTGG-----------AAAAGTCGACGGC.......................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGACTG---CACCGA------CAGCAAC---A......................2811.0011000000
.....................................................AGT----ACATC---AGCAGACGAACTTCGA..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................GATC-CGCAGTTCTACGCAAATTTCAGC........................................................2711.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTG---CACCGA------CA...............................2411.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................GACTG---CACCGA------CAGCAAC---AG---CGACACC...........2711.0011000000
.....................................................................GCAGACGAACTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..............................................................................CTTCGAGGTGGGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCGA------CAGCAAC---AG---CGACA.............1811.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................ACTG---CACCGA------CAGCAAC---AG---CGACACC...........2611.0010000100
.............................................................................ACTTCGAGGTGGGTGTGTGCT---.............................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................ATC---AGCAGACGAACTTCG...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTG---CACCGA------C................................2311.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTTCTACGCAAATTTCAGCA.......................................................2011.0010000010
..........................................................................................................................................................................................................................................................ATTATCAGTTCCCAGCACTC-------------------------------------------CAATA---GT-..............................................................................................................................2711.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................G---CACCGA------CAGCAAC---AG---CGACAC............2211.0010001000
.............................................................................ACTTCGAGGTGGGTGTGTGCT---CCGTG-----CC.................................................................................................................................................................................................................................................................................................................................................2811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---AG---CGACACCATGAG---CC.2111.0010000010
.............................................................................................................................................................................................................................................................................................................................A---GT-AATC-CCCT-----------TGTCTTGT--------CC-ACCG...................................................................................2511.0011000000
...................................................................................AGGTGGGTGTGTGCT---CCGTG-----...................................................................................................................................................................................................................................................................................................................................................2020.5010000010
dp5
TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T---------------------------------------------------------CTTAGCGA-----AATT--G------TAAGTAAAAGA-----------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCAACA------------------CTGCCCGTATCGAAATTACC-GTTTTCAACATCT-------------------------------------------AACTA---ACT--T-ACTCT-----------T---GCATTCTTGC--GGACCCGGCC-TGAAGCTCTACGCAAACTTCAGCACAAA---------------------------------CAGCAAAATGAGCGCCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................CGCCCGTCG---------GAAGGTCAGAAGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000121
................GCGCCCGTCG---------GAAGGTCAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...................................................................................................................................................................................................................................................................TTTCAACATCT-------------------------------------------AACTA---ACT--T-ACTCT-----------..........................................................................................................2512.0020000000200
..............................................................................................................................................................................................................................................................................................................................................................ATTCTTGC--GGACCCGGCC-TGAAG..........................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................CT-------------------------------------------AACTA---ACT--T-ACTCT-----------T---GCAT..................................................................................................2111.0010100000000
..........................................AGAAGAAGGTTAGC----AAACT---T---------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................2011.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAACTTCAGCACAAA---------------------------------C.................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................AAACTTCAGCACAAA---------------------------------CAGC..............1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................CTCTACGCAAACTTCAGCACAAA---------------------------------C.................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCACAAA---------------------------------CAGCAAAATGAGCGCCCG2511.0010000001000
...............AGCGCCCGTCG---------GAAGGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
...............................................................................................................................................................................................................T-CTTTCAACA------------------CTGCCCGTATC...........................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................CAAACTTCAGCACAAA---------------------------------CAGCA.............2111.0010000010000
.....................................................................................................................................................................................................................................................................................................................................................................................AAGCTCTACGCAAACTTCAG.........................................................2011.0010100000000
........................CG---------GAAGGTCAGAAGAAGGTTAG...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................C--GGACCCGGCC-TGAAGCTCTAC....................................................................2211.0010100000000
................GCGCCCGTCG---------GAAGGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
........................................................................................................................................................................................................................................................................................................................................................T---GCATTCTTGC--GGACCCGGC.................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................CTTGC--GGACCCGGCC-TGAAGCTCC......................................................................2411.0010001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAAA---------------------------------CAGCAAAATGAGCGCA..2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................CC-TGAAGCTCTACGCAAACT.............................................................2011.0010100000000
...............................................................................................................................................................................AAAGTTGACGGCGAATTTCTAAT............................................................................................................................................................................................................................................................2311.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................ATTCTTGC--GGACCCGGCC-TG.............................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................T---GCATTCTTGC--GGACCCGGCC-T..............................................................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................T---GCATTCTTGC--GGACCCGGCC-TGAAGCC........................................................................2811.0010001000000
.................................................................................................................................................................................................................................................................................................................................................................CTTGC--GGACCCGGCC-TGAAGCTC.......................................................................2311.0010001000000
........................................................................................................................................................................................................................................................................................................................................ACTCT-----------T---GCATTCTTGC--GGACC.....................................................................................2111.0010010000000
.................CGCCCGTCG---------GAAGGTCAGAAGAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
...............AGCGCCCGTCG---------GAAGGTCAGAAGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000010
................GCGCCCGTCG---------GAAGGTCAGAAGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
...............................................................................................................................................................................................................................................CCCGTATCGAAATTACC-GT...............................................................................................................................................................................................1911.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................AGCTCTACGCAAACTTCAGC........................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCACAAA---------------------------------CAGCAAAATGAGCGC...2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAA---------------------------------CAGCAAAATGAGCGCCCG2111.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGCACAAA---------------------------------CAGCAAAATGAGCGCCC.2611.0010001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAA---------------------------------CAGCAAAATGAGCGCCC.2111.0010000010000
.........................G---------GAAGGTCAGAAGAAGGTTAGC----......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.................CGCCCGTCG---------GAAGGTCAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T---------------------------------------------------------CTTAGCGA-----AATT--G------TAAGTAAAAGA-----------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCAACA------------------CTGCCCGTATCGAAATTACC-GTTTTCAACATCT-------------------------------------------AACTA---ACT--T-ACTCT-----------T---GCATTCTTGC--GGACCCGGCC-TGAAGCTCTACGCAAACTTCAGCACAGAC---------------------------------AGCAAAATGAGCGCCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAC---------------------------------AGCAAAATGAGCGCC..2312.002000002
...........................................................................................................................................................................................................................................................................................................................................CT-----------T---GCATTCTTGC--GGACCCGGCC-TGG............................................................................2612.002200000
............................................................................................................................................................................................................................................................................................................................TA---ACT--T-ACTCT-----------T---GCATTCTTG.............................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGCACAGAC---------------------------------AGCAAAA..........1811.001000010
............................................AAGAAGGTTAGC----AAACT---T---------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................1811.001001000
.....................................................................................................................................................................................................................................................................................................................................................................C--GGACCCGGCC-TGAAGCTCTACGCAAAC..............................................................2811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCACAGAC---------------------------------AGCAAAATGAGC.....2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACAGAC---------------------------------AGCAAAAT.........2011.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................AACTTCAGCACAGAC---------------------------------AGCA.............1911.001010000
...........................................................................................................................................................................................................................................................................................................................................CT-----------T---GCATTCTTGC--GGACCCGGC.................................................................................2211.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGCACAGAC---------------------------------AGCAAAATGAGCGCCC.2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCACAGAC---------------------------------AGCAAAA..........1911.001001000
.........................................CAGAAGAAGGTTAGC----AAACT---T---------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................2111.001001000
..........................................................................................................................................................................................................................................................ATTACC-GTTTTCAACATCT-------------------------------------------AACTA---.................................................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................GCACAGAC---------------------------------AGCAAAATGAGCG....2111.001000001
..............AAGCGCCCGTCG---------GAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................................................................................................................................................................................................CT-----------T---GCATTCTTGC--GGACCCGGCC-TGA............................................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................CTTGC--GGACCCGGCC-TGAAG..........................................................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................TTGC--GGACCCGGCC-TGAAGCT........................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................TTGC--GGACCCGGCC-TGAAGCTCTAC....................................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................ATTCTTGC--GGACCCGGCC-TGAAGCT........................................................................2511.001100000
.................CGCCCGTCG---------GAAGGTCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................GTAAAAGA-----------AAAAGTTGACG.........................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................CACAGAC---------------------------------AGCAAAATGAGC.....1911.001001000
droWil2
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGT----ACATC---AGTAGATTGCATTCGAGGTGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGCGGCGATTTTTCTATCAAATCTATC-T--AT---ATCTGTGCACATATAACAATTGCT--TATCAAAATTTCCAGTAATTGGAGTTT-------------------------------------------AACTA---TAT-TT-CCTTT-----------C---TTATTTTTC---CG-GCCGGCA-AATAGTTTTACGCAGACTTCAGTACAGAC---------------------------AA---CAGCAACATGAGCGGACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................CATC---AGTAGATTGCATTCGA..............................................................................................................................................................................................................................................................................................................................................................................2015.00500050
..............................................................ATC---AGTAGATTGCATTCGA..............................................................................................................................................................................................................................................................................................................................................................................1914.00400040
............................................................ACATC---AGTAGATTGCATTCGA..............................................................................................................................................................................................................................................................................................................................................................................2114.00410030
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTACAGAC---------------------------AA---CAGCAAC...........1913.00300030
..............................................................ATC---AGTAGATTGCATTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2013.00303000
................................................................................................................................................................................................................................................................................................................................................................................................AGACTTCAGTACAGAC---------------------------AA---CAGCAAC...........2513.00320010
............................................................................................................................................................................................................................................................................................................................................................................................................AGAC---------------------------AA---CAGCAACATGAGC.....1912.00200020
...........................................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGAC---------------------------.......................2112.00220000
.......................................................................AGATTGCATTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2312.00201001
................................................................C---AGTAGATTGCATTCGAGT............................................................................................................................................................................................................................................................................................................................................................................1912.00200020
.............................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------------------AA---CAGCAACATGAGC.....1812.00200020
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGAC---------------------------AA---CAGCA.............2612.00220000
.............................................................................................GTTTG---------------------------------CGA-----AA---------------------------------------TAGCGGCG......................................................................................................................................................................................................................................................................1812.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------AA---CAGCAACATGAGCGGAC.2012.00200020
.............................................................CATC---AGTAGATTGCATTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2112.00202000
..........................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGAC---------------------------.......................2212.00210010
.........................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGAC---------------------------.......................2312.00210010
....................................................................AGTAGATTGCATTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2611.00100001
........................................................................................................................................................................................................................................................................................................................................................................................................GTACAGAC---------------------------AA---CAGCAACATGAGCGG...2511.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................GTACAGAC---------------------------AA---CAGCAACA..........1811.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACAGAC---------------------------AA---CAGCAAC...........2011.00100001
.................................................................................................................................................................................................................................................................................................................................................................................................GACTTCAGTACAGAC---------------------------AA---CAGC..............2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................GTTTTACGCAGACTTCAGTAC......................................................2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGTACAGAC---------------------------AA---CAGCAACAT.........2411.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGTACAGAC---------------------------AA---CAGCAAC...........2211.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGAC---------------------------AA---C.................2411.00101000
.............................................................................................................................................................................................................ATC-T--AT---ATCTGTGCACATATAAC........................................................................................................................................................................................................................2311.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTAC......................................................1911.00110000
.....................................................................................GTGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGC..........................................................................................................................................................................................................................................................................2211.00100001
...................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGTACAGAC---------------------------AA---CAGCAACATGAGC.....2811.00100010
...................................................................................AGGTGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGCG.........................................................................................................................................................................................................................................................................2511.00100001
..........................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGAC---------------------------AA---CAGC..............2811.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------AA---CAGCAACATGAGCGGACG2111.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAGAC---------------------------AA---CAGCAACATGAGCGGAC.2511.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACA.....................................................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------------------AA---CAGCAACATGAGCG....1911.00100010
......................................................................................TGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGC..........................................................................................................................................................................................................................................................................2111.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGA...................................................2211.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGAC---------------------------AA---CA................2611.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................TACAGAC---------------------------AA---CAGCAACATGAGC.....2211.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACAGAC---------------------------AA---CAGCAACATGAGC.....2711.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAGAC---------------------------AA---CAGCAACATGAGCGGA..2411.00100100
....................................................................AGTAGATTGCATTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................2411.00100001
.........................................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGAC---------------------------AA---CA................2711.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACAGAC---------------------------AA---CAGCAACAT.........2311.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................TACAGAC---------------------------AA---CAGCAACATGAG......2111.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGAC---------------------------AA---CAGC..............2511.00100010
..............................................................ATC---AGTAGATTGCATTCG...............................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................GTACAGAC---------------------------AA---CAGCAACATGAGC.....2311.00100010
............................................................................GCATTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................CATC---AGTAGATTGCATTCGAGT............................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTACAGAC---------------------------AA---CAGCAACATGAGCG....2511.00100010
................................................................................TCGAGGTGGGTGTGTTTG---------------------------------CGA-----.......................................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................TTCGAGGTGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGC..........................................................................................................................................................................................................................................................................2811.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................GTACAGAC---------------------------AA---CAGCAACATGAGCGGAC.2711.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACAGAC---------------------------AA---CAGCAACATGAGC.....2111.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGA...................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGAC---------------------------AA---CAGCAAC...........2811.00110000
..........................................................................TTGCATTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTACAGAC---------------------------AA---CAGCAACATGAGCGGAC.2811.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGAC---------------------------AA---CA................2511.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTACAGAC---------------------------AA---CAGCAACATGAGCGGAC.2911.00100100
.........................................................................ATTGCATTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................................................................ATTGCATTCGAGGTGGGTGTGT...................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCAACATGAGCGGAC.1911.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................AGAC---------------------------AA---CAGCAACATGAGCGG...2111.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................GACTTCAGTACAGAC---------------------------AA---CAG...............2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------AA---CAGCAACATGAGCGG...1911.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACAGAC---------------------------AA---CAGCAAC...........2111.00100010
.................................................................................CGAGGTGGGTGTGTTTG---------------------------------CGA-----AA---------------------------------------TAGC..........................................................................................................................................................................................................................................................................2611.00100010
droVir3
TTCCTAAGCTTTTCAAGTGCCAATGGAAGACGTATGAAGGTCAGAAGAAGGTTAGT----ACATC---GTTTCATTACGTTCGAGGTGGGTGTGTTTA---------------GGCCAAGTAA----------AAC-------------CAAAATTAAAGCAA--A--T-AAATCATTTTTTACGGCGATTTATCAATCAA--AATTT-TGCAT-----T-----------------TAGT--TAACAAAATTATCAATTTGTAGCAGCT-------------------------------------------AAATT---AAT-GTT-TGGT------------------TTTTTCCACAC-TCCGGCG-TGCAGCTTTACGCGAATTTCAGTGCAGACTC---CGTTA------------------------AGAACATGGCAAACCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC---CGTTA------------------------AGAAC...........1814.004010000000000020000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCAGACTC---CGTTA------------------------AGAACATGGC......2713.003001000000000000001000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGACTC---CGTTA------------------------AGAACATGGC......2213.003001000000000000000000000000000000000000000000000000000000000020
....................................................................GTTTCATTACGTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................2412.002020000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC---CGTTA------------------------AGAACATGGCA.....2412.002001000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC---CGTTA------------------------................1912.002000000000000000002000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGACTC---CGTTA------------------------AGAACAT.........2212.002000000000000010001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTC---CGT..........................................2512.002000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCAGACTC---CGTTA------------------------AGAA............2112.002000000000000000011000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCAGACTC---CGTTA------------------------AGA.............2012.002000000000000000100000000000000000000000000000000000000000000010
............................................................................ACGTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................1812.002000000000010000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC---CGTTA------------------------AGAACAT.........2012.002000000000001001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTC---CGTT.........................................2612.002000000000000000000000000000000000000000000000000000000000000002
...................................................................................................................................................................................................................................................................................................................................................................TCCACAC-TCCGGCG-TGCAG..........................................................................1912.002000000000000000001000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCGAATTTCAGTGCAGACTC---CGT..........................................2412.002000000000000000001010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC---CGTTA------------------------A...............2112.002000000000000000001100000000000000000000000000000000000000000000
..........................................................................TTACGTTCGAGGTGGGTG......................................................................................................................................................................................................................................................................................................................................................................1812.002000001000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGT........................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...............................GTATGAAGGTCAGAAGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTCCACAC-TCCGGCG-TGCA...........................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTC---CGTTA------------------------AGAA............2711.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................GTGTGTTTA---------------GGCCAAGTAA----------A............................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................TGCAGACTC---CGTTA------------------------AGAACATGG.......2311.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGACTC---CGTTA------------------------AGAACATGGCAAA...2411.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGTGCAGA...................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC---CGTT.........................................1911.001000000000000000001000000000000000000000000000000000000000000000
............................................................................ACGTTCGAGGTGGGTGTGTT..................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAGACTC---CGTTA------------------------AGAACATGGC......2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGTGCA.....................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................TACGTTCGAGGTGGGTGT.....................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
................................................................................TCGAGGTGGGTGTGTTTA---------------G................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................C---CGTTA------------------------AGAACATGGCAAACC.2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC---CGT..........................................1911.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC---CGTTA------------------------A...............2211.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AATTTCAGTGCAGACTC---CGT..........................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................GTGGGTGTGTTTA---------------GGCCAAGTAA----------AAC-------------C............................................................................................................................................................................................................................................................................................................2711.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTC---CGTTA------------------------AGAACATGGCAAACC.2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................TTACGTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................................................................................................................................................................................................................AGACTC---CGTTA------------------------AGAACATGGCAA....2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTACGCGAATTTCAGTGCA.....................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC---CGTTA------------------------................2111.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC---CGTTA------------------------AGAAC...........2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC---CGTTA------------------------AGAA............2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AGCTTTACGCGAATTTCAGTG.......................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCAGACTC---CGTTA------------------------AGAACATGGCA.....2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTC---CGTTA------------------------................2711.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GACTC---CGTTA------------------------AGAACATGG.......1911.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC---CGTTA------------------------AGA.............2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC---CGTTA------------------------AGAACATGGCAAACC.2811.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC---CGTT.........................................1811.001000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................................................ATCATTTTTTACGGCGATTTAT................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................ATTACGTTCGAGGTGGGTGTGTTTA---------------.................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
......................................................................TTCATTACGTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC---CGTTA------------------------AGA.............2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC---CGTTA------------------------AGAACA..........1911.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTACGCGAATTTCAGTGCA.....................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC---CGTTA------------------------AGAACATGGC......2311.001001000000000000000000000000000000000000000000000000000000000000
.....................AATGGAAGACGTATGAAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................ATTACGTTCGAGGTGGGTGTG....................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGCAGACTC---CGTTA------------------------AGAACATG........2211.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC---CGTT.........................................2011.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTC---CGTTA------------------------A...............2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC---CGTTC------------------------................2011.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................AA--A--T-AAATCATTTTTTACGGCGAT....................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GACTC---CGTTA------------------------AGAACATGGCAA....2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AGCTTTACGCGAATTTCAGTGCA.....................................................2311.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAGACTC---CGTTA------------------------AGA.............1911.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTC---CGT..........................................2111.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................TTTCATTACGTTCGAGGTGGGTGT.....................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GT--TAACAAAATTATCAATTTGTAGCAGCT-------------------------------------------.........................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................ACATC---GTTTCATTACGTTCGAGGTGGG........................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CTTTACGCGAATTTCAGTGCAGACT.................................................2511.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGACTC---CGTTA------------------------AGAACAT.........1911.001000000000000000000000000000000000000000000000000000000000001000
...............................................................TC---GTTTCATTACGTTCGAG.............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
droMoj3
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACATTCGAGGTGGGTCTCTGTC---------------GTCCGTTTAAA-----TACGA-----A----------------TAAAAGTAAAAGTG----AACTTTTCCCGGCGATTTATTAATCAAAAT--TT-T------------AGCAT---------TTAC------------------TACCTAACACTC--------------------AAAATTTCTCTTATCCAATATTTTAATG---TT-TGAT-ATC--------------TCTTAC--------TT-TCCGGCG-TGCAGCTCTACGCGAACTTCTCCAAAGAC------ACCGT------CA---------------GCAACATGAGTGGCCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................ACATTCGAGGTGGGTCTCTGTC---------------.................................................................................................................................................................................................................................................................................................................................................2212.002000002
........................................................................GATTACATTCGAGGTGGGT.......................................................................................................................................................................................................................................................................................................................................................................1912.002100001
..............................................................................ATTCGAGGTGGGTCTCTG..................................................................................................................................................................................................................................................................................................................................................................1812.002001100
..............................................................................ATTCGAGGTGGGTCTCTGTC---------------GTCCG............................................................................................................................................................................................................................................................................................................................................2511.001000100
.........................................................................ATTACATTCGAGGTGGGTCTCT...................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GATTACATTCGAGGTGGGTCT.....................................................................................................................................................................................................................................................................................................................................................................2111.001000100
......................................................................TTGATTACATTCGAGGTGGGT.......................................................................................................................................................................................................................................................................................................................................................................2111.001000100
................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCTCCAAAGAC------ACCG........................................2011.001000001
...........................................................................TACATTCGAGGTGGGTCTCTGT.................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GATTACATTCGAGGTGGGTCTC....................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..........................................................................TTACATTCGAGGTGGGTCTCTGTC---------------.................................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................AGTACATC---ATTTGATTACATTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAAGAC------ACCGT------CA---------------GCAACA..........2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCGT------CA---------------GCAACATGAGTGGC..2011.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................C------ACCGT------CA---------------GCAACATGAGTGGC..2211.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCAAAGAC------ACCGT------CA---------------GC..............2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................TT-TCCGGCG-TGCAGCTCTACGC..................................................................2211.001100000
......................................................................................................................................................................................................................................................................................................................................AT-ATC--------------TCTTAC--------TT-TCCGGCG-TGC............................................................................2311.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGAC------ACCGT------CA---------------GCAACATGAGT.....2611.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................GAC------ACCGT------CA---------------GCAACATGAGTGGCC.2511.001100000
............................................................................ACATTCGAGGTGGGTCTCTG..................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGAC------ACCGT------CA---------------GCA.............1911.001100000
..............................................................................ATTCGAGGTGGGTCTCTGT.................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................ACATC---ATTTGATTACATTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................ATTACATTCGAGGTGGGTCTCTGT.................................................................................................................................................................................................................................................................................................................................................................2411.001001000
droGri2
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACGCTCGAGGTGGGTGCGTTTT---T------------------------TT-CAGCA-----A----------ATAAAGTAAAAGC------A----AAAATCAAGCGACGATTCATCAATCAAAACCTTT-TGCAT-----A-----------------TACT-----TAACAACATTATT-------------------------------------------------------ATTA---ACT-TT-AATA------------TATTCTGT--------TT-TGCGGTG-TGCAGCTCTTTGCGAATTTCAACACAGACTC---A---------------------------AACAACATGGCAAGCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................CGAATTTCAACACAGACTC---A---------------------------AA...............2211.00110
..............................................................ATC---ATTTGATTACGCTCGAG.............................................................................................................................................................................................................................................................................................................................................................................2011.00101
...............................................................................................................................................................................................................................................................................................................................................................................................CGAATTTCAACACAGACTC---A---------------------------.................2011.00110
...................................................................................................................................................................................................................................................................................................................................................................................................TTTCAACACAGACTC---A---------------------------AACAACAT.........2411.00110
.......................................................................................................................................................................................................................................................................................................................................................................................GCTCTTTGCGAATTTCAACAC......................................................2111.00101
..................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAACACAGACTC---A---------------------------AACAAC...........2311.00110

Generated: 05/18/2015 at 06:37 AM