ID:

dan_3182

 Coordinate:

scaffold_13340:20021653-20021733 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dana\GF16250-cds]; exon [dana_GLEANR_17520:2]; CDS [Dana\GF16250-cds]; exon [dana_GLEANR_17520:3]; intron [Dana\GF16250-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------##################################################
GTGCTCGACGCGCTCGAACTACTCGTGGGATATTGTCATCGAGAAAGTCGGTTAGTTTTTAACAAGATTTATATTTTTTTGGTATAATTTTTAACAAGAATGTTTAATTAATTAATTATATTGCTCGCCAGGCGAAAAGATCTTCATGGACAAGCGAGACCATACGGAATTCGACCTGCTG
**************************************************....((((((...((((.(((((((.....))))))).))))...))))))..............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V106
head
 V039
embryo
 V055
head
.....................................................................................................................................GAAAAGATCTTCATGGACAAGCGA........................ 24 0 1 6.00 6 1 0 5 0 0 0
...............................ATTGTCATCGAGAAAGTCGGC................................................................................................................................. 21 1 1 4.00 4 3 1 0 0 0 0
.............................ATATTGTCATCGAGAAAGTCGGC................................................................................................................................. 23 1 1 4.00 4 2 1 1 0 0 0
.......................................................................................................................................AAAGATCTTCATGGACAAGCGA........................ 22 0 1 2.00 2 0 2 0 0 0 0
........................................................................................................................................................AGCGAGACCATACGGAATTC......... 20 0 1 2.00 2 2 0 0 0 0 0
.......................CGTGGGATATTGTCATCGA........................................................................................................................................... 19 0 1 2.00 2 1 0 1 0 0 0
.....................................................................................................................................GAAAAGATCTTCATGGACAAGC.......................... 22 0 1 2.00 2 2 0 0 0 0 0
...............GAACTACTCGTGGGATATT................................................................................................................................................... 19 0 1 2.00 2 1 1 0 0 0 0
...............GAACTACTCGTGGGATATTGTC................................................................................................................................................ 22 0 1 2.00 2 1 0 1 0 0 0
...............GAACTACTCGTGGGATATTGTCA............................................................................................................................................... 23 0 1 2.00 2 0 0 0 2 0 0
.............................................................................................................................................................GACCATACGGAATTCGACCTGC.. 22 0 1 2.00 2 2 0 0 0 0 0
......GACGCGCTCGAACTACTCGT........................................................................................................................................................... 20 0 1 2.00 2 0 0 1 0 1 0
............................GATATTGTCATCGAGAAAGTC.................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
.................................................................................................................................CTCCGAAAAGATCTTCATGGAC.............................. 22 3 1 1.00 1 1 0 0 0 0 0
........................GTGGGATATTGTCATCGAGA......................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
.............TCGAACTACTCGTGGGAT...................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................CGGCGAAAAGATCTTCATGGACAAGCG......................... 27 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................GGCTATACGGAATTCGACCTGCT. 23 2 1 1.00 1 1 0 0 0 0 0
..........................GGGATATTGTCATTGAGAAAGTC.................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
........................GTGGGATATTGTCATCGAGAA........................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..................................GTCATCGAGAAAGTCGGC................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................GGACAAGCGAGACCATATGGAATT.......... 24 1 1 1.00 1 0 1 0 0 0 0
..............................TATTGTCATCGAGAAAGTCGGCGA............................................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................CGGCGAAAAGATCTTCATGGACAAGCGA........................ 28 1 1 1.00 1 0 1 0 0 0 0
.........GCGCTCGAACTACTCGTGGGATATTGTC................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
.......................CGTGGGATATTGTCATCGAGAAAGTC.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................AGATCTTCATGGACAAGCGA........................ 20 0 1 1.00 1 1 0 0 0 0 0
.....CGACGCGCTCGAACTACT.............................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................GCGAGACCATACGGAATTCGACC..... 23 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................GATCTTCATGGACAAGCGAGACCATA................. 26 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................GGACAAGCGAGACCATACGG.............. 20 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................GTCGGCGAAAAGATCTTCATGGACA............................. 25 3 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................AGATCTTCATGGACAAGCGAGACC.................... 24 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................CTTCATGGACAAGCGAGACC.................... 20 0 1 1.00 1 1 0 0 0 0 0
...........GCTCGAACTACTCGTGGGATATTGTCAT.............................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
..........................GGGATATTGTCATCGAGAAAGTCGGC................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................AAGATCTTCATGGACAAGCGA........................ 21 0 1 1.00 1 0 1 0 0 0 0
.....CGACGCGCTCGAACTACTCGTGG......................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.....CGACGCGCGCGAACTACTCGTGGGA....................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
...............GAACTACTCGTGGGATATTGT................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................................ATACGGAATTCGACCTGCT. 19 0 1 1.00 1 1 0 0 0 0 0
..........................GGGATATTGTCATCGATAAAGTCGGC................................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
................AACTACTCGTGGGATATTGTC................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................AAGATCTTCATGGACAAGC.......................... 19 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................GAAAAGATCTTCATCGACAAGCGA........................ 24 1 1 1.00 1 0 0 1 0 0 0
......GACGCGCTCGAACTACTCGTGG......................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................TCGGCGAAAAGATCTTCATGGACAA............................ 25 2 1 1.00 1 0 1 0 0 0 0
.............................ATATTGTCATCGAGAAAGTC.................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.........GCGCTCGAACTACTCGTGG......................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
......GACGCGCTCGAACTACTCGTG.......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..............CGAACTACTCGTGGGATATTGTC................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0
..............CGAACTACTCGTGGGATATTGTCATC............................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................CATGGACAAGCGAGACCATACGGA............. 24 0 1 1.00 1 0 1 0 0 0 0
.......................CTTGGGATATTGTCATCGAGAAAGTC.................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
.............................ATATTGTAATCGAGAAAGTCGGC................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................GATATTGTCATCGAGAAAGTCGGCGA............................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................GACAAGCGAGACCATACGG.............. 19 0 1 1.00 1 0 1 0 0 0 0
..................CTACTCGTGGGATATTGTC................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
..........................GTGATATTGTCATCGAGAAAGTC.................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................GGACAAGCGAGACCATACGGA............. 21 0 1 1.00 1 0 1 0 0 0 0
...........GCTCGAACTACTCGTGGGAT...................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
............................GGTATTGTCATCGAGAAAGTCGGC................................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................GACCATACGGAATTCGACCTGCTG 24 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................GTACAAGCGAGACCATACGGA............. 21 1 1 1.00 1 1 0 0 0 0 0
......GACGCGCTCGAACTACTCGTGGGAT...................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................AGCGAGACCATACGGAATTCGACCTG... 26 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................CATACGGAATTCGACCTGC.. 19 0 1 1.00 1 0 0 0 0 1 0
......................................................................................................................................................CAAGCGAGACCATACGGAATTC......... 22 0 1 1.00 1 1 0 0 0 0 0
.....CGACGCGCTCGAACTACTCGTGGG........................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................GAACATACGGAATTCGACCTGCT. 23 1 1 1.00 1 1 0 0 0 0 0
........................GTGGGATATTGTCATCGA........................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................GACCATACGGAATTCGACCTGCT. 23 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................GATCTTCATGGACAAGCGA........................ 19 0 1 1.00 1 0 0 1 0 0 0
..............CTAGCTACTCGTGGGATATTGTCATCGA........................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
..........CTCTCGAACTACTCGTGGGATATT................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.......ACGCGCTCCAACTACTCCTGGGAC...................................................................................................................................................... 24 3 2 0.50 1 1 0 0 0 0 0
.................................TGTCATCGAGAAAGTCGGCG................................................................................................................................ 20 2 2 0.50 1 0 0 0 1 0 0
...............................................................................................................................GTCGGCGAAAAGATCTTCATG................................. 21 3 3 0.33 1 1 0 0 0 0 0
...................................................................................ATAATTTTGAACGAGAATG............................................................................... 19 2 7 0.14 1 0 0 0 0 0 1
.....................................................................................................................................................ACAAGCTCGACCGTACGGA............. 19 3 18 0.06 1 0 0 1 0 0 0
......................................................GTTTTTAACAAGACTTGT............................................................................................................. 18 2 19 0.05 1 0 0 0 0 1 0
......................................................GTTTTTAACAAGAGTTTT............................................................................................................. 18 2 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

CACGAGCTGCGCGAGCTTGATGAGCACCCTATAACAGTAGCTCTTTCAGCCAATCAAAAATTGTTCTAAATATAAAAAAACCATATTAAAAATTGTTCTTACAAATTAATTAATTAATATAACGAGCGGTCCGCTTTTCTAGAAGTACCTGTTCGCTCTGGTATGCCTTAAGCTGGACGAC
**************************************************....((((((...((((.(((((((.....))))))).))))...))))))..............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:20021603-20021783 - dan_3182 GTGCTCGACGCGCTCGAACTACTCGTGGGATATTGTCATCGAGAAAGTCGGTTAGTTTT----------------------------------------------------------T---AACAAGATTTATA-----TTTTTTTGGTATAATT------TTTAACAAGAAT-----GTTTAA-------------------------------------------------------------------------------------------------------------TTAATTAATTA----TATT--------------GCTCGCCAGGCGAAAAGATCTTCATGGACAAGCGAGACCATACGGAATTCGACCTGCTG
droBip1 scf7180000396413:2374045-2374210 + GTGCTCGACACGCTCGAACTACTCTTGGGATATTGTCATCGAGAAAGTCGGTTAGTTAT----------------------------------------------------------TTAAAA------ATATT-----CT----------AT-C------A------ATCAGAAAATGTT-----------------------------------------------------------------------------------------------------------------TAATGAATCAATTTTAAT--------------CCTTAACAGGCGAAAAGATCTTCATGGACAAGCGAGACCATACGGAATTCGATCTGCTG
droKik1 scf7180000302639:3070457-3070632 - GTGCTCGACTCGCTCCAACTACTCCTGGGACATTGTCATCGAGAAAGTTGGTGGGTTGA----------------------------------------------------------ATA-----CAAAATAAGCCTCCT---------------------------------------------------------------------------------------------------------------------------AAATTAAGCCTTTGGTCTTA---ATAATACTAA-----------------TGTT---TTGTCTTTTGTTCAGGCGACAAGATTTTCATGGACAAGCGCGACCATACCGAGTTCGATCTTCTG
droFic1 scf7180000453906:305109-305355 - GTGCTCCACGCGATCGAACTACTCCTGGGACATTGTCATCGAGAAAGTCGGTAAGTGAA----------------------------------------------------------ATC------GCAAACAG---------------------------------------G-------AGATGTGTTTCTAAAGGGGAAACCTTTTTAGAAGTTATAATTATTAGAAGTTATAATTATTAATCTCTTTAGGGAGTTTTATAAGTTTACCTTCTGGTCATA---T-----ATAA-----------------TATC---CCATTTATTTCGCAGGGGACAAGATCTTCATGGACAAACGTGACCACACTGAGTTCGATCTGCTG
droEle1 scf7180000490967:51510-51609 + GTGCTGCACTCGCTCGAACTACTCCTGGGATGTGGTCATCGAGAAACTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGAAGGTGTTTTTGGACAAGAGGGACAACGCCCAGTTTGACCTACTC
droRho1 scf7180000779871:6569-6668 + GTGCTGCACTCGCTCGAACTACTCCTGGGATGTGGTCATCGAGAAGCTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTCAAGGTGTTCTTGGATAAAAGGGATAATGCCCAGTTCGATCTGCTC
droBia1 scf7180000302402:9789283-9789382 + GTGCTGCACTCGCTCGAACTACTCCTGGGACGTGGTCATCGAGAAGCTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAGGTGTTCCTGGACAAAAGGGACAACACACAATTCGATTTGCTG
droTak1 scf7180000415199:94809-94908 - GTGCTGCACTCGATCCAACTACTCCTGGGATGTGGTCATCGAGAAGCTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCAAGGTCTTCTTGGACAAAAGGGATAACACTCAGTTCGATTTGCTG
droEug1 scf7180000409798:888864-889070 - GTGCTCTACGCGATCGAACTACTCATGGGACATTGTCATCGAGAAAGTCGGTAAGTTTATTAGATATGTAGAAAGGTAGAAAGTTACTTAGTAGAGTAAAAAGTACTTATAGTTTACTG---------------------------------A-AAAGATA------TATTAAAATCA---------------------------------------------------------------------------------------------------------------------------AAACTGTAAAT---------------CTTTTTAGGCGACAAGATCTTCATGGACAAGCGCGACCACACCGAGTTTGACCTCCTG
dm3 chr3R:19506820-19506988 + GTGCTCTACGCGATCGAACTATTCCTGGGATATTGTCATCGAGAAAGTTGGTATGTTAA----------------------------------------------------------ATGAAATACGAAATATA-----AT----------AA-T------A------ATAAGA-------GAA-------------------------------------------------------------------------------------------------------------ATAAATAATAATTGTAACC--------------TTATTTTAGGCGACAAGGTGTTCATGGACAAGCGTGACCACACCGAGTTCGATCTGTTG
droSim2 3r:19057090-19057258 + GTGCTCTACGCGCTCGAACTATTCCTGGGATATTGTCATCGAGAAAGTTGGTATGTTTA----------------------------------------------------------ATAAAATACGAAATATA-----AT----------AA-T------A------ATAATA-------TAA-------------------------------------------------------------------------------------------------------------ATAAATAATAATTGTAACT--------------TTATTTTAGGTGACAAGGTCTTCATGGACAAGCGTGACCACACCGAGTTCGACCTGCTG
droSec2 scaffold_0:19864526-19864700 + GTGCTCTACGCGCTCGAACTATTCCTGGGATATTGTCATCGAGAAAGTTGGTATGTTTA----------------------------------------------------------ATGAAATACGAAATATA-----AT----------AA-T------AATAACAATAATA-------TAA-------------------------------------------------------------------------------------------------------------ATAAATAATAATTGTAACT--------------TTATTTTAGGTGACAAGGTCTTCATGGACAAGCGTGACCACACCGAGTTCGACCTGCTG
droYak3 3R:20403580-20403749 + GTGCTCCACGCGATCGAACTACTCTTGGGATATTGTCATCGAGAAAGTTGGTATGTTTA----------------------------------------------------------ATGAAATACGAAATCAG---------------------------------------C-------GGA-------------------------------------------------------------------------------------AGC------------GTTTTATCCAGAAATCATCATTTTAAAC--------------TTATTTTAGGCGACAAGATCTTCATGGATAAGCGCGACCACACCGAGTTCGACCTGCTG
droEre2 scaffold_4820:8537952-8538121 - GTGCTCCACACGATCGAACTACTCGTGGGATATTGTCATCGAGAAAGTTGGTATGTTGA----------------------------------------------------------ATGCAATGCGAAATCAG---------------------------------------A-------TAA-------------------------------------------------------------------------------------AGC------------GCTCTTACCAGAAATAATCATTTTACCT--------------TTATTTTAGGCGACAAGATCTTTATGGACAAGCGGGACCACACCGAGTTCGACCTGCTG
dp5 2:3008788-3008887 + GTGCTCGACGCGCTCCAACTACTCCTGGGACATTGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGACAAGATTTTCATGGACAAGCGTGATCATACGGAATTCGATTTGCTG
droPer2 scaffold_3:5575513-5575612 - GTGCTGCACTCGCTCTAACTACTCCTGGGATGTAGTCTTCGACAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAAGATATTTCTAGACAAACGCGACAACGCCCAGTTCGATTTACTG
droWil2 scf2_1100000004943:9075970-9076126 - GTGTTCGACGCGTTCCAATTACTCTTGGGATATTGTAATTGAGAAAGTTGGTAAGTTTA----------------------------------------------------------AGCCAAACGG-----ATTTTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAATTCTATAAATTCGTA--------------TAATTCTAGGTGATAAAATCTTCATGGACAAACGCGATCATACGGAGTTCGATTTGTTG
droVir3 scaffold_13047:15223332-15223494 - GTGCTCGACACGCTCCAACTACTCGTGGGATATTGTCATCGAAAAAGTTGGTAAGGGA-----------------------------------------------T-----------CTC------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCATAAAACTAAAGTGACTCTACTAACC--ATGCTTTTGTTTTATCGACAGGCGAGAAAATCTTCATGGACAAGCGCGATCATACGGAATTCGATTTGCTG
droMoj3 scaffold_6540:18701131-18701288 - GTGCTCAACGCGTTCCAACTACTCATGGGATATTGTGATTGAAAAAGTTGGTAAGGTA-----------------------------------------------T-----------ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTTATACCAAAAATAACTGTTCTAACC--ATACT---TT--GAACTACAGGAGAGAAGATTTTCATGGATAAACGTGACCATACCGAATTCGATTTGCTA
droGri2 scaffold_14830:4761492-4761663 + GTGCTCGACACGCTCCAACTACTCGTGGGATATTGTCATCGAAAAAGTTGGTAAGGCA-----------------------------------------------TCGATTACATATTA---------------------------------A-AAAAAAC------AATTGCAAATA----------------------------------------------------------------------------------------------------------------------AA-----CTAATACATCTATT---TTTTGTATTCGATAGGTGAGAAGATCTTCATGGACAAGCGCGATCATACGGAATTCGATTTGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GTGCTCGACGCGCTCGAACTACTCGTGGGATATTGTCATCGAGAAAGTCGGTTAGTTTT----------------------------------------------------------T---AACAAGATTTATA-----TTTTTTTGGTATAATT------TTTAACAAGAAT-----GTTTAA-------------------------------------------------------------------------------------------------------------TTAATTAATTA----TATT--------------GCTCGCCAGGCGAAAAGATCTTCATGGACAAGCGAGACCATACGGAATTCGACCTGCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................GAAAAGATCTTCATGGACAAGCGA........................2416.006010050
...............................ATTGTCATCGAGAAAGTCGGC.............................................................................................................................................................................................................................................................................................................................................2114.004130000
.............................ATATTGTCATCGAGAAAGTCGGC.............................................................................................................................................................................................................................................................................................................................................2314.004120010
...................................................................................................................................................................................................................................................................................................................................................AAAGATCTTCATGGACAAGCGA........................2212.002200000
....................................................................................................................................................................................................................................................................................................................................................................AGCGAGACCATACGGAATTC.........2012.002020000
.......................CGTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................1912.002010010
.................................................................................................................................................................................................................................................................................................................................................GAAAAGATCTTCATGGACAAGC..........................2212.002020000
...............GAACTACTCGTGGGATATT...............................................................................................................................................................................................................................................................................................................................................................1912.002110000
...............GAACTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2212.002010010
...............GAACTACTCGTGGGATATTGTCA...........................................................................................................................................................................................................................................................................................................................................................2312.002000002
.........................................................................................................................................................................................................................................................................................................................................................................GACCATACGGAATTCGACCTGC..2212.002020000
......GACGCGCTCGAACTACTCGT.......................................................................................................................................................................................................................................................................................................................................................................2012.002001010
............................GATATTGTCATCGAGAAAGTC................................................................................................................................................................................................................................................................................................................................................2112.002020000
........................GTGGGATATTGTCATCGAGA.....................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............TCGAACTACTCGTGGGAT..................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................GTGGGATATTGTCATCGAGAA....................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................................GTCATCGAGAAAGTCGGC.............................................................................................................................................................................................................................................................................................................................................1811.001100000
.........GCGCTCGAACTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2811.001100000
.......................CGTGGGATATTGTCATCGAGAAAGTC................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................AGATCTTCATGGACAAGCGA........................2011.001010000
.....CGACGCGCTCGAACTACT..........................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................................................................................................................................................................................................................................................................................................................................................................GCGAGACCATACGGAATTCGACC.....2311.001100000
......................................................................................................................................................................................................................................................................................................................................................GATCTTCATGGACAAGCGAGACCATA.................2611.001000010
...............................................................................................................................................................................................................................................................................................................................................................GGACAAGCGAGACCATACGG..............2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................AGATCTTCATGGACAAGCGAGACC....................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................CTTCATGGACAAGCGAGACC....................2011.001010000
...........GCTCGAACTACTCGTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2811.001100000
..........................GGGATATTGTCATCGAGAAAGTCGGC.............................................................................................................................................................................................................................................................................................................................................2611.001000010
....................................................................................................................................................................................................................................................................................................................................................AAGATCTTCATGGACAAGCGA........................2111.001100000
.....CGACGCGCTCGAACTACTCGTGG.....................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............GAACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2111.001000010
.............................................................................................................................................................................................................................................................................................................................................................................ATACGGAATTCGACCTGCT.1911.001010000
................AACTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................AAGATCTTCATGGACAAGC..........................1911.001010000
......GACGCGCTCGAACTACTCGTGG.....................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................ATATTGTCATCGAGAAAGTC................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........GCGCTCGAACTACTCGTGG.....................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......GACGCGCTCGAACTACTCGTG......................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............CGAACTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............CGAACTACTCGTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2611.001000010
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAGCGAGACCATACGGA.............2411.001100000
................................................................................................................................................................................................................................................................................................................................................................GACAAGCGAGACCATACGG..............1911.001100000
..................CTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................GGACAAGCGAGACCATACGGA.............2111.001100000
...........GCTCGAACTACTCGTGGGAT..................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................................GACCATACGGAATTCGACCTGCTG2411.001010000
......GACGCGCTCGAACTACTCGTGGGAT..................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................AGCGAGACCATACGGAATTCGACCTG...2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................CATACGGAATTCGACCTGC..1911.001001000
..................................................................................................................................................................................................................................................................................................................................................................CAAGCGAGACCATACGGAATTC.........2211.001010000
.....CGACGCGCTCGAACTACTCGTGGG....................................................................................................................................................................................................................................................................................................................................................................2411.001000010
........................GTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................1811.001000001
.........................................................................................................................................................................................................................................................................................................................................................................GACCATACGGAATTCGACCTGCT.2311.001010000
......................................................................................................................................................................................................................................................................................................................................................GATCTTCATGGACAAGCGA........................1911.001000010
.................................TGTCATCGAGAAAGTCGGCG............................................................................................................................................................................................................................................................................................................................................2020.501000001
droBip1
GTGCTCGACACGCTCGAACTACTCTTGGGATATTGTCATCGAGAAAGTCGGTTAGTTAT----------------------------------------------------------TTAAAA------ATATT-----CT----------AT-C------A------ATCAGAAAATGTT-----------------------------------------------------------------------------------------------------------------TAATGAATCAATTTTAAT--------------CCTTAACAGGCGAAAAGATCTTCATGGACAAGCGAGACCATACGGAATTCGATCTGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
GTGCTCGACTCGCTCCAACTACTCCTGGGACATTGTCATCGAGAAAGTTGGTGGGTTGA----------------------------------------------------------ATA-----CAAAATAAGCCTCCT---------------------------------------------------------------------------------------------------------------------------AAATTAAGCCTTTGGTCTTA---ATAATACTAA-----------------TGTT---TTGTCTTTTGTTCAGGCGACAAGATTTTCATGGACAAGCGCGACCATACCGAGTTCGATCTTCTGSizeHit CountTotal NormTotal
No Reads
droFic1
GTGCTCCACGCGATCGAACTACTCCTGGGACATTGTCATCGAGAAAGTCGGTAAGTGAA----------------------------------------------------------ATC------GCAAACAG---------------------------------------G-------AGATGTGTTTCTAAAGGGGAAACCTTTTTAGAAGTTATAATTATTAGAAGTTATAATTATTAATCTCTTTAGGGAGTTTTATAAGTTTACCTTCTGGTCATA---T-----ATAA-----------------TATC---CCATTTATTTCGCAGGGGACAAGATCTTCATGGACAAACGTGACCACACTGAGTTCGATCTGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
GTGCTGCACTCGCTCGAACTACTCCTGGGATGTGGTCATCGAGAAACTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGAAGGTGTTTTTGGACAAGAGGGACAACGCCCAGTTTGACCTACTCSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCTGCACTCGCTCGAACTACTCCTGGGATGTGGTCATCGAGAAGCTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTCAAGGTGTTCTTGGATAAAAGGGATAATGCCCAGTTCGATCTGCTCSizeHit CountTotal NormTotal
No Reads
droBia1
GTGCTGCACTCGCTCGAACTACTCCTGGGACGTGGTCATCGAGAAGCTGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAGGTGTTCCTGGACAAAAGGGACAACACACAATTCGATTTGCTGSizeHit CountTotal NormTotal
No Reads
droTak1
GTGCTGCACTCGATCCAACTACTCCTGGGATGTGGTCATCGAGAAGCTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCAAGGTCTTCTTGGACAAAAGGGATAACACTCAGTTCGATTTGCTGSizeHit CountTotal NormTotal
No Reads
droEug1
GTGCTCTACGCGATCGAACTACTCATGGGACATTGTCATCGAGAAAGTCGGTAAGTTTATTAGATATGTAGAAAGGTAGAAAGTTACTTAGTAGAGTAAAAAGTACTTATAGTTTACTG---------------------------------A-AAAGATA------TATTAAAATCA---------------------------------------------------------------------------------------------------------------------------AAACTGTAAAT---------------CTTTTTAGGCGACAAGATCTTCATGGACAAGCGCGACCACACCGAGTTTGACCTCCTGSizeHit CountTotal NormTotal
No Reads
dm3
GTGCTCTACGCGATCGAACTATTCCTGGGATATTGTCATCGAGAAAGTTGGTATGTTAA----------------------------------------------------------ATGAAATACGAAATATA-----AT----------AA-T------A------ATAAGA-------GAA-------------------------------------------------------------------------------------------------------------ATAAATAATAATTGTAACC--------------TTATTTTAGGCGACAAGGTGTTCATGGACAAGCGTGACCACACCGAGTTCGATCTGTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...CTCTACGCGATCGAACTATTC.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGCGATCGAACTATTCCTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCTCTACGCGATCGAACTATTCC........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGCGATCGAACTATTCCTGG.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................TATTCCTGGGATATTGTCATCG........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GTCATCGAGAAAGTTGG..............................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAACTATTCCTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCGTGACCACA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TGGACAAGCGTGACCACACCGAGTTC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...................TATTCCTGGGATATTGTCA...........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....TCTACGCGATCGAACTATTCCTGGGAT..................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTCTACGCGATCGAACTATTCCTGGGAT..................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATATTGTCATCGAGAAAGT.................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CGTGACCACACCGAGTTCGATCTGT..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AAGGTGTTCATGGACAAGC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CGACAAGGTGTTCATGGACAAGCG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAGCGTGACCACACCGAGTT..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TATTCCTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TACGCGATCGAACTATTCCTGGGATATT...............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTCCTGGGATATTGTCATCGAGAAAGTT................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................AACTATTCCTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TTCATGGACAAGCGTGAC.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTACGCGATCGAACTATTCCTGGGA...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAACTATTCCTGGGATATTGTCATCGAG......................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAGCGTGACCACAC................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTGCTCTACGCGATCGAACTATT..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....CTACGCGATCGAACTATTCCT.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............GAACTATTCCTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CGTGACCACACCGAGTTCGATCTG...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTGTCATCGAGAAAGTTG...............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AGGTGTTCATGGACAAGCGTGACC....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TTCATGGACAAGCGTGACCACA.................2211.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATTCCTGGGATATTGTCATCT........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAAGCGTGACCACACCGAGTTCCG.......2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GGTGTTCATGGACAAGCGTG.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................CTGGGATATTGTCATCGAGAAAGTTG...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCGTGACCACACCGA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TTCATGGACAAGCGTGACCACACCGA.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGGGATATTGTCATCGAGAAAGTTGG..............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCTCTACGCGATCGAACT.............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................GATATTGTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CGACAAGGTGTTCATGGACAAGCGT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTGTCATCGAGAAAGTTGG..............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGTTCATGGACAAGCGTGACCACACCGAG............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATATTGTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCGTGACCACACCGAGG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACTATTCCTGGGATATTGTCATCGC.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TATTTTAGGCGACAAGGTGTTC....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAAGCGTGACCACACCGAGT...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................T------A------ATAAGA-------GAA-------------------------------------------------------------------------------------------------------------ATAAATA.....................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTGCTCTACGCGCTCGAACTATTCCTGGGATATTGTCATCGAGAAAGTTGGTATGTTTA----------------------------------------------------------ATAAAATACGAAATATA-----AT----------AA-T------A------ATAATA-------TAA-------------------------------------------------------------------------------------------------------------ATAAATAATAATTGTAACT--------------TTATTTTAGGTGACAAGGTCTTCATGGACAAGCGTGACCACACCGAGTTCGACCTGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................TGGGATATTGTCATCGAGAAAGTTGG..............................................................................................................................................................................................................................................................................................................................................2617.00700000030010030000
..........................................................................................................................................................................................................................................................................................................................................................TTCATGGACAAGCGTGACCACACCGAGTT..........2911.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAGCGTGACCACACCGAGTT..........2711.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CTTCATGGACAAGCGTGACCG...................2111.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................TCTTCATGGACAAGCGTGACCACACCGA.............2811.00100000001000000000
.TGCTCTACGCGCTCGAACTATTCCTGGGA...................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................ACAAGGTCTTCATGGACAAGCGTGAC.....................2611.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................GACAAGCGTGACCACACCGAGTT..........2311.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................GACAAGGTCTTCATGGACA.............................1911.00101000000000000000
.........GCGCTCGAACTATTCCTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
......................TCCTGGGATATTGTCATCGAGAAAGT.................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
....................................CATCGAGAAAGTTGGTGAC..........................................................................................................................................................................................................................................................................................................................................19200.05100100000000000000
droSec2
GTGCTCTACGCGCTCGAACTATTCCTGGGATATTGTCATCGAGAAAGTTGGTATGTTTA----------------------------------------------------------ATGAAATACGAAATATA-----AT----------AA-T------AATAACAATAATA-------TAA-------------------------------------------------------------------------------------------------------------ATAAATAATAATTGTAACT--------------TTATTTTAGGTGACAAGGTCTTCATGGACAAGCGTGACCACACCGAGTTCGACCTGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............GAACTATTCCTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2212.0020020
.................................................................................................................................................................................................................................................................................................................................................................ACAAGCGTGACCACACCGAGTTCGA.......2511.0010001
..............CGAACTATTCCTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2311.0010001
.................................................................................................................................................................................................................................................................................................................................................GACAAGGTCTTCATGGACAAGCGT........................2411.0010010
...........................................................................................................................................................................................................................................................................................................................................................................CCACACCGAGTTCGACCTGC..2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................CAAGCGTGACCACACCGAGTTCG........2311.0010100
...................TATTCCTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................TCCTGGGATATTGTCATCGAGAAA...................................................................................................................................................................................................................................................................................................................................................2411.0010010
..................................................................................................................................................................................................................................................................................................................................................ACAAGGTCTTCATGGACAAGCGT........................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................................................CCACACCGAGTTCGACCTGCT.2111.0010010
droYak3
GTGCTCCACGCGATCGAACTACTCTTGGGATATTGTCATCGAGAAAGTTGGTATGTTTA----------------------------------------------------------ATGAAATACGAAATCAG---------------------------------------C-------GGA-------------------------------------------------------------------------------------AGC------------GTTTTATCCAGAAATCATCATTTTAAAC--------------TTATTTTAGGCGACAAGATCTTCATGGATAAGCGCGACCACACCGAGTTCGACCTGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............GAACTACTCTTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2113.00301000020000
................................................................................................................................................................................................................................................................................................................................................................GATAAGCGCGACCACACCGA.............2012.00201000010000
..................CTACTCTTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2212.00201100000000
................................TTGTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................2012.00200200000000
.............................................................................................................................................................................................................................................................................................................................................................ATGGATAAGCGCGACCACACCGAGTT..........2612.00200100010000
............................................................................................................................................................................................................................................................................................................................................................CATGGATAAGCGCGACCACACCGA.............2412.00201000010000
..............CGAACTACTCTTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
................................................................................................................................................................................................................................................................................................................................................................GATAAGCGCGACCACACCG..............1911.00100000010000
.................ACTACTCTTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................GTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...............................................................................................................................................................................................................................................................................................................................................GCGACAAGATCTTCATGGATAAGCGC........................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................GATCTTCATGGATAAGCGCGACCACACCGA.............3011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................ACACCGAGTTCGACCTGCT.1911.00100100000000
............................GATATTGTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............CGAACTACTCTTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............CGAACTACTCTTGGGATATT...............................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................CTTCATGGATAAGCGCGACC....................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................GATCTTCATGGATAAGCGCGAC.....................2211.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................GACCACACCGAGTTCGACCTGCT.2311.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................CTTCATGGATAAGCGCGAC.....................1911.00100000010000
...........GATCGAACTACTCTTGGGATATT...............................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...........GATCGAACTACTCTTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................CTTCATGGATAAGCGCGACCACACC...............2511.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................GGATAAGCGCGACCACACCGA.............2111.00100100000000
.................ACTACTCTTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............CGAACTACTCTTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.............................ATATTGTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................ATGGATAAGCGCGACCACACCGA.............2311.00101000000000
.........GCGATCGAACTACTCTTGGGAT..................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...........GATCGAACTACTCTTGGGA...................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....CCACGCGATCGAACTACTCTTGGGA...................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...CTCCACGCGATCGAACTACTCTTG......................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................ACTCTTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.................................................................................................................................................................................................................................................................................................................................................GACAAGATCTTCATGGATAAGCG.........................2311.00101000000000
.....CCACGCGATCGAACTACTCTTGGG....................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............CGAACTACTCTTGGGATATTGTCA...........................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................TGGATAAGCGCGACCACACCGAGC...........2411.00100100000000
...............GAACTACTCTTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
droEre2
GTGCTCCACACGATCGAACTACTCGTGGGATATTGTCATCGAGAAAGTTGGTATGTTGA----------------------------------------------------------ATGCAATGCGAAATCAG---------------------------------------A-------TAA-------------------------------------------------------------------------------------AGC------------GCTCTTACCAGAAATAATCATTTTACCT--------------TTATTTTAGGCGACAAGATCTTTATGGACAAGCGGGACCACACCGAGTTCGACCTGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................AGCGGGACCACACCGAGTTCGAC......2313.0030000003
....................ACTCGTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................2212.0020001100
............................................................................................................................................................................................................................................................................................................................................................TATGGACAAGCGGGACCACACCGAG............2511.0011000000
.............TCGAACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2311.0011000000
................AACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..............................................................................................................................................................................................................................................................................................................................................................TGGACAAGCGGGACCACACCG..............2111.0010001000
...........................................................................................................................................................................................................................................................................................................................................................TTATGGACAAGCGGGACCACACC...............2311.0010000100
...............GAACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..................CTACTCGTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................2411.0010000010
............ATCGAACTACTCGTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2811.0010000010
..GCTCCACACGATCGAACTACTCGTGGG....................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
....TCCACACGATCGAACTACTCGTGGG....................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..............CGAACTACTCGTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2511.0010000100
......................................................................................................................................................................................................................................................................................................................................................................CGGGACCACACCGAGTTCGACCTGCT.2611.0011000000
...............GAACTACTCGTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2411.0010001000
......................................................................................................................................................................................................................................................................................................................................................GATCTTTATGGACAAGCGG........................1911.0010000100
..................................GTCATCGAGAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................1811.0010001000
...............GAACTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............CGAACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.........................................................................................................................................................................................................................................................................................................................................................CTTTATGGACAAGCGGGACCACACCGA.............2711.0010000100
.................................................................................................................................................................................................................................................................................................................................................GACAAGATCTTTATGGACAAGC..........................2211.0010000010
............................................................................................................................................................................................................................................................................................................................................................TATGGACAAGCGGGACCACACCGAGTT..........2711.0011000000
.........................TGGGATATTGTCATCGAGAAAGTTGG..............................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCGGGACCACACCGAGT...........2511.0011000000
.......................CGTGGGATATTGTCATCGAGAA....................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................................AGATCTTTATGGACAAGCGG........................2011.0011000000
.......................CGTGGGATATTGTCATCGAG......................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..........................GGGATATTGTCATCGAGAAAGTTG...............................................................................................................................................................................................................................................................................................................................................2411.0010000100
dp5
GTGCTCGACGCGCTCCAACTACTCCTGGGACATTGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGACAAGATTTTCATGGACAAGCGTGATCATACGGAATTCGATTTGCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................GACATTGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC................................................2412.0020020000000
.................................................................................................................................................................................................................................................................................................................................................GACAAGATTTTCATGGACAAGCGTGATC....................2812.0020110000000
..................................GTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC................................................1812.0020200000000
.............TCCAACTACTCCTGGGACATTGT.............................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
......................................................................................................................................................................................................................................................................................................................................................GATTTTCATGGACAAGCGTGATC....................2311.0010010000000
.................................................................................................................................................................................................................................................................................................................................................GACAAGATTTTCATGGACAAGCGT........................2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................AAGATTTTCATGGACAAGC..........................1911.0010010000000
....................................CATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGC..............................................1811.0010100000000
.................................................G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGACAAGATTTTCATGGACAAGC..........................2511.0010010000000
..........................GGGACATTGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC................................................2611.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................AAGCGTGATCATACGGAATTCGA.......2311.0010000000001
...............................ATTGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC................................................2111.0010100000000
.............................ACATTGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC................................................2311.0010010000000
.................................................................................................................................................................................................................................................................................................................................................GACAAGATTTTCATGGACAAGC..........................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................CAAGATTTTCATGGACAAGC..........................2011.0010100000000
....................................CATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAC.............................................1911.0010100000000
.................................TGTCATCGAGAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.................................................1811.0010000000010
............................................................................................................................................................................................................................................................................................................................................................................CATACGGAATTCGATTTGCT.2011.0010010000000
.................................................................................................................................................................................................................................................................................................................................................GACAAGATTTTCATGGACAAGCGTGAT.....................2711.0010000001000
....................................................................................................................................................................................................................................................................................................................................................AAGATTTTCATGGACAAGCGTGATC....................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................TCATGGACAAGCGTGATC....................1811.0010100000000
............................GACATTGTCATCGAGAAAA..................................................................................................................................................................................................................................................................................................................................................1970.1410100000000
droPer2
GTGCTGCACTCGCTCTAACTACTCCTGGGATGTAGTCTTCGACAAGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAAGATATTTCTAGACAAACGCGACAACGCCCAGTTCGATTTACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GTGTTCGACGCGTTCCAATTACTCTTGGGATATTGTAATTGAGAAAGTTGGTAAGTTTA----------------------------------------------------------AGCCAAACGG-----ATTTTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAATTCTATAAATTCGTA--------------TAATTCTAGGTGATAAAATCTTCATGGACAAACGCGATCATACGGAGTTCGATTTGTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................ATTGTAATTGAGAAAGTTGGT.............................................................................................................................................................................................................................................................................................................................................2113.00300120
.............................................................................................................................................................................................................................................................................................................................................................................ATACGGAGTTCGATTTGTT.1913.00300030
.................................................................................................................................................................................................................................................................................................................................................GATAAAATCTTCATGGACAAACGC........................2413.00300030
............................GATATTGTAATTGAGAAAGTTGGT.............................................................................................................................................................................................................................................................................................................................................2412.00200110
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAACGCGATCATACGGA.............2412.00200020
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAACGCGATCATACGGAGTT..........2712.00210010
..........................GGGATATTGTAATTGAGAAAGTTGGT.............................................................................................................................................................................................................................................................................................................................................2611.00100010
..........................................................................................................................................................................................................................................................................................................................................................................ATCATACGGAGTTCGATTTGTT.2211.00100100
.....................CTCTTGGGATATTGTAATTGA.......................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................................................................................................................................................................................................................................................................................................................................................ATAAAATCTTCATGGACAAACGC........................2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................TTCATGGACAAACGCGATCATA.................2211.00100010
..................................................................................................................................................................................................................................................................................................................................................ATAAAATCTTCATGGACAAACGCGA......................2511.00100010
.........................................................................................................................................................................................................................................................................................................................................................................GATCATACGGAGTTCGATTTGTT.2311.00100100
.................................................................................................................................................................................................................................................................................................................................................GATAAAATCTTCATGGACAAA...........................2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................CATACGGAGTTCGATTTGTT.2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................CAAACGCGATCATACGGAGTT..........2111.00100010
.........GCGTTCCAATTACTCTTGG.....................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....CGACGCGTTCCAATTACTCT........................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...................................................................................................................................................................................................................................................................................................................................................................AAACGCGATCATACGGAGTTC.........2111.00110000
.........................TGGGATATTGTAATTGAGAAAGTTGGT.............................................................................................................................................................................................................................................................................................................................................2711.00100100
..............................TATTGTAATTGAGAAAGTTGGT.............................................................................................................................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................................................................................................................................................................AAACGCGATCATACGGAGTTCGATTTG...2711.00100010
..................................................................................................................................................................................................................................................................................................................................................................CAAACGCGATCATACGGAGTTCGATT.....2611.00100010
...........................................................................................................................................................................................................................................................................................................................................................................TCATACGGAGTTCGATTTGTT.2111.00100100
.................ATTACTCTTGGGATATTGTA............................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............................ATATTGTAATTGAGAAAGTTGGTG............................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
GTGCTCGACACGCTCCAACTACTCGTGGGATATTGTCATCGAAAAAGTTGGTAAGGGA-----------------------------------------------T-----------CTC------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCATAAAACTAAAGTGACTCTACTAACC--ATGCTTTTGTTTTATCGACAGGCGAGAAAATCTTCATGGACAAGCGCGATCATACGGAATTCGATTTGCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................AACTACTCGTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2414.004000100000000001100000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAAGCGCGATCATACGGAATT..........2112.002000100000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CATACGGAATTCGATTTGCT.2012.002001000000000000001000000000000000000000000000000000000000000000
.................ACTACTCGTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000100000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................ATACGGAATTCGATTTGCT.1912.002000000000000010000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................GATCATACGGAATTCGATTTGC..2212.002000000000200000000000000000000000000000000000000000000000000000
....................ACTCGTGGGATATTGTCATC.........................................................................................................................................................................................................................................................................................................................................................2012.002000000000000010100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CATGGACAAGCGCGATCATACGGA.............2412.002000000000000001000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AAATCTTCATGGACAAGCGC........................2011.001000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GAGAAAATCTTCATGGACAAGCGC........................2411.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GATCATACGGAATTCGATTTGCT.2311.001000000000000000001000000000000000000000000000000000000000000000
.................ACTACTCGTGGGATATTGTCATCG........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CATACGGAATTCGATTTGCTG2111.001001000000000000000000000000000000000000000000000000000000000000
GTGCTCGACACGCTCCAACTACTCGT.......................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
......................TCGTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
..........CGCTCCAACTACTCGTGGGAT..................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..GCTCGACACGCTCCAACTACTCGTGGG....................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............CAACTACTCGTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.................ACTACTCGTGGGATATTGTC............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
........................GTGGGATATTGTCATCGAAA.....................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
...CTCGACACGCTCCAACTACTCGTGGG....................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
................AACTACTCGTGGGATATTGTCAT..........................................................................................................................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
.....CGACACGCTCCAACTACTCGT.......................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
........................GTGGGATATTGTCATCGAAAAA...................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
........................GTGGGATATTGTCATCGAA......................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..........................GGGATATTGTCATCGAAAAAGTTGGC.............................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAAGCGCGATCATACGGAATTCGATT.....2611.001000000000000000001000000000000000000000000000000000000000000000
..........................GGGATATTGTCATCGAAAAAGTTGGCG............................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GACAAGCGCGATCATACGGAATTC.........2411.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATCTTCATGGACAAGCGCGATC....................2211.001000000000000000000000000000000001000000000000000000000000000000
...............CAACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AAATCTTCATGGACAAGCGCGATCA...................2511.001001000000000000000000000000000000000000000000000000000000000000
..................CTACTCGTGGGATATTGTCATCG........................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACAAGCGCGATCATACGGA.............1911.001000000000000000001000000000000000000000000000000000000000000000
......GACACGCTCCAACTACTCG........................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TCATGGACAAGCGCGATCA...................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GGCGAGAAAATCTTCATGGACAA............................2311.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCGCGATCATACGGAATTCGATTTGCT.2711.001000000000000000001000000000000000000000000000000000000000000000
..............CCAACTACTCGTGGGATATTGT.............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
..GCTCGACACGCTCCAACT.............................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCGATCATACGGAATTCG........1811.001000000010000000000000000000000000000000000000000000000000000000
........................GTGGGATATTGTCATCGA.......................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
GTGCTCAACGCGTTCCAACTACTCATGGGATATTGTGATTGAAAAAGTTGGTAAGGTA-----------------------------------------------T-----------ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTTATACCAAAAATAACTGTTCTAACC--ATACT---TT--GAACTACAGGAGAGAAGATTTTCATGGATAAACGTGACCATACCGAATTCGATTTGCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................AACTACTCATGGGATATTGTGATT.........................................................................................................................................................................................................................................................................................................................................................2412.002100001
.............................................................................................................................................................................................................................................................................................................................................................ATGGATAAACGTGACCATACC...............2111.001100000
........................ATGGGATATTGTGATTGAAAAAGTTGG..............................................................................................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................................TTTTCATGGATAAACGTGACCATACC...............2611.001100000
.............................................................................................................................................................................................................................................................................................................................................................ATGGATAAACGTGACCATACCGAATTC.........2711.001100000
............................................................................................................................................................................................................................................................................................................................................................CATGGATAAACGTGACCATACC...............2211.001100000
droGri2
GTGCTCGACACGCTCCAACTACTCGTGGGATATTGTCATCGAAAAAGTTGGTAAGGCA-----------------------------------------------TCGATTACATATTA---------------------------------A-AAAAAAC------AATTGCAAATA----------------------------------------------------------------------------------------------------------------------AA-----CTAATACATCTATT---TTTTGTATTCGATAGGTGAGAAGATCTTCATGGACAAGCGCGATCATACGGAATTCGATTTGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................TACTCGTGGGATATTGTCATCGAA......................................................................................................................................................................................................................................................................................................................................................2411.00110
....................................................................................................................................................................................................................................................................................................................................................AAGATCTTCATGGACAAGCGCGATCA...................2611.00101
...............................................................................................................................................................................................................................................................................................................................................GTGAGAAGATCTTCATGGACA.............................2111.00101
..........................................................................................................................................................................................................................................................................................................................................................TTCATGGACAAGCGCGATCA...................2011.00101
....................................................................................................................................................................................................................................................................................................................................................AAGATCTTCATGGACAAGCGC........................2111.00101
..............CCAACTACTCGTGGGATATT...............................................................................................................................................................................................................................................................................................................................................................2011.00101
.................................................................................................................................................................................................................................................................................................................................................GAGAAGATCTTCATGGACA.............................1911.00101

Generated: 05/18/2015 at 06:33 AM