ID:

dan_3143

 Coordinate:

scaffold_13340:17421426-17421483 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.9 -3.6 -3.4

Flybase annnotation

CDS [Dana\GF18588-cds]; exon [dana_GLEANR_19846:3]; exon [dana_GLEANR_19846:2]; CDS [Dana\GF18588-cds]; intron [Dana\GF18588-in]

No Repeatable elements found

mature
  1. scaffold_2050:1192-1217 -
  2. scaffold_2050:1382-1407 -
  3. scaffold_2051:930-955 -
  4. dan_900  scaffold_12943:965172-965197 +
  5. dan_901  scaffold_12943:965299-965324 +
  6. dan_3143  scaffold_13340:17421437-17421462 +
star

Sense Strand Reads

##################################################----------------------------------------------------------##################################################
CTGCGCCGCCATCTTATGGTGTGCCACCGCCACAGCAGGCTCCATTGCAGGTAAGCCATCCCACACACCAAACTAGAGGCTCTTACTTACTCACTTTTTCATCGGCAGATTCCTCCACACTGCATCGAGCTGTTATCCTTCCTTGAGTCCGACCTGCC
**************************************************...((((.((...............))))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
...........................................ATTGCAGGTAAGCCATCCCACACACC......................................................................................... 26 0 6 3.33 20 11 9 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCC............................................. 26 0 3 2.00 6 3 3 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACA............................................................................................. 22 0 6 1.83 11 10 1 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACA........................................................................................... 24 0 6 1.83 11 11 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACAC.......................................................................................... 25 0 6 1.83 11 9 2 0 0 0
...........................................ATTGCAGGTAAGCCATCCCAC.............................................................................................. 21 0 6 1.83 11 1 8 2 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACT....................................................................... 26 0 6 1.67 10 10 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCC................................................................................................ 23 0 6 1.67 10 5 5 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCC................................................................................................. 22 0 6 1.50 9 3 6 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCT........................................................................... 26 0 6 1.33 8 8 0 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATT............................................... 24 0 3 1.33 4 3 1 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGAT................................................ 24 0 3 1.33 4 2 1 0 1 0
...........................................ATTGCAGGTAAGCCATCCCACAC............................................................................................ 23 0 6 1.33 8 5 3 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCCA............................................................................................... 24 0 6 1.33 8 7 1 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTC............................................................................ 25 0 6 1.17 7 4 3 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGATTC.............................................. 26 0 3 1.00 3 3 0 0 0 0
..............TATGGTGTGCCACCGCCACAGCAGGC...................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
...............................................................................CTCTTACTTACTCACTTTTTCATCGG..................................................... 26 0 3 1.00 3 3 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGG........................................................................................................... 24 0 6 1.00 6 6 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCT............................................................................. 24 0 6 1.00 6 3 3 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGA................................................. 23 0 3 1.00 3 1 2 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTT.......................................................................... 23 0 6 1.00 6 5 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCT........................................................................... 25 0 6 1.00 6 6 0 0 0 0
................TGGTGTGCCACCGCCACAGCAGGCTC.................................................................................................................... 26 0 2 1.00 2 1 1 0 0 0
.....................TGCCACCGCCACAGCAGGCTCCATT................................................................................................................ 25 0 4 0.75 3 3 0 0 0 0
.....................TGCCACCGCCACAGCAGGCTCCAT................................................................................................................. 24 0 4 0.75 3 2 1 0 0 0
...................................................................................TACTTACTCACTTTTTCATCGGCAGAT................................................ 27 0 3 0.67 2 1 1 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTC.............................................. 25 0 3 0.67 2 2 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACCA........................................................................................ 27 0 6 0.67 4 4 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGG............................................................................... 22 0 6 0.67 4 2 2 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGA................................................. 22 0 3 0.67 2 1 1 0 0 0
.......................................CTCCATTGCAGGTAAGCCATC.................................................................................................. 21 0 6 0.67 4 2 1 1 0 0
............................................................CCACACACCAAACTAGAGGCTCTTACT....................................................................... 27 0 6 0.67 4 4 0 0 0 0
...................................................................................TACTTACTCACTTTTTCATCGGCAGA................................................. 26 0 3 0.67 2 1 1 0 0 0
...........................................ATTGCAGGTAAGCCATCCC................................................................................................ 19 0 6 0.67 4 0 2 2 0 0
...........................CGCCACAGCAGGCTCCATTGC.............................................................................................................. 21 0 20 0.55 11 11 0 0 0 0
..........................CCGCCACAGCAGGCTCCATTGC.............................................................................................................. 22 0 20 0.55 11 0 11 0 0 0
...................TGTGCCACCGCCACAGCAGGCTCCATTGC.............................................................................................................. 29 0 2 0.50 1 1 0 0 0 0
........................CACCGCCACAGCAGGCTCCATTGC.............................................................................................................. 24 0 4 0.50 2 0 2 0 0 0
..............TATGGTGTTCCACCGCCACAGCAGGCTC.................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
.....................TGCCACCGCCACAGCAGGCTCCATTGC.............................................................................................................. 27 0 4 0.50 2 2 0 0 0 0
..............TATGGTGTGCCACCGCCACAGCAGG....................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACCAA....................................................................................... 28 0 6 0.50 3 3 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCCACA............................................................................................. 26 0 6 0.50 3 3 0 0 0 0
............................................TTGCAGGTAAGCCATCCCACACACC......................................................................................... 25 0 6 0.50 3 1 2 0 0 0
...................TGTGCCACCGCCACAGCAGGCTCC................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
.......................................CGCCATTGCAGGTAAGCCATC.................................................................................................. 21 1 6 0.50 3 0 3 0 0 0
........................................TCCATTGCAGGTAAGCCATCCCACAC............................................................................................ 26 0 6 0.50 3 1 2 0 0 0
..............TATGGTGTGCCACCGCCACAGCAGGCTC.................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.....................................................AGCCATCCCACACACCAAACTAGAGGC.............................................................................. 27 0 6 0.50 3 1 2 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAG............................................................................................................ 23 0 6 0.50 3 2 1 0 0 0
...........TCTTATGGTGTGCCACCGCCACAGCAGG....................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0
.............TTATGGTGTGCCACCGCCACAGCAGG....................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
............................................TTGCAGGTAAGCCATCCCACACA........................................................................................... 23 0 6 0.50 3 3 0 0 0 0
....................GTGCCACCGCCACAGCGTG....................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0
.............TTATGGTGTGCCACCGCCACAGCAGGC...................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
..............TATGGTGTGCCACCGCCACAGCAGGCTT.................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
...........TCTTATGGTGTGCCACCGCCACAGCAGGC...................................................................................................................... 29 0 2 0.50 1 0 1 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTTA......................................................................... 27 0 6 0.50 3 3 0 0 0 0
.....................TGCCACCGCCACAGCAGGCTCC................................................................................................................... 22 0 4 0.50 2 2 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAGC...................................................................................................... 26 0 6 0.33 2 1 1 0 0 0
........................................................................................ACTCACTTTTTCATCGGCAGATTCC............................................. 25 0 3 0.33 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTCT........................................................................... 22 0 6 0.33 2 2 0 0 0 0
...........TCTTATGGTGTGCCACCGCCA.............................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0
..................................................................................TGATTTACTCACTTTTTCATCGGC.................................................... 24 2 3 0.33 1 0 1 0 0 0
...........................................ATTGCAGGTAAGCCATCC................................................................................................. 18 0 6 0.33 2 0 2 0 0 0
.................................................................................CTTACTTACTCACTTTTTCATCGGCA................................................... 26 0 3 0.33 1 1 0 0 0 0
..........AGCCTATGGTGTGCCACCGCC............................................................................................................................... 21 2 3 0.33 1 0 1 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGATTCC............................................. 27 0 3 0.33 1 1 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGG..................................................... 23 0 3 0.33 1 0 1 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGC.............................................................................. 23 0 6 0.33 2 1 1 0 0 0
..........................................CATTGCAGGTAAGCCATCCC................................................................................................ 20 0 6 0.33 2 0 2 0 0 0
...................................................TAAGCCATCCCACACACCAAACTAGAGG............................................................................... 28 0 6 0.33 2 0 2 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGAT................................................ 23 0 3 0.33 1 1 0 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTTAC........................................................................ 24 0 6 0.33 2 2 0 0 0 0
...................................................................................TACTTACTCACTTTTTCATCGGC.................................................... 23 0 3 0.33 1 0 1 0 0 0
..................................................................................TGACTTACTCACTTTTTCATCGG..................................................... 23 1 3 0.33 1 0 1 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGGC.................................................... 24 0 3 0.33 1 1 0 0 0 0
...........................................AGTGCAGGTAAGCCATCC................................................................................................. 18 1 6 0.33 2 0 2 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACTTA..................................................................... 28 0 6 0.33 2 2 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGGCA................................................... 25 0 3 0.33 1 1 0 0 0 0
......................................................................................TGACTCACTTTTTCATCGGCAGAT................................................ 24 1 3 0.33 1 0 1 0 0 0
..............................................................................GCTCTTACTTACTCACTTTTTCATCGG..................................................... 27 0 3 0.33 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTTA......................................................................... 28 0 6 0.33 2 2 0 0 0 0
...........................................AGTGCAGGTAAGCCATCCCACAC............................................................................................ 23 1 6 0.33 2 0 2 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAG....................................................................................................... 25 0 6 0.33 2 2 0 0 0 0
.................................................................CACCAAACTAGAGGCTCTTACTTAC.................................................................... 25 0 6 0.33 2 2 0 0 0 0
.......................................................................................TACTCACTTTTTCATCGGCAGATTCCAC........................................... 28 1 3 0.33 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTAC........................................................................ 25 0 6 0.33 2 2 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTC............................................................................ 21 0 6 0.33 2 2 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGTA......................................................................................................... 26 0 6 0.33 2 2 0 0 0 0
......................................................................................TTACTCACTTTTTCATCGGCAGATT............................................... 25 0 3 0.33 1 1 0 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTTACTA...................................................................... 26 1 6 0.33 2 2 0 0 0 0
............................GCCACAGCAGGCTCCATTGCAGG........................................................................................................... 23 0 6 0.33 2 2 0 0 0 0
..................................................................................TTACTTACTCACTTTTTCATCGGCAGA................................................. 27 0 3 0.33 1 1 0 0 0 0
......................................................................................TGACTCACTTTTTCATCGGCAGATTCC............................................. 27 1 3 0.33 1 0 1 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTTA......................................................................... 25 0 6 0.33 2 1 1 0 0 0
......................GCCACCGCCACAGCAGGCTCCATT................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0
....................CTGCCACCGCCACAGCAGGCTCCATTGC.............................................................................................................. 28 1 4 0.25 1 0 1 0 0 0
.....................TGACACCGCCACAGCAGGCTCC................................................................................................................... 22 1 4 0.25 1 0 1 0 0 0
........................CACCGCCAGAGCAGGCTCCATT................................................................................................................ 22 1 4 0.25 1 1 0 0 0 0
.....................TGCCACCGCCACAGCAGGCTCCAG................................................................................................................. 24 1 4 0.25 1 1 0 0 0 0
.....................TGCCACCGCCACAGCAGGCTCCATTG............................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
.......................CCACCGCCGCAGCAGGCTCCATT................................................................................................................ 23 1 4 0.25 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTA......................................................................................................... 23 0 6 0.17 1 1 0 0 0 0
..............................................GCAGGTAAGCCATCCCACACACCAA....................................................................................... 25 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACGCACCA........................................................................................ 27 1 6 0.17 1 1 0 0 0 0
...........................CGCCACAGGAGGCTCCATTGCAGGTAT........................................................................................................ 27 2 6 0.17 1 1 0 0 0 0
.......................................CGACATTGCAGGTAAGCCATC.................................................................................................. 21 2 6 0.17 1 0 1 0 0 0
.......................................................CGATCCCACACACCAAACTAGAGGCC............................................................................. 26 2 6 0.17 1 0 1 0 0 0
...........................................................CCCACACACCAAACTAGAGGCTCT........................................................................... 24 0 6 0.17 1 1 0 0 0 0
.............................CCACAGCAGGCTCCATTGCAGGTA......................................................................................................... 24 0 6 0.17 1 1 0 0 0 0
.......................................GTCCATTGCAGGTAAGCCATCCC................................................................................................ 23 1 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGCAAGCCATCCCACACACCAAA...................................................................................... 29 1 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCACACACA......................................................................................... 26 1 6 0.17 1 1 0 0 0 0
...............................................CAGGTAAGCCATCCCACACACCAAACT.................................................................................... 27 0 6 0.17 1 1 0 0 0 0
...........................................................CCCACACACCAAACTAGAGGCTCTT.......................................................................... 25 0 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTT.......................................................................... 24 0 6 0.17 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGT.......................................................................................................... 25 0 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGG............................................................................... 19 0 6 0.17 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAGCC..................................................................................................... 27 0 6 0.17 1 0 1 0 0 0
............................................................CCACACACCAAACTAGAGGCTCTTACTT...................................................................... 28 0 6 0.17 1 1 0 0 0 0
...........................................................CCCACACACCAAACTAGAGGCTCTTACT....................................................................... 28 0 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACGCCAAACTAGAGGCTCT........................................................................... 25 1 6 0.17 1 1 0 0 0 0
............................GCCACAGCAGGCTCCATTGCAT............................................................................................................ 22 1 6 0.17 1 1 0 0 0 0
............................GCCACAGCAGGCTCCATTGCAGGTAAG....................................................................................................... 27 0 6 0.17 1 0 1 0 0 0
.........................................CCATTGCAGGTAAGCCATCCCA............................................................................................... 22 0 6 0.17 1 1 0 0 0 0
..............................................GCAGGTAAGCCATCCCACACACC......................................................................................... 23 0 6 0.17 1 0 1 0 0 0
.........................................CCATTGCAGGCAAGCCATCCCACACAC.......................................................................................... 27 1 6 0.17 1 1 0 0 0 0
.............................................TGCAGGTAAGCCATCCCACACACCAA....................................................................................... 26 0 6 0.17 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACA....................................................................... 26 1 6 0.17 1 1 0 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTT.......................................................................... 22 0 6 0.17 1 1 0 0 0 0
.............................................TGCAGGTAAGCCATCCCACACACC......................................................................................... 24 0 6 0.17 1 1 0 0 0 0
.............................................................CAAACACCAACCTAGAGGCTCT........................................................................... 22 2 6 0.17 1 0 1 0 0 0
.........................................................ATCTCACACACCAAACTAGAGGCC............................................................................. 24 2 6 0.17 1 0 1 0 0 0
...........................CGCCACAGTAGGCTCCATTGCAGGT.......................................................................................................... 25 1 6 0.17 1 1 0 0 0 0
...........................CGCCACAGGAGGCTCCATTGCAGGTAA........................................................................................................ 27 1 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGGAAGCCATCCCACACA........................................................................................... 24 1 6 0.17 1 1 0 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCCCACAC............................................................................................ 27 0 6 0.17 1 1 0 0 0 0
..........................................AATTGCAGGTAAGCCATCCCACACACC......................................................................................... 27 1 6 0.17 1 1 0 0 0 0
...............................................................CACACCAAACTAGAGGCTCTTAA........................................................................ 23 1 6 0.17 1 0 0 1 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTTAC........................................................................ 29 0 6 0.17 1 1 0 0 0 0
............................................TTGCAGGGAAGCCATCCCACAC............................................................................................ 22 1 6 0.17 1 0 0 1 0 0
...........................................ATTGCAGGGAAGGCATCCCACACACC......................................................................................... 26 2 6 0.17 1 1 0 0 0 0
..........................................CATTGCAGGTAAGCCATCCCACACA........................................................................................... 25 0 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACACCAAACTAGAGGC.............................................................................. 22 0 6 0.17 1 1 0 0 0 0
...........................CTCCACAGCAGGCTCCATTGCAGGT.......................................................................................................... 25 1 6 0.17 1 0 1 0 0 0
.......................................CGCCATTGCAGGTAAGCCATCC................................................................................................. 22 1 6 0.17 1 0 1 0 0 0
.......................................CTCCATTGCAGGTAAGCCATCACAC.............................................................................................. 25 1 6 0.17 1 1 0 0 0 0
..................................................................ACCAAACTAGAGGCTCTTACTTAC.................................................................... 24 0 6 0.17 1 0 1 0 0 0
.........................................CCATTGCAGGTAAGCCATCCCACACAC.......................................................................................... 27 0 6 0.17 1 1 0 0 0 0
..........................................................TCCTACACACCAAACTAGAGGC.............................................................................. 22 1 6 0.17 1 0 1 0 0 0
..........................................CATTGCAGGTAAGCCATCCCACACACC......................................................................................... 27 0 6 0.17 1 0 1 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTA.......................................................................... 27 1 6 0.17 1 1 0 0 0 0
..............................CACAGCAGGCTCCATTGCAGGTAAGCCA.................................................................................................... 28 0 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTTACT....................................................................... 29 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGTAAGCCATCCCA............................................................................................... 20 0 6 0.17 1 0 0 0 1 0
............................................................CCACACACCAAACTAGAGGCTCTTAG........................................................................ 26 1 6 0.17 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTCTT.......................................................................... 27 0 6 0.17 1 1 0 0 0 0
.........................................................ATCTCACACACCAAACTAGAGGCT............................................................................. 24 1 6 0.17 1 0 1 0 0 0
.......................................CGCTATTGCAGGTAAGCCATCC................................................................................................. 22 2 6 0.17 1 0 1 0 0 0
............................................................CCACACACTAAACTAGAGGCTCTTA......................................................................... 25 1 6 0.17 1 1 0 0 0 0
............................GCCACAGCAGGCTCCATTGCAGGTAA........................................................................................................ 26 0 6 0.17 1 1 0 0 0 0
............................................TTGCAGGAAAGCCATCCCACACACC......................................................................................... 25 1 6 0.17 1 0 1 0 0 0
..............................CACAGCAGGCTCCATTGCAGG........................................................................................................... 21 0 6 0.17 1 1 0 0 0 0
.......................................................CCATCCCAGACACCAAACTAGAGGCTCT........................................................................... 28 1 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGC.............................................................................. 20 0 6 0.17 1 0 0 0 1 0
..........................................................TCCCACACACCAAACTAGAGGCTCTT.......................................................................... 26 0 6 0.17 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGTT......................................................................................................... 26 1 6 0.17 1 1 0 0 0 0
.................................................................CACCAAACTAGAGGCTCTTACT....................................................................... 22 0 6 0.17 1 1 0 0 0 0
...........................................ATCGCAGGTAAGCCATCCCACAC............................................................................................ 23 1 6 0.17 1 0 1 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTA......................................................................... 24 0 6 0.17 1 0 1 0 0 0
..............................................................ACACACCAGACTAGAGGCTCTT.......................................................................... 22 1 6 0.17 1 1 0 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGT........................................................................................................... 24 1 6 0.17 1 1 0 0 0 0
...........................CGCCACAGGAGGCTCCATTGCAGGT.......................................................................................................... 25 1 6 0.17 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAG................................................................................ 21 0 6 0.17 1 1 0 0 0 0
..............................CACAGCAGCCTCCATTGCAGGTA......................................................................................................... 23 1 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTC............................................................................ 24 0 6 0.17 1 1 0 0 0 0
.........................................................ATCTCACACACCAAACTAGAGGCTC............................................................................ 25 1 6 0.17 1 0 1 0 0 0
...............................................CAGGTAAGCCATCCCACACACC......................................................................................... 22 0 6 0.17 1 0 1 0 0 0
...........................CGCCACAGCAGGCTCCATTGCAGGATT........................................................................................................ 27 3 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACACCAAACGAGAGGCTCTTACT....................................................................... 29 1 6 0.17 1 1 0 0 0 0
.............................................................CACACACCAAACTAGAGGCTCTTACTTAC.................................................................... 29 0 6 0.17 1 0 1 0 0 0
.......................................CTCCATTGCAGGTAAGCCTTCAC................................................................................................ 23 2 6 0.17 1 0 1 0 0 0
........................................................CATCCCACACACCAAACTAGAGGCT............................................................................. 25 0 6 0.17 1 0 1 0 0 0
...........................................ATTGCAGGTAAGCCATACCACACA........................................................................................... 24 1 6 0.17 1 1 0 0 0 0
............................................................CCACACACCAAACTAGAGGCTCT........................................................................... 23 0 6 0.17 1 1 0 0 0 0
.........................................................ATCCCACACACCAAACTAGAGGCTT............................................................................ 25 1 6 0.17 1 1 0 0 0 0
.................................................................CACCAAACTAGAGGCTCTTACTT...................................................................... 23 0 6 0.17 1 1 0 0 0 0
......................................................GCCATCCCACACACCAAACTAGAGGC.............................................................................. 26 0 6 0.17 1 0 1 0 0 0
...........................................ATTGCAGGGAAGCCATCCCACACAC.......................................................................................... 25 1 6 0.17 1 1 0 0 0 0
................................CAGCAGGCTCCATTGCAGGTAAGC...................................................................................................... 24 0 6 0.17 1 1 0 0 0 0
.............................................TGCAGGTAAGCCATCCCAC.............................................................................................. 19 0 6 0.17 1 0 1 0 0 0
........................................TCCATTGCTGGTAAGCCATCCCACACA........................................................................................... 27 1 6 0.17 1 1 0 0 0 0
..............................................................ACACACCAAACTAGAGGCTCTTA......................................................................... 23 0 6 0.17 1 1 0 0 0 0
..........................................................TCCCACACACCAAACTAGAGGCTCTTAC........................................................................ 28 0 6 0.17 1 1 0 0 0 0
...........................................ATTGCAGGAAAGCCATCCCACA............................................................................................. 22 1 6 0.17 1 1 0 0 0 0
...........................CTCCACAGCAGGCTCCATTGCAGG........................................................................................................... 24 1 6 0.17 1 0 1 0 0 0
..............................CACAGCAGGCTCCATTGCAGGT.......................................................................................................... 22 0 6 0.17 1 0 1 0 0 0
.............................CCACAGCAGGCTCCATTGC.............................................................................................................. 19 0 20 0.15 3 1 2 0 0 0
....................................................................CAAACTAGAGGCTCTTACTTACTCA................................................................. 25 0 7 0.14 1 1 0 0 0 0
...........................................ATTGCAGGAAAACCATCCC................................................................................................ 19 2 7 0.14 1 0 0 1 0 0
....................................................................CAAACTAGAGGCTCTTACT....................................................................... 19 0 7 0.14 1 1 0 0 0 0
......................................................GCCATCCAACACACCAAACTAGAG................................................................................ 24 1 7 0.14 1 0 1 0 0 0
.....................................................AGCCATCCAACACACCAAACTAGAGGCT............................................................................. 28 1 7 0.14 1 1 0 0 0 0
...................................................................CCAAACTAGAGGCTCTTACT....................................................................... 20 0 7 0.14 1 1 0 0 0 0
.........................................................................................................................GCAGCGAGATGTTATCGTTC................. 20 3 8 0.13 1 0 0 0 0 1
...........................................................................GAGGCTCTTACTTACTCACT............................................................... 20 0 8 0.13 1 0 1 0 0 0
........................CATTGCCACAGCAGGCTC.................................................................................................................... 18 2 9 0.11 1 0 1 0 0 0
........................CTCCGCCACAGCAGGCTCCATTGC.............................................................................................................. 24 1 9 0.11 1 0 1 0 0 0
........................................................................CTAGAGACTCTTTCTGACTC.................................................................. 20 3 17 0.06 1 0 1 0 0 0
............................GCCACAGCAGGCTCCATTGC.............................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
...........................CGCCACAGAAGGCTCCATTGC.............................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
..........................CCGCCACAGCAGGCTCCATT................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................CTACATCAAGCTGTTGTCCT................... 20 3 20 0.05 1 0 1 0 0 0
...........................TGCCACAGCAGGCTCCATTGC.............................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
...........................CTCTACAGCAGGCTCCATTGC.............................................................................................................. 21 2 20 0.05 1 0 1 0 0 0
...........................CGCCACAGCAGGCTCCGTTGC.............................................................................................................. 21 1 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

GACGCGGCGGTAGAATACCACACGGTGGCGGTGTCGTCCGAGGTAACGTCCATTCGGTAGGGTGTGTGGTTTGATCTCCGAGAATGAATGAGTGAAAAAGTAGCCGTCTAAGGAGGTGTGACGTAGCTCGACAATAGGAAGGAACTCAGGCTGGACGG
**************************************************...((((.((...............))))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
 V055
head
.............................GGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 24 0 6 26.67 160 134 21 2 2 1 0
...........AGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 26 0 2 21.00 42 36 6 0 0 0 0
..........................GGCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 27 0 6 12.00 72 62 8 2 0 0 0
....................CACGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 24 0 2 8.50 17 8 9 0 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 23 0 6 8.33 50 43 6 1 0 0 0
............................CGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 25 0 6 5.67 34 30 2 2 0 0 0
......................................CGAGGTAACGTCCATTCGGTAGGGT............................................................................................... 25 0 6 4.83 29 5 15 1 8 0 0
...................................................................GGTTTGATCTCCGAGAATGAATGAG.................................................................. 25 0 7 4.14 29 9 2 12 5 1 0
..............................................CGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 25 0 6 3.67 22 3 7 4 7 1 0
..........TAGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 27 0 2 3.50 7 6 1 0 0 0 0
...............................TGTCGTCCGAGGTAACGTCCAT......................................................................................................... 22 0 6 3.33 20 12 6 2 0 0 0
..................................................................TGGTTTGATCTCCGAGAATGAATGAG.................................................................. 26 0 6 3.33 20 0 8 8 3 1 0
...................................................................GGTTTGATCTCCGAGAATGAATGAGT................................................................. 26 0 7 3.29 23 16 2 4 1 0 0
............GAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 25 0 2 3.00 6 6 0 0 0 0 0
...........AGAATACCACACGGTGGCGGTGTCGTC........................................................................................................................ 27 0 2 2.50 5 3 2 0 0 0 0
..............ATACCACACGGTGGCGGTGTCGTCCG...................................................................................................................... 26 0 2 2.50 5 2 3 0 0 0 0
...............................................GTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 24 0 6 2.50 15 7 2 1 3 2 0
.......................GGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 21 0 4 2.25 9 4 4 1 0 0 0
.............................GGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 23 0 6 2.17 13 13 0 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 26 0 6 2.17 13 12 1 0 0 0 0
..............................................CGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 24 0 6 2.17 13 4 1 5 3 0 0
.....GGCGGTAGAATACCACACGGTGGCGG............................................................................................................................... 26 0 3 2.00 6 6 0 0 0 0 0
..................CACACGGTGGCGGTGTCGTCCG...................................................................................................................... 22 0 2 2.00 4 0 4 0 0 0 0
...........AGAATACCACACGGTGGGGGTGTCGT......................................................................................................................... 26 1 2 2.00 4 4 0 0 0 0 0
............................................AACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 26 0 6 2.00 12 8 3 1 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGTT....................................................................................... 22 0 6 2.00 12 1 6 4 1 0 0
.......................................GAGGTAACGTCCATTCGGTAGGGT............................................................................................... 24 0 6 2.00 12 4 1 0 7 0 0
.........................TGGCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0
.......................................................................TGATCTCCGAGAATGAATGAGTGAA.............................................................. 25 0 7 1.86 13 3 6 3 1 0 0
................................GTCGTCCGAGGTAACGTCCAT......................................................................................................... 21 0 6 1.83 11 7 4 0 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGTTT...................................................................................... 23 0 6 1.83 11 1 8 1 0 1 0
..........................GGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 23 0 6 1.83 11 5 2 4 0 0 0
......................CGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 22 0 4 1.75 7 5 1 1 0 0 0
..........................................GTAACGTCCATTCGGTAGGGTGTGT........................................................................................... 25 0 6 1.67 10 10 0 0 0 0 0
.................................TCGTCCGAGGTAACGTCCAT......................................................................................................... 20 0 6 1.67 10 9 1 0 0 0 0
.....GGCGGTAGAATACCACACGGTGGCG................................................................................................................................ 25 0 3 1.67 5 2 3 0 0 0 0
....CGGCGGTAGAATACCACACGGT.................................................................................................................................... 22 0 3 1.67 5 0 4 0 1 0 0
.......................................................................TGATCTCCGAGAATGAATGAGTGAAA............................................................. 26 0 3 1.67 5 1 3 1 0 0 0
........................................................................GATCTCCGAGAATGAATGAGTGAAA............................................................. 25 0 3 1.67 5 3 2 0 0 0 0
.........GTAGAATACCACACGGTGGCGGTGT............................................................................................................................ 25 0 3 1.67 5 5 0 0 0 0 0
.........................TGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 23 0 4 1.50 6 2 4 0 0 0 0
....................CACGGTGGCGGTGTCGTCCGAGTT.................................................................................................................. 24 1 2 1.50 3 0 3 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 25 0 4 1.50 6 5 1 0 0 0 0
..................CACACGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 26 0 2 1.50 3 1 2 0 0 0 0
........................GTGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 24 0 4 1.50 6 5 1 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGTA................................................................................................................. 22 0 4 1.50 6 4 2 0 0 0 0
...........AGAATACCACACGGTGGCGGTGTCG.......................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0 0
............GAATACCACACGGTGGCGGTGTCGTC........................................................................................................................ 26 0 2 1.50 3 1 2 0 0 0 0
......................................................................TTGATCTCCGAGAATGAATGAGTGAA.............................................................. 26 0 7 1.43 10 3 6 0 1 0 0
...............................................GTCCATTCGGTAGGGTGTGTGGT........................................................................................ 23 0 6 1.33 8 4 1 3 0 0 0
............................CGGTGTCGTCCGAGGTAACGT............................................................................................................. 21 0 6 1.33 8 4 4 0 0 0 0
...........................................TAACGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 28 0 6 1.33 8 3 1 2 1 1 0
.........................................GGTAACGTCCATTCGGTAGGGTGTGT........................................................................................... 26 0 6 1.33 8 7 0 1 0 0 0
...............................................................GTGTGGTTTGATCTCCGAGAATGAAT..................................................................... 26 0 6 1.33 8 3 0 5 0 0 0
.......CGGTAGAATACCACACGGTGGCGGT.............................................................................................................................. 25 0 3 1.33 4 2 2 0 0 0 0
...........................................TAACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 27 0 6 1.33 8 4 0 3 1 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAATGAG.................................................................. 28 0 6 1.17 7 0 2 4 1 0 0
............................................AACGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 27 0 6 1.17 7 4 1 2 0 0 0
.............................................................GTGTGTGGTTTGATCTCCGAGAAT......................................................................... 24 0 6 1.17 7 1 1 1 3 1 0
.............................GGTGTCGTCCGAGGTAACGTCCATT........................................................................................................ 25 0 6 1.17 7 6 1 0 0 0 0
......................................CGAGGTAACGTCCATTCGGTAGGGTGT............................................................................................. 27 0 6 1.17 7 4 3 0 0 0 0
............................................................GGTGTGTGGTTTGATCTCCGAGAAT......................................................................... 25 0 6 1.17 7 4 0 1 2 0 0
..................................CGTCCGAGGTAACGTCCAT......................................................................................................... 19 0 6 1.17 7 3 3 0 0 0 1
........GGTAGAATACCACACGGTGGCGGT.............................................................................................................................. 24 0 3 1.00 3 1 2 0 0 0 0
............GAATACCACACGGTGGCGGTGTCG.......................................................................................................................... 24 0 2 1.00 2 1 1 0 0 0 0
..........................................GTAACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 28 0 6 1.00 6 5 0 1 0 0 0
.............................GGTGTCGTCCGAGGTAACGT............................................................................................................. 20 0 6 1.00 6 5 1 0 0 0 0
................................................TCCATTCGGTAGGGTGTGTGGTTT...................................................................................... 24 0 6 1.00 6 1 4 0 1 0 0
.........................TTGCCGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
.......CGGTAGAATACCACACGGTGGCGGTGT............................................................................................................................ 27 0 3 1.00 3 2 1 0 0 0 0
...................ACACGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 25 0 2 1.00 2 2 0 0 0 0 0
..CGCGGCGGTAGAATACCACACGGTG................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
................ACCACACGGTGGCGGTGTCGT......................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0
.........................TTGCGGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
..CGCGGCGGTAGAATACCACACG...................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.............................................ACGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 25 0 6 1.00 6 0 1 2 3 0 0
.............................GGTGTCGTCCGAGGTAACGTC............................................................................................................ 21 0 6 1.00 6 1 5 0 0 0 0
.........GTAGAATACCACACGGTGGCGGT.............................................................................................................................. 23 0 3 1.00 3 3 0 0 0 0 0
.........................TTGCGGTGTCGTCCGAGGTAACGT............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
GACGCGGCGGTAGAATACCAC......................................................................................................................................... 21 0 2 1.00 2 0 2 0 0 0 0
.........GTAGAATACCACACGGTGGCGGTGTCG.......................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0
.........GTAGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 24 0 4 1.00 4 3 1 0 0 0 0
.................CCACACGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 27 0 2 1.00 2 0 2 0 0 0 0
.....................................................TCGGTAGGGTGTGTGGTT....................................................................................... 18 0 6 0.83 5 3 1 0 0 0 1
.............................GGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 24 1 6 0.83 5 5 0 0 0 0 0
.....................................CCGAGGTAACGTCCATTCGGTAGGGT............................................................................................... 26 0 6 0.83 5 2 3 0 0 0 0
.......................................................GGTAGGGTGTGTGGTTTGAT................................................................................... 20 0 6 0.83 5 1 2 2 0 0 0
................................................TCCATTCGGTAGGGTGTGTGGTT....................................................................................... 23 0 6 0.83 5 1 1 2 0 1 0
......................CGGTGGCGGTGTCGTCCGAGGTAA................................................................................................................ 24 0 4 0.75 3 1 2 0 0 0 0
.........................TGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 22 0 4 0.75 3 1 0 2 0 0 0
..................................................................CGGTTTGATCTCCGAGAATGAATGAG.................................................................. 26 1 7 0.71 5 0 4 1 0 0 0
......................................................................TTGATCTCCGAGAATGAATGAGTGAAA............................................................. 27 0 3 0.67 2 1 1 0 0 0 0
.................................................................GTGGTTTGATCTCCGAGAATGAATGAG.................................................................. 27 0 6 0.67 4 2 0 2 0 0 0
...............................................GTCCATTCGGTAGGGTGTGTGGTTT...................................................................................... 25 0 6 0.67 4 2 0 0 2 0 0
.............................................ACGTCCATTCGGTAGGGTGTGTGGTT....................................................................................... 26 0 6 0.67 4 1 1 1 1 0 0
...........................GCGGTGTCGTCCGAGGTAACGT............................................................................................................. 22 0 6 0.67 4 4 0 0 0 0 0
........GGTAGAATACCACACGGTGGCG................................................................................................................................ 22 0 3 0.67 2 1 1 0 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGT........................................................................................ 21 0 6 0.67 4 1 2 0 1 0 0
.....GGCGGTAGAATACCACACGGTGGCGGT.............................................................................................................................. 27 0 3 0.67 2 2 0 0 0 0 0
............................................................................TCCGAGAATGAATGAGTGAAATATT......................................................... 25 2 3 0.67 2 0 2 0 0 0 0
........GGTAGAATACCACACGGTGGCGGTG............................................................................................................................. 25 0 3 0.67 2 1 1 0 0 0 0
......................................CGAGGTAACGTCCATTCGGTAGGTT............................................................................................... 25 1 6 0.67 4 0 4 0 0 0 0
.............................................ACGTCCATTCGGTAGGGTGTGT........................................................................................... 22 0 6 0.67 4 0 0 1 3 0 0
..................................................................TGGTTTGATCTCCGAGAATGAATGAGT................................................................. 27 0 6 0.67 4 0 2 1 1 0 0
...........................................TAACGTCCATTCGGTAGGGTGTGT........................................................................................... 24 0 6 0.67 4 0 3 1 0 0 0
....................................................................................TGAATGAGTGAAAAAGTAGCCGTCT................................................. 25 0 3 0.67 2 0 0 2 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 22 0 6 0.67 4 4 0 0 0 0 0
.......CGGTAGAATACCACACGGTGGCG................................................................................................................................ 23 0 3 0.67 2 0 2 0 0 0 0
........GGTAGAATACCACACGGTGGCGG............................................................................................................................... 23 0 3 0.67 2 0 2 0 0 0 0
............................CGGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 24 0 6 0.67 4 3 1 0 0 0 0
.............................................................................CCGAGAATGAATGAGTGAAAAAGTA........................................................ 25 0 3 0.67 2 0 1 1 0 0 0
...............................................................................GAGAATGAATGAGTGAAAAAGTAGC...................................................... 25 0 3 0.67 2 0 1 1 0 0 0
...................................................................GGTTTGATCTCCGAGAATGAATGAGTG................................................................ 27 0 7 0.57 4 2 0 2 0 0 0
....................................................................GTTTGATCTCCGAGAATGAATGAG.................................................................. 24 0 7 0.57 4 2 0 1 0 0 1
.............AATACCACACGGTGGGGGTGTCGT......................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
........................GTGGCGGTGTCGTCCGAGGTA................................................................................................................. 21 0 4 0.50 2 1 0 0 0 1 0
..........AAGAATACCACACGGTGGGGGTGTCGT......................................................................................................................... 27 2 2 0.50 1 1 0 0 0 0 0
......................CGGTGGCGGTGTCGTCCGAGGTAACG.............................................................................................................. 26 0 4 0.50 2 2 0 0 0 0 0
....................CACGGTGGCGGTGTCGTCCGAG.................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0
....................CACGGTGGCGGTGTCCTCCGAGGT.................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0 0
.....................ACGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 23 0 4 0.50 2 2 0 0 0 0 0
..................TACACGGTGGCGGTGTCGTCCGAG.................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
....................CACGGTGGCGATGTCGTCCGAGGT.................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0 0
..........CAGAAGACCACACGGTGGGGGTGTCGT......................................................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0
......................................................CGGTAGGGTGTGTGGTTTGAT................................................................................... 21 0 6 0.50 3 0 1 1 1 0 0
...........AGAATACCACACGGTGGCGGTGTCCT......................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
...........AGGATACCACACGGTGGCGGTGTCGT......................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0
..............ATACCACACGGTGGCGGTGTCGTC........................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0
........GGTAGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 29 0 2 0.50 1 0 1 0 0 0 0
..............ATACCGCACGGTGGCGGTGTCGT......................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
............GAATACCAGACGGTGGCGGTGTCGT......................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.....................................................TCGGTAGGGTGTGTGGTTTGAT................................................................................... 22 0 6 0.50 3 2 0 1 0 0 0
..................CACACGGTGGCGGTGTCGTCCGAG.................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0
....................CACGGTGGCGGTGTCGTCCTA..................................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0
........................GTGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 23 0 4 0.50 2 1 1 0 0 0 0
..............ATACCACACGGTGGCGGTGTCGTCC....................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0
...................ACACGGTGGCGGTGTCGTCCG...................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0
.........GTAGAATACCACACGGTGGGGGTGTCGT......................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0 0
....................CACGGTGGTGGTGTCGTCCGAGGT.................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0 0
............GAATACCACACGTTGGCGGTGTCGTCCG...................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0 0
..............................GTGTCGTCCGAGGTAACGT............................................................................................................. 19 0 6 0.50 3 3 0 0 0 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAAT..................................................................... 25 0 6 0.50 3 1 1 1 0 0 0
.........GTAGAATACCACACGGTGGCGGTCTC........................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
..........................GGCGGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 26 0 6 0.50 3 3 0 0 0 0 0
..................CACACGGTGGCGGTGTCGTCCGA..................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
..............ATACCACACGGTGGCGGTGTCGT......................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0
...........AGAATACCACACGGTGGCGGTGTCTT......................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
...........TGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
............GAATACCACACGGTGGCGGTGTCTT......................................................................................................................... 25 1 2 0.50 1 0 1 0 0 0 0
................................................TCCATTCGGTAGGGTGTGTGGT........................................................................................ 22 0 6 0.50 3 1 1 1 0 0 0
..................CACACGGTGGCGGTGTCGTCCGAGG................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
....................................................TTCGGTAGGGTGTGTGGTTT...................................................................................... 20 0 6 0.50 3 1 1 0 1 0 0
...........AGAATACCACACGGTGGCGGTGTCGTCC....................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0
...................ACACGGTGGCGGTGTCGTGCGAGGTAA................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0 0
....................CACGGTGGCGGTGTCGTCCGAGG................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0
...........AGAATACCACACGGTGGTGGTGTCGTC........................................................................................................................ 27 1 2 0.50 1 1 0 0 0 0 0
..........AAGAATACCACACGGTGGAGGTGTCGT......................................................................................................................... 27 2 2 0.50 1 1 0 0 0 0 0
...........AGAATACCACACGGTGGCGGTGTCGTCCG...................................................................................................................... 29 0 2 0.50 1 0 1 0 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCATT........................................................................................................ 24 0 6 0.50 3 1 2 0 0 0 0
.................CCACACGGTGGCGGTGTCGTCCG...................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0
..........TAGAATACCACACGGTGGCGGTTTCGT......................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0
............AAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.........AAAGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 28 2 2 0.50 1 1 0 0 0 0 0
..............ATACCACACGGTGGCGGTGTCGTCGG...................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
...................ACACGGTGGCGGTGTCGTCCGAGGTAA................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0
.........................TGGCTGTGTCGTCCGAGGTAACG.............................................................................................................. 23 1 4 0.50 2 0 0 1 1 0 0
............................CGGTGTCGTCCGAGGTAACGTC............................................................................................................ 22 0 6 0.50 3 2 1 0 0 0 0
..........AAGAATACCACACGGTGGCGGTGTCGT......................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0
.......................GGTGGCGGTGTCTTCCGAGGT.................................................................................................................. 21 1 4 0.50 2 2 0 0 0 0 0
.............AATACCACACGGTGGCGGTGTCGTC........................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0
.............AATACCACACGGTGGCGGTGTCGT......................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
........GGTAGAATACCACACGGTGGCGGTGGC........................................................................................................................... 27 1 2 0.50 1 0 1 0 0 0 0
....................AACGGTGGCGGTGTCGTCCGAGGTAA................................................................................................................ 26 1 4 0.50 2 2 0 0 0 0 0
...................................................................GGTTTGATCTCCGAGAATGAATGA................................................................... 24 0 7 0.43 3 3 0 0 0 0 0
....................................................................GTTTGATCTCCGAGAATGAATGAGTGA............................................................... 27 0 7 0.43 3 3 0 0 0 0 0
.......................................GAGGTAACGTCCATTCGGTAGGGTGTGT........................................................................................... 28 0 6 0.33 2 1 0 1 0 0 0
.......................................................................................ATGAGTGAAAAAGTAGCCGTCTAAG.............................................. 25 0 3 0.33 1 0 0 1 0 0 0
.....................................................TCGGTAGGGTGTGTGGTTT...................................................................................... 19 0 6 0.33 2 2 0 0 0 0 0
.........GTAGAATACCACACGGTGGCTG............................................................................................................................... 22 1 3 0.33 1 0 1 0 0 0 0
.................................................CCATTCGGTAGGGTGTGTGGTTTGATCT................................................................................. 28 0 6 0.33 2 2 0 0 0 0 0
.......................................................................CGATCTCCGAGAATGAATGAGAGAAA............................................................. 26 2 3 0.33 1 0 1 0 0 0 0
.....AGCGGTAGAATACCACACGGTGGC................................................................................................................................. 24 1 3 0.33 1 0 1 0 0 0 0
..............................GTGTCGTCCGAGGTAACGTCCATTCG...................................................................................................... 26 0 6 0.33 2 2 0 0 0 0 0
...............................................................GTGTGGTTTGATCTCCGAGAATGAA...................................................................... 25 0 6 0.33 2 0 0 2 0 0 0
..............................................................TGTGTGGTTTGATCTCCGAGAAT......................................................................... 23 0 6 0.33 2 0 2 0 0 0 0
......GCGGTAGAATACCACACGGTGGCGGTG............................................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0
.....GGCGGTAGAATACCACACG...................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0
..............................................................TGTGTGGTTTGATCTCCGAGAATGA....................................................................... 25 0 6 0.33 2 0 2 0 0 0 0
.......................................................................TGATCTCCGAGAATGAATGAGGGAAA............................................................. 26 1 3 0.33 1 0 0 0 1 0 0
........GGTAGAATACCACACGGTGGCGGCTT............................................................................................................................ 26 2 3 0.33 1 0 1 0 0 0 0
................................GTCGTCCGAGGTAACGTCCATT........................................................................................................ 22 0 6 0.33 2 2 0 0 0 0 0
.....GGCGGTAGAATACCACACGGTGG.................................................................................................................................. 23 0 3 0.33 1 0 1 0 0 0 0
............................................................................CCCGAGAATGAATGAGTGAAA............................................................. 21 1 3 0.33 1 0 1 0 0 0 0
..........CAGAATACCACACGGTGGCGGTGT............................................................................................................................ 24 1 3 0.33 1 0 1 0 0 0 0
............................................................................TCCGAGAATGAATGAGTGAAAAATT......................................................... 25 1 3 0.33 1 0 1 0 0 0 0
.............................GGTGTCGTCCGAGGTCACGTCCAT......................................................................................................... 24 1 6 0.33 2 2 0 0 0 0 0
........GGTAGAATACCACACGGTGGCGGTGT............................................................................................................................ 26 0 3 0.33 1 0 1 0 0 0 0
..........................................................AGGGTGTGTGGTTTGATCTCCGAGAAT......................................................................... 27 0 6 0.33 2 2 0 0 0 0 0
....CGGCGGTAGAATACCACACGGTGG.................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0
....................................................TTCGGTAGGGTGTGTGGTTTGAT................................................................................... 23 0 6 0.33 2 1 1 0 0 0 0
............................CGGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 25 1 6 0.33 2 2 0 0 0 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAA...................................................................... 24 0 6 0.33 2 1 1 0 0 0 0
....AGGCGGTAGAATACCACACGGTGG.................................................................................................................................. 24 1 3 0.33 1 0 1 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGTCCA.......................................................................................................... 25 0 6 0.33 2 2 0 0 0 0 0
..........................GGCGGTGTCGTCCGAGGTGACGTCCAT......................................................................................................... 27 1 6 0.33 2 2 0 0 0 0 0
......GCGGTAGAATACCACACGGT.................................................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0
.............................GGTGTCGTCCGAGGTAACGTCC........................................................................................................... 22 0 6 0.33 2 2 0 0 0 0 0
...GCGGCGGTAGAATACCACACGGT.................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
........GGTAGAATACCACACGGTGGCGGTTT............................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0 0
.....................................................................................GAATGAGTGAAAAAGTAGCCGTCT................................................. 24 0 3 0.33 1 1 0 0 0 0 0
.....GGCGGTAGAATACCACACGGT.................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
...................................GTCCGAGGTAACGTCCAT......................................................................................................... 18 0 6 0.33 2 1 0 0 1 0 0
....CGGCGGTAGAATACCACACGGTTG.................................................................................................................................. 24 1 3 0.33 1 0 1 0 0 0 0
......GCGGTAGAATACCACACGGTG................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
..............................................TGTCCATTCGGTAGGGTGTGTGGT........................................................................................ 24 1 6 0.33 2 1 0 1 0 0 0
....CGGCGGTAGAATACCACACGGTG................................................................................................................................... 23 0 3 0.33 1 0 1 0 0 0 0
......................................................................TTGATCTCCGAGAATGGATGAGTGAAA............................................................. 27 1 3 0.33 1 0 0 1 0 0 0
.......CGGTAGAATACCACACGGTGGCGG............................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
........................................AGGTAACGTCCATTCGGTAGGTT............................................................................................... 23 1 6 0.33 2 0 2 0 0 0 0
.......CGGTAGAATACCACACGGT.................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0
...........AGAATACCACACGGTGGCGTT.............................................................................................................................. 21 1 3 0.33 1 0 1 0 0 0 0
.....GGCGGTAGAATACCACACGGTG................................................................................................................................... 22 0 3 0.33 1 0 1 0 0 0 0
......TCGGTAGAATACCACACTGTGGCGGT.............................................................................................................................. 26 2 3 0.33 1 1 0 0 0 0 0
...................................................ATTCGGTAGGGTGTGTGGTTTGAT................................................................................... 24 0 6 0.33 2 2 0 0 0 0 0
...........................GCGGTGTCGTCCGAGGTAACGTC............................................................................................................ 23 0 6 0.33 2 1 1 0 0 0 0
........GGTAGAATACCACACGGTGGCGTT.............................................................................................................................. 24 1 3 0.33 1 0 1 0 0 0 0
....CGGCGGTAGAATACCACACGGTGGCG................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0
..................................................CATTCGGTAGGGTGTGTGGTT....................................................................................... 21 0 6 0.33 2 1 1 0 0 0 0
....CGGCGGTAGAATACCACACGGTGGCGG............................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0
........................................................................CATCTCCGAGAATGAATGAGTGAAA............................................................. 25 1 3 0.33 1 0 1 0 0 0 0
......GCGGTAGAATACCACACGGTGGCGGT.............................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0
........................................................GTAGGGTGTGTGGTTTGATCT................................................................................. 21 0 6 0.33 2 0 2 0 0 0 0
........GGTAGAATACCACACGGTGGCTG............................................................................................................................... 23 1 3 0.33 1 0 1 0 0 0 0
......................................................................ATGATCTCCGAGAATGAATGAGTGAAA............................................................. 27 1 3 0.33 1 0 1 0 0 0 0
......................................TGAGGTAACGTCCATTCGGTAGGGT............................................................................................... 25 1 6 0.33 2 0 2 0 0 0 0
....CGGCGGTAGAATACCACACGG..................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAATG.................................................................... 26 0 6 0.33 2 0 1 1 0 0 0
.......................................................................CGATCTCCGAGAATGAATGAGTGAAA............................................................. 26 1 3 0.33 1 0 1 0 0 0 0
.................................................................GTGGTTTGATCTCCGAGAATGAATG.................................................................... 25 0 6 0.33 2 0 1 1 0 0 0
....CGGCGGTAGAATACCACACGGTGCCG................................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0 0
..................................CGTCCGAGGTGAGGTCCA.......................................................................................................... 18 2 17 0.29 5 0 4 0 0 0 1
........................................................................GATCTCCGAGAATGAATGAGTGAA.............................................................. 24 0 7 0.29 2 1 1 0 0 0 0
....CGGCGGTAGAATACCACACGTT.................................................................................................................................... 22 1 7 0.29 2 0 2 0 0 0 0
...................................................................GTTTTGATCTCCGAGAATGAATGAGT................................................................. 26 1 7 0.29 2 0 0 0 2 0 0
......................................................................TTGATCTCCGAGAATGAAT..................................................................... 19 0 7 0.29 2 2 0 0 0 0 0
..........................................................................TCTCCGAGAATGAATGAGTGAA.............................................................. 22 0 7 0.29 2 0 1 0 1 0 0
......................CGGTGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGCAAC............................................................................................................... 24 1 4 0.25 1 0 0 0 0 1 0
........................GTGGCGGTGTCGTCCGAGGT.................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0
.....................TGGGTGGCGATGTCGTCCGAGGT.................................................................................................................. 23 3 4 0.25 1 0 0 0 1 0 0
.......................TGTGGCGGTGTCGTCCTAGGTAACG.............................................................................................................. 25 2 4 0.25 1 0 0 1 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGTAA................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0
.......................GGGGGCGGTGTCGTCCGAGGT.................................................................................................................. 21 1 4 0.25 1 0 1 0 0 0 0
.........................TGGCGGTGTCGTCCGAGGT.................................................................................................................. 19 0 4 0.25 1 1 0 0 0 0 0
.........................TAGCGGTGTCGTCCGAGGTAAC............................................................................................................... 22 1 4 0.25 1 0 0 0 0 1 0
.AAGCGGCGGTAGAATACCAT......................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGGA................................................................................................................. 22 1 4 0.25 1 0 1 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGTT.................................................................................................................. 21 1 4 0.25 1 0 1 0 0 0 0
.........................TAACGGTGTCGTCCGAGGTAACG.............................................................................................................. 23 2 4 0.25 1 0 1 0 0 0 0
......................TTGTGGCGGTGTCGTCCGAGGTAA................................................................................................................ 24 2 4 0.25 1 0 1 0 0 0 0
......................GGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 22 1 4 0.25 1 0 0 0 1 0 0
......................TGGTGGGGGTGTCGTCCGAGGT.................................................................................................................. 22 2 4 0.25 1 0 0 0 1 0 0
......................CGGAGGCGGTGTCGTCCGAGGT.................................................................................................................. 22 1 4 0.25 1 0 0 0 1 0 0
........................TTGGCGGTGTCGTCCGAGGTAA................................................................................................................ 22 1 4 0.25 1 0 1 0 0 0 0
............................CGGTGTCGTCCGAGGTAACG.............................................................................................................. 20 0 20 0.25 5 0 5 0 0 0 0
......................CGGTGGCGGTGTCGTCCGA..................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0
.......................AGTGGCGGTGTCGTCCGAGGTAAC............................................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0
........................GGGGGGGTGTCGGCCGAGGTAAC............................................................................................................... 23 3 4 0.25 1 0 0 0 1 0 0
........................GTGGCGGTGTCGTCCGAGTT.................................................................................................................. 20 1 4 0.25 1 0 1 0 0 0 0
......................AGGTGGCGGTGTCGTCCGAGGT.................................................................................................................. 22 1 4 0.25 1 1 0 0 0 0 0
.......................GGTGGCGGTGTCGTCCGAGGTTACG.............................................................................................................. 25 1 4 0.25 1 0 0 1 0 0 0
.....................ACGGTGGCGGTGTCGTCCG...................................................................................................................... 19 0 4 0.25 1 0 1 0 0 0 0
........................................................................................................................ACGTGGCCGGACAATAGGAAG................. 21 3 5 0.20 1 1 0 0 0 0 0
............................CGGTGTCGTCCGTGGTAACGT............................................................................................................. 21 1 6 0.17 1 1 0 0 0 0 0
...........................GCGTTGTCGTCCGAGGTAACGTC............................................................................................................ 23 1 6 0.17 1 0 0 0 1 0 0
..............................................CTTCCATTCGGTAGGGTGTGTGGT........................................................................................ 24 1 6 0.17 1 0 0 0 1 0 0
.............................GGGGTCGTCCGAGGTTACGTCCAT......................................................................................................... 24 2 6 0.17 1 1 0 0 0 0 0
............................................AACGTCCATTCGGTAGGGTGT............................................................................................. 21 0 6 0.17 1 0 1 0 0 0 0
.................................CCGTCCGAGGTAACGTCCAT......................................................................................................... 20 1 6 0.17 1 0 1 0 0 0 0
................................................................TGTGGTTTGATCTCCGAGAATCAA...................................................................... 24 1 6 0.17 1 0 1 0 0 0 0
..............................CGGTCGTCCGAGGTAACGTCCAT......................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0
.......................................GATGTAACGTCCATTCGGTAGGGT............................................................................................... 24 1 6 0.17 1 0 0 0 1 0 0
.....................................................TCGGTGGGGTGGGGGGTTTGATCT................................................................................. 24 3 6 0.17 1 0 0 0 1 0 0
.................................................CCATTCGGTAGGGTGGGTGGGT....................................................................................... 22 2 6 0.17 1 0 1 0 0 0 0
.................................................CCATTCGGTAGGGCGTGTGGTT....................................................................................... 22 1 6 0.17 1 0 1 0 0 0 0
................................GTCGTCCGAGGTAACGTCCA.......................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0
........................ATGGCGGTGTCGTCCGAGGTAACGTC............................................................................................................ 26 1 6 0.17 1 0 1 0 0 0 0
...............................................................GTGTGGTTTGATCTCCGAGAAT......................................................................... 22 0 6 0.17 1 0 0 0 1 0 0
......................................CGAGGTAACGTCAATTCGGTAGGTT............................................................................................... 25 2 6 0.17 1 0 1 0 0 0 0
..............................................CGTACATTCGGTAGGGTGTGTGGT........................................................................................ 24 1 6 0.17 1 0 0 0 0 1 0
..........................TGCGGTGTCGTCCGAGGTAACGTCCAT......................................................................................................... 27 1 6 0.17 1 0 1 0 0 0 0
..................................................CATTCGGTAGGGTGTGTGGTTT...................................................................................... 22 0 6 0.17 1 0 0 1 0 0 0
............................CGGTGTCGTCCGAGGTAACGTCC........................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0
.................................................CCATTCGGTAGGGTGTGGGGTTTGAT................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0
............................CGGTGTCTTCCGAGGTAACTT............................................................................................................. 21 2 6 0.17 1 0 1 0 0 0 0
......................................CGAGGTAACGTCCATTCGGTAGGGTG.............................................................................................. 26 0 6 0.17 1 0 1 0 0 0 0
....................................................ATCGGTAGGGTGTGTGGTTT...................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0
................................................................TGTGGTTTGATCTCCGAGAATGAAC..................................................................... 25 1 6 0.17 1 0 0 1 0 0 0
.................................................................GTGCTTTGATCTCCGAGAATGAAT..................................................................... 24 1 6 0.17 1 0 0 1 0 0 0
.........................................GGTAACGTCCATTCGGTAGGGTGT............................................................................................. 24 0 6 0.17 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:17421376-17421533 + dan_3143 CTGCGCCGCCATCTTATGGTGTGCCACCGCCACAGCAGGCTCCATTGCAGGTAAGCCATCCCACACACCAAACTAGAGGCTCTTACTTACTCACTTTTTCATCGGCAGATTCCTCCACACTGCATCGAGCTGTTATCCTTCCTTGAGTCCGACCTGCC
droBip1 scf7180000396390:107465-107513 + CGGC-----------------------------AGATGTTTCCTTCGCAGG--------------------------------------------------------------------------------GCCATCCTTCCTTGAGTCCGACCTGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTGCGCCGCCATCTTATGGTGTGCCACCGCCACAGCAGGCTCCATTGCAGGTAAGCCATCCCACACACCAAACTAGAGGCTCTTACTTACTCACTTTTTCATCGGCAGATTCCTCCACACTGCATCGAGCTGTTATCCTTCCTTGAGTCCGACCTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................ATTGCAGGTAAGCCATCCCACACACC.........................................................................................2663.33201190000
.......................................................................................TACTCACTTTTTCATCGGCAGATTCC.............................................2632.006330000
...........................................ATTGCAGGTAAGCCATCCCACA.............................................................................................2261.83111010000
...........................................ATTGCAGGTAAGCCATCCCACACA...........................................................................................2461.83111100000
...........................................ATTGCAGGTAAGCCATCCCACACAC..........................................................................................2561.8311920000
...........................................ATTGCAGGTAAGCCATCCCAC..............................................................................................2161.8311182000
.............................................................CACACACCAAACTAGAGGCTCTTACT.......................................................................2661.67101000000
.......................................CTCCATTGCAGGTAAGCCATCCC................................................................................................2361.6710550000
.......................................CTCCATTGCAGGTAAGCCATCC.................................................................................................2261.509360000
.........................................................ATCCCACACACCAAACTAGAGGCTCT...........................................................................2661.338800000
.......................................................................................TACTCACTTTTTCATCGGCAGATT...............................................2431.334310000
......................................................................................TTACTCACTTTTTCATCGGCAGAT................................................2431.334210010
...........................................ATTGCAGGTAAGCCATCCCACAC............................................................................................2361.338530000
.......................................CTCCATTGCAGGTAAGCCATCCCA...............................................................................................2461.338710000
.........................................................ATCCCACACACCAAACTAGAGGCTC............................................................................2561.177430000
......................................................................................TTACTCACTTTTTCATCGGCAGATTC..............................................2631.003300000
..............TATGGTGTGCCACCGCCACAGCAGGC......................................................................................................................2621.002200000
...............................................................................CTCTTACTTACTCACTTTTTCATCGG.....................................................2631.003300000
...........................CGCCACAGCAGGCTCCATTGCAGG...........................................................................................................2461.006600000
.........................................................ATCCCACACACCAAACTAGAGGCT.............................................................................2461.006330000
......................................................................................TTACTCACTTTTTCATCGGCAGA.................................................2331.003120000
.............................................................CACACACCAAACTAGAGGCTCTT..........................................................................2361.006510000
..........................................................TCCCACACACCAAACTAGAGGCTCT...........................................................................2561.006600000
................TGGTGTGCCACCGCCACAGCAGGCTC....................................................................................................................2621.002110000
.....................TGCCACCGCCACAGCAGGCTCCATT................................................................................................................2540.753300000
.....................TGCCACCGCCACAGCAGGCTCCAT.................................................................................................................2440.753210000
...................................................................................TACTTACTCACTTTTTCATCGGCAGAT................................................2730.672110000
.......................................................................................TACTCACTTTTTCATCGGCAGATTC..............................................2530.672200000
...........................................ATTGCAGGTAAGCCATCCCACACACCA........................................................................................2760.674400000
.........................................................ATCCCACACACCAAACTAGAGG...............................................................................2260.674220000
.......................................................................................TACTCACTTTTTCATCGGCAGA.................................................2230.672110000
.......................................CTCCATTGCAGGTAAGCCATC..................................................................................................2160.674211000
............................................................CCACACACCAAACTAGAGGCTCTTACT.......................................................................2760.674400000
...................................................................................TACTTACTCACTTTTTCATCGGCAGA.................................................2630.672110000
...........................................ATTGCAGGTAAGCCATCCC................................................................................................1960.674022000
...........................CGCCACAGCAGGCTCCATTGC..............................................................................................................21200.55111100000
..........................CCGCCACAGCAGGCTCCATTGC..............................................................................................................22200.55110110000
...................TGTGCCACCGCCACAGCAGGCTCCATTGC..............................................................................................................2920.501100000
........................CACCGCCACAGCAGGCTCCATTGC..............................................................................................................2440.502020000
.....................TGCCACCGCCACAGCAGGCTCCATTGC..............................................................................................................2740.502200000
..............TATGGTGTGCCACCGCCACAGCAGG.......................................................................................................................2520.501100000
...........................................ATTGCAGGTAAGCCATCCCACACACCAA.......................................................................................2860.503300000
.......................................CTCCATTGCAGGTAAGCCATCCCACA.............................................................................................2660.503300000
............................................TTGCAGGTAAGCCATCCCACACACC.........................................................................................2560.503120000
...................TGTGCCACCGCCACAGCAGGCTCC...................................................................................................................2420.501010000
........................................TCCATTGCAGGTAAGCCATCCCACAC............................................................................................2660.503120000
..............TATGGTGTGCCACCGCCACAGCAGGCTC....................................................................................................................2820.501100000
.....................................................AGCCATCCCACACACCAAACTAGAGGC..............................................................................2760.503120000
...........................CGCCACAGCAGGCTCCATTGCAG............................................................................................................2360.503210000
...........TCTTATGGTGTGCCACCGCCACAGCAGG.......................................................................................................................2820.501010000
.............TTATGGTGTGCCACCGCCACAGCAGG.......................................................................................................................2620.501100000
............................................TTGCAGGTAAGCCATCCCACACA...........................................................................................2360.503300000
.............TTATGGTGTGCCACCGCCACAGCAGGC......................................................................................................................2720.501100000
..............TATGGTGTGCCACCGCCACAGCAGGCTT....................................................................................................................2820.501100000
...........TCTTATGGTGTGCCACCGCCACAGCAGGC......................................................................................................................2920.501010000
..........................................................TCCCACACACCAAACTAGAGGCTCTTA.........................................................................2760.503300000
.....................TGCCACCGCCACAGCAGGCTCC...................................................................................................................2240.502200000
..............................CACAGCAGGCTCCATTGCAGGTAAGC......................................................................................................2660.332110000
........................................................................................ACTCACTTTTTCATCGGCAGATTCC.............................................2530.331010000
.............................................................CACACACCAAACTAGAGGCTCT...........................................................................2260.332200000
...........TCTTATGGTGTGCCACCGCCA..............................................................................................................................2130.331100000
...........................................ATTGCAGGTAAGCCATCC.................................................................................................1860.332020000
.................................................................................CTTACTTACTCACTTTTTCATCGGCA...................................................2630.331100000
......................................................................................TTACTCACTTTTTCATCGGCAGATTCC.............................................2730.331100000
..................................................................................TTACTTACTCACTTTTTCATCGG.....................................................2330.331010000
.........................................................ATCCCACACACCAAACTAGAGGC..............................................................................2360.332110000
..........................................CATTGCAGGTAAGCCATCCC................................................................................................2060.332020000
...................................................TAAGCCATCCCACACACCAAACTAGAGG...............................................................................2860.332020000
.......................................................................................TACTCACTTTTTCATCGGCAGAT................................................2330.331100000
..............................................................ACACACCAAACTAGAGGCTCTTAC........................................................................2460.332200000
...................................................................................TACTTACTCACTTTTTCATCGGC....................................................2330.331010000
..................................................................................TTACTTACTCACTTTTTCATCGGC....................................................2430.331100000
.............................................................CACACACCAAACTAGAGGCTCTTACTTA.....................................................................2860.332200000
..................................................................................TTACTTACTCACTTTTTCATCGGCA...................................................2530.331100000
..............................................................................GCTCTTACTTACTCACTTTTTCATCGG.....................................................2730.331100000
.........................................................ATCCCACACACCAAACTAGAGGCTCTTA.........................................................................2860.332200000
..............................CACAGCAGGCTCCATTGCAGGTAAG.......................................................................................................2560.332200000
.................................................................CACCAAACTAGAGGCTCTTACTTAC....................................................................2560.332200000
.............................................................CACACACCAAACTAGAGGCTCTTAC........................................................................2560.332200000
.............................................................CACACACCAAACTAGAGGCTC............................................................................2160.332200000
...........................CGCCACAGCAGGCTCCATTGCAGGTA.........................................................................................................2660.332200000
......................................................................................TTACTCACTTTTTCATCGGCAGATT...............................................2530.331100000
..............................................................ACACACCAAACTAGAGGCTCTTACTA......................................................................2660.332200000
............................GCCACAGCAGGCTCCATTGCAGG...........................................................................................................2360.332200000
..................................................................................TTACTTACTCACTTTTTCATCGGCAGA.................................................2730.331100000
............................................................CCACACACCAAACTAGAGGCTCTTA.........................................................................2560.332110000
......................GCCACCGCCACAGCAGGCTCCATT................................................................................................................2440.251010000
.....................TGCCACCGCCACAGCAGGCTCCAG.................................................................................................................2440.251100000
.....................TGCCACCGCCACAGCAGGCTCCATTG...............................................................................................................2640.251100000
..............................CACAGCAGGCTCCATTGCAGGTA.........................................................................................................2360.171100000
..............................................GCAGGTAAGCCATCCCACACACCAA.......................................................................................2560.171100000
...........................................................CCCACACACCAAACTAGAGGCTCT...........................................................................2460.171100000
.............................CCACAGCAGGCTCCATTGCAGGTA.........................................................................................................2460.171100000
...........................................ATTGCAGGTAAGCCATCCCACACACA.........................................................................................2660.171100000
...............................................CAGGTAAGCCATCCCACACACCAAACT....................................................................................2760.171100000
...........................................................CCCACACACCAAACTAGAGGCTCTT..........................................................................2560.171100000
............................................................CCACACACCAAACTAGAGGCTCTT..........................................................................2460.171100000
...........................CGCCACAGCAGGCTCCATTGCAGGT..........................................................................................................2560.171100000
............................................................CCACACACCAAACTAGAGG...............................................................................1960.171100000
..............................CACAGCAGGCTCCATTGCAGGTAAGCC.....................................................................................................2760.171010000
............................................................CCACACACCAAACTAGAGGCTCTTACTT......................................................................2860.171100000
...........................................................CCCACACACCAAACTAGAGGCTCTTACT.......................................................................2860.171100000
............................GCCACAGCAGGCTCCATTGCAT............................................................................................................2260.171100000
............................GCCACAGCAGGCTCCATTGCAGGTAAG.......................................................................................................2760.171010000
.........................................CCATTGCAGGTAAGCCATCCCA...............................................................................................2260.171100000
..............................................GCAGGTAAGCCATCCCACACACC.........................................................................................2360.171010000
.............................................TGCAGGTAAGCCATCCCACACACCAA.......................................................................................2660.171010000
.............................................................CACACACCAAACTAGAGGCTCTTACA.......................................................................2660.171100000
..............................................................ACACACCAAACTAGAGGCTCTT..........................................................................2260.171100000
.............................................TGCAGGTAAGCCATCCCACACACC.........................................................................................2460.171100000
.......................................CTCCATTGCAGGTAAGCCATCCCACAC............................................................................................2760.171100000
...............................................................CACACCAAACTAGAGGCTCTTAA........................................................................2360.171001000
.........................................................ATCCCACACACCAAACTAGAGGCTCTTAC........................................................................2960.171100000
..........................................CATTGCAGGTAAGCCATCCCACACA...........................................................................................2560.171100000
..........................................................TCCCACACACCAAACTAGAGGC..............................................................................2260.171100000
..................................................................ACCAAACTAGAGGCTCTTACTTAC....................................................................2460.171010000
.........................................CCATTGCAGGTAAGCCATCCCACACAC..........................................................................................2760.171100000
..........................................CATTGCAGGTAAGCCATCCCACACACC.........................................................................................2760.171010000
.........................................................ATCCCACACACCAAACTAGAGGCTCTA..........................................................................2760.171100000
..............................CACAGCAGGCTCCATTGCAGGTAAGCCA....................................................................................................2860.171100000
..........................................................TCCCACACACCAAACTAGAGGCTCTTACT.......................................................................2960.171100000
...........................................ATTGCAGGTAAGCCATCCCA...............................................................................................2060.171000010
............................................................CCACACACCAAACTAGAGGCTCTTAG........................................................................2660.171100000
.........................................................ATCCCACACACCAAACTAGAGGCTCTT..........................................................................2760.171100000
............................GCCACAGCAGGCTCCATTGCAGGTAA........................................................................................................2660.171100000
..............................CACAGCAGGCTCCATTGCAGG...........................................................................................................2160.171100000
............................................................CCACACACCAAACTAGAGGC..............................................................................2060.171000010
..........................................................TCCCACACACCAAACTAGAGGCTCTT..........................................................................2660.171100000
...........................CGCCACAGCAGGCTCCATTGCAGGTT.........................................................................................................2660.171100000
.................................................................CACCAAACTAGAGGCTCTTACT.......................................................................2260.171100000
.............................................................CACACACCAAACTAGAGGCTCTTA.........................................................................2460.171010000
...........................CGCCACAGCAGGCTCCATTGCAGT...........................................................................................................2460.171100000
.........................................................ATCCCACACACCAAACTAGAG................................................................................2160.171100000
..........................................................TCCCACACACCAAACTAGAGGCTC............................................................................2460.171100000
...............................................CAGGTAAGCCATCCCACACACC.........................................................................................2260.171010000
...........................CGCCACAGCAGGCTCCATTGCAGGATT........................................................................................................2760.171100000
.............................................................CACACACCAAACTAGAGGCTCTTACTTAC....................................................................2960.171010000
........................................................CATCCCACACACCAAACTAGAGGCT.............................................................................2560.171010000
............................................................CCACACACCAAACTAGAGGCTCT...........................................................................2360.171100000
.........................................................ATCCCACACACCAAACTAGAGGCTT............................................................................2560.171100000
.................................................................CACCAAACTAGAGGCTCTTACTT......................................................................2360.171100000
......................................................GCCATCCCACACACCAAACTAGAGGC..............................................................................2660.171010000
................................CAGCAGGCTCCATTGCAGGTAAGC......................................................................................................2460.171100000
.............................................TGCAGGTAAGCCATCCCAC..............................................................................................1960.171010000
..............................................................ACACACCAAACTAGAGGCTCTTA.........................................................................2360.171100000
..........................................................TCCCACACACCAAACTAGAGGCTCTTAC........................................................................2860.171100000
..............................CACAGCAGGCTCCATTGCAGGT..........................................................................................................2260.171010000
.............................CCACAGCAGGCTCCATTGC..............................................................................................................19200.153120000
....................................................................CAAACTAGAGGCTCTTACTTACTCA.................................................................2570.141100000
....................................................................CAAACTAGAGGCTCTTACT.......................................................................1970.141100000
...................................................................CCAAACTAGAGGCTCTTACT.......................................................................2070.141100000
...........................................................................GAGGCTCTTACTTACTCACT...............................................................2080.131010000
............................GCCACAGCAGGCTCCATTGC..............................................................................................................20200.051100000
..........................CCGCCACAGCAGGCTCCATT................................................................................................................20200.051100000
droBip1
CGGC-----------------------------AGATGTTTCCTTCGCAGG--------------------------------------------------------------------------------GCCATCCTTCCTTGAGTCCGACCTGCCSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 06:31 AM