ID:

dan_3126

 Coordinate:

scaffold_13340:16267397-16267577 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.6 -38.4 -38.3

Flybase annnotation

CDS [Dana\GF16476-cds]; exon [dana_GLEANR_17745:1]; CDS [Dana\GF16476-cds]; exon [dana_GLEANR_17745:2]; intron [Dana\GF16476-in]

No Repeatable elements found

Sense Strand Reads

----------########################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAAGCTTAAATCTCACTCACTTCCAAGCGCTGGAAAACCGTGAAAACTGGCGAAAAATAGCGCTTAGTGAGGTTATGTAAGCTTATGTCATAGCAAAACAAAGGACAAAATTGGATAAATAAATGATTTTCATGAGTGATTTAACGCTGGATTGGTTCCTCCTCAGGTCAGCGCATGTTTGGCACCCACGGCGCCAGGATGCTGGCTGCTCAAAAG
**************************************************.((((((((..((((.((((((((((((((((.......((((((((......(((........))).....)))))))))))))))))...)))))))...)))).)).........................(((((.((((....)))).))))).)))))).......*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V106
head
 V055
head
 V039
embryo
....................................................................................................................................................................................................................................ATGGTCAGCGCATGTTTGGCA................................ 21 2 1 6.00 6 1 0 5 0 0 0
..............................TTTCACCGCATCGCGCAATGGTCAGC................................................................................................................................................................................................................................. 26 2 1 4.00 4 4 0 0 0 0 0
.......................TGCGAATTTTCACCGCATCGCGCA.......................................................................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0
...........................AATTTTCACCGCATCGCGCA.......................................................................................................................................................................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0
...........................AATTTTCAGCGCATCGCGCA.......................................................................................................................................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..........................GAATTTTCACCGCATCGCGCAAC........................................................................................................................................................................................................................................ 23 1 1 2.00 2 0 2 0 0 0 0
..........................GAATTTTCACCGCATCGCGC........................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0
...................................CCGCATCGCGCAATGGTCAGC................................................................................................................................................................................................................................. 21 2 1 2.00 2 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................CCAGGATGCTGGCTGCTCA.... 19 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................................................................................................................................TGGTCAGCGCATGTTTGGCACCCACGGC........................ 28 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................CCAAGCGCGGGTAAACGG................................................................................................................................................................................ 18 3 20 1.25 25 15 0 1 2 7 0
...................................................................................................................................................................CAAAGGACAAAATTGGAA.................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0
.................................CACCGCATCGCGCAATGGTCA................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................GAATTTTCACCGCATCGCGCAATGGTC.................................................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................CGCATGTTTGGCACCCACGGCG....................... 22 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................GTCAGCGCATGTTTGGCACCCACGGC........................ 26 0 1 1.00 1 1 0 0 0 0 0
...................................CCGCATCGCGCAATGGTCA................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCACCCACGGCG....................... 28 0 1 1.00 1 1 0 0 0 0 0
......................ATGCGAATTTTCACCGCATCGCGCAATG....................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.................................CACCGCATCGCGCAATGGTC.................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................CGATGCTGGCTGCTCAAAAG 20 1 1 1.00 1 1 0 0 0 0 0
.........................CGAATTTTCACCGCATCGCGCAAT........................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
............................ATTTTCACCGCATCGCGCA.......................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................ACCGCATCGCGCAATGGTCAGCC................................................................................................................................................................................................................................ 23 3 1 1.00 1 0 0 1 0 0 0
.......AACATGTCGCTAACTATGCGAA............................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0
.........................CGAATTTTCACCGCATCGCGC........................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................TCAGCGCATGTTTGGCACCCACGGC........................ 25 0 1 1.00 1 1 0 0 0 0 0
.............................TTTTCACCGCATCGCGCA.......................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................GTGATTTAACGCTGGATTGGTT........................................................... 22 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................AGTTCAGCCCATGTTTGGCA................................ 20 2 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................TGGTCAGCGCATGTTTGGCACC.............................. 22 1 1 1.00 1 1 0 0 0 0 0
..................AACTATGCGAATTTTCACCGCATCGCGCA.......................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................TGGCACCCACGGCGCCAGGAT................ 21 0 1 1.00 1 1 0 0 0 0 0
..................................ACCGCATCGCGCAATGGTT.................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................TGGTCAGCGCATGTTTGGCACCCACGG......................... 27 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................ATGGTCAGCGCATGTTTGGCACC.............................. 23 2 1 1.00 1 0 0 0 0 1 0
..............................CTTCACCGCATCGCGCAACGGTCA................................................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0
..............CGCTAACTATGCGAATTTTCACCGC.................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
...........................AATTTTCACCGCATCGCGCAATGGT..................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................ATGGTCAGGGCATGTTTGGCA................................ 21 3 1 1.00 1 1 0 0 0 0 0
............................................................................................................................GCGCTCAGTGAGGTTATGTAAGC...................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
....................................CGCATCGCGCAATGGTCAGC................................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0
...............................TTCACCGCATCGCGCAATGGTCAGC................................................................................................................................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................TAACGCTGGATTGGTTCCTCCTCAGGTC............................................... 28 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCA................................ 19 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................TGTTTGGCACCCACGGCGCCAGGAT................ 25 0 1 1.00 1 1 0 0 0 0 0
......................ATGCGAATTTTCACCGCATCGCGCA.......................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCACC.............................. 21 0 1 1.00 1 0 0 0 1 0 0
...........................AATTTTCACCGCATCGCGCAATGGTC.................................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................ATGGTCAGCGCATGTTTGGC................................. 20 2 1 1.00 1 0 0 0 1 0 0
.........CATGTCGCTAACTATGCGAATTTTCACCG................................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................GGATGCTGGCTGCTCAAA.. 18 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................ATGGTCAGCGCATGTTTGGCACCCAC........................... 26 2 1 1.00 1 1 0 0 0 0 0
..................................ACCGCATCGCGCAATGGTCAGC................................................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................TTTGGCACCCACGGCGCCAGGATGCT............. 26 0 1 1.00 1 1 0 0 0 0 0
......AAACATGTCGCTAACTATGC............................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.................TAACTATGCGAATTTTCACC.................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..................................................GTTAGTGGCGAATGGAAAGCTTAAATC............................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................TGGTCAGCGCATGTTTGGCAC............................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................GCTGGAAAACCGTGAAAACTGGC..................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1
.....................................................................................TTCCAAGCGCGGGTAAAC.................................................................................................................................................................................. 18 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................TCACGCTGGATTGGCTGCTCC...................................................... 21 3 2 0.50 1 0 1 0 0 0 0
.......................................................................................CCAAGCGCGGGTAAACCGGGA............................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................GTTCCTCCTGAGGTCGGCGGA......................................... 21 3 3 0.33 1 0 0 0 0 0 1
.......................................................................................CCAAGCGCGGGTAAACGGTG.............................................................................................................................................................................. 20 3 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................AGTGCAGCCCATGTTTGGC................................. 19 3 20 0.30 6 6 0 0 0 0 0
........................................................................................CAAGCGCGGGTAAACGGTG.............................................................................................................................................................................. 19 3 9 0.22 2 1 0 1 0 0 0
.................................................................................................................................................................GCCAAAGGACAAAATTGGA..................................................................................................... 19 2 7 0.14 1 1 0 0 0 0 0
..................................ACCGCATAGCGCAGTGGAT.................................................................................................................................................................................................................................... 19 3 19 0.11 2 0 0 0 0 2 0
............................................................................................................................................................AGCACACCAAAGGACAAAA.......................................................................................................... 19 2 10 0.10 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................AGTGCAGCCCATGTTTGGCA................................ 20 3 10 0.10 1 0 0 0 0 0 1
......................................................................................................................................................................................................................................................................TATGCAGGGTGCTCAAAAG 19 3 17 0.06 1 0 0 1 0 0 0

Anti-sense strand reads

CCGGTGTTTGTACAGCGATTGATACGCTTAAAAGTGGCGTAGCGCGTTACCAATCACCGCTTACCTTTCGAATTTAGAGTGAGTGAAGGTTCGCGACCTTTTGGCACTTTTGACCGCTTTTTATCGCGAATCACTCCAATACATTCGAATACAGTATCGTTTTGTTTCCTGTTTTAACCTATTTATTTACTAAAAGTACTCACTAAATTGCGACCTAACCAAGGAGGAGTCCAGTCGCGTACAAACCGTGGGTGCCGCGGTCCTACGACCGACGAGTTTTC
***********************************************************.((((((((..((((.((((((((((((((((.......((((((((......(((........))).....)))))))))))))))))...)))))))...)))).)).........................(((((.((((....)))).))))).)))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 M044
female body
 V055
head
 M058
embryo
 V106
head
................................................................................GAGTGAAGGTTCGCGAGGTGT.................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
................................................................................GAGTGAAGATTCGCGAGG....................................................................................................................................................................................... 18 3 20 0.90 18 12 4 1 0 1
................................................................................GAGTGAAGATTCGCGAGGT...................................................................................................................................................................................... 19 3 15 0.47 7 4 2 1 0 0
........................................................................................................................................................................................................................................................TGGGTGCCGGGGTCCTAA............... 18 2 4 0.25 1 0 1 0 0 0
...............................................................................................................................................................................................................TGTCGACCTAACCAAGGATG...................................................... 20 3 5 0.20 1 0 0 1 0 0
......................................................................................................................................................................................................................................CCATTCGCGTAGAAACCATG............................... 20 3 6 0.17 1 0 1 0 0 0
..........................................................................................................................CTCGTGAATCACTCCAAAACA.......................................................................................................................................... 21 3 7 0.14 1 0 0 1 0 0
..................TTGATACGCTTAATAATGGT................................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 1 0 0
.................................................................................................................................ACCACCCCAATACATTAGA..................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:16267347-16267627 - dan_3126 G---GCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTAAATCTCACTCACTTCCAAG--CGCTGGAAAAC--C-G-T-GAAAACTGGCGAA------AAATAGC--GCTTAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACAA----AATTGGATAAATAAATGATTTTC-----------------ATGAGTGATTTAACGC---TG--GATTGG---------TTCCTCCTCAGGTCAGCGCATGTTTGGCACCCACGGCGCCAGGATGCTGGCTGCTCAAAAG
droBip1 scf7180000396708:3777161-3777441 + G---GCCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTTTATCTTACTCACTTTCAAG--CGCCGAAAAAC--C-G-T-AAAATCTGGGGAA------AAATAGC--GCCGAGTGAGGTTATATAAGCTTATGTCATAGCAAAAC-AAAG-----GACAA----AATTGAATAAATAATTGATTT-----------------TAACCAGTGATTTAACTA---TG--GATTGG---------TTCCTCCGCAGGTCAGCGCATGTTTGGCACCCATGGCGCCAGGTTGCTGGCCGCCCAAAAG
droKik1 scf7180000302639:1021208-1021496 + G---GCCGCAAACATGTCGCTAACTATGCGAATTTTCAACGCATCGCGCAATGGTTAGTGAGTTTCCTAAAGGTT----TCCCCCCGCTCTCA------GCGCGATTCGTGG--AAC--C-GTT-CAAAATTCCGTAG------AAATCGC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACCA----AATCGG-TCATATAAAGCTTC----CCGGC-GATGTATAAAGGCGCGATTTAATGG---CA--AAATGA---------CTCGCCCGCAGGTCAGCGCATGTTTGGCAGCCAAGGGGCCCGGCTGATGGCCGCA---CGG
droFic1 scf7180000452523:1035334-1035614 - G---GCCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGCTCAGCT--T---------CCCCATTACCTC--------TTGAC--TCCCGGAAAAT--C---C-GAATTTTCCGTAG------AAACTGC--TCCAAATGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATTGGCTTATTTACAAAATACCCTTAAATA------TTTAAATGTGATTTAATGG---CA--AAATGT---------TTTCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCTGTCTTTTTGCCGCCAAACGC
droEle1 scf7180000491080:1439379-1439659 - G---GCCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACA--A---------GCGTCTTAGCTC--------TAGCC--CTCCGAAAATT--C---C-AAAATTTCCCTTG------AAATACC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GCCAA----AATGGACTAATTTGAGGATTCTTATTGCAAA------TAAGACTGTGATTTAATGG---TA--TAATGT---------GTCCCCCATAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGCCTGCTGGCCGCCCAGCGA
droRho1 scf7180000758667:67182-67462 - G---GCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACA--A---------TCCTCCCACCTC--------TTGAT--AGCCGGTAAAC--C---C-AAAATTTCAGTGA------AATTTGC--ATCGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATGGGATAATTTGATGATCCTTATTGCAAA------AAAGAATGTAAATTAATGG---TA--TAATGT---------GTCTCCCATAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGCCTGTTGGCCGCCCAGCGA
droBia1 scf7180000302136:1264285-1264576 - G---GCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCAAGCA-A---------TACCCCCACCTCTTTCCCTCTCGAT--TTCCGGAAAAC--CCG-T-GAAAAATCCATGA------AAATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATTGGCTTATTCGAGGATGGTTTTTGGTTT------AGACTCTGTAAATCAATGG---AT--AAATGT---------TTTCCCCGCAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGTCTGCTGGCCGCCCAGCGA
droTak1 scf7180000415170:59239-59530 + G---GCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCCAGCA-A---------ACCCCACATCTCCTTCCCTCTAGAT--CAGCTGAAAAT--CCG-T-GAAAAATGCATAA------AAATTGC--GCCCAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATGGGCTTATTTGAGGATTATATTTGCTTA------AGAGGCTGTAAATTAAAAG---TT--TATTAC---------CTCCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGCGCCCGTCTGCTGGCCGCCCAGCGC
droEug1 scf7180000409797:1875658-1875937 + G---GCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCGTCGCGCAATGGTAGGTGGCAAACA--A---------TACCCTCACCTC--------GCGAT--ACGCGAAAAAC--T---T-AAACTTTCCCAGG------AAATCTTTGTCTCTGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATGAGCTCAATTCAGGATTCTTATTGCTTA------GACCGTTGCAATTTAATTT---AA--AAATGA---------ATTTCCCACAGGTCAGCGCATGTTTGGGAGCCAAGGAGCCCGTCTGCTGGC---CCAGCGA
dm3 chr3R:11662479-11662761 - G---GTCGCAAAAATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTGGCGACCC--A---------TCCCCTCACATCCG------TTGTT--TTCCGGGAAAT--T---T-CCCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GTCTA----AACTCGCTTAATTCAGTATAACTTTTCGACT------TAAGCATGTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCAGCCATGGAGCCCGGCTGCTGGCCGCCCAGCGA
droSim2 3r:9583529-9583813 + G---GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCC--A---------TCCCCTCACATCCG------TTGTT--TTCCGGGAAAT--T---T-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GTCTA----AACTCGCTTATTTGTGTATAACTATTCGACT----TATAACGTGCTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCACGCATGGAGCCCGTCTGCTGGCCGCCCAGCGT
droSec2 scaffold_0:10291967-10292249 + G---GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCC--A---------TCCCCTCACATCCG------TTGTT--TTCCGGGAAAT--T---T-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GTCTA----AACTCGCTTATTTGTGTATAACTATTCGACT------TAAGTACGTTATTTAATTG---TA--AAATGT---------TCTCCCAACAGGACAGCGCCTGTTTGGCAGCCATGGCGCCCGTCTGCTGGCCGCCCAGCGA
droYak3 3R:14774719-14775001 + G---GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGAGACAC--A---------ACACCTCACATCCA------TCGTT--TTCCGGAATAT--C---T-AAAATTTCCGTGA------AAATCAC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GACTA----AATTCGCTTATTTGAGGATTACTTTCCGATT------GAAGAATGTAACTTAATGG---TA--AAATGT---------GCTCCCTACAGGACAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGA
droEre2 scaffold_4770:11187299-11187582 - G---GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGCGACCC--A---------ACCCCTCACATCCT------TCGTT--TTCCGGGAAAT--C---TAAAAATTTCCGTGA------AAATCGC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AATA-----GACTA----AATTCGCTTATTTGAAGATTAATTTCCGTTT------TAAGAATATAATTTAATAG---TA--AAATGT---------GCTCCCCACAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGA
dp5 2:20341211-20341501 - ----GCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGTTGGGCAGTAGCTTGCCTTGCACTCAAAGC--------GCGAC--ATGCGAAATAC--C---C-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AAGTGGCCAATTAT-TGTTCC----GCGGC-GGCTCACACAAGTGCACTGTATTGA---CG--ATATGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGG
droPer2 scaffold_3:3092702-3092992 - ----GCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGCTGGGCAGTAGCTTGCCTTGCACTCAAAGC--------GCGAC--ATGCGAAATAC--C---C-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AAGTGGCCAATTAT-TGTTCC----GCGGC-GGCTCACACAAGTGCACTGTATTAA---CG--ATAGGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGG
droWil2 scf2_1100000004943:15805787-15806071 + G---GCCGTCAACATGTCGCTTACAATGCGAATTTTCAATGCATCGCGCAATGGTTAGTGCTTAA----A---------ACACTTGATCGCCCTCA------TT--GTCCATTTAATCGA-A-T-ATAATTGGCAAAAAAGTAACA-ATGA--GTTATGTTAGGTTATGTAAGCTTATGTCATAGAAAAAC-AATTTGGCAGTCTATAAAAAA----------CAGAATTATT------------------GTTGCAAAATAATAA---CA--AAATGTCGTTCATTCGTTTCCATCAGGTCAGCGCATGTTTGGGACCCAAGGAGCTCGCATGCTGGCCGCTAAAAGG
droVir3 scaffold_12855:5730672-5730932 + dvi_4094 GTGTGCCGCAAACATGTCGCTAACAATGCGAATTTTCACAGTATCGCGCAATGGTTAGTGAAAAGCT--G---------GGCTTTCAATTAAT--------TCA--ATTCGATAAAC--A---T----ATTTATATTC------AAA-TTC--ATTAAATGAGGTTACGTAACCTTATGTCATAGTAAATC-AGAT-----------------TTGCTAGTGTCAATT-TTTT---GC---------------TTGGATTCAATAA---TATAATATGT---------TTTCTGCACAGGTCAGCGGATGTTTGGCACTAACGGCGCACGTATGCTGTCTGCCAATAGA
droMoj3 scaffold_6540:6054410-6054670 + T---GCCGCAAACATGTCGCTAACAATACGTATTTTCACACTCTCGCGTAATGGTTAGTAAAAGAACAGTGTCAATCATTAAT------------------ACA--ATATAATAAAC--A---C-A--ATTATGGT--------TCATTTA--ATCGAATGAGGTTATGTAACCTTATGTCATAGAGAAAACAAAT------C---------TTCAATAATTTCAAGTTTACTATTTGAA------------------TCAAATAA---TA--TAATGA---------TTTCTAATCAGGTCAGCGCATGTTTGGCACCAATGGCGCACGCCTGTTTGCCGCCCAAAAG
droGri2 scaffold_14906:8272865-8273138 - T---GCCGTAAACATGTCGCTAACAATGCGAATTTTCACAGCATCGCGCCATGGTTAGTGTCTAATT--A---------TCGTA----------------TGCA--TCCAATTAAAT--T---A---AACAATATTAA------CAATTGTTAATTTTATGAGGTTATGTAACCTTATGTCATAGTAAAGT-AAAG-----CAA------AAATTGCCACTGCTCGGATAATTCTTGATGT------GCCGGATACAATATAATGATAGAA--ATATGA---------TTTGTATGCAGGTCAGCGCATGTTCGGCACTACAGGCGCACGTATGCTGGCTGCCCAGAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
G---GCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTAAATCTCACTCACTTCCAAG--CGCTGGAAAAC--C-G-T-GAAAACTGGCGAA------AAATAGC--GCTTAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACAA----AATTGGATAAATAAATGATTTTC-----------------ATGAGTGATTTAACGC---TG--GATTGG---------TTCCTCCTCAGGTCAGCGCATGTTTGGCACCCACGGCGCCAGGATGCTGGCTGCTCAAAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................TGCGAATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2413.003300000
..............................AATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2013.003300000
.............................GAATTTTCACCGCATCGCGCAAC.........................................................................................................................................................................................................................................................................................................2312.002020000
.............................GAATTTTCACCGCATCGCGC............................................................................................................................................................................................................................................................................................................2012.002020000
......................................................................................................................................................................................................................................................................................................................................CCAGGATGCTGGCTGCTCA....1912.002200000
..............................................................................................................................................................................................C-AAAG-----GACAA----AATTGGAA...................................................................................................................................1811.001000100
.............................GAATTTTCACCGCATCGCGCAATGGTC.....................................................................................................................................................................................................................................................................................................2711.001010000
................................................................................................................................................................................................................................................................................................................CGCATGTTTGGCACCCACGGCG.......................2211.001100000
...........................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTGGCACCCACGGC........................2611.001100000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCACCCACGGCG.......................2811.001100000
.........................ATGCGAATTTTCACCGCATCGCGCAATG........................................................................................................................................................................................................................................................................................................2811.001100000
....................................CACCGCATCGCGCAATGGTC.....................................................................................................................................................................................................................................................................................................2011.001010000
............................CGAATTTTCACCGCATCGCGCAAT.........................................................................................................................................................................................................................................................................................................2411.001100000
...............................ATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................1911.001100000
..........AACATGTCGCTAACTATGCGAA.............................................................................................................................................................................................................................................................................................................................2211.001000001
............................CGAATTTTCACCGCATCGCGC............................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................TCAGCGCATGTTTGGCACCCACGGC........................2511.001100000
................................TTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................1811.001100000
..............................................................................................................................................................................................................................................................GTGATTTAACGC---TG--GATTGG---------TT...........................................................2211.001000010
.....................AACTATGCGAATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2911.001100000
........................................................................................................................................................................................................................................................................................................................TGGCACCCACGGCGCCAGGAT................2111.001100000
.....................................ACCGCATCGCGCAATGGTT.....................................................................................................................................................................................................................................................................................................1911.001000001
.................CGCTAACTATGCGAATTTTCACCGC...................................................................................................................................................................................................................................................................................................................2511.001010000
..............................AATTTTCACCGCATCGCGCAATGGT......................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................TAACGC---TG--GATTGG---------TTCCTCCTCAGGTC...............................................2811.001010000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCA................................1911.001100000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCACCCACGGCGCCAGGAT................2511.001100000
.........................ATGCGAATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCACC..............................2111.001000001
..............................AATTTTCACCGCATCGCGCAATGGTC.....................................................................................................................................................................................................................................................................................................2611.001010000
............CATGTCGCTAACTATGCGAATTTTCACCG....................................................................................................................................................................................................................................................................................................................2911.001100000
.........................................................................................................................................................................................................................................................................................................................................GGATGCTGGCTGCTCAAA..1811.001100000
......................................................................................................................................................................................................................................................................................................................TTTGGCACCCACGGCGCCAGGATGCT.............2611.001100000
.........AAACATGTCGCTAACTATGC................................................................................................................................................................................................................................................................................................................................2011.001010000
....................TAACTATGCGAATTTTCACC.....................................................................................................................................................................................................................................................................................................................2011.001010000
.....................................................GTTAGTGGCGAATGGAAA---------GCTTAAATC....................................................................................................................................................................................................................................................................2711.001000010
...........................................................................................................GCTGGAAAAC--C-G-T-GAAAACTGGC......................................................................................................................................................................................................................2311.001001000
droBip1
G---GCCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTTTATCTTACTCACTTTCAAG--CGCCGAAAAAC--C-G-T-AAAATCTGGGGAA------AAATAGC--GCCGAGTGAGGTTATATAAGCTTATGTCATAGCAAAAC-AAAG-----GACAA----AATTGAATAAATAATTGATTT-----------------TAACCAGTGATTTAACTA---TG--GATTGG---------TTCCTCCGCAGGTCAGCGCATGTTTGGCACCCATGGCGCCAGGTTGCTGGCCGCCCAAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
G---GCCGCAAACATGTCGCTAACTATGCGAATTTTCAACGCATCGCGCAATGGTTAGTGAGTTTCCTAAAGGTT----TCCCCCCGCTCTCA------GCGCGATTCGTGG--AAC--C-GTT-CAAAATTCCGTAG------AAATCGC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACCA----AATCGG-TCATATAAAGCTTC----CCGGC-GATGTATAAAGGCGCGATTTAATGG---CA--AAATGA---------CTCGCCCGCAGGTCAGCGCATGTTTGGCAGCCAAGGGGCCCGGCTGATGGCCGCA---CGGSizeHit CountTotal NormTotal
No Reads
droFic1
G---GCCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGCTCAGCT--T---------CCCCATTACCTC--------TTGAC--TCCCGGAAAAT--C---C-GAATTTTCCGTAG------AAACTGC--TCCAAATGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATTGGCTTATTTACAAAATACCCTTAAATA------TTTAAATGTGATTTAATGG---CA--AAATGT---------TTTCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCTGTCTTTTTGCCGCCAAACGCSizeHit CountTotal NormTotal
No Reads
droEle1
G---GCCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACA--A---------GCGTCTTAGCTC--------TAGCC--CTCCGAAAATT--C---C-AAAATTTCCCTTG------AAATACC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GCCAA----AATGGACTAATTTGAGGATTCTTATTGCAAA------TAAGACTGTGATTTAATGG---TA--TAATGT---------GTCCCCCATAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGCCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotal
No Reads
droRho1
G---GCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACA--A---------TCCTCCCACCTC--------TTGAT--AGCCGGTAAAC--C---C-AAAATTTCAGTGA------AATTTGC--ATCGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATGGGATAATTTGATGATCCTTATTGCAAA------AAAGAATGTAAATTAATGG---TA--TAATGT---------GTCTCCCATAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGCCTGTTGGCCGCCCAGCGASizeHit CountTotal NormTotal
No Reads
droBia1
G---GCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCAAGCA-A---------TACCCCCACCTCTTTCCCTCTCGAT--TTCCGGAAAAC--CCG-T-GAAAAATCCATGA------AAATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATTGGCTTATTCGAGGATGGTTTTTGGTTT------AGACTCTGTAAATCAATGG---AT--AAATGT---------TTTCCCCGCAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotal
No Reads
droTak1
G---GCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCCAGCA-A---------ACCCCACATCTCCTTCCCTCTAGAT--CAGCTGAAAAT--CCG-T-GAAAAATGCATAA------AAATTGC--GCCCAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATGGGCTTATTTGAGGATTATATTTGCTTA------AGAGGCTGTAAATTAAAAG---TT--TATTAC---------CTCCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGCGCCCGTCTGCTGGCCGCCCAGCGCSizeHit CountTotal NormTotal
No Reads
droEug1
G---GCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCGTCGCGCAATGGTAGGTGGCAAACA--A---------TACCCTCACCTC--------GCGAT--ACGCGAAAAAC--T---T-AAACTTTCCCAGG------AAATCTTTGTCTCTGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AATGAGCTCAATTCAGGATTCTTATTGCTTA------GACCGTTGCAATTTAATTT---AA--AAATGA---------ATTTCCCACAGGTCAGCGCATGTTTGGGAGCCAAGGAGCCCGTCTGCTGGC---CCAGCGASizeHit CountTotal NormTotal
No Reads
dm3
G---GTCGCAAAAATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTGGCGACCC--A---------TCCCCTCACATCCG------TTGTT--TTCCGGGAAAT--T---T-CCCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GTCTA----AACTCGCTTAATTCAGTATAACTTTTCGACT------TAAGCATGTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCAGCCATGGAGCCCGGCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCCGGC.................24110.00100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
................................................................................................................................................................................................................................................................................................................................ATGGAGCCCGGCTGCTGGCCGCCC.....2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGGCTG...............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CAGCGCCTGTTTGGCAGCCATGGAGC......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
G---GTCGCAAAAATGTCGCT........................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATGCGAATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAAAAATGTCGCTAACTATGCGAAT............................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCGCCTGTTTGGCAGCCA............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGCCTGTTTGGCAGCCA............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCCGGCTGC..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................CCTGTTTGGCAGCCATGGAGCC.....................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
............AATGTCGCTAACTATGCGAAT............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGCCTGTTTGGCAGCCATGGA........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTGGCAGCCATGGAGCCCGGCTGCTGG...........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCGCTAACTATGCGAATTTTCACCGCA..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGCAAAAATGTCGCTAACTAT..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATGCGAATTTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCGCTAACTATGCGAATTTTCACCGC...................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCAACGGTAGGTGGCGACCC--A---------..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................TATGCGAATTTTCACCGCATC................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CACCGCATCGCGCAACGG.......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........AAAAATGTCGCTAACTATGC................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................TGCGAATTTTCACCGCATCGCGC............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CATGGAGCCCGGCTGCTGGCCGCC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CAGCGCCTGTTTGGCAGC..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATGCGAATTTTCACCGCATCGC..............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................GAATTTTCACCGCATCGC..............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTCGCTAACTATGCGAAT............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGGCTGC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAAATGTCGCTAACTATGCGAATTTT.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTCGCAAAAATGTCGCTAACTATGC................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCGCCTGTTTGGCAGCC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAAAAATGTCGCTAACTA...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AACTATGCGAATTTTCACCGC...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................AACTATGCGAATTTTCAC......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTTTCACCGCATCGCGCAACGGA......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATGGAGCCCGGC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............GTCGCTAACTATGCGAATTTTCAC......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AATGTCGCTAACTATGCGAATTTTCAC......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACGGTAGGTGGCGACCC--A---------TCC...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................TCGCTAACTATGCGAATTTTCA.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAATTTTCACCGCATCGCGCAACG........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGTCGCTAACTATGCGAATT...........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAAAAATGTCGCTAACTATGCGAATT...........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGGC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............AATGTCGCTAACTATGCGAATTTTCACC.....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GGCAGCCATGGAGCCCGGCT................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGCCTGTTTGGCAGCCATGGAGCCC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTTTCACCGCATCGCGCAACG........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AACTATGCGAATTTTCACC.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................AAAAC-AAAA-----GTCTA----AACT.......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
G---GTCGCAAAAATGTCGCTAACT....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAACTATGCGAATTTTCACCGCATCGCGC............................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AACTATGCGAATTTTCACCGCATCGCGC............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCGCCTGTTTGGCAGCCAT...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....................AACTATGCGAATTTTCACCG....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAATTTTCACCGCATCGCG.............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................ATTTAATGG---TA--AAATGT---------TCTCCCCACAG..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCCCGGCTGCTGGCCGCCCA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATG..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGCTAACTATGCGAATTTTCA.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAAATGTCGCTAACTATGC................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................TCTA----AACTCGCTTAATTCAGTA.........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGGAGCCCGGCTGCTGGCCGCC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATGGAGCCCG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................TTAATGG---TA--AAATGT---------TCTCCCCACAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCAGCCATGGAGCCCGGCT................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCCGG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CACCGCATCGCGCAACGGACA....................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCGCATCGCGCAACGGAC.....................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACCGCATCGCGCAACGGACA....................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................ACTCGCTTAATTCAGTCCG.......................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
G---GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCC--A---------TCCCCTCACATCCG------TTGTT--TTCCGGGAAAT--T---T-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GTCTA----AACTCGCTTATTTGTGTATAACTATTCGACT----TATAACGTGCTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCACGCATGGAGCCCGTCTGCTGGCCGCCCAGCGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................TGTTTGGCACGCATGGAGCCCGTCTGC..............2712.00200000000002000000
...........................................................................................................................................................................................................................................................................................................................CACGCATGGAGCCCGTCTGCTG............2211.00100100000000000000
......................ACTATGCGAATTTTCACCGCATCGCGC............................................................................................................................................................................................................................................................................................................2711.00100000000001000000
..........................................................................................................................................................................................................................................................................................................GGACAGCGCCTGTTTGGCACGCATGGA........................2711.00100100000000000000
........................................................................................................................................................................................................................................................AACGTGCTTATTTAATGG---................................................................................1811.00100000100000000000
........CAAACATGTCGCTAACTATGC................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.....................................ACCGCATCGCGCAACGGTAGGTTGC...............................................................................................................................................................................................................................................................................................2511.00110000000000000000
droSec2
G---GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCC--A---------TCCCCTCACATCCG------TTGTT--TTCCGGGAAAT--T---T-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GTCTA----AACTCGCTTATTTGTGTATAACTATTCGACT------TAAGTACGTTATTTAATTG---TA--AAATGT---------TCTCCCAACAGGACAGCGCCTGTTTGGCAGCCATGGCGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................ACCGCATCGCGCAACGGTAGGTTG................................................................................................................................................................................................................................................................................................2411.0011000
....................................................................................................................................................................................CATACCAAAAC-AAAA-----GTCTA----...........................................................................................................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................................CATGGCGCCCGTCTGCTGGCCGCCC.....2511.0010010
...............................ATTTTCACCGCATCGCGCAACGGAC.....................................................................................................................................................................................................................................................................................................2511.0010010
.....................................................................................................................................................................................................................................................................................GT---------TCTCCCAACAGGACAGCGCC.........................................2211.0010001
................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATGGCGC......................2311.0010001
................................TTTTCACCGCATCGCGCAACGGACA....................................................................................................................................................................................................................................................................................................2511.0011000
...............................................................................................................................................................................................................................................................................................................................CATGGCGCCCGTCTGCTGGC..........2011.0010010
.........................................CATCGCGCAACGGTAGCG..................................................................................................................................................................................................................................................................................................18100.2020002
droYak3
G---GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGAGACAC--A---------ACACCTCACATCCA------TCGTT--TTCCGGAATAT--C---T-AAAATTTCCGTGA------AAATCAC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AAAA-----GACTA----AATTCGCTTATTTGAGGATTACTTTCCGATT------GAAGAATGTAACTTAATGG---TA--AAATGT---------GCTCCCTACAGGACAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................ATCTATGCGAATCTTCACCGC...................................................................................................................................................................................................................................................................................................................2115.00502120000000
G---GTCGCAAACATGTCGCTATCTATG.................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................ATCTATGCGAATCTTCACCGCATCG...............................................................................................................................................................................................................................................................................................................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................GACAGCGCATGTTTGGCAGCC.............................2111.00101000000000
.......................CTATGCGAATCTTCACCGCATCG...............................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................GATTACTTTCCGATT------GAAGAATGTA............................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................ACAGCGCATGTTTGGCAGCCA............................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................CAGCCATGGAGCCCGTCTGCTG............2211.00100001000000
.......................CTATGCGAATCTTCACCGC...................................................................................................................................................................................................................................................................................................................1911.00101000000000
............CATGTCGCTATCTATGCGAATCTTCACCGC...................................................................................................................................................................................................................................................................................................................3011.00100000010000
..........................................................................................................................................................................................................................................TCCGATT------GAAGAATGTAACTTAATGG---C...............................................................................2711.00100100000000
....................................................................................................................................................................................................................................................................................................................................AGCCCGTCTGCTGGCCGCCCAGCG.2411.00100010000000
...........................................................................................................................................................................................................................................................................................................GACAGCGCATGTTTGGCAGCCATGGA........................2611.00100000010000
................................TCTTCACCGCATCGCGCAACGGACA....................................................................................................................................................................................................................................................................................................2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................GCCATGGAGCCCGTCTGCTGGCCGCCCA....2811.00101000000000
..........................TGCGAATCTTCACCGCATCGCGCAACG........................................................................................................................................................................................................................................................................................................2711.00101000000000
.......................................................................................................................................................................................................................................................................................................................................CCGTCTGCTGGCCGCCCAG...1911.00100000000001
droEre2
G---GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGCGACCC--A---------ACCCCTCACATCCT------TCGTT--TTCCGGGAAAT--C---TAAAAATTTCCGTGA------AAATCGC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAAAAC-AATA-----GACTA----AATTCGCTTATTTGAAGATTAATTTCCGTTT------TAAGAATATAATTTAATAG---TA--AAATGT---------GCTCCCCACAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................ATCTATGCGAATCTTCACCGC...................................................................................................................................................................................................................................................................................................................2112.0022000000
....................TATCTATGCGAATCTTCACCGC...................................................................................................................................................................................................................................................................................................................2212.0021000100
.........................ATGCGAATCTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2512.0022000000
.............................................................................................................................................................................................................................................................................................................................GCCATGGAGCCCGTCTGCT.............1912.0021000010
..........................TGCGAATCTTCACCGCATCGCGCAACGG.......................................................................................................................................................................................................................................................................................................2812.0022000000
......................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGTC.................2211.0011000000
..................................................................................................................................................................................................................................................................................................................CATGTTTGGCAGCCATGGA........................1911.0011000000
.....................ATCTATGCGAATCTTCACC.....................................................................................................................................................................................................................................................................................................................1911.0011000000
......................TCTATGCGAATCTTCACCGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2811.0011000000
.............................GAATCTTCACCGCATCGCG.............................................................................................................................................................................................................................................................................................................1911.0011000000
.............................GAATCTTCACCGCATCGCGCAACG........................................................................................................................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................GCCATGGAGCCCGTCTGCTGG...........2111.0011000000
................................................................................................................................................................................................................................................................................................................CGCATGTTTGGCAGCCATGGAGCCC....................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................AGCCCGTCTGCTGGCCGCCC.....2011.0011000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCC....................2111.0011000000
.............................................................................................................................................................................................................................................................................................................CAGCGCATGTTTGGCAGCCATG..........................2211.0011000000
.............................................................................................................................................................................................................................................................................................................CAGCGCATGTTTGGCAGCCATGGAGC......................2611.0011000000
................................................................................................................................................................................................................................................................................................................CGCATGTTTGGCAGCCATGGA........................2111.0011000000
............................CGAATCTTCACCGCATCGCGCAAC.........................................................................................................................................................................................................................................................................................................2411.0010100000
...........ACATGTCGCTATCTATGC................................................................................................................................................................................................................................................................................................................................1811.0010010000
.....................................ACCGCATCGCGCAACGGTCA....................................................................................................................................................................................................................................................................................................2011.0011000000
....................TATCTATGCGAATCTTCACC.....................................................................................................................................................................................................................................................................................................................2011.0011000000
...................................TCACCGCATCGCGCAACGGTC.....................................................................................................................................................................................................................................................................................................2111.0011000000
G---GTCGCAAACATGTCGCTAT......................................................................................................................................................................................................................................................................................................................................2011.0011000000
......................TCTATGCGAATCTTCACCGCATCGCG.............................................................................................................................................................................................................................................................................................................2611.0011000000
..............................................................................................................................................................................................................................................................................................................AGCGCATGTTTGGCAGCCATGGA........................2311.0011000000
dp5
----GCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGTTGGGCAGTAGCTTGCCTTGCACTCAAAGC--------GCGAC--ATGCGAAATAC--C---C-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AAGTGGCCAATTAT-TGTTCC----GCGGC-GGCTCACACAAGTGCACTGTATTGA---CG--ATATGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTCGCA................................1911.0010100000000
..........GACATGTCGCTTACTATGC................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................TCAGCGCATGTTTCGCACCAATGGCGCC.....................2811.0010100000000
.......................................................................................................................................................................................................................................................................................................................TTCGCACCAATGGCGCCTGCTTGC..............2411.0010100000000
..........................................................................................................................................................................................................................AATTAT-TGTTCC----GCGGC-GG..........................................................................................................1911.0010000000010
.................................................................................................................................................................................................................................................................................ATATGT---------CTCCCCCGCAGGTCA..............................................2111.0010100000000
..............................................................................................................................ACTATTCCATGG------GCATCG.......................................................................................................................................................................................................1811.0010100000000
..............................AATTTTCACAGCATCCCGCA...........................................................................................................................................................................................................................................................................................................2011.0010000100000
.....CCGCAGACATGTCGCTTACTATGCGAATT...........................................................................................................................................................................................................................................................................................................................2911.0010001000000
............................................................................................................................................................................................................................................................................................................TCAGCGCATGTTTCGCACCAATGG.........................2411.0010100000000
........................................................AGTGGTTGGGCAGTAGCTTGC................................................................................................................................................................................................................................................................................2111.0010000001000
.............................................................................................................................................................................................................................................................TGCACTGTATTGA---CG--ATATGT---------CTCCCC.......................................................2711.0010000000010
........CAGACATGTCGCTTACTATG.................................................................................................................................................................................................................................................................................................................................2011.0010000001000
................................................................................GCACTCAAAGC--------GCGAC--ATG................................................................................................................................................................................................................................................1911.0010100000000
.........AGACATGTCGCTTACTATGC................................................................................................................................................................................................................................................................................................................................2011.0010000100000
....................................................................................................................................................................................................................................................................................................................................CGCCTGCTTGCTGGCCGCCAAGCG.2411.0010000100000
.......GCAGACATGTCGCTTACTA...................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................GCACTGTATTGA---CG--ATATG.......................................................................1911.0011000000000
.......................................................................................................................................................................................................................................................................................................................TTCGCACCAATGGCGCCTGCTTG...............2311.0010100000000
........................................................................................................................................................................................................................................................................................................................................TGCTTGCTGGCCGCCAAGCG.2011.0010100000000
droPer2
----GCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGCTGGGCAGTAGCTTGCCTTGCACTCAAAGC--------GCGAC--ATGCGAAATAC--C---C-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAAAAC-AAAG-----GACTA----AAGTGGCCAATTAT-TGTTCC----GCGGC-GGCTCACACAAGTGCACTGTATTAA---CG--ATAGGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......CGCAGACATGTCGCTTACTA...................................................................................................................................................................................................................................................................................................................................2012.002200000
...........................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTCGCA................................1811.001100000
.............................................................................................................................................................................................................................................................................................................CAGCGCATGTTTCGCACCAATGGC........................2411.001001000
.......GCAGACATGTCGCTTACTAT..................................................................................................................................................................................................................................................................................................................................2011.001010000
.........AGACATGTCGCTTACTATGC................................................................................................................................................................................................................................................................................................................................2011.001010000
................................................................................................................................TATTCCATGG------GCATCGC--AT..................................................................................................................................................................................................1911.001001000
...........................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTCGCACCAATGGCGC......................2811.001001000
..............................AATTTTCACAGCATCCCGCAAT.........................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTCGCAC...............................1911.001010000
droWil2
G---GCCGTCAACATGTCGCTTACAATGCGAATTTTCAATGCATCGCGCAATGGTTAGTGCTTAA----A---------ACACTTGATCGCCCTCA------TT--GTCCATTTAATCGA-A-T-ATAATTGGCAAAAAAGTAACA-ATGA--GTTATGTTAGGTTATGTAAGCTTATGTCATAGAAAAAC-AATTTGGCAGTCTATAAAAAA----------CAGAATTATT------------------GTTGCAAAATAATAA---CA--AAATGTCGTTCATTCGTTTCCATCAGGTCAGCGCATGTTTGGGACCCAAGGAGCTCGCATGCTGGCCGCTAAAAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................AGGAGCTCGCATGCTGGCCGCT......2212.00201010
......................................................................................................................................................................................................................................................................................................................TTTGGGACCCAAGGAGCTCGC..................2112.00220000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGGACC..............................2112.00201100
.......................................................................................................................................................................................................................................................................................................................TTGGGACCCAAGGAGCTCGCATGCTG............2612.00210010
...................................................................................................................................................................................................................................................................................................................ATGTTTGGGACCCAAGGAGCT.....................2111.00100010
............................................................................................................................................................................................................................................................................................................................ACCCAAGGAGCTCGCATGCTGGCCGCT......2711.00100100
................................................................................................................................................................................................................................................................................................................................AAGGAGCTCGCATGCTGGCC.........2011.00100100
......................................ATGCATCGCGCAATGGTC.....................................................................................................................................................................................................................................................................................................1811.00100010
.....................................................................................................................................................................................................................................................................................................................GTTTGGGACCCAAGGAGCTCGCAT................2411.00101000
.....................................................................................................................................................................................................................................................................................................................GTTTGGGACCCAAGGAGCT.....................1911.00100010
.......GTCAACATGTCGCTTACAA...................................................................................................................................................................................................................................................................................................................................1911.00101000
............................................................................................................................................................................................................................................................................................................................ACCCAAGGAGCTCGCATGCTGGC..........2311.00100010
...............................................................................................................................................................................................................................................................................................................GCGCATGTTTGGGACCCAAGG.........................2111.00100010
........................................................................................................................................................................................................................................................................................................................TGGGACCCAAGGAGCTCGCATGC..............2311.00100100
G---GCCGTCAACATGTCGCTTACAAT..................................................................................................................................................................................................................................................................................................................................2411.00101000
.............................GAATTTTCAATGCATCGCGCA...........................................................................................................................................................................................................................................................................................................2111.00101000
............................CGAATTTTCAATGCATCGCGC............................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................CAAGGAGCTCGCATGCTGGCCGCT......2411.00100010
..............................................................................................................................................................................................................................................................................................................................CCAAGGAGCTCGCATGCTGGC..........2111.00100100
.............................GAATTTTCAATGCATCGCGCAATGGT......................................................................................................................................................................................................................................................................................................2611.00100010
.........CAACATGTCGCTTACAATGC................................................................................................................................................................................................................................................................................................................................2011.00100010
...................CTTACAATGCGAATTTTCA.......................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................................................................................................................................................................CAAGGAGCTCGCATGCTGGCCGCTAAAA..2811.00100100
.................................................................................................................................................................................................................................................................................................................................AGGAGCTCGCATGCTGGCCGCTAAAAG.2711.00101000
droVir3
GTGTGCCGCAAACATGTCGCTAACAATGCGAATTTTCACAGTATCGCGCAATGGTTAGTGAAAAGCT--G---------GGCTTTCAATTAAT--------TCA--ATTCGATAAAC--A---T----ATTTATATTC------AAA-TTC--ATTAAATGAGGTTACGTAACCTTATGTCATAGTAAATC-AGAT-----------------TTGCTAGTGTCAATT-TTTT---GC---------------TTGGATTCAATAA---TATAATATGT---------TTTCTGCACAGGTCAGCGGATGTTTGGCACTAACGGCGCACGTATGCTGTCTGCCAATAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................GAATTTTCACAGTATCGCGCAA..........................................................................................................................................................................................................................................................................................................2213.003001000000000000001100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CGGCGCACGTATGCTGTCTGCC......2212.002001000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTAAA...........................2412.002000000000000000000000010000000000000100000000000000000000000000
.....................AACAATGCGAATTTTCACAGT...................................................................................................................................................................................................................................................................................................................2112.002000000000000001000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CGCACGTATGCTGTCTGCCAATAGA2512.002000000000000000101000000000000000000000000000000000000000000000
..GTGCCGCAAACATGTCGCT........................................................................................................................................................................................................................................................................................................................................1912.002000000000000001000100000000000000000000000000000000000000000000
....GCCGCAAACATGTCGCTAACAATGC................................................................................................................................................................................................................................................................................................................................2512.002001100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCACTAACGGCGCACGTATGCT.............2811.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCGGATGTTTGGCACTAACGGC........................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAACGGCGCACGTATGCTGTCTGCCA.....2611.001000000000000000000100000000000000000000000000000000000000000000
......................ACAATGCGAATTTTCACAGT...................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AATC-AGAT-----------------TTGCTAGTGTCAATT-T.......................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................GCGGATGTTTGGCACTAACGGCG.......................2311.001001000000000000000000000000000000000000000000000000000000000000
........................AATGCGAATTTTCACAGTATCGCG.............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................CCTTATGTCATAGTAAATC-AGAT-----------------TTGC....................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATTCGATAAAC--A---T----ATTTATA......................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTTTGGCACTAACGGCGCACGTATGC..............2711.001000000000000000000000000100000000000000000000000000000000000000
................................TTTTCACAGTATCGCGCAA..........................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
....................................CACAGTATCGCGCAATGGTC.....................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
..GTGCCGCAAACATGTCGCTAACAATGC................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................TAACAATGCGAATTTTCACAGTATCG...............................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GATGTTTGGCACTAACGG.........................1811.001000000000000000000000000000000000000000000000000000000000000100
..............................AATTTTCACAGTATCGCGCAAT.........................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CGGCGCACGTATGCTGTCTGCCA.....2311.001000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GATGTTTGGCACTAACGGCG.......................2011.001000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................TGGCACTAACGGCGCACGTA.................2011.001000000000000000000100000000000000000000000000000000000000000000
....................TAACAATGCGAATTTTCACAGTAT.................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTAAC...........................2411.001000100000000000000000000000000000000000000000000000000000000000
.......GCAAACATGTCGCTAACAATGCGAAT............................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............TGTCGCTAACAATGCGAATTTTCA.......................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CAGCGGATGTTTGGCACT..............................1811.001000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................ACGGCGCACGTATGCTGTCT.........2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTTGGCACTAACGGCGCACGTA.................2211.001000000000000000000000010000000000000000000000000000000000000000
.....................AACAATGCGAATTTTCACAGTATCG...............................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
................................................CAATGGTTAGTGAAAAGCT--G---------G.............................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
...............................................GCAATGGTTAGTGAAAAGCT--G---------GGC...........................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTA.............................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GTTTGGCACTAACGGCGCACG...................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
T---GCCGCAAACATGTCGCTAACAATACGTATTTTCACACTCTCGCGTAATGGTTAGTAAAAGAACAGTGTCAATCATTAAT------------------ACA--ATATAATAAAC--A---C-A--ATTATGGT--------TCATTTA--ATCGAATGAGGTTATGTAACCTTATGTCATAGAGAAAACAAAT------C---------TTCAATAATTTCAAGTTTACTATTTGAA------------------TCAAATAA---TA--TAATGA---------TTTCTAATCAGGTCAGCGCATGTTTGGCACCAATGGCGCACGCCTGTTTGCCGCCCAAAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................TATTTTCACACTCTCGCGTAAT.........................................................................................................................................................................................................................................................................................................2211.001100000
...............................ATTTTCACACTCTCGCGT............................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................CGAATGAGGTTATGTAACC...............................................................................................................................................................................1911.001100000
.........................ATACGTATTTTCACACTCTCGCGT............................................................................................................................................................................................................................................................................................................2411.001000001
.............................GTATTTTCACACTCTCGCGT............................................................................................................................................................................................................................................................................................................2011.001000001
......CGCAAACATGTCGCTAACAATA.................................................................................................................................................................................................................................................................................................................................2211.001000001
T---GCCGCAAACATGTCGCTAACAATACG...............................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................................................................GGCACCAATGGCGCACGCCTGTT.............2311.001100000
.....................................................................................................................................................................................................................................................................................................................GTTTGGCACCAATGGCGCACGCCTGTT.............2711.001100000
.........AAACATGTCGCTAACAATACGT..............................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................................................................................................................................................................................................................................................TGGCGCACGCCTGTTTGCC.........1911.001100000
.............................GTATTTTCACACTCTCGCGTAAT.........................................................................................................................................................................................................................................................................................................2311.001000001
......CGCAAACATGTCGCTAACAATACGT..............................................................................................................................................................................................................................................................................................................................2511.001001000
..........................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGC.................................1811.001100000
...........................................................................................................................................................................................................................................................................................................................CACCAATGGCGCACGCCTGTT.............2111.001100000
............................CGTATTTTCACACTCTCGCGTAAT.........................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
T---GCCGTAAACATGTCGCTAACAATGCGAATTTTCACAGCATCGCGCCATGGTTAGTGTCTAATT--A---------TCGTA----------------TGCA--TCCAATTAAAT--T---A---AACAATATTAA------CAATTGTTAATTTTATGAGGTTATGTAACCTTATGTCATAGTAAAGT-AAAG-----CAA------AAATTGCCACTGCTCGGATAATTCTTGATGT------GCCGGATACAATATAATGATAGAA--ATATGA---------TTTGTATGCAGGTCAGCGCATGTTCGGCACTACAGGCGCACGTATGCTGGCTGCCCAGAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:26 AM