ID:

dan_2988

 Coordinate:

scaffold_13340:9329915-9330065 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.6

Flybase annnotation

exon [dana_GLEANR_18194:6]; CDS [Dana\GF16928-cds]; intron [Dana\GF16928-in]

Repeatable elements

NameClassFamilyStrand
(T)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_13117:5348215-5348241 +
  2. dan_2988  scaffold_13340:9329979-9330005 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCCAAACCAAAAACCAATTCAATCCCCAACCCACATAATACCAAAAAAAAAAAACCAACCAACAAAACAGCAACATTTCATAATCTTTACCTAACTTTCAAACTACCTAAAAAAAAAAAAAACAAGAAAAAAAAAATTTAAAAATACCAACCAATACAAATCGAAATACAAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGAGGGGCCCCAC
**************************************************************************************************************.........................................(((.....((((..............))))...)))...************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V106
head
 V039
embryo
...........................................................................................................................................................................................................GCACTGCATCACCGGGCACAC........................... 21 0 1 2.00 2 0 2 0 0 0
...........................................................................................................................................................................................................GCACTGCACCACCGGGCACACA.......................... 22 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................CAGCACCACGCCGCACGAGGGG...... 22 0 1 1.00 1 0 0 0 1 0
...................................................................................................................................................................................................................................ACCACGCCGCACGAGGGGCCC... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................GCACCACGCCGCACGAGGGGC..... 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................AAATACCAACCAATACAAACCAAC..................................................................................... 24 3 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................AAATGGCGGCTATTATACAGG................................................. 21 0 1 1.00 1 0 1 0 0 0
........................................ACCACAAAAAAAGAACCAACCAA............................................................................................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................CTGGGCACACAGCACCACGCCGCACGAGG........ 29 1 1 1.00 1 1 0 0 0 0
.................................................AAAAAACCAACCAACAAAACAGCAACAT.............................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................GCACCACGGCGCACGAGGGG...... 20 1 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................ACAGGCGCACTGCATCACCGG................................. 21 0 1 1.00 1 0 1 0 0 0
..............................................AAAAAAAAACCCACCAACAAAACC..................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................CACTGCATCACCGGGCACAC........................... 20 0 1 1.00 1 1 0 0 0 0
..................................................AAAAACCAACCCACAAAACA..................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................AAACAGGATTGAAGGGCAGCT........................................................... 21 3 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................................................GCACCACGCCGCACGAGGGG...... 20 0 1 1.00 1 0 1 0 0 0
................................................AAAAAAACCAACCAACACAACC..................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................CAAAACAGGATTAAATGGCGG............................................................. 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................GCACACAGCACCACGCCGCAC............ 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................AAAAAAAAAAAAACAAGAAAAAAAAAA.................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
..................................................................................................TCAATCTACCTTAAAAAAAAAAA.................................................................................................................................. 23 2 2 0.50 1 1 0 0 0 0
.............................................AAAAAAAAAACCAACCCACA.......................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
.............................................AAAAAAGAAACCAACCACCAAAA....................................................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0
....................................................AAGCCAACCAACAAAACACCACCA............................................................................................................................................................................... 24 3 2 0.50 1 1 0 0 0 0
...............................................AAAAGAAACCAACCAACAAA........................................................................................................................................................................................ 20 1 2 0.50 1 1 0 0 0 0
............................................AAAAAAAAAAACCAACCCACA.......................................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
.................................................................AAACAGCCCCTTTTCATAATCT.................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 1
..........................................CAAAACTAAAAAACCAACCAA............................................................................................................................................................................................ 21 2 3 0.33 1 1 0 0 0 0
..............................................AAAAAAAAACCAGCCCACAAAA....................................................................................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0
..........................................CAAAAAAAAAAAACCAACCAC............................................................................................................................................................................................ 21 1 4 0.25 1 1 0 0 0 0
............................................AAAAAAAGAAACCAACCAAC........................................................................................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0
............................................AAAGAAAAAAACCAACCCACCAAA....................................................................................................................................................................................... 24 3 4 0.25 1 1 0 0 0 0
............................................AAAAAAAAAAACCAACCACCA.......................................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0
....................................................................................................AAACCACCTAAAACAAAAAAAACC............................................................................................................................... 24 3 5 0.20 1 1 0 0 0 0
.................................................................................................................AAAAAAAAAACAAGAAAAAAAAGATGT............................................................................................................... 27 2 5 0.20 1 1 0 0 0 0
.............................................ATAAAAAAAACCAACCAACACA........................................................................................................................................................................................ 22 2 5 0.20 1 1 0 0 0 0
...............................................AAAAAAACGCAACCAACAAAAC...................................................................................................................................................................................... 22 2 5 0.20 1 1 0 0 0 0
............................................AAAAAAAAAAACCAACCAACC.......................................................................................................................................................................................... 21 1 5 0.20 1 1 0 0 0 0
.....................................................................................................................AAAAAACAAGAAAAAAAAAA.................................................................................................................. 20 0 10 0.20 2 1 0 0 0 1
.............................................AAAAAAAAAACCAACCACCA.......................................................................................................................................................................................... 20 1 5 0.20 1 1 0 0 0 0
...............................................AAAAAAAACCAACCGTCAGAAC...................................................................................................................................................................................... 22 3 5 0.20 1 1 0 0 0 0
..................................................ATAAACCAACGAACAAAACACCA.................................................................................................................................................................................. 23 3 6 0.17 1 1 0 0 0 0
..........................................CAAAAAAAAACAACCAACCA............................................................................................................................................................................................. 20 1 6 0.17 1 1 0 0 0 0
............................................AAAAAAAAAAACCAACCACC........................................................................................................................................................................................... 20 1 6 0.17 1 1 0 0 0 0
............................................AAAGAAAAAAACCAACCCAC........................................................................................................................................................................................... 20 2 12 0.17 2 2 0 0 0 0
..........................................CGAAAAAAAAAGACCACCCAAC........................................................................................................................................................................................... 22 3 6 0.17 1 1 0 0 0 0
...........................................GAAAAACAAAAACCAACCAACA.......................................................................................................................................................................................... 22 2 7 0.14 1 1 0 0 0 0
...........................................AAAAACAAAAAACCAACCAAGAA......................................................................................................................................................................................... 23 2 7 0.14 1 1 0 0 0 0
................................................AAAAAAACCAACCAAGAGAA....................................................................................................................................................................................... 20 2 7 0.14 1 1 0 0 0 0
..............................................ATAAAAAAACCAACCTACAAA........................................................................................................................................................................................ 21 2 7 0.14 1 1 0 0 0 0
..............................................AAAAAGAAACCAACCACCAAA........................................................................................................................................................................................ 21 2 8 0.13 1 1 0 0 0 0
..........................................CAAGAAAAAACAACCAACCA............................................................................................................................................................................................. 20 2 16 0.13 2 2 0 0 0 0
............................................AAAAAAAAAACCCAACCACCA.......................................................................................................................................................................................... 21 2 16 0.13 2 2 0 0 0 0
...........................................AAAAAAAATAAACCAACCA............................................................................................................................................................................................. 19 1 8 0.13 1 1 0 0 0 0
...................................................................................................................................................................................................................................ATTACGCCGCGCGAGGGGC..... 19 3 8 0.13 1 0 0 0 0 1
...............................................CAAAAAAACCAACCCACAAAA....................................................................................................................................................................................... 21 2 8 0.13 1 1 0 0 0 0
.........................................CCAAACAAAAAGAACCATCCAA............................................................................................................................................................................................ 22 3 8 0.13 1 1 0 0 0 0
...............................................................................................................AAAAAAAAACAACAAGAAAAAAAAAA.................................................................................................................. 26 1 8 0.13 1 1 0 0 0 0
..................................................AAAAACCAACCAACACCACA..................................................................................................................................................................................... 20 2 8 0.13 1 1 0 0 0 0
..............................................................................................................................................AAATACCAACCCATACCAA.......................................................................................... 19 2 8 0.13 1 0 0 0 0 1
.....................................................................................................AACCACCTAAAAAAAAAAAAA................................................................................................................................. 21 1 8 0.13 1 1 0 0 0 0
................................................................................................................AAAAAAAAGAACAGGAAAAAAAAAAT................................................................................................................. 26 2 9 0.11 1 0 0 0 0 1
...........................................AAAAAAAAAAACCCAACCACCA.......................................................................................................................................................................................... 22 2 9 0.11 1 1 0 0 0 0
.........................................CCAAAAAAAAACACCCAACCA............................................................................................................................................................................................. 21 2 9 0.11 1 1 0 0 0 0
..............................................AAAAACAAACCAACCAACA.......................................................................................................................................................................................... 19 1 9 0.11 1 1 0 0 0 0
...........................................GAAAAAAAAAAACCAACCAACC.......................................................................................................................................................................................... 22 2 9 0.11 1 1 0 0 0 0
............................................TAAAAAAAAAACCAACCACCAA......................................................................................................................................................................................... 22 2 9 0.11 1 1 0 0 0 0
..................................................GAAAACCAACCAACAAAA....................................................................................................................................................................................... 18 1 9 0.11 1 1 0 0 0 0
.............................................AAAAAAAAAACCAACCAACC.......................................................................................................................................................................................... 20 1 9 0.11 1 1 0 0 0 0
.............................................AAAAAAAAAACAACCCAACATAACA..................................................................................................................................................................................... 25 3 10 0.10 1 1 0 0 0 0
...................................................................................................CAATCTACCTACCAAAAAAAAAAA................................................................................................................................ 24 3 10 0.10 1 1 0 0 0 0
.............................................AAAAAAAAACCCAACCACCA.......................................................................................................................................................................................... 20 2 20 0.10 2 2 0 0 0 0
..........................................GAAAAAAAAAAAACCAACCA............................................................................................................................................................................................. 20 1 10 0.10 1 1 0 0 0 0
....................................................................................................................AAAAAAACAAGAAAAAAA..................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0
..............................................AAAAAAAAACCAACCACCA.......................................................................................................................................................................................... 19 1 10 0.10 1 1 0 0 0 0
.............................................................................................................AAAAAGAAAAAAAACAAGAAAAAA...................................................................................................................... 24 1 11 0.09 1 1 0 0 0 0
...............................................AGAAAAAACCAACCAAAAAAAC...................................................................................................................................................................................... 22 2 11 0.09 1 1 0 0 0 0
.........................................................AACCAACAAAGCAGCACCA............................................................................................................................................................................... 19 2 12 0.08 1 1 0 0 0 0
..................................................AAAAACCAACCTCCAAAACAGA................................................................................................................................................................................... 22 3 12 0.08 1 1 0 0 0 0
....................................................AAACCAACCAACAAAAAACCA.................................................................................................................................................................................. 21 2 13 0.08 1 1 0 0 0 0
................................................................................................TTTCAATCTACCTTAAAAA........................................................................................................................................ 19 2 14 0.07 1 1 0 0 0 0
.................................................................................................................................AAAAAACCTTTAAAAATACCA..................................................................................................... 21 2 14 0.07 1 1 0 0 0 0
...............................................AAAAAAAACCAACCAACCA......................................................................................................................................................................................... 19 1 15 0.07 1 1 0 0 0 0
............................................AAAAAAAAAAACCAACCCACCA......................................................................................................................................................................................... 22 2 15 0.07 1 1 0 0 0 0
...........................................AAAAAAACAAAACCAACCA............................................................................................................................................................................................. 19 1 16 0.06 1 1 0 0 0 0
...................................................AAAACCCAAGAACAAAACAGCA.................................................................................................................................................................................. 22 3 16 0.06 1 0 0 0 0 1
...............................................................................................................AAAAGAAAAAAACAAGAAAAAAAA.................................................................................................................... 24 1 17 0.06 1 1 0 0 0 0
..............................................AAAAAATAACCAACCAACACCA....................................................................................................................................................................................... 22 3 17 0.06 1 1 0 0 0 0
..........................................CAAAAAAAAAAGACCCACCA............................................................................................................................................................................................. 20 2 18 0.06 1 1 0 0 0 0
..........................................CAAAAAACAAAGGCCAACCAAC........................................................................................................................................................................................... 22 3 18 0.06 1 1 0 0 0 0
............................................AAAAAAAAAAACCATCCAA............................................................................................................................................................................................ 19 1 18 0.06 1 1 0 0 0 0
............................................AAAAAAAAAAATTAACCAACAAACC...................................................................................................................................................................................... 25 3 19 0.05 1 1 0 0 0 0
............................................AAAAAAACAAACCAACCACCA.......................................................................................................................................................................................... 21 2 19 0.05 1 1 0 0 0 0
........................................AGAAAAAAAAAAAAACCGACCAACA.......................................................................................................................................................................................... 25 3 19 0.05 1 1 0 0 0 0
..............................................................................................................AAATGAAAAAAAACAAGAAAAAA...................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0
...........................................................................................................CTAAAAAGAAAAAAAACAACAAAAGA...................................................................................................................... 26 3 20 0.05 1 1 0 0 0 0
...................................ATAAAACCAAAAAAAAAAAAC................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
.............................................AAAAAAAAAACCAAACAACA.......................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
..................................................................................................................AAAAAAAAACAAGAAAAAA...................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..................................................................................................................AAAAAAAAACAAGAAAGAAAAAA.................................................................................................................. 23 1 20 0.05 1 0 0 0 0 1
.................................................................................................................AAAAAAAAAACAAGAACAAAAA.................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0
...............................................AAAAAAAACCAACCAAAAAAA....................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
..................................................GAATACCAACCAACAAAA....................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0
.................................................................................................................AAAAAAAAAACAAGAAAAA....................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
............................................AAAACAAAAAACCAACCAACACC........................................................................................................................................................................................ 23 3 20 0.05 1 1 0 0 0 0
............................................AAAAAAAAAAACCACCCAA............................................................................................................................................................................................ 19 1 20 0.05 1 1 0 0 0 0
................................................AAAAAACCCCACCAACAAAA....................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
.................................................................................................................AAAAAAAAAACAAGGAAAAAAAAA.................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0
..................................................................................................................AAAGAAAAACAAGAAAAAACAAA.................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0
...............................................................................................................TAAAAAAAAAGACAAGAAAAAAAAA................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0
..............................................AAAAAAAAACCAACCAACCAC........................................................................................................................................................................................ 21 2 20 0.05 1 1 0 0 0 0
...............................................................................................................AAAAAAAAAACACAAGAAAAAA...................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0
............................................AAAAAAGAAAACCAACCACC........................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
............................................AAATAAAAAAACCAACCCACCA......................................................................................................................................................................................... 22 3 20 0.05 1 1 0 0 0 0
...................................................................................................................AAAAAAAGCAAGAAAAAAAAAA.................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0
............................................AAAAAGAAAAACCAACCCAC........................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
.............................................AAACAAAAAACCAACCACCA.......................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
..............................................AAAAAAGAACCAACCACCA.......................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0
.................................................................................................................AAAAAAACAACAAGGAAAAAAAA................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0
................................................................................................TTTCAATCTACCTCGAAAAA....................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0
................................................................................................................AAAAAAAAAAACACGAAAAAAAAA................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
..................................................AACAACCAACCAAGAAAACA..................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0
.................................................................................................................AAAAAAAAAACAAGAAAAAA...................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.................................................AAAAAACCAACCTACACCACA..................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0
.............................................AAAAAAAAAACCAACCAAAAGAA....................................................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0
..............................................................................................................AAAACAAAAAAAACAAGAAAAAAGA.................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TAGGTTTGGTTTTTGGTTAAGTTAGGGGTTGGGTGTATTATGGTTTTTTTTTTTTGGTTGGTTGTTTTGTCGTTGTAAAGTATTAGAAATGGATTGAAAGTTTGATGGATTTTTTTTTTTTTTGTTCTTTTTTTTTTAAATTTTTATGGTTGGTTATGTTTAGCTTTATGTTTTGTCCTAATTTACCGCCGATAATATGTCCGCGTGACGTAGTGGCCCGTGTGTCGTGGTGCGGCGTGCTCCCCGGGGTG
*************************************************************.........................................(((.....((((..............))))...)))...************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 V106
head
 M044
female body
 V039
embryo
 V055
head
 M058
embryo
................TTAAGTTAGGGGTTGGGTGTA...................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................TTAGAAATGGGTTGAGAGTTT.................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................CGCGTGACGTAGTGGCCAGTG............................. 21 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................GACGTAGTGGCCCGTGTGTCG........................ 21 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GTGGCCCGTGTGTCGTGGTGC.................. 21 0 1 1.00 1 0 0 1 0 0 0
..........................................................TGGTTGTTTTGTCGTTGTA.............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
............................................................GTTGTTTTGTCGTTGTAAAGT.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................................................................................................CGCGTGACGTAGTGGCCCGTG............................. 21 0 1 1.00 1 0 1 0 0 0 0
..................................................TATTTGGTTGGTGGTTTTGTCCTT................................................................................................................................................................................. 24 3 2 0.50 1 0 0 0 1 0 0
.....................................................TTGGTGGGTTGTTGTGTCGTT................................................................................................................................................................................. 21 2 3 0.33 1 0 0 0 0 1 0
.............TGGGTAAGTGAGGGGTTGG........................................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0
..................................................................TTGTGGATGTAAAGTATTA...................................................................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0
.........................................GGTTGTTTTATCTTGGTTGG.............................................................................................................................................................................................. 20 3 20 0.10 2 1 0 0 0 0 1
.......................AGGGGGTGGGTGTATTAGG................................................................................................................................................................................................................. 19 2 11 0.09 1 0 0 0 0 1 0
........................................TGGTTGTTTTATCTTGGTTGG.............................................................................................................................................................................................. 21 3 12 0.08 1 0 0 0 0 0 1
................TTCTGTTAGGGGCTGGGTGT....................................................................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 1 0
.......................................................................................AATGGATTGGAAGTTGGAC................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................TTGTGCTTTTTTTTTTAAACTAT........................................................................................................... 23 3 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................................................................GCGTGACGGAGGGGCCCGA.............................. 19 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:9329865-9330115 - dan_2988 AT-C------CAAACCAAAAACCAATTCAA---TCCCCAA--CCC-------------------------------------ACATAATACCAAAAAAAAAAAACCAACCAA---------------------------------------------CAAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAAAC----------TACCTAAAAAAA--A-----AAAAAACAAGAAAAAAAAAATTTAAAAATACCAACCAA-TA-----C-AAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGAGGGGCCCCAC
droBip1 scf7180000396712:2951106-2951306 - AT-C------CAAATC---------------------CCC--CCC-------------------------------------ACATAATACCA----------A------AA---------------------------------------------CAAAACAGCAACATTTCATAA-TCTTTATCCTAACTTTCAA-C----------TACC-------AAAAAACCAA-A--------------------AAAAATACCAACCAAATA----CA-AAATCGAAATACCAAAATACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACGCCGCACGAGGGGCCCCAC
droKik1 scf7180000302634:820290-820478 + TC---------GAAACCAACA---AT----------TCTC---CC-------------------------------------ACATAATACCA----------A--AACCAACA--------------------------------------------AAAACAGCAACATTTCATAACTTTTTA-CCTAACTTTCAA-C----------TACC-------AA---------------------------------AATATGA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACGCCGCACGATGGTCCCCAC
droFic1 scf7180000453800:1313595-1313785 + A---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AATCA----------------AACCAAACAGCAACATTTCATAT-TCT-TA-CCTAACTTTCAA-C----------TACC-------AAAATACCAA-AT-------------------ACCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGTCCCCAC
droEle1 scf7180000486474:148261-148450 + ----------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC-----------------------------------------AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------AAAATACCAA-ATACCA---------------ATCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGTCCACAC
droRho1 scf7180000778053:61760-61932 + ----------------------------------------------------------------------------------ACATAATACCA----------A-----------------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------AA-ATACCAA-AT-------------------ACCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGTCCCCAC
droBia1 scf7180000299102:1103554-1103733 - -----------------------------------------------------------------------------------CATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAAAATACCA---------------ATCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGCCCCCAC
droTak1 scf7180000415653:12589-12786 - CA----------A------------TTCA-------------------------------------GAACCCGAT-AAAAACACATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAA-AT-------------------ACCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGCCCCCAC
droEug1 scf7180000409802:1176933-1177144 - CA----------ACTC------------A----------------------------GAACCTTCAGAACCCGATTAAAAACACATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-CCAA-------TACC-------A--ATACCAAAAT-------------------ACAAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGCCCCCAC
dm3 chr3R:8850391-8850595 + C---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AACCA---------ACC----AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-CCAATATCAAATACC-------AA-ATACCAA-AT-------------------ACCAATACCA-----------ACCAAAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCAC
droSim2 3r:12314679-12314869 - -----------------------------------------------------------------------------------CATAATACCA----------ACCAACCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-CCAATATCAAATACC-------AA-ATACCAA-AT-------------------ACCAATACCA-----------ACCAAAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCAC
droSec2 scaffold_0:13146042-13146232 - AA------------------------------------------------------------------------------ACACATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TATTTA-CCTAACTTTCAA-CCAATATCAAATACC-------AA-ATACCA--AT-------------------ACCAATACCA-----------ACCAAAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCAC
droYak3 3R:13145417-13145626 + TC--------------------------A----------------------------GAAC--TCAGAA-CCGAT---AAACACATAATACCA----------ACCAACCAACA--------------------A-------------ACC----AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAA-AT-------------------ACCAATACCA-----------ACA-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGCCCCCAC
droEre2 scaffold_4770:12798337-12798529 - C---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AACCA---------ACC----AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAA-AT-------------------ACCAATACCA-----------ACA-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCAC
dp5 2:11317998-11318198 - dps_474 AA-T------CGAATCAAAAA---A--------TCTTCTC--CCCA-----CATAAACAAAAAAA-----------------AAAAAAAACAA--------------------------------------------------------------AAAAAACCAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-A----------TAC------------------------------------------AAATACAA-----------AAAACAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGTCCCCAC
droPer2 scaffold_0:9197699-9197892 + AA-T------CGAATCAAAAA---A--------TCTTCTC--CCC-------------------------------------ACATAAAACAAA--------A----A-CAAAA-----------------------------------------AAAAAACCAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-A----------TAC------------------------------------------AAATACAA-----------AAAACAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGTCCCCAC
droWil2 scf2_1100000004902:11587640-11587851 + CC---------AATATAAAAATCAAT-------TCCTCTCCCCTC-------------------------------------ACATAATATATA--------TA----CCAA---------------------------------------------CAGAACAGCAACATATCATTA-TCTATACCCTAACTATATA-A----------AAAA-------AAAA-----AAAAAACA---------------AAAAATACAAACCA---------A-AAATCGAAATAT---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGTACCACATCGCACGATGGTCCCCAC
droVir3 scaffold_12855:3965363-3965581 - dvi_3818 CT-CTATAATTGAAACTA-------CCCTACATTAAACTC---CCACATTCC--------------------------------------CAAA--------A----A-CAAAAAAAAAACGAA---------------AGAAAACAAACA----AGATAAACAGCAACATATTATTA-ACTTTA-CCTAAAT---------------------------------ACCAA------------------------AAATACAA-----------ACA-AAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGTCCCCAC
droMoj3 scaffold_6540:8272361-8272552 - AT-T------CAACTCCCA-A---C-----------TCTTTCCTC--------TAAAGAATATTA-----------------AGATAATACCA----------A----------------------------------------------------GATAAACAGCAACATATTATTA-ACTTTA-CCTAAAT------------------------------------------------------------------ACCAACCGAATACAAA-C-AAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCAACATCGGGCACACAGCACCACACCGCACGATGGTCCCCAC
droGri2 scaffold_14906:6586427-6586651 - AAAC------CAAATCAAA-----A--------CCACCTA--CCTC-----CTTAAAAAA----------------------AAATAAAA------------------------------AGAAACAACAGACAAATCAAGAAAACAAAAAAAAAAAAAAAACAGCAACATATTATTA-ACTTTA-CCAATAA---------------------------------ACAAA-AT-------------------ACCAATACAA---------------AAATCGAAATAC-AAAATACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCATGATGGTCCACAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AT-C------CAAACCAAAAACCAATTCAA---TCCCCAA--CCC-------------------------------------ACATAATACCAAAAAAAAAAAACCAACCAA---------------------------------------------CAAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAAAC----------TACCTAAAAAAA--A-----AAAAAACAAGAAAAAAAAAATTTAAAAATACCAACCAA-TA-----C-AAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGAGGGGCCCCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................GCACTGCATCACCGGGCACAC...........................2112.002200000
..........................................................................................................................................................................................................................................................................................................................................................CAGCACCACGCCGCACGAGGGG......2211.001000001
..............................................................................................................................................................................................................................................................................................................................................................ACCACGCCGCACGAGGGGCCC...2111.001010000
............................................................................................................................................................................................................................................................................................................................................................GCACCACGCCGCACGAGGGGC.....2111.001100000
................................................................................................................................................................................................................................................................................................................AAATGGCGGCTATTATACAGG.................................................2111.001100000
..................................................................................................AAAAAACCAACCAA---------------------------------------------CAAAACAGCAACAT...........................................................................................................................................................................................................2811.001010000
................................................................................................................................................................................................................................................................................................................................ACAGGCGCACTGCATCACCGG.................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................CACTGCATCACCGGGCACAC...........................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................GCACCACGCCGCACGAGGGG......2011.001100000
.................................................................................................................................................................................................................................................................................................C---AAAACAGGATTAAATGGCGG.............................................................2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................GCACACAGCACCACGCCGCAC............2111.001100000
........................................................................................................................................................................................................................AAAAAA--A-----AAAAAACAAGAAAAAAAAAA............................................................................................................................2720.501010000
...........................................................................................CAAAAAAAAAAAACCAACCAC---------------------------------------------.........................................................................................................................................................................................................................2140.251010000
.............................................................................................AAAAAAAAAAACCAACCAA---------------------------------------------CC.......................................................................................................................................................................................................................2150.201010000
......................................................................................................................................................................................................................................AAAAAACAAGAAAAAAAAAA............................................................................................................................20100.202011000
..............................................................................................AAAAAAAAAACCAACCAA---------------------------------------------CC.......................................................................................................................................................................................................................2090.111010000
................................................................................................................................................................................................................................A-----AAAAAACAAGAAAAAAA...............................................................................................................................18200.102020000
............................................................................................................................................................................................................................AA--A-----AAAAAACAAGAAAAAA................................................................................................................................19200.051010000
...........................................................................................................................................................................................................................AAA--A-----AAAAAACAAGAAAAA.................................................................................................................................19200.051010000
...........................................................................................................................................................................................................................AAA--A-----AAAAAACAAGAAAAAA................................................................................................................................20200.051010000
droBip1
AT-C------CAAATC---------------------CCC--CCC-------------------------------------ACATAATACCA----------A------AA---------------------------------------------CAAAACAGCAACATTTCATAA-TCTTTATCCTAACTTTCAA-C----------TACC-------AAAAAACCAA-A--------------------AAAAATACCAACCAAATA----CA-AAATCGAAATACCAAAATACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACGCCGCACGAGGGGCCCCACSizeHit CountTotal NormTotal
No Reads
droKik1
TC---------GAAACCAACA---AT----------TCTC---CC-------------------------------------ACATAATACCA----------A--AACCAACA--------------------------------------------AAAACAGCAACATTTCATAACTTTTTA-CCTAACTTTCAA-C----------TACC-------AA---------------------------------AATATGA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACGCCGCACGATGGTCCCCACSizeHit CountTotal NormTotal
No Reads
droFic1
A---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AATCA----------------AACCAAACAGCAACATTTCATAT-TCT-TA-CCTAACTTTCAA-C----------TACC-------AAAATACCAA-AT-------------------ACCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGTCCCCACSizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC-----------------------------------------AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------AAAATACCAA-ATACCA---------------ATCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGTCCACACSizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------------------ACATAATACCA----------A-----------------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------AA-ATACCAA-AT-------------------ACCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGTCCCCACSizeHit CountTotal NormTotal
No Reads
droBia1
-----------------------------------------------------------------------------------CATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAAAATACCA---------------ATCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGCCCCCACSizeHit CountTotal NormTotal
No Reads
droTak1
CA----------A------------TTCA-------------------------------------GAACCCGAT-AAAAACACATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAA-AT-------------------ACCAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGCCCCCACSizeHit CountTotal NormTotal
No Reads
droEug1
CA----------ACTC------------A----------------------------GAACCTTCAGAACCCGATTAAAAACACATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-CCAA-------TACC-------A--ATACCAAAAT-------------------ACAAATACCA-----------ACC-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACGCCGCACGATGGCCCCCACSizeHit CountTotal NormTotal
No Reads
dm3
C---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AACCA---------ACC----AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-CCAATATCAAATACC-------AA-ATACCAA-AT-------------------ACCAATACCA-----------ACCAAAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................CACAGCACCACACCGCACGATGGCCCC...2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAC---AATCCAGGATTAAATGGCGGCTA..........................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000
..............................................................................................................................................................................................................................................................................................................TTAAATGGCGGCTATTATACAG..................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000
...............................................................................................................................................................................................................................................................................................TAC---AATCCAGGATTAAATGGCGGC............................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................AAAATCGAAATAC---AATCCAGG.........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACCGGGCACACAGCACCACACC................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCCAGGATTAAATGGCGGCTATTATAC....................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................ATAC---AATCCAGGATTAAATGGCGGC............................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000
...............................................................................................................................................................................................................................................................................................................TAAATGGCGGCTATTATACAG..................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AATCCAGGATTAAATGGCGG.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCACCGGGCACAC...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAC---AATCCAGGATTAAATGGCG..............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAGGATTAAATGGCGGCTATT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................C---AATCCAGGATTAAATGGCGG.............................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AAATGGCGGCTATTATACAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CACCACACCGCACGATGGCCCCCA.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCACCGGGCA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................A-ATACCAA-AT-------------------ACCAATACCA-----------AC..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AGGATTAAATGGCGGCTATTATACA...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TTCATAA-TCTTTA-CCTAACTTTCAA-CC.............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GCGCACTGCATCACCGGGCACACAGCT.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AAATGGCGGCTATTATACAGG.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CACTGCATCACCGGGCACAC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCACCGGGCACACAGCACCA....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AAATGGCGGCTATTATAC....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTCAA-CCAATATCAAATACC-------AA-ATACC.................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TGGCGGCTATTATACAGGCGC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................A---------ACC----AACCAAACAGCAACATTTCATAA-TC.................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAC---AATCCAGGATTAAATGGCGGCTAT.........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................TTTA-CCTAACTTTCAA-CCAATATC.......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AA-CCAATATCAAATACC-------AA-ATACCAA-AT-------------------ACCA.....................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CACACAGCACCACACCGCACG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GATTAAATGGCGGCTATTATAC....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AATAC---AATCCAGGATTAAATGGCGGC............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................ACCAAAATCGAAATAC---AA...............................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CACAGCACCACACCGCACGATGGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AGGCGCACTGCATCACCGGGCACA............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................AATGGCGGCTATTATACAGGC................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AATCCAGGATTAAATGGCGGC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAC---AATCCAGGATTAAATGGCGGCT...........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCACCACACCGCACGATGG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TAACTTTCAA-CCAATATCAAATACC-------AA-A.....................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCACCGGGCAC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TATTATACAGGCGCACTGCAT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CCAATACCA-----------ACCAAAATCGAAATAC---AA...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TCACCGGGCACACAGCACCAC...................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACCGGGCACACAGCACCACACCGCAC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CACAGCACCACACCGCACGATGG.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
C---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AACCA---------A.................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................A-TCTTTA-CCTAACTTTCAA-CC.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AATACCA----------ACCAACCAACC--------------------AAC.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCACCGGGCACACA..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCCAGGATTAAATGGCGGC............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TACAGGCGCACTGCATCACCGGGCA..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATCACCGGGCACACAGCACCACACCGC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ATAC---AATCCAGGATTAAATGGCG..............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATGGCGGCTATTATACAGGCG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................AAATGGCGGCTATTATAG....................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CCAACC--------------------AACCA---------ACC----AACCAA.....................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCA----------ACCAACCAACC--------------------AACCA---------ACC----AACCAA.....................................................................................................................................................................................................................29110.0910000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CA----------ACCAACCAACC--------------------AACCA---------ACC----AAC........................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCA----------ACCAACCAACC--------------------AACCA---------ACC----AAC........................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AACCAACC--------------------AACCA---------ACC----AACCAA.....................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CA----------ACCAACCAACC--------------------AACCA---------ACC----AACCA......................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CAACCAACC--------------------AACCA---------ACC----...........................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CCAACCAACC--------------------AACCA---------ACC----...........................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCA----------ACCAACCAACC--------------------AACCA---------ACC----AA.........................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ACCAACCAACC--------------------AACCA---------ACC----AACCAA.....................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CCAACC--------------------AACCA---------ACC----AACCA......................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................A----------ACCAACCAACC--------------------AACCA---------ACC----AA.........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ACCAACC--------------------AACCA---------ACC----AACCA......................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................ACCA----------ACCAACCAACC--------------------AACC............................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCA----------ACCAACCAACC--------------------AACCA---------ACC----A..........................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CCAACCAACC--------------------AACCA---------ACC----AACC.......................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACCA----------ACCAACCAACC--------------------AACCA---------ACC----AACC.......................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ACCAACCAACC--------------------AACCA---------ACC----AAC........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CA----------ACCAACCAACC--------------------AACCA---------ACC----AACC.......................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-----------------------------------------------------------------------------------CATAATACCA----------ACCAACCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-CCAATATCAAATACC-------AA-ATACCAA-AT-------------------ACCAATACCA-----------ACCAAAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................ACCAACCAA---------------------------------------------CCAAACAGC................................................................................................................................................................................................................1821.00200001100000000000
....................................................................................ATAATACCA----------ACCAACCAA---------------------------------------------CCAAACAGCA...............................................................................................................................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................TGCATCACCGGGCACACAGCACCACAC.................2711.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................GCACTGCATCACCGGGCAC.............................1911.00100000000001000000
droSec2
AA------------------------------------------------------------------------------ACACATAATACCA----------A----CCAA---------------------------------------------CCAAACAGCAACATTTCATAA-TATTTA-CCTAACTTTCAA-CCAATATCAAATACC-------AA-ATACCA--AT-------------------ACCAATACCA-----------ACCAAAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TC--------------------------A----------------------------GAAC--TCAGAA-CCGAT---AAACACATAATACCA----------ACCAACCAACA--------------------A-------------ACC----AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAA-AT-------------------ACCAATACCA-----------ACA-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGCCCCCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................AGCACCACACCGCACGATGGCCC....2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................TACAGGCGCACTGCATCATCGGGCACA............................2711.00100100000000
..............................................................................................................AACA--------------------A-------------ACC----AACCAAACAGCA...............................................................................................................................................................................................................2011.00101000000000
.................................................................................................................................................................................................................................................................................................................AATGGCGGCTATTATACAGGC................................................2111.00101000000000
...............................................................................................................................................................................................................................................................CAATACCA-----------ACA-AAATCGAAATAC---AATC.............................................................................2711.00101000000000
droEre2
C---------------------------------------------------------------------------------ACATAATACCA----------ACCAACCAACC--------------------AACCA---------ACC----AACCAAACAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-C----------TACC-------A--ATACCAA-AT-------------------ACCAATACCA-----------ACA-AAATCGAAATAC---AATCCAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCACCGGGCACACAGCACCACACCGCACGATGGCCCCCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................ATAC---AATCCAGGATTAAATGGC...............................................................2211.0010001000
............................................................................................A----------ACCAACCAACC--------------------AACCA---------ACC----...........................................................................................................................................................................................................................20200.0511000000
dp5
AA-T------CGAATCAAAAA---A--------TCTTCTC--CCCA-----CATAAACAAAAAAA-----------------AAAAAAAACAA--------------------------------------------------------------AAAAAACCAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-A----------TAC------------------------------------------AAATACAA-----------AAAACAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGTCCCCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................ACTGCATCATCGGGCACACA..........................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................CACAGCACCACACCGCACGAT.........2111.0010100000000
.........................................................................................................................................................................................................................................................................................................CAGGATTAAATGGCGGCTATT........................................................2111.0010000000010
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCATCGGGCAC.............................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................GCACTGCATCATCGGGCACA............................2011.0010100000000
............................................................AAAAA-----------------AAAAAAAACAA--------------------------------------------------------------AAAAAA.....................................................................................................................................................................................................................22200.0510010000000
droPer2
AA-T------CGAATCAAAAA---A--------TCTTCTC--CCC-------------------------------------ACATAAAACAAA--------A----A-CAAAA-----------------------------------------AAAAAACCAGCAACATTTCATAA-TCTTTA-CCTAACTTTCAA-A----------TAC------------------------------------------AAATACAA-----------AAAACAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGTCCCCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................CACTGCATCATCGGGCACACAG.........................2211.001010000
.....................................................................................................................................................................................................................................................................................................................................CGCACTGCATCATCGGGC...............................1811.001100000
...........................................................................................................................................................................................................................................................................................................................ATTATACAGGCGCACTGC.........................................1811.001100000
......................................................................................................................................................................................................................................................................................................................................GCACTGCATCATCGGGCAC.............................1911.001100000
droWil2
CC---------AATATAAAAATCAAT-------TCCTCTCCCCTC-------------------------------------ACATAATATATA--------TA----CCAA---------------------------------------------CAGAACAGCAACATATCATTA-TCTATACCCTAACTATATA-A----------AAAA-------AAAA-----AAAAAACA---------------AAAAATACAAACCA---------A-AAATCGAAATAT---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGTACCACATCGCACGATGGTCCCCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................GCACTGCATCATCGGGCACACA..........................2211.00101000
.................................................................................................................................................................................................................................................................................................T---AAAACAGGATTAAATGGCGGC............................................................2211.00100100
........................................................................................................................................................................................................................................................................................................................................ACTGCATCATCGGGCACA............................1830.33110000
droVir3
CT-CTATAATTGAAACTA-------CCCTACATTAAACTC---CCACATTCC--------------------------------------CAAA--------A----A-CAAAAAAAAAACGAA---------------AGAAAACAAACA----AGATAAACAGCAACATATTATTA-ACTTTA-CCTAAAT---------------------------------ACCAA------------------------AAATACAA-----------ACA-AAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCACGATGGTCCCCACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................GGCGCACTGCATCATCGGGCAC.............................2211.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GCACTGCATCATCGGGCACACA..........................2211.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ACAGCACCACACCGCACGAT.........2011.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TACAGGCGCACTGCATCATCGG.................................2211.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CCACACCGCACGATGGTCCCC..2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AT-T------CAACTCCCA-A---C-----------TCTTTCCTC--------TAAAGAATATTA-----------------AGATAATACCA----------A----------------------------------------------------GATAAACAGCAACATATTATTA-ACTTTA-CCTAAAT------------------------------------------------------------------ACCAACCGAATACAAA-C-AAATCGAAATAC---AAAACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCAACATCGGGCACACAGCACCACACCGCACGATGGTCCCCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................CCACACCGCACGATGGTCCCC..2111.001100000
.................................................................................................................................................................................................................................................................................................................................................TCGGGCACACAGCACCACACCGC..............2311.001100000
...........................................................................................................................................................................................................................................................................................................GGATTAAATGGCGGCTATTATACAGG.................................................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................ACACAGCACCACACCGCACGAT.........2211.001000001
...T------CAACTCCCA-A---C-----------TCTTTCCTC--------.................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
AAAC------CAAATCAAA-----A--------CCACCTA--CCTC-----CTTAAAAAA----------------------AAATAAAA------------------------------AGAAACAACAGACAAATCAAGAAAACAAAAAAAAAAAAAAAACAGCAACATATTATTA-ACTTTA-CCAATAA---------------------------------ACAAA-AT-------------------ACCAATACAA---------------AAATCGAAATAC-AAAATACAGGATTAAATGGCGGCTATTATACAGGCGCACTGCATCATCGGGCACACAGCACCACACCGCATGATGGTCCACACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:04 AM