ID:

dan_2950

 Coordinate:

scaffold_13340:7544099-7544249 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.6 -2.4 -2.4

Flybase annnotation

exon [dana_GLEANR_18324:1]; CDS [Dana\GF17056-cds]; intron [Dana\GF17056-in]

Repeatable elements

NameClassFamilyStrand
R1_DYaLINER1+
mature
star
  1. scaffold_12911:2498187-2498206 -
  2. scaffold_12916:12476680-12476699 -
  3. scaffold_13117:2163007-2163026 -
  4. scaffold_13266:15086537-15086556 -
  5. scaffold_13340:937003-937022 +
  6. dan_2950  scaffold_13340:7544178-7544197 -
  7. scaffold_13340:15093420-15093439 -
  8. scaffold_13340:19807092-19807111 +
  9. scaffold_13340:20895618-20895637 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAAGCACAAAGCGCCGCCCAGCGGCAGTCCAAGGACAATGCCCCAGGACAGTTCAACAGCAGGAGCGCGAGATGATTCAGGAGCAGCGGTAGGGGCAGGAGCAGGAGCAGGAGCAGGAGCACTAGCCGGAGAATCTCCCACAACGGAAAGCCAAGAGCAGCATCAGCAGCAGCATCAGTGCCTGCTGCTGGGTCACAGTGCAGCGGGTGCACCCGCAACAGCATCAGCAGCAGCAGCAGCTAGTCGCCTGG
**********************************************************************..((.(((....((....((....((....))....))....))..))))).********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V106
head
 V105
male body		 V055
head
 V039
embryo
 M044
female body
.......................................................................................................................................................................................................................CAACAGCATCAGCAGCAGCAGCAGCT.......... 26 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................CGCAACAGCATCAGCAGCAGCA................ 22 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................CAACGGACAGACAAGAGCAGCCTCAGC.................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
.........................ATTCCAAGGACAATGCCCCAGGACAGTTC..................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
......................................................................GATGATTCAGGAGCAGCGGTAGGGGC........................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
................................................................................................AGGAGCAGGAGCAGGAGCAGGAGCACT................................................................................................................................ 27 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................................................................................................GCACCAGAAGTAGCTAGTC...... 19 3 20 0.20 4 4 0 0 0 0 0
...................................................GAAAACAGCAGGAGCGCGAGA................................................................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 1 0
.........AGCGCCGTGCAACGGCAGTC.............................................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 1 0 0
................................................................................................................................GGGAATCTCCCACAATGGAC....................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 1
......................................................................................................AGGAGCAGGAGCAGGAGCAC................................................................................................................................. 20 0 9 0.11 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GCAACAGCATCAGCAGCAGC................. 20 0 9 0.11 1 0 0 1 0 0 0
......GAAAGCGCGGCCCAGCG.................................................................................................................................................................................................................................... 17 2 10 0.10 1 0 0 0 1 0 0
.............................................................................................GGCAGGAGCAGGAGCAGGA........................................................................................................................................... 19 0 20 0.10 2 0 0 2 0 0 0
........AAGCGCCGGTCAGCGGCAGG............................................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 1 0 0
.............................................................................CTGGAGCAGCGGTATGGG............................................................................................................................................................ 18 2 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................CAACAGCATCAGCAGCAGC................. 19 0 17 0.06 1 1 0 0 0 0 0
........................................................................................................................................................................................................................AACAGCATCAGCAGCAGC................. 18 0 18 0.06 1 1 0 0 0 0 0
..............................................................................................................................................................................................................GTGAACCCGCAACAGCCTCAT........................ 21 3 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................................................................................................................AGCATCAGCAGCAGTAGCAGC........... 21 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GTTCGTGTTTCGCGGCGGGTCGCCGTCAGGTTCCTGTTACGGGGTCCTGTCAAGTTGTCGTCCTCGCGCTCTACTAAGTCCTCGTCGCCATCCCCGTCCTCGTCCTCGTCCTCGTCCTCGTGATCGGCCTCTTAGAGGGTGTTGCCTTTCGGTTCTCGTCGTAGTCGTCGTCGTAGTCACGGACGACGACCCAGTGTCACGTCGCCCACGTGGGCGTTGTCGTAGTCGTCGTCGTCGTCGATCAGCGGACC
*********************************************************************************************************************************..((.(((....((....((....((....))....))....))..))))).********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M044
female body
 M058
embryo
........TTCGCGGCGCGTAGCGGTCA............................................................................................................................................................................................................................... 20 3 1 1.00 1 1 0 0
...................................................................................................................................................................................CGGCCGCCGACCCAGTGT...................................................... 18 2 4 0.25 1 0 1 0
................GGGTCGGCGTTATGTTCCTGT...................................................................................................................................................................................................................... 21 3 6 0.17 1 0 1 0
.................GGTCGGCGTTATGTTCCTGT...................................................................................................................................................................................................................... 20 3 14 0.07 1 0 1 0
..................................................................................................................................................................................TCGGACGACGCCCCATTGT...................................................... 19 3 20 0.05 1 1 0 0
........................................CGGGTCCTGTAAAGTTGT................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:7544049-7544299 - dan_2950 CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACA---GTTCAA--CAG--------------------------------------------------CAGGAGCGCGAGATGAT---TCAGGAGCAGCGGTA-------GG---GGCAGGAGCAGG-----------------------------------------AGCAGGAGCAG----------------GAGCACTAGCCGGAGAATCTCCCACAACGGAAAGCCAAGAG-------------------------------------------------------------------------------------CAGCATCAGCAGCAGCATC-----------------AGTGCCTGCTGCTG---------------------GGTCACAGTG---CAGCGGGTG---------CAC------------------------CCGCAAC----------AGCATCAGCAG------CAGCAGCAGCTAGTCGCC-TGG
droBip1 scf7180000396708:1304988-1305208 + CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACA---GTTCAA--CAG--------------------------------------------------CAGGAGCGCGAGAAGAA---TCAGGAGCAGCGGTA-------AG---GGCAGAAGC----CGGAGAATCTCCCTCAACG-----------------------------------------------------------------------------GAAAGCCAAGAGCAGCAGCAGCA-------------------------------------------------------------------------------------------TCAGT-----------------GCCTGCTCCTG---------------------GGTCACAGTG---CAGCGGGTG---------CAC------------------------CCGAAAC----------AGCATCAGCAG------CAGCAGCAGCTAGTCGCC-TGG
droKik1 scf7180000302475:218985-219166 - CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACACGGCTTCACAATCG------TCA------------------G-----------------------------------------------------------------AGGAGGCAGGAGT----CGGGGAGTCCCCCAC------------------------------------------------------------------------------------------------------CA-------------------------------------------------------------------------------------------A-CGGGGAAGCTCC---------TCTACTGCTG---------------------GGCCACCACGCCCCCGCAGATG---------CCA------------------------CCGCAAC----------T---GCAGCAG------CAACAGCAGCTAGTCGCC-TGG
droFic1 scf7180000453948:484110-484389 - CAAGCA--AATGGCCGAGCAGCACCAG---------CACAAGAAC------------------------------GCCATGG------------------GC-GGCATGGGCGGATTCCCCCGCCCCCGCACG-----------------------------------------------------GCATGAACCCGCAGCAGCAGCAGCAGCAACAGCAGC-AGCAGGCGCAGCAGCAACACGGCCAGA-TGA---TG-----------------------------------------GGACAGGGACAACCGGGTCGG-TACAACGACTACGGAGGTGGCTTCCCCAACGACTTTGGCCTGGGTCCCAACGGGCCGCAG-----------------------------CAGCAGCA-------------------------------------G---CAGCAGGCG---------CAG------------------------CAGCAAC----------AGCAGCAGCAG------CCGCAGCAGCAA--CACC-TGC
droEle1 scf7180000490967:607116-607327 + CAAGCACAAAGCGCCGCCCAGCGGTAG---------TCCAAGGACAATGCCCCAGGACA---TTTCACAATCGGAGCCATCG------------------GACGTGGG---------------------------------------------------------------------------AGGGGACTCCCAATCCACCGCAGCAT-------------C----------------------------------------------------AG--------CAACAGCAGCAGTAGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCGCAGCAGAGCCTGCTGCTG---------------------GGGCACAATC---CAGCGGACT---------CAT------------------------CCG----------C------AGCAGCAG------CAGCAGTAGCTAGTCGCT-TGG
droRho1 scf7180000777880:5393-5604 - CAAGCACAAAGCGCCGCCCAGCAGCAG---------TCCAAGGACAATGCCCCAGGACA---TTTCACAATCGGAGCCATTGGGATTGGAATCGGGATCGGGAGCGGG---------------------------------------------------------------------------AGGGGAATCCCAATCCCC-------------------------------------------------------------------------------------------------AGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCGCAGCAGAGCCTGCTGCTG---------------------GGCCACAATC---CAGCGGACT---------CCT------------------------CCGCAGC----------AGCAACAGCAG------CAGCAGCAGCTAGTCGCC-TGG
droBia1 scf7180000299102:273037-273242 + CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCGCCAGGACA---TTTCCCAATCGGAGCAGTCG------------------GCGGGAAA---------------------------------------------------------------------------CGAGGAGTCCCCAGCAAGAGCAGCAG-------------G----------------------------------------------------AG--------CAA---CAGCAGCAGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCCCAACAGAGCCTGCTCCTG---------------------GGCCACAATC---CCGCGGATG---------GAT------------------------CCG----------C------ATC---AG------CTGCCGCCGCTAGTCGCC-TGG
droTak1 scf7180000415580:339209-339411 - CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACG---TTTCGCAATCGG---------------------------------------------------------------------------------------------------------------GGGAAGCCCCCGCAGCAGCAGCAGCAGGAGGAGCAGA-AGGAGG---------------------------------------------------------------AGCAAAAGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCACAGCAGAGCCTGCTTTTG---------------------GGTCACAATC---CAGCGGATG---------CAG------------------------CAG----------C------AGCAGCAG------CATCGGTAGCTAGTCGCC-TGG
droEug1 scf7180000409557:198964-199160 - CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACA---TTTCACAATCGGAGCCATCG------------------GGGGCAGA---------------------------------------------------------------------------TGGGGAATCCCCCGCAACAGCAGCAG----------------------------------------------------------------------------------CAACAACAACA-------------------------------------------------------------------------------------------GCAGTAGAAACCCCGCAGCAAAGCCTGCTGCTG---------------------GGCCACAATC---CAGAGGATG---------CCT------------------------CTG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGG
dm3 chr3R:12339177-12339373 + CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---ATTCGCAATCGGAGCCATCG------------------GGTGGTAA---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACAACAG----------------------------------------------------------------------------------CGGCAGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGTCTGCTACTG---------------------GGCCACAATG---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGG
droSim2 3r:8910296-8910492 - CAAACACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---ATTCGCAATCGGAGCCATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACAGCAG----------------------------------------------------------------------------------CAGCAGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGCCTGCTACTG---------------------GGCCACAATG---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGG
droSec2 scaffold_12:1808051-1808247 - CAAACACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---ATTCGCAATCGGAGCCATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACAGCAG----------------------------------------------------------------------------------CAGCAGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGCCTGCTACTG---------------------GGCCACAATG---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGG
droYak3 3R:12054865-12055067 - CAAACACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---TTTCGCAATCGGAGCCATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGCAATCCCCCGCAGCACCAACAG----------------------------------------------------------------------------------CAGCAACAGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGCCTGCTACTG---------------------GGCCACAATG---CGGCGGATG---------CCT------------------------CCG----------C------CACTGCAG------CAGCAGTAGCTAGTCGCC-TGG
droEre2 scaffold_4690:5954363-5954604 + CAAAAGCTAA-TGCTGC--AGCAACAG--CAGCAG-C--------AACA---------------------------GCAGC---AGC----------------AA---CAA------------CAGCAGCTGCAGC---AGCAGCAAC---AACAGCA-------GCTACAGCAGCAGCAACA-------ACAGC----------------------------AGC-------------------------TGC---AG-----------------------------------------CAGCAGCAACAACAGCAGCTGCAGCAGCAACAACTG----------------------------------------CA---GCAGCAACTG--------------CAACAACAGCAGCTGCAACTG------CAACAGCAGCTGCAACTGC----AA---CAGCAGCTG---------CAA------------------------CTG----------C------AACAGCAGCAGCAGCAACA-------ACAGCA-GGT
dp5 XL_group1e:3734438-3734684 - CAGGCCAGTAGCGCTGCT-----GCCG--------CCACAGGAATAATGGCGGAGGCAG---AGTCTCAGCAGCAGG--------------------------------AG------------CAGCAGCAGGAGCAGCC---GCAGGAGCAGCAGCA-------GG---AGCAGCAGCAGGA-------GCAGCCGCAGGAGCAGCAG-------------------------------------------------------------------------------------------------CAGGAGGAGCAGCAGGAGCAGCCGCAGGAG----------------------------------------GA-----------------------GCCGCAGCAGCAGGCTCTGTTGCCG---------------------CTGCAGCAGG----CTCCGTTGCCGCAGCAGGAT------------------------CCG----------T------------AT---CAGCAGCAGGGGCCGTATCCGCTGG
droPer2 scaffold_17:667404-667648 - -----ACGAGATGCAGCCCAGCAGCGCTGCTGCCGCCACAGGAATAATGGCGGAGGCAG---AGTCACAGCCGCAGG--------------------------------AG------------CAGCAGCAGGAGCAGCA---GCAGGAGCAGCCGCA-------GG---AGCAGCAGCAGGA-------GCAGCCGCAGGAGCAGCAG----------------------------------------------------------------------------------CAGGAGCAGCA---------------GCAGGAGCAGCCGCAGGAG----------------------------------------CA------------G-----------------CAGCAGGAGCAGCAGCAG---------------------GAGC----AG---CCGCAGGAGCAGCAG---CAG------------------------C----------------AGCAGGAGCAG------CCGCAGCAGCCGGCTCCG-TTG
droWil2 scf2_1100000004511:9337810-9338064 - TAATAATAAATTAATGCC-AGCAACAA---------C-------------------------------AGCAGCAGC--------------------------------AG------------CAACATCAACATCAACA---TCAACAGTATTCACAGCCGGCAGC---------AGAAGCA-------GCAGCAGCAGCAG-------------------------------------------------------------------------------------------------CAGCAGCAGAAATAGCAATAGCAACAGCGACAGCAG------------------------------------TGGCATCTATCAACACC-----------------ATCAGCAAGA---------------------------------GCAACATG----TTCCAAATA--------TGCTAATTAATAGTCAAATATATAAATTATTAACAAATGGCAATAGCAGCAGCAG------CAGTAGCAGTCAATTGCC-TAG
droVir3 scaffold_12970:4854329-4854562 + CAGCAGCAGCAACAAGAGCAGCAGCAG---------CA----------------GCAAC---AACA----------AGAGC---AGC----------------AG---CAG------------CAGCAACAAGAGCGGCA---GCAGCAACAATGACA-------GC---AGCAGCAAAAGCA-------ACAGCAA-----------------------------------------------------TAGCAATGG-----------------------------------------CGG---CAAGAGCAGCAGCAGCAGCAGCAATAGCAG----------------------------------------CA---AGAGCAGCAGCAG-----------------CAGTGGCAGTAGCAG---CGGTAG------------CAGT----AG---CAGCGGTAG---------CAG------------------------TAG----------C------AGTAGCAA------CAGCAACAGCTCAACCAA-TAA
droMoj3 scaffold_6473:10898302-10898533 + GCAGCAGCAACAGCAGC--AGCAGCAG--CAG----C---AGC--AACA---------------------------GCAGC---AGC----------------AG---CAA------------CAGCAGCAGCAGC---AGCAGCAGC---AACAGCA-------GCAGCAGCAGCAGCAGCA-------GCAGC----------------------------AGC-------------------------AGC---AG-----------------------------------------CAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAG----------------------------------------CA---GCAACAACAG--------------------CAGCAACAGCAGCAGCAACAGCAGCAACAGC-------------AG---CAACAGCAG---------CAA------------------------CAG-------------------CAACAG------CAACAACAGCAGTAGCAG-CAA
droGri2 scaffold_15500:1218-1440 - GCAGCAGCAGCAGCAGC--AGCAGCAG---------C--------AGCGGC--AGCAG-------------------CAGC---AG----------------------CAG------------CAGCAGCAGCAGCGGCA---GCAGCAGCAGCGGCA-------GC---AGCAGCAGCAGC-------------AGCAGCAG-----------------------------------------------CAGCAGCAG-----------------------------------------CGG---CAGCAGCAGCAGCGGCAGCGGCAGCGGCAG----------------------------------------CA---GCAGCAGCAGCAG-----------------CAGCAGCAGCAGCGG---CAGCAG------------CAGC----AG---CAGCAGGAG---------CGG------------------------CAG----------C---AGCAGCAGCAG------CAGCAGC---------AG-CAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACA---GTTCAA--CAG--------------------------------------------------CAGGAGCGCGAGATGAT---TCAGGAGCAGCGGTA-------GG---GGCAGGAGCAGG-----------------------------------------AGCAGGAGCAG----------------GAGCACTAGCCGGAGAATCTCCCACAACGGAAAGCCAAGAG-------------------------------------------------------------------------------------CAGCATCAGCAGCAGCATC-----------------AGTGCCTGCTGCTG---------------------GGTCACAGTG---CAGCGGGTG---------CAC------------------------CCGCAAC----------AGCATCAGCAG------CAGCAGCAGCTAGTCGCC-TGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC----------AGCATCAGCAG------CAGCAGCAGCT...........2611.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAC----------AGCATCAGCAG------CAGCA.................2211.001000010
......................................................................................................................................GATGAT---TCAGGAGCAGCGGTA-------GG---GGC....................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.............................................................................................................................................................................AGGAGCAGG-----------------------------------------AGCAGGAGCAG----------------GAGCACT................................................................................................................................................................................................................................................................................................................2720.501000001
...................................................................................................................................................................................AGG-----------------------------------------AGCAGGAGCAG----------------GAGCAC.................................................................................................................................................................................................................................................................................................................2090.111000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC----------AGCATCAGCAG------CAGC..................2090.111000010
..........................................................................................................................................................................GGCAGGAGCAGG-----------------------------------------AGCAGGA...........................................................................................................................................................................................................................................................................................................................................19200.102000020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC----------AGCATCAGCAG------CAGC..................19170.061010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------AGCATCAGCAG------CAGC..................18180.061010000
droBip1
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACA---GTTCAA--CAG--------------------------------------------------CAGGAGCGCGAGAAGAA---TCAGGAGCAGCGGTA-------AG---GGCAGAAGC----CGGAGAATCTCCCTCAACG-----------------------------------------------------------------------------GAAAGCCAAGAGCAGCAGCAGCA-------------------------------------------------------------------------------------------TCAGT-----------------GCCTGCTCCTG---------------------GGTCACAGTG---CAGCGGGTG---------CAC------------------------CCGAAAC----------AGCATCAGCAG------CAGCAGCAGCTAGTCGCC-TGGSizeHit CountTotal NormTotal
No Reads
droKik1
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACACGGCTTCACAATCG------TCA------------------G-----------------------------------------------------------------AGGAGGCAGGAGT----CGGGGAGTCCCCCAC------------------------------------------------------------------------------------------------------CA-------------------------------------------------------------------------------------------A-CGGGGAAGCTCC---------TCTACTGCTG---------------------GGCCACCACGCCCCCGCAGATG---------CCA------------------------CCGCAAC----------T---GCAGCAG------CAACAGCAGCTAGTCGCC-TGGSizeHit CountTotal NormTotal
No Reads
droFic1
CAAGCA--AATGGCCGAGCAGCACCAG---------CACAAGAAC------------------------------GCCATGG------------------GC-GGCATGGGCGGATTCCCCCGCCCCCGCACG-----------------------------------------------------GCATGAACCCGCAGCAGCAGCAGCAGCAACAGCAGC-AGCAGGCGCAGCAGCAACACGGCCAGA-TGA---TG-----------------------------------------GGACAGGGACAACCGGGTCGG-TACAACGACTACGGAGGTGGCTTCCCCAACGACTTTGGCCTGGGTCCCAACGGGCCGCAG-----------------------------CAGCAGCA-------------------------------------G---CAGCAGGCG---------CAG------------------------CAGCAAC----------AGCAGCAGCAG------CCGCAGCAGCAA--CACC-TGCSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGCACAAAGCGCCGCCCAGCGGTAG---------TCCAAGGACAATGCCCCAGGACA---TTTCACAATCGGAGCCATCG------------------GACGTGGG---------------------------------------------------------------------------AGGGGACTCCCAATCCACCGCAGCAT-------------C----------------------------------------------------AG--------CAACAGCAGCAGTAGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCGCAGCAGAGCCTGCTGCTG---------------------GGGCACAATC---CAGCGGACT---------CAT------------------------CCG----------C------AGCAGCAG------CAGCAGTAGCTAGTCGCT-TGGSizeHit CountTotal NormTotal
No Reads
droRho1
CAAGCACAAAGCGCCGCCCAGCAGCAG---------TCCAAGGACAATGCCCCAGGACA---TTTCACAATCGGAGCCATTGGGATTGGAATCGGGATCGGGAGCGGG---------------------------------------------------------------------------AGGGGAATCCCAATCCCC-------------------------------------------------------------------------------------------------AGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCGCAGCAGAGCCTGCTGCTG---------------------GGCCACAATC---CAGCGGACT---------CCT------------------------CCGCAGC----------AGCAACAGCAG------CAGCAGCAGCTAGTCGCC-TGGSizeHit CountTotal NormTotal
No Reads
droBia1
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCGCCAGGACA---TTTCCCAATCGGAGCAGTCG------------------GCGGGAAA---------------------------------------------------------------------------CGAGGAGTCCCCAGCAAGAGCAGCAG-------------G----------------------------------------------------AG--------CAA---CAGCAGCAGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCCCAACAGAGCCTGCTCCTG---------------------GGCCACAATC---CCGCGGATG---------GAT------------------------CCG----------C------ATC---AG------CTGCCGCCGCTAGTCGCC-TGGSizeHit CountTotal NormTotal
No Reads
droTak1
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACG---TTTCGCAATCGG---------------------------------------------------------------------------------------------------------------GGGAAGCCCCCGCAGCAGCAGCAGCAGGAGGAGCAGA-AGGAGG---------------------------------------------------------------AGCAAAAGCA-------------------------------------------------------------------------------------------GCAGTGGAAACCCCACAGCAGAGCCTGCTTTTG---------------------GGTCACAATC---CAGCGGATG---------CAG------------------------CAG----------C------AGCAGCAG------CATCGGTAGCTAGTCGCC-TGGSizeHit CountTotal NormTotal
No Reads
droEug1
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGCCCCAGGACA---TTTCACAATCGGAGCCATCG------------------GGGGCAGA---------------------------------------------------------------------------TGGGGAATCCCCCGCAACAGCAGCAG----------------------------------------------------------------------------------CAACAACAACA-------------------------------------------------------------------------------------------GCAGTAGAAACCCCGCAGCAAAGCCTGCTGCTG---------------------GGCCACAATC---CAGAGGATG---------CCT------------------------CTG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGGSizeHit CountTotal NormTotal
No Reads
dm3
CAAGCACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---ATTCGCAATCGGAGCCATCG------------------GGTGGTAA---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACAACAG----------------------------------------------------------------------------------CGGCAGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGTCTGCTACTG---------------------GGCCACAATG---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................GACA---ATTCGCAATCGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CCCAGCGGCAG---------TCCAAGGACAATGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................GACA---ATTCGCAATCGGAGCCATCG------------------GG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTA..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CCAGCGGCAG---------TCCAAGGACAATGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
......................GGCAG---------TCCAAGGACAATGGCCCAGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AATCGGAGCCATCG------------------GGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................TGGTAA---------------------------------------------------------------------------CGGGGAATCACG..............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCAC........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GGTAA---------------------------------------------------------------------------CGGGGAATCACAA.............................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................GGTAA---------------------------------------------------------------------------CGGGGAATCACAG.............................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................TGGTAA---------------------------------------------------------------------------CGGGGAATCAGT..............................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droSim2
CAAACACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---ATTCGCAATCGGAGCCATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACAGCAG----------------------------------------------------------------------------------CAGCAGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGCCTGCTACTG---------------------GGCCACAATG---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................GGCAA---------------------------------------------------------------------------CGGGGAATCA................................................................................................................................................................................................................................................................................................................................................................................1512.00200000000101000000
..............................................................................ATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGGAATC.................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
droSec2
CAAACACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---ATTCGCAATCGGAGCCATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACAGCAG----------------------------------------------------------------------------------CAGCAGCCGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGCCTGCTACTG---------------------GGCCACAATG---CAGCGGATG---------CCT------------------------CCG----------C------------AG------CAGCAGTAGCTAGTCGCC-TGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................A---------------------------------------------------------------------------CGGGGAATCACCCGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................2311.0010010
droYak3
CAAACACAAAGCGCCGCCCAGCGGCAG---------TCCAAGGACAATGGCCCAGGACA---TTTCGCAATCGGAGCCATCG------------------GGTGGCAA---------------------------------------------------------------------------CGGGCAATCCCCCGCAGCACCAACAG----------------------------------------------------------------------------------CAGCAACAGCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCACAGCAGAGCCTGCTACTG---------------------GGCCACAATG---CGGCGGATG---------CCT------------------------CCG----------C------CACTGCAG------CAGCAGTAGCTAGTCGCC-TGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................GCA-------------------------------------------------------------------------------------------TCCGTGGAAGCCCCAC........................................................................................................................................................1911.00100010000000
......................................................................................................................................................................................................AGCACCAACAG----------------------------------------------------------------------------------CAGCAACA......................................................................................................................................................................................................................................................................1950.20101000000000
droEre2
CAAAAGCTAA-TGCTGC--AGCAACAG--CAGCAG-C--------AACA---------------------------GCAGC---AGC----------------AA---CAA------------CAGCAGCTGCAGC---AGCAGCAAC---AACAGCA-------GCTACAGCAGCAGCAACA-------ACAGC----------------------------AGC-------------------------TGC---AG-----------------------------------------CAGCAGCAACAACAGCAGCTGCAGCAGCAACAACTG----------------------------------------CA---GCAGCAACTG--------------CAACAACAGCAGCTGCAACTG------CAACAGCAGCTGCAACTGC----AA---CAGCAGCTG---------CAA------------------------CTG----------C------AACAGCAGCAGCAGCAACA-------ACAGCA-GGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................AGCAAC---AACAGCA-------GCTACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................TG--------------CAACAACAGCAGCTGCA...........................................................................................................................................1920.5011000000
.............................................................................................................................................CAGCAAC---AACAGCA-------GCTACAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000010
................................................A---------------------------GCAGC---AGC----------------AA---CAA------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000030
......................................................................................C----------------AA---CAA------------CAGCAGCTGCAGC---A.....................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000100
..................................................................................................................................................................................CAACA-------ACAGC----------------------------AGC-------------------------TGC---AG-----------------------------------------CA...................................................................................................................................................................................................................................................................2070.1410000100
..................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCTGCAGCA...........................................................................................................................................................................................................................................2070.1410000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA-------ACAGCA-GG.1990.1111000000
.............................................AACA---------------------------GCAGC---AGC----------------AA---CAA------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000200
......................................................................................................................................................................................................................................................................................................................AACAGCAGCTGCAGCAGCA........................................................................................................................................................................................................................................19130.0810001000
.............................................................................................................AA------------CAGCAGCTGCAGC---AGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................19130.0810001000
......................................................................................................................................................................................A-------ACAGC----------------------------AGC-------------------------TGC---AG-----------------------------------------CAGCA................................................................................................................................................................................................................................................................19130.0810001000
...............GC--AGCAACAG--CAGCAG-C--------AACA---------------------------GCAGC---AGC----------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510100000
...................................................................................................................................GCAGC---AGCAGCAAC---AACAGCA-------GC..........................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100
.....................CAACAG--CAGCAG-C--------AACA---------------------------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
.................................AG-C--------AACA---------------------------GCAGC---AGC----------------AA---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
.............................................AACA---------------------------GCAGC---AGC----------------AA---CAA------------CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000
............................................................................................................................................................................................................................................................GC---AG-----------------------------------------CAGCAGCAACAACAGCAGC..................................................................................................................................................................................................................................................23200.0510000100
dp5
CAGGCCAGTAGCGCTGCT-----GCCG--------CCACAGGAATAATGGCGGAGGCAG---AGTCTCAGCAGCAGG--------------------------------AG------------CAGCAGCAGGAGCAGCC---GCAGGAGCAGCAGCA-------GG---AGCAGCAGCAGGA-------GCAGCCGCAGGAGCAGCAG-------------------------------------------------------------------------------------------------CAGGAGGAGCAGCAGGAGCAGCCGCAGGAG----------------------------------------GA-----------------------GCCGCAGCAGCAGGCTCTGTTGCCG---------------------CTGCAGCAGG----CTCCGTTGCCGCAGCAGGAT------------------------CCG----------T------------AT---CAGCAGCAGGGGCCGTATCCGCTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCG----------T------------AT---CAGCAGCAGGGGCC...........2021.0020000000020
...................................................................................................................................................................................AGGA-------GCAGCCGCAGGAGCAGC..................................................................................................................................................................................................................................................................................................................................................................2160.5030000000030
....................................................................................................................................................................................................................................................................................................................................CAGCCGCAGGAG----------------------------------------GA-----------------------GCCGCA..........................................................................................................................................................2020.5010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTTGCCG---------------------CTGCAGCA..........................................................................................................1920.5010000010000
..................................................................................................................................AGGAGCAGCC---GCAGGAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2160.5030000000030
...............................................................................................................................................................................................CAGCCGCAGGAGCAGCAG-------------------------------------------------------------------------------------------------CAGGAGG........................................................................................................................................................................................................................................................2520.5010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCG---------------------CTGCAGCAGG----CTCC................................................................................................2120.5010100000000
.....................................ACAGGAATAATGGCGGAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000001000
....................................CACAGGAATAATGGCGGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000001000
.........................................................................CAGG--------------------------------AG------------CAGCAGCAGGAGCAGCC---GCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000001000
............................................................................................................................................................CA-------GG---AGCAGCAGCAGGA-------GCAGCCGCC..........................................................................................................................................................................................................................................................................................................................................................................2630.3310000001000
................................................................................................................................................................................................AGCCGCAGGAGCAGCAG-------------------------------------------------------------------------------------------------CAGG...........................................................................................................................................................................................................................................................2140.2510000001000
......................................................................................................................................GCAGCC---GCAGGAGCAGCAGCA-------............................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
........................................................................................................................................AGCC---GCAGGAGCAGCAGCA-------GG---.......................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000001000
..............................................................................................................................................................................................GCAGCCGCAGGAGCAGCAG-------------------------------------------------------------------------------------------------CA.............................................................................................................................................................................................................................................................2140.2510100000000
...........................................................................................................................CAGCAGCAGGAGCAGCC---GCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000001000
............................................................................................................................................................................CAGCAGCAGGA-------GCAGCCGCAG.........................................................................................................................................................................................................................................................................................................................................................................2150.2010000001000
.....................................................................................................................................................................................................CAGGAGCAGCAG-------------------------------------------------------------------------------------------------CAGGAGGA.......................................................................................................................................................................................................................................................2070.1410000001000
.....................................................................................................................................................GCAGCAGCA-------GG---AGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................18200.1020200000000
...............................................................................................................................................................................................................AG-------------------------------------------------------------------------------------------------CAGGAGGAGCAGCAGGAGA............................................................................................................................................................................................................................................21200.0510100000000
droPer2
-----ACGAGATGCAGCCCAGCAGCGCTGCTGCCGCCACAGGAATAATGGCGGAGGCAG---AGTCACAGCCGCAGG--------------------------------AG------------CAGCAGCAGGAGCAGCA---GCAGGAGCAGCCGCA-------GG---AGCAGCAGCAGGA-------GCAGCCGCAGGAGCAGCAG----------------------------------------------------------------------------------CAGGAGCAGCA---------------GCAGGAGCAGCCGCAGGAG----------------------------------------CA------------G-----------------CAGCAGGAGCAGCAGCAG---------------------GAGC----AG---CCGCAGGAGCAGCAG---CAG------------------------C----------------AGCAGGAGCAG------CCGCAGCAGCCGGCTCCG-TTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAG------CCGCAGCAGC............1880.131000010
............................................................................G--------------------------------AG------------CAGCAGCAGGAGCAGCA---GC................................................................................................................................................................................................................................................................................................................................................................................................................................22130.081000001
........................................................................................................................................................................................................GAGCAGCAG----------------------------------------------------------------------------------CAGGAGCAGCA---------------GC..................................................................................................................................................................................................................................................22130.081000001
.............................................................................................................................................................................................................................................................................................................................................GAG----------------------------------------CA------------G-----------------CAGCAGGAGCAGCAGC.........................................................................................................................................22130.081000001
droWil2
TAATAATAAATTAATGCC-AGCAACAA---------C-------------------------------AGCAGCAGC--------------------------------AG------------CAACATCAACATCAACA---TCAACAGTATTCACAGCCGGCAGC---------AGAAGCA-------GCAGCAGCAGCAG-------------------------------------------------------------------------------------------------CAGCAGCAGAAATAGCAATAGCAACAGCGACAGCAG------------------------------------TGGCATCTATCAACACC-----------------ATCAGCAAGA---------------------------------GCAACATG----TTCCAAATA--------TGCTAATTAATAGTCAAATATATAAATTATTAACAAATGGCAATAGCAGCAGCAG------CAGTAGCAGTCAATTGCC-TAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................TCAACAGTATTCACAGCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................................................................................................................................................................................................................................................................................................................AGAAATAGCAATAGCAACAGCGACAGC...................................................................................................................................................................................................................................2711.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................C-----------------ATCAGCAAGA---------------------------------GCAACATG----....................................................................................................1911.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAGCAGCAGCAG------CAGT..................1950.20101000
.................C-AGCAACAA---------C-------------------------------AGCAGCAGC--------------------------------AG------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
.........................................................................CAGC--------------------------------AG------------CAACATCAACATCA........................................................................................................................................................................................................................................................................................................................................................................................................................................20190.05100010
....................GCAACAA---------C-------------------------------AGCAGCAGC--------------------------------AG------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
droVir3
CAGCAGCAGCAACAAGAGCAGCAGCAG---------CA----------------GCAAC---AACA----------AGAGC---AGC----------------AG---CAG------------CAGCAACAAGAGCGGCA---GCAGCAACAATGACA-------GC---AGCAGCAAAAGCA-------ACAGCAA-----------------------------------------------------TAGCAATGG-----------------------------------------CGG---CAAGAGCAGCAGCAGCAGCAGCAATAGCAG----------------------------------------CA---AGAGCAGCAGCAG-----------------CAGTGGCAGTAGCAG---CGGTAG------------CAGT----AG---CAGCGGTAG---------CAG------------------------TAG----------C------AGTAGCAA------CAGCAACAGCTCAACCAA-TAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................CAATAGCAG----------------------------------------CA---AGAGCAGCAGCA........................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTAG------------CAGT----AG---CAGCGGTAG---------CA.................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GCAGCAGCAATAGCAG----------------------------------------CA---AGA.................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
......................................................GCAAC---AACA----------AGAGC---AGC----------------AG---CAG------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.002000000000000000000000000000002000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CGGTAG------------CAGT----AG---CA...................................................................................................1821.002000000000000000000002000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGCGGTAG---------CAG------------------------TAG----------C------A...................................1821.002000000000000000000002000000000000000000000000000000000000000000
.....................................A----------------GCAAC---AACA----------AGAGC---AGC----------------AG---CAG------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000000001000000000000000000000000000000000
.....................................A----------------GCAAC---AACA----------AGAGC---AGC----------------AG---C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCAG---CGGTAG------------CAGT----AG---C....................................................................................................2020.501000000000000000000000000000000000000000000000000000000000000010
.....................................A----------------GCAAC---AACA----------AGAGC---AGC----------------AG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----AG---CAGCGGTAG---------CAG------------------------TAG----------C------....................................2020.501000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CAG------------------------TAG----------C------AGTAGCAA------CAGC..................2120.501000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................AGCAACAATGACA-------GC---AGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................GCAGCAACAATGACA-------GC---AGC....................................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000000000100000000000000000000000000000000000000000000
.....GCAGCAACAAGAGCAGCAGCAG---------CA----------------GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000000000000000000000000000000010
..........................G---------CA----------------GCAAC---AACA----------AGAGC---AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................A-------GC---AGCAGCAAAAGCA-------ACAGCA.............................................................................................................................................................................................................................................................................................................................................................................2250.201000000000000000000000000000010000000000000000000000000000000000
.........................................................AC---AACA----------AGAGC---AGC----------------AG---CAG------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.171000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAATAGCAG----------------------------------------.........................................................................................................................................................................................2560.171001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ACA-------GC---AGCAGCAAAAGCA-------ACA................................................................................................................................................................................................................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
.......AGCAACAAGAGCAGCAGCAG---------CA----------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.171000000000000000000000000000000000000100000000000000000000000000
.........................................................AC---AACA----------AGAGC---AGC----------------AG---CAG------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.152000000000000000000000000000020000000000000000000000000000000000
..............AGAGCAGCAGCAG---------CA----------------GCAAC---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
............................................................................AGAGC---AGC----------------AG---CAG------------CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000002000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GG---CAAGAGCAGCAGCAGC...............................................................................................................................................................................................................................................1870.141000000000000000000000000000001000000000000000000000000000000000
........GCAACAAGAGCAGCAGCAG---------CA----------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAATAGCA..................................................................................................................................................................................................................................2570.141001000000000000000000000000000000000000000000000000000000000000
........GCAACAAGAGCAGCAGCAG---------CA----------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000001000000000000000000000000000000000
........................CAG---------CA----------------GCAAC---AACA----------AGAGC---A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000000000100000000000000000000000000000000000000000000000000000
...............GAGCAGCAGCAG---------CA----------------GCAAC---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
...........ACAAGAGCAGCAGCAG---------CA----------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
...............................................................ACA----------AGAGC---AGC----------------AG---CAG------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
.................................................................A----------AGAGC---AGC----------------AG---CAG------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000002000000000000000000000000000000000000000000000000000000000
.............................................................................GAGC---AGC----------------AG---CAG------------CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102001000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCAGTAGCAG---C...................................................................................................................................15100.101000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAATAGC...................................................................................................................................................................................................................................22140.071001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG-----------------CAGTGGCAGT............................................................................................................................................19150.071000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AGCAG----------------------------------------CA---AGAGCAGCAGC.........................................................................................................................................................................18150.071000000010000000000000000000000000000000000000000000000000000000
..........................................................C---AACA----------AGAGC---AGC----------------AG---CAG------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
.........CAACAAGAGCAGCAGCAG---------CA----------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.061000000000000010000000000000000000000000000000000000000000000000
.........................................................AC---AACA----------AGAGC---AGC----------------AG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................CAAGAGCAGCAGCAGCAGCA...........................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AGAGCAGCAGCAGCAGCAGC.........................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.........CAACAAGAGCAGCAGCAG---------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................CAAC---AACA----------AGAGC---AGC----------------AG---C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
...............................................................................GC---AGC----------------AG---CAG------------CAGCAACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................A----------AGAGC---AGC----------------AG---CAG------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................CA-------GC---AGCAGCAAAAGCA-------ACA................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
............CAAGAGCAGCAGCAG---------CA----------------GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
............................................................................AGAGC---AGC----------------AG---CAG------------CAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.......................GCAG---------CA----------------GCAAC---AACA----------AGAGC---T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
..............AGAGCAGCAGCAG---------CA----------------GCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
................................................................CA----------AGAGC---AGC----------------AG---CAG------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................A-------GC---AGCAGCAAAAGCA-------AC.................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000100000000000000000000000
..........................................................C---AACA----------AGAGC---AGC----------------AG---CAG------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
GCAGCAGCAACAGCAGC--AGCAGCAG--CAG----C---AGC--AACA---------------------------GCAGC---AGC----------------AG---CAA------------CAGCAGCAGCAGC---AGCAGCAGC---AACAGCA-------GCAGCAGCAGCAGCAGCA-------GCAGC----------------------------AGC-------------------------AGC---AG-----------------------------------------CAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAG----------------------------------------CA---GCAACAACAG--------------------CAGCAACAGCAGCAGCAACAGCAGCAACAGC-------------AG---CAACAGCAG---------CAA------------------------CAG-------------------CAACAG------CAACAACAGCAGTAGCAG-CAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGC-------------..........................................................................................................19200.204400000
....................................................................................................................................CAGC---AGCAGCAGC---AACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................19200.204020020
.................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAG----------------------------------------CA---GCAAC...............................................................................................................................................................................22200.153000030
........................................................................................................................................................................GCAGCAGCAGCAGCA-------GCAGC----------------------------AGC-------------------------A.....................................................................................................................................................................................................................................................................................................................24200.153300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGC-------------AG---C....................................................................................................22200.102020000
.........................................................................................................................................................................................................................................................................................................................................ACAGCAG----------------------------------------CA---GCAACAACAG--------------------C.....................................................................................................................................................20200.102000020
....................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------CAGCAACAGCAGCAGC......................................................................................................................................19200.102200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAGC-------------AG---.....................................................................................................20200.102200000
....................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------CAGCAACAGCAGCAGCAAC...................................................................................................................................22200.051000001
................................................................................................................................................................................................................................................................................................................................................................................................ACAACAG--------------------CAGCAACAGCA...........................................................................................................................................18200.051100000
.............................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCAG----------------------------------------CA---GCAACAAC............................................................................................................................................................................29200.051000010
.......CAACAGCAGC--AGCAGCAG--CAG----C---AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..................................................................................................................................................GC---AACAGCA-------GCAGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.........................................................................................................................................................................................................................................................................................................................................ACAGCAG----------------------------------------CA---GCAACAACA...........................................................................................................................................................................18200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACAGCAGC.............................................................................................................................22200.051100000
...................................................................................................................................................C---AACAGCA-------GCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
........................................................................................................................................................................................................................................................................................................................................AACAGCAG----------------------------------------CA---GCAACAACAG--------------------CAGCA.................................................................................................................................................25200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAACAGC-------------AG---.....................................................................................................25200.051100000
...............................................................................................................................................GCAGC---AACAGCA-------GCAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG---------CAA------------------------CAG-------------------CAACAG------CA....................22200.051100000
........................................................................................................G---CAA------------CAGCAGCAGCAGC---AGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.......................GCAG--CAG----C---AGC--AACA---------------------------GCAGC---AGC----------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.....................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG----------------------------------------CA---GCAACAACAG--------------------CAGC..................................................................................................................................................27200.051000010
................................................................................................................................GCAGCAGC---AGCAGCAGC---AACAGCA-------GCA.........................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
....................................................................................AGC----------------AG---CAA------------CAGCAGCAGCAGC---A.....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................ACAG--------------------CAGCAACAGCAGCAGCAAC...................................................................................................................................23200.051100000
............................................................................................................................................................................................................................................................GC---AG-----------------------------------------CAACAGCAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................26200.051000010
...............................................................................................................................AGCAGCAGC---AGCAGCAGC---AACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
.............................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCAG----------------------------------------CA---GCA.................................................................................................................................................................................24200.051010000
............................................................................................................................................................................................................................................................................................................................................GCAG----------------------------------------CA---GCAACAACAG--------------------CAGCAACAGC............................................................................................................................................26200.051100000
..........................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAACAGCAG----------------------------------------CA---GCAAC...............................................................................................................................................................................29200.051000010
..................................................................................................................................................................................................C----------------------------AGC-------------------------AGC---AG-----------------------------------------CAACAGCAGCAGCAGCA....................................................................................................................................................................................................................................................26200.051100000
......GCAACAGCAGC--AGCAGCAG--CAG----C---A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..............AGC--AGCAGCAG--CAG----C---AGC--AACA---------------------------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
...................................................................................................................................................................................AGCA-------GCAGC----------------------------AGC-------------------------AGC---AG-----------------------------------------CAACAG...............................................................................................................................................................................................................................................................23200.051100000
...................................................................................................................................................................................AGCA-------GCAGC----------------------------AGC-------------------------AGC---AG-----------------------------------------CAACAGC..............................................................................................................................................................................................................................................................24200.051100000
...............GC--AGCAGCAG--CAG----C---AGC--AACA---------------------------GCAGC---A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAG----------------------------------------CA---....................................................................................................................................................................................18200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC-------------AG---CAACAGCAG---------CAA------------------------CAG-------------------CAAC..............................26200.051100000
....................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAG----------------------------------------CA---GCAACAACAG--------------------......................................................................................................................................................24200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC-------------AG---CAACAGCAG---------CA.................................................................................19200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG--------------------CAGCAACAGCA...........................................................................................................................................20200.051000010
............................................................................................................CAA------------CAGCAGCAGCAGC---AGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................AACAACAG--------------------CAGCAACAGCAGCAGC......................................................................................................................................24200.051100000
...................................................................................................................................................C---AACAGCA-------GCAGCAGCAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droGri2
GCAGCAGCAGCAGCAGC--AGCAGCAG---------C--------AGCGGC--AGCAG-------------------CAGC---AG----------------------CAG------------CAGCAGCAGCAGCGGCA---GCAGCAGCAGCGGCA-------GC---AGCAGCAGCAGC-------------AGCAGCAG-----------------------------------------------CAGCAGCAG-----------------------------------------CGG---CAGCAGCAGCAGCGGCAGCGGCAGCGGCAG----------------------------------------CA---GCAGCAGCAGCAG-----------------CAGCAGCAGCAGCGG---CAGCAG------------CAGC----AG---CAGCAGGAG---------CGG------------------------CAG----------C---AGCAGCAGCAG------CAGCAGC---------AG-CAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................CAG-----------------------------------------CGG---CAGCAGCAGCAGCGGC...............................................................................................................................................................................................................................................22200.05101

Generated: 05/18/2015 at 05:58 AM