ID:

dan_2916

 Coordinate:

scaffold_13340:6055564-6055636 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.6 -5.4 -5.0

Flybase annnotation

exon [dana_GLEANR_19096:3]; exon [dana_GLEANR_19096:2]; CDS [Dana\GF17834-cds]; CDS [Dana\GF17834-cds]; intron [Dana\GF17834-in]; Antisense to intron [Dana\GF17160-in]

No Repeatable elements found

mature
  1. dan_2915  scaffold_13340:6039122-6039142 +
  2. dan_2916  scaffold_13340:6055573-6055593 +
star
  1. dan_2915  scaffold_13340:6039161-6039180 +
  2. dan_2916  scaffold_13340:6055612-6055631 +

Sense Strand Reads

##################################################-------------------------------------------------------------------------##################################################
CAGTGTGGAGGCTGTTTCCAGGGATTCGGATCACCCTATATGTACAACCCGTATGGATTTAATCCGTTTGTGCCTTTCCCTTCCTACGGAGGTCCCGAATAATATCCCGAATAATGATTTAAGCAATACAGGAAACGACATAGATGACAAGAACGTGGCAGGATCAGGAGACT
***********************************************************......(((((.(((..(((........))))))..)))))..................******************************************************* 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 M044
female body
 M058
embryo
 V039
embryo
 V106
head
 V055
head
..............................................................................................................................................GATGACAAGAACGTGGCAGGAT......... 22 0 2 5.00 10 5 3 2 0 0 0
......................................................................................................................................................GAACGTGGCAGGATCAGGA.... 19 0 2 3.50 7 2 5 0 0 0 0
........................................................................................................................................GACATAGATGACAAGAACGTGGCA............. 24 0 2 3.00 6 4 1 1 0 0 0
..............................................................................................................................................GATGACAAGAACGTGGCAGG........... 20 0 2 3.00 6 4 0 2 0 0 0
..............................................................................................................................................GATGACAAGAACGTGGCAGGATC........ 23 0 2 2.50 5 2 1 2 0 0 0
......................................................................................................................................................GAACGTGGCAGGATCAGGAGA.. 21 0 2 2.50 5 3 2 0 0 0 0
.............................................................................................................................................AGATGACAAGAACGTGGCA............. 19 0 2 2.50 5 2 3 0 0 0 0
........................................................................................................................................GACATAGATGACAAGAACGT................. 20 0 2 2.00 4 4 0 0 0 0 0
...........................................................................................................................................ATAGATGACAAGAACGTGGCA............. 21 0 2 2.00 4 2 1 0 1 0 0
...........................................................................................................................................ATAGATGACAAGAACGTGGCAGG........... 23 0 2 2.00 4 2 2 0 0 0 0
.........GGCTGTTTCCAGGGATTCGG................................................................................................................................................ 20 0 2 1.50 3 0 3 0 0 0 0
.....................................................................................................................................AACGACATAGATGACAAGAAC................... 21 0 2 1.50 3 1 0 2 0 0 0
.................................................................................................................................................GACAAGAACGTGGCAGGATC........ 20 0 2 1.50 3 0 1 2 0 0 0
.......GAGGCTGTTTCCAGGGATTCGG................................................................................................................................................ 22 0 2 1.50 3 1 1 1 0 0 0
...........................................................................................................................................ATAGATGACAAGAACGTGGCAGGATC........ 26 0 2 1.50 3 2 1 0 0 0 0
...................................................................................................................................................CAAGAACGTGGCAGGATCA....... 19 0 2 1.50 3 2 1 0 0 0 0
..............................................................................................................................................GATGACAAGAACGTGGCA............. 18 0 2 1.50 3 0 1 0 1 0 1
..........................................................................................................................................CATAGATGACAAGAACGTGGCAGGATC........ 27 0 2 1.00 2 1 1 0 0 0 0
..................................................................................................................................................ACAAGAACGTGGCAGGATCAGGAGA.. 25 0 2 1.00 2 0 2 0 0 0 0
......................................................................................................................................ACGACATAGATGACAAGAACGTGGCA............. 26 0 2 1.00 2 2 0 0 0 0 0
..........................................................................................................................................CATAGATGACAAGAACGTGGCAGG........... 24 0 2 1.00 2 2 0 0 0 0 0
..............................................................................................................................................GATGACAAGAACGTGGCAGGATCAGGA.... 27 0 2 1.00 2 2 0 0 0 0 0
...........................................................................................................................................ATAGATGACAAGAACGTGGCAG............ 22 0 2 1.00 2 0 1 1 0 0 0
........................................................................................................................................GACATAGATGACAAGAACGTGGCAGG........... 26 0 2 1.00 2 2 0 0 0 0 0
...................................................................................................................GATTTAAGCAATACAGGAAACGAC.................................. 24 0 2 1.00 2 0 1 1 0 0 0
................................................................................................................................................TGACAAGAACGTGGCAGGA.......... 19 0 2 1.00 2 1 0 1 0 0 0
.......................................................................................................................................CGACATAGATGACAAGAACGTGGCAG............ 26 0 2 1.00 2 1 1 0 0 0 0
..........................................................................................................................................CATAGATGACAAGAACGTGGCAGGAT......... 26 0 2 1.00 2 1 1 0 0 0 0
..........................................................................................................................GCAATACAGGAAACGACATA............................... 20 0 2 1.00 2 0 0 1 1 0 0
.................................................................................................................................................GACAAGAACGTGGCAGGATCAGG..... 23 0 2 1.00 2 1 0 1 0 0 0
.......................................................................................................................................CGACATAGATGACAAGAACGT................. 21 0 2 1.00 2 1 1 0 0 0 0
...........................................................................................................................................ATAGATGACAAGAACGTGGCAGGAT......... 25 0 2 1.00 2 1 1 0 0 0 0
.....................................................................................................................................AACGACATAGATGACAAGAACGTGGCA............. 27 0 2 1.00 2 1 1 0 0 0 0
.................................................................................................................................................GACAAGAACGTGGCAGGATCAGGA.... 24 0 2 1.00 2 1 1 0 0 0 0
...........................................................TAATCCGTTTGTGCCTTTCCC............................................................................................. 21 0 2 1.00 2 0 1 1 0 0 0
.............................................................................................................................................AGATGACAAGAACGTGGCAGG........... 21 0 2 1.00 2 1 1 0 0 0 0
............................GATCACCCTATATGTACAACCCGT......................................................................................................................... 24 0 2 1.00 2 1 0 1 0 0 0
........................................................................................................................................GACATAGATGACAAGAACGTGGCAGGAT......... 28 0 2 1.00 2 2 0 0 0 0 0
.......................................................................................................................................CGACATAGATGACAAGAACGTGGCA............. 25 0 2 1.00 2 2 0 0 0 0 0
......................................................................................................................................................GAACGTGGCAGGATCAGG..... 18 0 2 1.00 2 1 1 0 0 0 0
....................................................................................................................................AAACGACATAGATGACAAGAAC................... 22 0 2 1.00 2 0 0 1 1 0 0
...................................................................................................................GATTTAAGCAATACAGGAAACGA................................... 23 0 2 1.00 2 0 0 2 0 0 0
........................................................................................................................................GACATAGATGACAAGAACGTGGC.............. 23 0 2 1.00 2 1 0 1 0 0 0
.........GGCTGTTTCCAGGGATTCGGAT.............................................................................................................................................. 22 0 2 1.00 2 1 1 0 0 0 0
..................................................................................................ATAATATCCCGAATAATGAT....................................................... 20 0 2 1.00 2 0 0 0 2 0 0
.............GTTTCCAGGGATTCGGATC............................................................................................................................................. 19 0 2 1.00 2 0 2 0 0 0 0
..........................................................................................................................GCAATACAGGAAACGACATAGAT............................ 23 0 2 1.00 2 0 0 0 0 2 0
......................................................................................................................TTAAGCAATACAGGAAACGACATA............................... 24 0 2 1.00 2 1 0 1 0 0 0
.................................................................................................................................................GACAAGAACGTGGCAGGA.......... 18 0 2 1.00 2 0 0 1 1 0 0
.....................................................................................................................................AACGACATAGATGACAAGAACGT................. 23 0 2 1.00 2 2 0 0 0 0 0
............................................................................................................................AATACAGGAAACGACATAGAT............................ 21 0 2 1.00 2 1 0 0 0 1 0
..........GCTGTTTCCAGGGATTCGGATCACCCC........................................................................................................................................ 27 1 2 0.50 1 0 0 1 0 0 0
...........................................................................................................................................ATAGATGACAAGAACGTGGC.............. 20 0 2 0.50 1 0 0 1 0 0 0
.........................................................................CTTTCCCTTCCTACGGAGGTCCCGA........................................................................... 25 0 2 0.50 1 0 1 0 0 0 0
.............................................................................................................................................AGATGACAAGAACGTGGCAGGATC........ 24 0 2 0.50 1 0 1 0 0 0 0
CAGTGTGGAGGCTGTTTCCAGGGATT................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
.............................ATCACCCTATATGTACAACCCGTATG...................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
...............TGCTAGGGATTCGGATCACCCT........................................................................................................................................ 22 2 2 0.50 1 0 0 1 0 0 0
.......GAGGCTGTCTCCAGGGATTC.................................................................................................................................................. 20 1 2 0.50 1 0 1 0 0 0 0
.............GTTTCCAGGGATTCGGATCACCCT........................................................................................................................................ 24 0 2 0.50 1 0 1 0 0 0 0
................................................................CGTTTGTGCCTTTCCCTTCCTACGGA................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0
.........................................................................................................................................ACATAGATGACAAGAACGTGGCAGGATC........ 28 0 2 0.50 1 1 0 0 0 0 0
................................................................................TTCCTACGGAGGTCCCGAAT......................................................................... 20 0 2 0.50 1 0 0 0 0 1 0
.................................................................................................AATAATATCCCGAATAATGATTTAAGC................................................. 27 0 2 0.50 1 0 0 1 0 0 0
........................................................ATTTAATCCGTTTGTACCTT................................................................................................. 20 1 2 0.50 1 0 0 0 1 0 0
..........................................................................................................................................CATAGATGACAAGAACGTGGC.............. 21 0 2 0.50 1 0 0 1 0 0 0
.............GTTTCCAGGGATTCGGAT.............................................................................................................................................. 18 0 2 0.50 1 0 0 0 1 0 0
........................................................................................................................AAGGAATACAGGAAACGACATAGAT............................ 25 1 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................GAACGTGGCAGGATCAGGAGAC. 22 0 2 0.50 1 0 1 0 0 0 0
.....................................................................................................................................................AGAACGTGGCAGGATCAGGAGAC. 23 0 2 0.50 1 0 0 0 0 1 0
.............................................................................................................................................AGATGACAAGAACGTGGCAG............ 20 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................AATACAGGAAACGACATA............................... 18 0 2 0.50 1 0 0 0 1 0 0
.........GGCTGTTTCCAGGGATTCGGAC.............................................................................................................................................. 22 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................................................................GACTAGAACGTGGCAGGATCAGGA.... 24 1 2 0.50 1 0 0 1 0 0 0
...........................................................TAATCCGTTTGTGCCTTTCC.............................................................................................. 20 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................................ATGACAAGAACGTGGCAGGAT......... 21 0 2 0.50 1 0 0 1 0 0 0
.......................................................................................................ATCCAGAATAATGATTTAAGC................................................. 21 1 2 0.50 1 0 0 1 0 0 0
..........GCTGTTTCCAGGGATTCGG................................................................................................................................................ 19 0 2 0.50 1 0 0 1 0 0 0
...............................CACCCTATATGTACAACCCGT......................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
.................CCAGGGATTCGGATCACCC......................................................................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0
.....................................................TGGATTTAATCCGTTTGTGCC................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0
........................................................................................................................................GACATAGATGGCAAGAACGTGGCA............. 24 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................AGAACGTGGCAGGATCAGGA.... 20 0 2 0.50 1 0 1 0 0 0 0
................................................................................................................................................TGACAAGAACGTGGCAGGATC........ 21 0 2 0.50 1 0 0 1 0 0 0
....................................................................................................................................................AAGAACGTGGCAGGATCAGGAG... 22 0 2 0.50 1 0 1 0 0 0 0
........................................................................................................................................GACGTAGATGACAAGAACGTG................ 21 1 2 0.50 1 1 0 0 0 0 0
.............................................................................................CCCGAATAATATCCCGAATAAT.......................................................... 22 0 2 0.50 1 0 0 1 0 0 0
...................................................................................................................GATTTAAGCAATACAGGAAACG.................................... 22 0 2 0.50 1 0 0 0 1 0 0
.............................................................................................CCCGAATAATATCCCGAATAATGAT....................................................... 25 0 2 0.50 1 0 0 1 0 0 0
....................................................................................................................................TTACGACATAGATGACAAGAACGT................. 24 2 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................GACATAGATGACAAGAACGTGGCAGGA.......... 27 0 2 0.50 1 0 1 0 0 0 0
........AGGATGTTTCCAGGGATTCGGATAACC.......................................................................................................................................... 27 2 2 0.50 1 1 0 0 0 0 0
.............GTTTCCAGGGATTCGGAC.............................................................................................................................................. 18 1 2 0.50 1 0 0 1 0 0 0
.......GAGGCTGTTTCCAGGGATTCGGAT.............................................................................................................................................. 24 0 2 0.50 1 0 1 0 0 0 0
....................................................ATGGATTTAATCCGTTTGTGCCTTTCCC............................................................................................. 28 0 2 0.50 1 0 0 1 0 0 0
.........................................................................CTTTCCCTTCTTACGGAGGTCCC............................................................................. 23 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................................................................GACAAGAACGTGGCAGGAT......... 19 0 2 0.50 1 0 1 0 0 0 0
.....................................................................................................................................AAAGACATAGATGACAAGAACGTGGC.............. 26 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................................................................GATGACAAGAACGTGGCAGGA.......... 21 0 2 0.50 1 1 0 0 0 0 0
.................CCAGGGATTCGGATCACCCTATATGTAC................................................................................................................................ 28 0 2 0.50 1 0 1 0 0 0 0
.......................................................GGTTTAATCCGTTTGTGCCTTTCCCTT........................................................................................... 27 1 2 0.50 1 0 0 1 0 0 0
................................................................................................GAATAATATCCCGAATAATGATTTAAGC................................................. 28 0 2 0.50 1 0 0 1 0 0 0
....................................................................................................................................AAACGACATAGATGACAAGAACGTGGC.............. 27 0 2 0.50 1 1 0 0 0 0 0
..................................................GTATGGATTTAATCCGTTTGTGCCT.................................................................................................. 25 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................................ATGACAAGAACGTGGCAGG........... 19 0 2 0.50 1 1 0 0 0 0 0
...............TTATAGGGATTCGGATCACCCT........................................................................................................................................ 22 2 2 0.50 1 0 0 1 0 0 0
............................................................................................................................AATACAGGAAACGACATAGA............................. 20 0 2 0.50 1 0 0 0 1 0 0
....................................................AGGGATTTAATCCGTTTGTGC.................................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0
....................................................................................................AATATCCAGAATAATGATTTAAGC................................................. 24 1 2 0.50 1 0 0 1 0 0 0
.........................................GTACAACCCGTATGGATTT................................................................................................................. 19 0 2 0.50 1 0 0 0 1 0 0
...................................CTATATGTACAACCCGTATGGATT.................................................................................................................. 24 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................ACAAGAACGTGGCAGGATCAGGAG... 24 0 2 0.50 1 0 1 0 0 0 0
........................................................................................................................................GCCATAGATGACAAGAACGTGGC.............. 23 1 2 0.50 1 1 0 0 0 0 0
.......................................................................GCCTTTCCATTCCTACGGAG.................................................................................. 20 1 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................................GATGACCAGAACGTGGCAGGATC........ 23 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................................GATTTAAGCAATACAGGAAACGACAT................................ 26 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................TAGATGACAAGAACGTGGC.............. 19 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................GTGGCAGGATCAGGAGACT 19 0 2 0.50 1 0 1 0 0 0 0
.................................................................................................................................AGGAAACGACATAGATGACAAGAAC................... 25 0 2 0.50 1 0 0 1 0 0 0
.............................................AACCCGTATGGATTTAATCC............................................................................................................ 20 0 2 0.50 1 0 0 0 1 0 0
...............................................................................................................................................ATGAAAAGAACGTGTCAGGATC........ 22 2 2 0.50 1 0 0 0 1 0 0
...........CTGTTTCCAGGGATTCGGAT.............................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0
.............GTTTCCAGGGATTCGGATCACT.......................................................................................................................................... 22 1 2 0.50 1 0 1 0 0 0 0
.......................................................GATTTAATCCGTTTGTGCCTT................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0
............................................................AATCCGTTTGTGCCTTTCCCTTCCTACGG.................................................................................... 29 0 2 0.50 1 0 1 0 0 0 0
...................................................................................................................GATTTAAGCAATACAGGAAACGACATA............................... 27 0 2 0.50 1 0 0 0 1 0 0
...............................................................................................................................ACAGGAAACGACATAGATGAC......................... 21 0 2 0.50 1 0 0 0 1 0 0
..............................................................................................................................................GATGACAAGAACGTGGCAGGATCAG...... 25 0 2 0.50 1 0 1 0 0 0 0
....................................................ATGGATTTAATCCGTTTGTGCCTT................................................................................................. 24 0 2 0.50 1 0 0 1 0 0 0
........................................................ATTTAATCCGTTTGTGCCTTTCCCTT........................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0
.......GAGGCTGTTTCCAGGGATTCGGATC............................................................................................................................................. 25 0 2 0.50 1 0 0 0 0 1 0
.....................................................................................................................TTTAAGCAATACAGGAAACGAC.................................. 22 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................CATAGATGACAAGAACGTGGCA............. 22 0 2 0.50 1 1 0 0 0 0 0
.................CCAGGGATTCGGATCACCCTAT...................................................................................................................................... 22 0 2 0.50 1 0 0 0 1 0 0
...............................................................................................................................................ATGACAAGGACGTGGCAGGATC........ 22 1 2 0.50 1 0 1 0 0 0 0
........................................................................................................................AAGCAATACAGGAAACGACATAGAT............................ 25 0 2 0.50 1 0 1 0 0 0 0
.........................................................................................................................................ACATAGATGACAAGAACGTGGC.............. 22 0 2 0.50 1 0 0 1 0 0 0
............................................................................................................................AATACAGGAAACGACATAGAC............................ 21 1 2 0.50 1 0 0 1 0 0 0
.......................................................GATTTAATCCGTTTGTGCC................................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0
....................................................................................................AATATCCAGAATAATGATTTAAGCA................................................ 25 1 2 0.50 1 0 0 1 0 0 0
....................................................ATGGATTTAATCCGTTTGTGCCT.................................................................................................. 23 0 2 0.50 1 0 0 1 0 0 0
.......................................................................GCCTTTCCCTTCCTACGGA................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................ACAAGAACGTGGCAGGATC........ 19 0 2 0.50 1 1 0 0 0 0 0
..........................................................TTAATCCGTTTGTGCCTTTCCCTTCT......................................................................................... 26 1 2 0.50 1 0 0 1 0 0 0
.................................................................................................................................................GAAAAGAACGTGGCAGGATC........ 20 1 2 0.50 1 0 0 1 0 0 0
.....................................ATGTGTACAACCCGTATGGATT.................................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0
...................................................................................................................................GAAACGACATAGATGACAAGAACGT................. 25 0 2 0.50 1 0 0 1 0 0 0
...................................................................................................................................................CAAGAACGGGGCAGGATCAGGA.... 22 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................................................AAACGACATAGATGACAAGAACGT................. 24 0 2 0.50 1 1 0 0 0 0 0
.......................................ATCTACAACCCGTATGGATTTAATC............................................................................................................. 25 1 2 0.50 1 0 0 1 0 0 0
..............................TCACCCTATATGTACAACCCGTATG...................................................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0
.....................................................................................................................................................AGAACGTGGAAGGATCAG...... 18 1 2 0.50 1 1 0 0 0 0 0
......................GATTCGGATCACCCTATATGTA................................................................................................................................. 22 0 2 0.50 1 0 0 1 0 0 0
...............TTCCAGGGATTCGGATCACCCT........................................................................................................................................ 22 0 2 0.50 1 0 0 0 0 1 0
........................................................ATTTAATCCGTTTGTGCCTTTCC.............................................................................................. 23 0 2 0.50 1 0 1 0 0 0 0
....................................................ATGGATTTAATCCGTTTGTGCC................................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0
...........................................................................TTCCCTTCCTACGGAGGTCCCGAAT......................................................................... 25 0 2 0.50 1 0 1 0 0 0 0
.......................ATTCGGATCACCCTATATGTACAACCCGT......................................................................................................................... 29 0 2 0.50 1 0 1 0 0 0 0
.......................ATTCGGATCACCCTATATGTACAACCCG.......................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0
..........................................................................TTTCCCTTCCTACGGAGGTCCCGA........................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................ATTTAAGCAATACAGGAAACGACATA............................... 26 0 2 0.50 1 0 0 0 1 0 0
....................................................................................................................................AAACGACATAGATGACAAGA..................... 20 0 2 0.50 1 0 0 0 0 0 1
............................GATCACCCTATATGTACAACCC........................................................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0
.......GAGGCTGTTTCCAGGGATTC.................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................GGCATAGATGACAAGAACGTGGCAGG........... 26 1 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................................................AACGTGGCAGGATCAGGAGAC. 21 0 2 0.50 1 0 0 1 0 0 0
..................................................................................................ATAATATCCCGAATAATGATTTAAGC................................................. 26 0 2 0.50 1 0 0 1 0 0 0
..........................................................................................................................................CATAGATGACCAGAACGTGGCAG............ 23 1 2 0.50 1 0 0 1 0 0 0
....................................................................................................................................................AAGAACGTGGCAGGATCAGGAGACT 25 0 2 0.50 1 0 1 0 0 0 0
CAGTGTGGAGGCTGTTTCCAGGGA..................................................................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0
..............................................................................................................ATAATGATTTAAGCAATACA........................................... 20 0 2 0.50 1 0 0 1 0 0 0
..........................................................................................................................................CATAGATGACAAGAACGTGGCAGGA.......... 25 0 2 0.50 1 0 0 1 0 0 0
...............................................................................CTTCTTACGGAGGTCCCGA........................................................................... 19 1 2 0.50 1 1 0 0 0 0 0
............................................................................................................................AATACAGGAAACGACATAGATGAC......................... 24 0 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................................CGACATAGATGACAAGAACGTGGC.............. 24 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................................AGATGACAAGAACGTGGCAGGAT......... 23 0 2 0.50 1 0 0 0 0 1 0
............................................................................................................................AATACAGGAAACGACATAGATGA.......................... 23 0 2 0.50 1 1 0 0 0 0 0
..GTGTGGAGGCTGTTTCCAG........................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................AAGAACGTGGCAGGATCAGGA.... 21 0 2 0.50 1 0 1 0 0 0 0
...................................................................................................................................................CAAGAACGTGGCAGGATCAGGA.... 22 0 2 0.50 1 0 1 0 0 0 0
......................................................................................................................................ACGACATAGATGACAAGAACGTG................ 23 0 2 0.50 1 0 0 0 0 1 0
..............................................................................................................................................GATGACAAGAACGTGGCAG............ 19 0 2 0.50 1 0 1 0 0 0 0
.......................................ATGTACAACCCGTATGGATTTAATCCGT.......................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................GACATAGATGACAAGAAC................... 18 0 2 0.50 1 0 0 1 0 0 0
............................................................AATCCGTTTGTGCCTTTCCCTT........................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0
............................................................................................................................AATACAGGAAACGACATAGATGACAA....................... 26 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................CGACATAGATGACAAGAACGTGGCAGG........... 27 0 2 0.50 1 0 1 0 0 0 0
.............................................................................................................................ATACAGGAAACGACATAGA............................. 19 0 2 0.50 1 1 0 0 0 0 0
CAGTGTGGAGGCTGTTTCCAGGG...................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................TTTAAGCAATACAGGAAACGACAT................................ 24 0 2 0.50 1 1 0 0 0 0 0
......................................................GGATTTAATCCGTTTGTGCCT.................................................................................................. 21 0 2 0.50 1 0 1 0 0 0 0
..........................................................................................................................................CATAGATGACAAGAACGT................. 18 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................................ATGACAAGAACGTGGCAGGATCAGG..... 25 0 2 0.50 1 0 1 0 0 0 0
....................................................................................TACGGAGGTCCCGAATAATATCCC................................................................. 24 0 2 0.50 1 0 0 1 0 0 0
.............GTTTCCAGGGATTCGGATCACCC......................................................................................................................................... 23 0 2 0.50 1 0 0 1 0 0 0
...........................................................................................................................CAATACAGGAAACGACATA............................... 19 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................GATGACAAGAACGTGGCAGGAC......... 22 1 2 0.50 1 0 0 1 0 0 0
.......GAGGCTGTATCCAGAGAT.................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1 0
.............................ATCACCCAATACGTCCAACC............................................................................................................................ 20 3 20 0.15 3 0 0 0 0 3 0

Anti-sense strand reads

GTCACACCTCCGACAAAGGTCCCTAAGCCTAGTGGGATATACATGTTGGGCATACCTAAATTAGGCAAACACGGAAAGGGAAGGATGCCTCCAGGGCTTATTATAGGGCTTATTACTAAATTCGTTATGTCCTTTGCTGTATCTACTGTTCTTGCACCGTCCTAGTCCTCTGA
*******************************************************......(((((.(((..(((........))))))..)))))..................*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 M058
embryo
 V105
male body		 V106
head
...................................................AGACCCAAATTAGGCAAAC....................................................................................................... 19 2 2 0.50 1 1 0 0 0
...........................................................................................CAGGGCCTATTATAGGGC................................................................ 18 1 4 0.25 1 0 1 0 0
......................................................................................CCCCCCAGGGCTTATTAT..................................................................... 18 2 6 0.17 1 1 0 0 0
................................................................................................CTTAATATAGGGCATATT........................................................... 18 2 10 0.10 1 0 1 0 0
......................................ATACATGATGGGCATACT..................................................................................................................... 18 2 13 0.08 1 0 0 1 0
...................................................................................................................CTAAATTCATTATATCCTTTA..................................... 21 3 18 0.06 1 1 0 0 0
.......CTCCGATAAAGGTCCCTGG................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:6055514-6055686 + dan_2916 CAGTGTGGAGGCTGTTTCCAGGGATTCGGATCACCC------TATATGTACAA---CCC---GTATGGATTTAATCCG---T---TTGTGC---------CTTTCCCTTCCTACGG---AGG--------TCCCGAATAATATCCCGAATAATG---ATTTAAGCAATACAGGAAA---------------------------------------------------------CGACATAGATGACAAGAACG-------------TGGCAGGATCAGGAGAC-----------T
droBip1 scf7180000396708:2777671-2777860 - CAGTGTGGAGGCTGTTTCCAGGGTTTCGGGTCACCC------TATATGTACAA---CCC---GTATGGATTCAACCCG---T---TTATGC---------CTTTCCCTTCTTATGG---AGGCTACCCCCCGA---ACAATAACCCGAATAATG---ACTTAAGCAATACAGGAAAT---------------------------------ACTATTGGAAA------------CGAGATTGGTGACAAGAATG-------------TGGAAGGATCGGGAGAC-----------T
droKik1 scf7180000302706:1104022-1104205 - CAGTGTGCAGGCTGCTTCCAGGGATTCGGAGCTCCGATGATGCCAATCTACAG---TCTCCCCTACATGTACTCTCCC---T---ATATGCCAG------CATTCCCAGGCTATGGTGGCAACTTCCCAGGCA---------------------------ACGGCAACAGCA------------------TTGGAAACCAGAA------------TGGA---------------------AAGGACAACGAAG-------------TCACAGGATCAGGGGACGATGGC-----T
droFic1 scf7180000454104:393809-394025 - CAGTGTGCAGGTTGCTTTCAAGGGTTCGGGGCTCCCATGATGCCCATGTACAA---TGCTCCCTTTATTTATAATCCC---T---ATATGC---------CATATCCACCCTTTGG---CAACTTTCCAGGAA---A------------CTATAACA---ACGGAAATT---------------------CCGGAAATAACAATGCAATTAATAGTGAAAAGAATAATGGCAACAGCAATGCAGGGGATATAG-------------TATCAGGATCAGGAGACGGTGAA-----T
droEle1 scf7180000486474:1012444-1012663 - CAGTGTGCAGGTTGTTTCCAGGGATTTGGAGCGCCCCTTATGCCTATGTACAA---TGCTCCCTACATGTACAGTCCA---T---ATGTGC---------CATATCCATCCTTCGG---CAACTTCCCTGTCA---A------------TAATAATC---ATGGAAATAATA------------------ACGGAAATAATAATGCAAATAAAAATGGAAATAACAAAAGACATGAGAATGAAGACGACATCC-------------TTGCTGGCTCGGGAAATGGTGGC-----T
droRho1 scf7180000779540:36840-37056 + CAGTGTGCAGGTTGTTTCCAGGGATTCGGAGCGCCTA---TGCCTATGTACAA---TGCTCCTTATATGTACAATCCG---T---ATATGC---------CATATCCACCATATGG---CAACTTCCCATTAA---A------------TAATAACA---ACGGAAATAATA------------------ATGGAAATTATCATGGAAATAGCAACGGAAATAATATTGGAAATAATAATGAAGACAATATCC-------------TCGCAGGATCAGGAGATGATGGG-----T
droBia1 scf7180000302402:3944038-3944257 + GAATGTGCAGGTTGCTTCCAGGGATTCGGAGCTCCCATGATGCCCATCTATAA---TTCTCCCTACATGTACAACCCA---T---TCATGC---------CCTATCCTCCGTTTGG---CAACTACCCTGGCTT---------------CAATAACA---ACGGAAATAGCA------------------ATGGAAACATCTTTGGAGGTGACAATGCAAAGAAAGATGACAATAACAAGGTTGATAGCATCA-------------TAGCGGGATCTGGAGACGATGGT-----T
droTak1 scf7180000415310:981242-981437 - CAGTGTGCCGGTTGTTTCCAGGGCTTTGGAGCGCCCATGATGCCCATGTACAG---CTCTCCCTACATGTACAACCCA---T---TTATGG---------GATATCCACAGTTTGG---CAACTATCCACAAAT---------------GAATAATA---ATGGAAATAATA------------------ACGGAAATAACAATGCAAA------------------------TACTAATGTAGATAGCAACA-------------TCGCAGGCTTAGGCGACGATGGT-----T
droEug1 scf7180000409794:29008-29224 - CAATGTGCAGGTTGTTTCCAGGGCTACGGAGCGCCTATGATGCCCATGTTCAA---TGCTCCTTACATGTACAATCCT---T---ATATGC---------CATATCCAAGCTTTGG---AAATTATCCAGGCCTAAA------------TAATAATA---ATGGTAACAATG------------------ACGGAAGTAGCTATGGAAATAATAATGGTAAAGTT------GATAATATTGTGGATAACACCA-------------TCGCGGGATCTGGGGATGATGGT-----T
dm3 chr3R:10966887-10967075 + CAGTGTGCCGGTTGTTTCCAGGGATACGGAGCTCCC------CTCATGTATAA---TCCTCCTTGGATGTACAATCCA---TATTATGTGG---------CATATCCAGCCTTTAA---CAATATACCGGCCATA---------CAGAACAATA---ATAATGGCAACAGCGGTGAC---------------------------------------------------------ACCAGTGTAGATAAAACCA-------------TTGCAGATGATGATGACGATGGATGGACT
droSim2 3r:10257161-10257349 - CACTGTGCCGGTTGCTTCCAGGGATACGGAGCTCCC------CTCATGTATAA---TCCTCCTTGGATGTACAATCCA---TATTATGTGG---------CATATCCGCCCTTTAA---CAATGTACCGACCATA---------CAGAACAATA---ACAATGGCAACAGAGATGAC---------------------------------------------------------ACCAGTGTAGATAAAGCCA-------------TTGCAGATGAAGAGGCCGATGGATGGCAT
droSec2 scaffold_0:10979630-10979818 - CAGTGTGCCGGTTGCTTCCAGAGATACGGAGCTCCC------CTCATGTATAA---TCCTCCTTGGATGTACAATCCA---TATTATGTGG---------CATATCCACCCTTTAA---CAATGTACCGGCCATA---------CAGAACAATA---ATAATGGCAACAGAGATGAC---------------------------------------------------------ACCAGTGTAGATAAAGCCA-------------TTGCAGATGAAGAGGCCGATGGATGGCAT
droYak3 3R:15463197-15463388 - CAGTGTGCAGGCTGCTTCCAGGGATACGGAGCTCCA------CTCATGTATAA---TCCGCCTTGGATGTACAATCCC---T---ATGTGG---------CATATCCACCCTTTAA---CAATTTTCCGGCCATG---------AACAACAATA---ACTATGGAAACAAGGACGAA---------------------------------------------------------ACCAATGTGGACACC----AATGAAGAGACCCACGCAGGTTCAGGTGATG---GATGGATT
droEre2 scaffold_4770:10493083-10493260 + CAATGTGCAGCCTGCTTCCAGGGATACGGATCTCCA------CCCATGTACTCCAGTCCTATTTTGATGTACAATCCC---T---ACGTGG---------CGTATCCAATCATTAA---CAATTTCCCGCCCACA---------AACGACAACA---ACTATGCAGACAACGACGAC---------------------------------------------------------ACCGATGTAGACAAGACCA-------------ACGCAGGTTCAGATGACG-----------
dp5 2:20947746-20947932 + CAGTGCGCGGGCTGCTTCCTGGGCTATTCGGCTCCCTTCCAGCCCCAGTACTA---CGCTCCATATGTG---------------------CCATACAATCCATACCCACAATTTGC------------ACCCCTC---------CCCAACTGTG---GCCCTGGTGGCTGCAGCAACAACATCATCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----AGCGACGATATCCCTT---------CCCGCGATGAC-----T
droPer2 scaffold_3:3697745-3697931 + CAGTGCGCGGGCTGCTTCCTGGGCTATTCGGCTCCCTTCCAGCCCCAGTACTA---CGCTCCATATGTG---------------------CCATACAATCCATACCCACAATTTGC------------ACCCCTC---------CCCAACTGTG---GCCCTGGTGGCTGCAGCAACAACATCATCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----AGCGACGATATCCCTT---------CCCGCGATGAC-----T
droWil2 scf2_1100000004943:7297716-7297739 - CAATGTGCAGGCTGTTTCCAAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:3613669-3613754 + GAGTGCATGGGTTGCTTTCCAAGCTATATGCCACAGCCTGTGCTGATGC---------------------------CACAGC---CTGTGA---------TCTACCCACACTATTT---CGG--------TCCCA---------A------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14830:3500315-3500337 + GAATGCGTCGGCTGTTTTCAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAGTGTGGAGGCTGTTTCCAGGGATTCGGATCACCC------TATATGTACAA---CCC---GTATGGATTTAATCCG---T---TTGTGC---------CTTTCCCTTCCTACGG---AGG--------TCCCGAATAATATCCCGAATAATG---ATTTAAGCAATACAGGAAA---------------------------------------------------------CGACATAGATGACAAGAACG-------------TGGCAGGATCAGGAGAC-----------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGGAT....................2225.0010320050
........................................................................................................................................................................................................................................................GAACG-------------TGGCAGGATCAGGA...............1923.507500020
..........................................................................................................................................................................................................................................GACATAGATGACAAGAACG-------------TGGCA........................2423.006110040
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGG......................2023.006020040
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGGATC...................2322.505120020
........................................................................................................................................................................................................................................................GAACG-------------TGGCAGGATCAGGAGA.............2122.505200030
...............................................................................................................................................................................................................................................AGATGACAAGAACG-------------TGGCA........................1922.505300020
..........................................................................................................................................................................................................................................GACATAGATGACAAGAACG-------------T............................2022.004000040
.............................................................................................................................................................................................................................................ATAGATGACAAGAACG-------------TGGCA........................2122.004101020
.............................................................................................................................................................................................................................................ATAGATGACAAGAACG-------------TGGCAGG......................2322.004200020
.........GGCTGTTTCCAGGGATTCGG..........................................................................................................................................................................................................................................................................2021.503300000
..............................................................................................................................................................................AA---------------------------------------------------------CGACATAGATGACAAGAAC...........................................2121.503020010
...................................................................................................................................................................................................................................................GACAAGAACG-------------TGGCAGGATC...................2021.503120000
.......GAGGCTGTTTCCAGGGATTCGG..........................................................................................................................................................................................................................................................................2221.503110010
.............................................................................................................................................................................................................................................ATAGATGACAAGAACG-------------TGGCAGGATC...................2621.503100020
.....................................................................................................................................................................................................................................................CAAGAACG-------------TGGCAGGATCA..................1921.503100020
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCA........................1821.503101100
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------TGGCAGGATC...................2721.002100010
....................................................................................................................................................................................................................................................ACAAGAACG-------------TGGCAGGATCAGGAGA.............2521.002200000
...............................................................................................................................................................................A---------------------------------------------------------CGACATAGATGACAAGAACG-------------TGGCA........................2621.002000020
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------TGGCAGG......................2421.002000020
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGGATCAGGA...............2721.002000020
.............................................................................................................................................................................................................................................ATAGATGACAAGAACG-------------TGGCAG.......................2221.002110000
..........................................................................................................................................................................................................................................GACATAGATGACAAGAACG-------------TGGCAGG......................2621.002000020
.........................................................................................................................................................G---ATTTAAGCAATACAGGAAA---------------------------------------------------------CGAC..........................................................2421.002110000
..................................................................................................................................................................................................................................................TGACAAGAACG-------------TGGCAGGA.....................1921.002010010
.........................................................................................................................................................................................................................................CGACATAGATGACAAGAACG-------------TGGCAG.......................2621.002100010
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------TGGCAGGAT....................2621.002100010
...................................................................................................................................................................GCAATACAGGAAA---------------------------------------------------------CGACATA.......................................................2021.002011000
...................................................................................................................................................................................................................................................GACAAGAACG-------------TGGCAGGATCAGG................2321.002010010
.........................................................................................................................................................................................................................................CGACATAGATGACAAGAACG-------------T............................2121.002100010
.............................................................................................................................................................................................................................................ATAGATGACAAGAACG-------------TGGCAGGAT....................2521.002100010
..............................................................................................................................................................................AA---------------------------------------------------------CGACATAGATGACAAGAACG-------------TGGCA........................2721.002100010
...................................................................................................................................................................................................................................................GACAAGAACG-------------TGGCAGGATCAGGA...............2421.002100010
.......................................................................TAATCCG---T---TTGTGC---------CTTTCCC............................................................................................................................................................................................2121.002110000
...............................................................................................................................................................................................................................................AGATGACAAGAACG-------------TGGCAGG......................2121.002100010
............................GATCACCC------TATATGTACAA---CCC---GT.......................................................................................................................................................................................................................................2421.002010010
..........................................................................................................................................................................................................................................GACATAGATGACAAGAACG-------------TGGCAGGAT....................2821.002000020
.........................................................................................................................................................................................................................................CGACATAGATGACAAGAACG-------------TGGCA........................2521.002000020
........................................................................................................................................................................................................................................................GAACG-------------TGGCAGGATCAGG................1821.002100010
.............................................................................................................................................................................AAA---------------------------------------------------------CGACATAGATGACAAGAAC...........................................2221.002011000
.........................................................................................................................................................G---ATTTAAGCAATACAGGAAA---------------------------------------------------------CGA...........................................................2321.002020000
..........................................................................................................................................................................................................................................GACATAGATGACAAGAACG-------------TGGC.........................2321.002010010
.........GGCTGTTTCCAGGGATTCGGAT........................................................................................................................................................................................................................................................................2221.002100010
........................................................................................................................................ATAATATCCCGAATAATG---AT........................................................................................................................................2021.002002000
.............GTTTCCAGGGATTCGGATC.......................................................................................................................................................................................................................................................................1921.002200000
...................................................................................................................................................................GCAATACAGGAAA---------------------------------------------------------CGACATAGAT....................................................2321.002000002
...............................................................................................................................................................TTAAGCAATACAGGAAA---------------------------------------------------------CGACATA.......................................................2421.002010010
...................................................................................................................................................................................................................................................GACAAGAACG-------------TGGCAGGA.....................1821.002011000
..............................................................................................................................................................................AA---------------------------------------------------------CGACATAGATGACAAGAACG-------------T............................2321.002000020
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATAGAT....................................................2121.002000011
..........GCTGTTTCCAGGGATTCGGATCACCC------C............................................................................................................................................................................................................................................................2720.501010000
.............................................................................................................................................................................................................................................ATAGATGACAAGAACG-------------TGGC.........................2020.501010000
....................................................................................................CTTTCCCTTCCTACGG---AGG--------TCCCGA...............................................................................................................................................................2520.501100000
...............................................................................................................................................................................................................................................AGATGACAAGAACG-------------TGGCAGGATC...................2420.501100000
CAGTGTGGAGGCTGTTTCCAGGGATT.............................................................................................................................................................................................................................................................................2620.501000010
.............................ATCACCC------TATATGTACAA---CCC---GTATG....................................................................................................................................................................................................................................2620.501000010
.............GTTTCCAGGGATTCGGATCACCC------T............................................................................................................................................................................................................................................................2420.501100000
............................................................................CG---T---TTGTGC---------CTTTCCCTTCCTACGG---A...............................................................................................................................................................................2620.501100000
...........................................................................................................................................................................................................................................ACATAGATGACAAGAACG-------------TGGCAGGATC...................2820.501000010
...........................................................................................................TTCCTACGG---AGG--------TCCCGAAT.............................................................................................................................................................2020.501000001
.......................................................................................................................................AATAATATCCCGAATAATG---ATTTAAGC..................................................................................................................................2720.501010000
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------TGGC.........................2120.501010000
.............GTTTCCAGGGATTCGGAT........................................................................................................................................................................................................................................................................1820.501001000
........................................................................................................................................................................................................................................................GAACG-------------TGGCAGGATCAGGAGAC-----------.2220.501100000
.......................................................................................................................................................................................................................................................AGAACG-------------TGGCAGGATCAGGAGAC-----------.2320.501000001
...............................................................................................................................................................................................................................................AGATGACAAGAACG-------------TGGCAG.......................2020.501000010
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATA.......................................................1820.501001000
.........GGCTGTTTCCAGGGATTCGGAC........................................................................................................................................................................................................................................................................2220.501010000
.......................................................................TAATCCG---T---TTGTGC---------CTTTCC.............................................................................................................................................................................................2020.501010000
.................................................................................................................................................................................................................................................ATGACAAGAACG-------------TGGCAGGAT....................2120.501010000
..........GCTGTTTCCAGGGATTCGG..........................................................................................................................................................................................................................................................................1920.501010000
...............................CACCC------TATATGTACAA---CCC---GT.......................................................................................................................................................................................................................................2120.501000010
.................CCAGGGATTCGGATCACCC------.............................................................................................................................................................................................................................................................1920.501010000
.................................................................TGGATTTAATCCG---T---TTGTGC---------C..................................................................................................................................................................................................2120.501010000
.......................................................................................................................................................................................................................................................AGAACG-------------TGGCAGGATCAGGA...............2020.501100000
..................................................................................................................................................................................................................................................TGACAAGAACG-------------TGGCAGGATC...................2120.501010000
......................................................................................................................................................................................................................................................AAGAACG-------------TGGCAGGATCAGGAG..............2220.501100000
...................................................................................................................................CCCGAATAATATCCCGAATAAT..............................................................................................................................................2220.501010000
.........................................................................................................................................................G---ATTTAAGCAATACAGGAAA---------------------------------------------------------CG............................................................2220.501001000
...................................................................................................................................CCCGAATAATATCCCGAATAATG---AT........................................................................................................................................2520.501010000
..........................................................................................................................................................................................................................................GACATAGATGACAAGAACG-------------TGGCAGGA.....................2720.501100000
.............GTTTCCAGGGATTCGGAC........................................................................................................................................................................................................................................................................1820.501010000
.......GAGGCTGTTTCCAGGGATTCGGAT........................................................................................................................................................................................................................................................................2420.501100000
................................................................ATGGATTTAATCCG---T---TTGTGC---------CTTTCCC............................................................................................................................................................................................2820.501010000
...................................................................................................................................................................................................................................................GACAAGAACG-------------TGGCAGGAT....................1920.501100000
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGGA.....................2120.501000010
.................CCAGGGATTCGGATCACCC------TATATGTAC....................................................................................................................................................................................................................................................2820.501100000
......................................................................................................................................GAATAATATCCCGAATAATG---ATTTAAGC..................................................................................................................................2820.501010000
.............................................................................................................................................................................AAA---------------------------------------------------------CGACATAGATGACAAGAACG-------------TGGC.........................2720.501000010
..............................................................GTATGGATTTAATCCG---T---TTGTGC---------CT.................................................................................................................................................................................................2520.501010000
.................................................................................................................................................................................................................................................ATGACAAGAACG-------------TGGCAGG......................1920.501000010
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATAGA.....................................................2020.501001000
...............................................GTACAA---CCC---GTATGGATTT...............................................................................................................................................................................................................................1920.501001000
...................................C------TATATGTACAA---CCC---GTATGGATT................................................................................................................................................................................................................................2420.501100000
....................................................................................................................................................................................................................................................ACAAGAACG-------------TGGCAGGATCAGGAG..............2420.501100000
.........................................................................................................................................................G---ATTTAAGCAATACAGGAAA---------------------------------------------------------CGACAT........................................................2620.501000010
..............................................................................................................................................................................................................................................TAGATGACAAGAACG-------------TGGC.........................1920.501000010
............................................................................................................................................................................................................................................................G-------------TGGCAGGATCAGGAGAC-----------T1920.501100000
..........................................................................................................................................................................AGGAAA---------------------------------------------------------CGACATAGATGACAAGAAC...........................................2520.501010000
...................................................AA---CCC---GTATGGATTTAATCC..........................................................................................................................................................................................................................2020.501001000
...........CTGTTTCCAGGGATTCGGAT........................................................................................................................................................................................................................................................................2020.501000010
.............GTTTCCAGGGATTCGGATCACT....................................................................................................................................................................................................................................................................2220.501100000
...................................................................GATTTAATCCG---T---TTGTGC---------CTT................................................................................................................................................................................................2120.501010000
........................................................................AATCCG---T---TTGTGC---------CTTTCCCTTCCTACGG---................................................................................................................................................................................2920.501100000
.........................................................................................................................................................G---ATTTAAGCAATACAGGAAA---------------------------------------------------------CGACATA.......................................................2720.501001000
........................................................................................................................................................................ACAGGAAA---------------------------------------------------------CGACATAGATGAC.................................................2120.501001000
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGGATCAG.................2520.501100000
................................................................ATGGATTTAATCCG---T---TTGTGC---------CTT................................................................................................................................................................................................2420.501010000
....................................................................ATTTAATCCG---T---TTGTGC---------CTTTCCCTT..........................................................................................................................................................................................2620.501100000
.......GAGGCTGTTTCCAGGGATTCGGATC.......................................................................................................................................................................................................................................................................2520.501000001
..............................................................................................................................................................TTTAAGCAATACAGGAAA---------------------------------------------------------CGAC..........................................................2220.501000010
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------TGGCA........................2220.501000010
.................CCAGGGATTCGGATCACCC------TAT..........................................................................................................................................................................................................................................................2220.501001000
.................................................................................................................................................................AAGCAATACAGGAAA---------------------------------------------------------CGACATAGAT....................................................2520.501100000
...........................................................................................................................................................................................................................................ACATAGATGACAAGAACG-------------TGGC.........................2220.501010000
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATAGAC....................................................2120.501010000
...................................................................GATTTAATCCG---T---TTGTGC---------C..................................................................................................................................................................................................1920.501010000
................................................................ATGGATTTAATCCG---T---TTGTGC---------CT.................................................................................................................................................................................................2320.501010000
.........................................................................................GC---------CTTTCCCTTCCTACGG---A...............................................................................................................................................................................1920.501100000
....................................................................................................................................................................................................................................................ACAAGAACG-------------TGGCAGGATC...................1920.501000010
......................................................................TTAATCCG---T---TTGTGC---------CTTTCCCTTCT........................................................................................................................................................................................2620.501010000
............................................................................................................................................................................GAAA---------------------------------------------------------CGACATAGATGACAAGAACG-------------T............................2520.501010000
.............................................................................................................................................................................AAA---------------------------------------------------------CGACATAGATGACAAGAACG-------------T............................2420.501000010
..............................TCACCC------TATATGTACAA---CCC---GTATG....................................................................................................................................................................................................................................2520.501010000
......................GATTCGGATCACCC------TATATGTA.....................................................................................................................................................................................................................................................2220.501010000
...............TTCCAGGGATTCGGATCACCC------T............................................................................................................................................................................................................................................................2220.501000001
....................................................................ATTTAATCCG---T---TTGTGC---------CTTTCC.............................................................................................................................................................................................2320.501100000
................................................................ATGGATTTAATCCG---T---TTGTGC---------C..................................................................................................................................................................................................2220.501010000
......................................................................................................TTCCCTTCCTACGG---AGG--------TCCCGAAT.............................................................................................................................................................2520.501100000
.......................ATTCGGATCACCC------TATATGTACAA---CCC---GT.......................................................................................................................................................................................................................................2920.501100000
.......................ATTCGGATCACCC------TATATGTACAA---CCC---G........................................................................................................................................................................................................................................2820.501100000
.....................................................................................................TTTCCCTTCCTACGG---AGG--------TCCCGA...............................................................................................................................................................2420.501000010
.............................................................................................................................................................ATTTAAGCAATACAGGAAA---------------------------------------------------------CGACATA.......................................................2620.501001000
.............................................................................................................................................................................AAA---------------------------------------------------------CGACATAGATGACAAGA.............................................2020.501000100
............................GATCACCC------TATATGTACAA---CCC---.........................................................................................................................................................................................................................................2220.501010000
.......GAGGCTGTTTCCAGGGATTC............................................................................................................................................................................................................................................................................2020.501000010
.........................................................................................................................................................................................................................................................AACG-------------TGGCAGGATCAGGAGAC-----------.2120.501010000
........................................................................................................................................ATAATATCCCGAATAATG---ATTTAAGC..................................................................................................................................2620.501010000
......................................................................................................................................................................................................................................................AAGAACG-------------TGGCAGGATCAGGAGAC-----------T2520.501100000
CAGTGTGGAGGCTGTTTCCAGGGA...............................................................................................................................................................................................................................................................................2420.501010000
....................................................................................................................................................ATAATG---ATTTAAGCAATACA............................................................................................................................2020.501010000
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------TGGCAGGA.....................2520.501010000
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATAGATGAC.................................................2420.501010000
.........................................................................................................................................................................................................................................CGACATAGATGACAAGAACG-------------TGGC.........................2420.501000010
...............................................................................................................................................................................................................................................AGATGACAAGAACG-------------TGGCAGGAT....................2320.501000001
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATAGATGA..................................................2320.501000010
..GTGTGGAGGCTGTTTCCAG..................................................................................................................................................................................................................................................................................1920.501000010
......................................................................................................................................................................................................................................................AAGAACG-------------TGGCAGGATCAGGA...............2120.501100000
.....................................................................................................................................................................................................................................................CAAGAACG-------------TGGCAGGATCAGGA...............2220.501100000
...............................................................................................................................................................................A---------------------------------------------------------CGACATAGATGACAAGAACG-------------TG...........................2320.501000001
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAG.......................1920.501100000
.............................................ATGTACAA---CCC---GTATGGATTTAATCCG---T---..................................................................................................................................................................................................................2820.501000010
..........................................................................................................................................................................................................................................GACATAGATGACAAGAAC...........................................1820.501010000
........................................................................AATCCG---T---TTGTGC---------CTTTCCCTT..........................................................................................................................................................................................2220.501100000
.....................................................................................................................................................................AATACAGGAAA---------------------------------------------------------CGACATAGATGACAA...............................................2620.501000010
.........................................................................................................................................................................................................................................CGACATAGATGACAAGAACG-------------TGGCAGG......................2720.501100000
......................................................................................................................................................................ATACAGGAAA---------------------------------------------------------CGACATAGA.....................................................1920.501000010
CAGTGTGGAGGCTGTTTCCAGGG................................................................................................................................................................................................................................................................................2320.501000010
..............................................................................................................................................................TTTAAGCAATACAGGAAA---------------------------------------------------------CGACAT........................................................2420.501000010
..................................................................GGATTTAATCCG---T---TTGTGC---------CT.................................................................................................................................................................................................2120.501100000
............................................................................................................................................................................................................................................CATAGATGACAAGAACG-------------T............................1820.501010000
.................................................................................................................................................................................................................................................ATGACAAGAACG-------------TGGCAGGATCAGG................2520.501100000
...............................................................................................................TACGG---AGG--------TCCCGAATAATATCCC.....................................................................................................................................................2420.501010000
.............GTTTCCAGGGATTCGGATCACCC------.............................................................................................................................................................................................................................................................2320.501010000
....................................................................................................................................................................CAATACAGGAAA---------------------------------------------------------CGACATA.......................................................1920.501000010
................................................................................................................................................................................................................................................GATGACAAGAACG-------------TGGCAGGAC....................2220.501010000
droBip1
CAGTGTGGAGGCTGTTTCCAGGGTTTCGGGTCACCC------TATATGTACAA---CCC---GTATGGATTCAACCCG---T---TTATGC---------CTTTCCCTTCTTATGG---AGGCTACCCCCCGA---ACAATAACCCGAATAATG---ACTTAAGCAATACAGGAAAT---------------------------------ACTATTGGAAA------------CGAGATTGGTGACAAGAATG-------------TGGAAGGATCGGGAGAC-----------TSizeHit CountTotal NormTotal
No Reads
droKik1
CAGTGTGCAGGCTGCTTCCAGGGATTCGGAGCTCCGATGATGCCAATCTACAG---TCTCCCCTACATGTACTCTCCC---T---ATATGCCAG------CATTCCCAGGCTATGGTGGCAACTTCCCAGGCA---------------------------ACGGCAACAGCA------------------TTGGAAACCAGAA------------TGGA---------------------AAGGACAACGAAG-------------TCACAGGATCAGGGGACGATGGC-----TSizeHit CountTotal NormTotal
No Reads
droFic1
CAGTGTGCAGGTTGCTTTCAAGGGTTCGGGGCTCCCATGATGCCCATGTACAA---TGCTCCCTTTATTTATAATCCC---T---ATATGC---------CATATCCACCCTTTGG---CAACTTTCCAGGAA---A------------CTATAACA---ACGGAAATT---------------------CCGGAAATAACAATGCAATTAATAGTGAAAAGAATAATGGCAACAGCAATGCAGGGGATATAG-------------TATCAGGATCAGGAGACGGTGAA-----TSizeHit CountTotal NormTotal
No Reads
droEle1
CAGTGTGCAGGTTGTTTCCAGGGATTTGGAGCGCCCCTTATGCCTATGTACAA---TGCTCCCTACATGTACAGTCCA---T---ATGTGC---------CATATCCATCCTTCGG---CAACTTCCCTGTCA---A------------TAATAATC---ATGGAAATAATA------------------ACGGAAATAATAATGCAAATAAAAATGGAAATAACAAAAGACATGAGAATGAAGACGACATCC-------------TTGCTGGCTCGGGAAATGGTGGC-----TSizeHit CountTotal NormTotal
No Reads
droRho1
CAGTGTGCAGGTTGTTTCCAGGGATTCGGAGCGCCTA---TGCCTATGTACAA---TGCTCCTTATATGTACAATCCG---T---ATATGC---------CATATCCACCATATGG---CAACTTCCCATTAA---A------------TAATAACA---ACGGAAATAATA------------------ATGGAAATTATCATGGAAATAGCAACGGAAATAATATTGGAAATAATAATGAAGACAATATCC-------------TCGCAGGATCAGGAGATGATGGG-----TSizeHit CountTotal NormTotal
No Reads
droBia1
GAATGTGCAGGTTGCTTCCAGGGATTCGGAGCTCCCATGATGCCCATCTATAA---TTCTCCCTACATGTACAACCCA---T---TCATGC---------CCTATCCTCCGTTTGG---CAACTACCCTGGCTT---------------CAATAACA---ACGGAAATAGCA------------------ATGGAAACATCTTTGGAGGTGACAATGCAAAGAAAGATGACAATAACAAGGTTGATAGCATCA-------------TAGCGGGATCTGGAGACGATGGT-----TSizeHit CountTotal NormTotal
No Reads
droTak1
CAGTGTGCCGGTTGTTTCCAGGGCTTTGGAGCGCCCATGATGCCCATGTACAG---CTCTCCCTACATGTACAACCCA---T---TTATGG---------GATATCCACAGTTTGG---CAACTATCCACAAAT---------------GAATAATA---ATGGAAATAATA------------------ACGGAAATAACAATGCAAA------------------------TACTAATGTAGATAGCAACA-------------TCGCAGGCTTAGGCGACGATGGT-----TSizeHit CountTotal NormTotal
No Reads
droEug1
CAATGTGCAGGTTGTTTCCAGGGCTACGGAGCGCCTATGATGCCCATGTTCAA---TGCTCCTTACATGTACAATCCT---T---ATATGC---------CATATCCAAGCTTTGG---AAATTATCCAGGCCTAAA------------TAATAATA---ATGGTAACAATG------------------ACGGAAGTAGCTATGGAAATAATAATGGTAAAGTT------GATAATATTGTGGATAACACCA-------------TCGCGGGATCTGGGGATGATGGT-----TSizeHit CountTotal NormTotal
No Reads
dm3
CAGTGTGCCGGTTGTTTCCAGGGATACGGAGCTCCC------CTCATGTATAA---TCCTCCTTGGATGTACAATCCA---TATTATGTGG---------CATATCCAGCCTTTAA---CAATATACCGGCCATA---------CAGAACAATA---ATAATGGCAACAGCGGTGAC---------------------------------------------------------ACCAGTGTAGATAAAACCA-------------TTGCAGATGATGATGACGATGGATGGACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................GATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000
..............................GCTCCC------CTCATGTATAA---TC.............................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TTGCAGATGATGATGACGAT.........2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................A---ATAATGGCAACAGCGGT.........................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................A-------------TTGCAGATGATGATGACGAT.........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................GATGACGATGGATGGACT1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000
....................................................................................................................................................ACAATA---ATAATGGCAACAGCGGT.........................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................TGCAGATGATGATGACGAT.........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
..............................GCTCCC------CTCATGTATAA---T..............................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTTCCAGGGATACGGAGCTCC....................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TGATGACGATGGATGGACT1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GATGATGACGATGGATGGACT2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................TGCAGATGATGATGACGATGGATGGA..2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTGCCGGTTGTTTCCAGGGATAC............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................A---------CAGAACAATA---ATAATGGCAA................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................TGATGATGACGATGGATGGAC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GTGTAGATAAAACCA-------------TTGCAGAT.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AATATACCGGCCATA---------CAGAACAATA---TC........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GGCCATA---------CAGAACAATA---ATAATG....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTTCCAGGGATACGGAGCTCCC------CT...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TATTATGTGG---------CATATCCAG..........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CATGTATAA---TCCTCCTTGG.....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCAGATGATGATGACGATG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..GTGTGCCGGTTGTTTCCAGGGAT..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGCAGATGATGATGACGATG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................ACCA-------------TTGCAGATGATGAT...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGGCAACAGCGGTGAC---------------------------------------------------------AC...........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................ACCAGTGTAGATAAAACCA-------------TT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................AACAGCGGTGAC---------------------------------------------------------ACCAGTGT.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...TGTGCCGGTTGTTTCCAGGGAT..............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................AGTGTAGATAAAACCA-------------TTGCAGAT.....................2411.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGTGCCGGTTGTTTCCAGGGATT.............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................ATGATGATGACGATGGATGGA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................AGCGGTGAC---------------------------------------------------------ACCAGTGTAGATAA...............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................ATGATGACGATGGATGGACT2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................ACCA-------------TTGCAGATGATGATGACGAT.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATACGGAGCTCCC------CTCAT........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CAGCGGTGAC---------------------------------------------------------ACCAGTGTAGATAAA..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AACAGCGGTGAC---------------------------------------------------------ACCAGTGTAGA..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........GTTGTTTCCAGGGATACG...........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AGATGATGATGACGATGGATGGACT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AACAGCGGTGAC---------------------------------------------------------ACCAGTGTAGAT.................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GATGATGATGACGATGGATGGACT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................TGCAGATGATGATGACGATGGA......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AAAACCA-------------TTGCAGATGATGATGACGAT.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGGTTGTTTCCAGGGATACGG..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................CAACAGCGGTGAC---------------------------------------------------------ACCAGTGT.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AGCCTTTAA---CAATATACCGGCC...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................A---ATAATGGCAACAGCGGTGAC---------------------------------------------------------A............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................CGGTGAC---------------------------------------------------------ACCAGTGTAGATAAAAC............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGTGTGCCGGTTGTTTCCAGGGAT..............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GCAACAGCGGTGAC---------------------------------------------------------ACCAGTGT.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................TCCAGGGATACGGAGCTCCC------.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................ATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAGTGTGCCGGTTGTTTCCAGGG................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
............................................................................................................GCCTTTAA---CAATATACCGGCC...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGCGGTGAC---------------------------------------------------------ACCAGTGTAGA..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................TA---ATAATGGCAACAGCGGT.........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droSim2
CACTGTGCCGGTTGCTTCCAGGGATACGGAGCTCCC------CTCATGTATAA---TCCTCCTTGGATGTACAATCCA---TATTATGTGG---------CATATCCGCCCTTTAA---CAATGTACCGACCATA---------CAGAACAATA---ACAATGGCAACAGAGATGAC---------------------------------------------------------ACCAGTGTAGATAAAGCCA-------------TTGCAGATGAAGAGGCCGATGGATGGCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................CATGTATAA---TCCTCCTTGG.....................................................................................................................................................................................................................................1912.00200200000000000000
...................AGGGATACGGAGCTCCC------CT...........................................................................................................................................................................................................................................................1911.00100100000000000000
.....................................................................................................................................TA---------CAGAACAATA---ACAATGGCAACAGAG...........................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................................................................GCAGATGAAGAGGCCGATGGATGGC..2511.00100010000000000000
............................................................................................................................TACCGACCATA---------CAGAACAATA---ACAAT.....................................................................................................................................2611.00101000000000000000
............................................................................................................................................................................................................................................................A-------------TTGCAGATGAAGAGGCCGATGGATGGC..2811.00100010000000000000
...................................................................................................................................CATA---------CAGAACAATA---ACAATGGCAACAGA............................................................................................................................2811.00100010000000000000
...........................................................................................................................GTACCGACCATA---------CAGAACAAT..............................................................................................................................................2111.00100100000000000000
........................TACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................1911.00100010000000000000
................................................................................................................................................................................C---------------------------------------------------------ACCAGTGTAGATAAAGCC...........................................1911.00101000000000000000
................................................................................................................................................CAGAACAATA---ACAATGGCAACAGAG...........................................................................................................................2511.00100100000000000000
..............................................................................................................................................................................GAC---------------------------------------------------------ACCAGTGTAGATAAAGCC...........................................2111.00100100000000000000
......................................................................................................................................A---------CAGAACAATA---ACAATGGCAACAGAGG..........................................................................................................................2711.00100100000000000000
.....................................................................................................................................................................AACAGAGATGAC---------------------------------------------------------ACCAGTGT.....................................................2011.00100000000000100000
droSec2
CAGTGTGCCGGTTGCTTCCAGAGATACGGAGCTCCC------CTCATGTATAA---TCCTCCTTGGATGTACAATCCA---TATTATGTGG---------CATATCCACCCTTTAA---CAATGTACCGGCCATA---------CAGAACAATA---ATAATGGCAACAGAGATGAC---------------------------------------------------------ACCAGTGTAGATAAAGCCA-------------TTGCAGATGAAGAGGCCGATGGATGGCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................AGATGAAGAGGCCGATGGAT.....2012.0020020
...................................................................................................................................................................GCAACAGAGATGAC---------------------------------------------------------ACCAGTGT.....................................................2212.0020110
................................................................................................................................................................................................................................................GTAGATAAAGCCA-------------TTGCAGATGAAGA................2611.0010010
............................................................................................................................................................................ATGAC---------------------------------------------------------ACCAGTGTAGATAAAGCC...........................................2311.0010010
..............................................................................................................................................................................GAC---------------------------------------------------------ACCAGTGTAGATAAAGCC...........................................2111.0010100
...........................................................................................................................................................................................................................................................................TGCAGATGAAGAGGCCGATGGATGGCAT2811.0010010
.....................................................................................................................................................................AACAGAGATGAC---------------------------------------------------------ACCAGTGTA....................................................2111.0010010
.....................................................................................................................................................................AACAGAGATGAC---------------------------------------------------------ACCAGTGTAGAT.................................................2411.0010100
................TCCAGAGATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2711.0010010
..............................................................................................................................................................................GAC---------------------------------------------------------ACCAGTGTAGATAAAGC............................................2011.0011000
................................................................................................................................................................................................................................................................................ATGAAGAGGCCGATGGATG....1911.0010100
.......................ATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2011.0011000
...........................................................................................................................................................................................................................................................................TGCAGATGAAGAGGCCGATGGATGGCA.2711.0010010
.....................................................................................................................................................................AACAGAGATGAC---------------------------------------------------------ACCAGTGTAG...................................................2211.0010100
......................GATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2111.0010010
............................................................................................................................................................................................................................................................A-------------TTGCAGATGAAGAGGCCGATGGATGGC..2811.0010010
...............................................................................................................................................................................AC---------------------------------------------------------ACCAGTGTAGATAAAGCC...........................................2011.0010010
..................................................................................................................................................................................................................................................................................GAAGAGGCCGATGGATGGC..1911.0010010
......................................................................................................................................................................................................................................................AAAGCCA-------------TTGCAGATGAAGAG...............2111.0010100
........................................................................................................................................................................................................................................................AGCCA-------------TTGCAGATGAAGAGGC.............2111.0011000
.........................................................................................GG---------CATATCCACCCTTTAA---C...............................................................................................................................................................................1911.0011000
............................................................................................................................................................................................................................................................................GCAGATGAAGAGGCCGATGGATGGC..2511.0010100
.................................................ATAA---TCCTCCTTGGATGT.................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................................................................................GATGAAGAGGCCGATGGATGG...2111.0010100
.....................................................................................................................................................................AACAGAGATGAC---------------------------------------------------------ACCAGTGTAGA..................................................2311.0010100
............TGCTTCCAGAGATACGGA.........................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................................................................................GATGAAGAGGCCGATGGATG....2011.0010100
....................................................................................................................................................................................................................................................ATAAAGCCA-------------TTGCAGATGAAGA................2211.0010010
..............CTTCCAGAGATACGGAGC.......................................................................................................................................................................................................................................................................1811.0010010
...............TTCCAGAGATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2811.0010100
..........................................................CTCCTTGGATGTACAATCC..........................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................AATA---ATAATGGCAACAGAGAT.........................................................................................................................2111.0010100
..........................................................................................................................................................................................................................................................................TTGCAGATGAAGAGGCCGATGGATGG...2611.0010010
..........................................................................................................................................................................................................................................................................TTGCAGATGAAGAGGCCGATGGAT.....2411.0010010
............................................................................................................................................................................................................................................................................GCAGATGAAGAGGCCGATGGATGGCAT2711.0010100
.............................................................................................................................................................ATAATGGCAACAGAGATGAC---------------------------------------------------------ACCAGT.......................................................2611.0010100
..............CTTCCAGAGATACGGAGCTCCC------CTCATGT......................................................................................................................................................................................................................................................2911.0010100
..................CAGAGATACGGAGCTCCC------CTCA.........................................................................................................................................................................................................................................................2211.0010010
droYak3
CAGTGTGCAGGCTGCTTCCAGGGATACGGAGCTCCA------CTCATGTATAA---TCCGCCTTGGATGTACAATCCC---T---ATGTGG---------CATATCCACCCTTTAA---CAATTTTCCGGCCATG---------AACAACAATA---ACTATGGAAACAAGGACGAA---------------------------------------------------------ACCAATGTGGACACC----AATGAAGAGACCCACGCAGGTTCAGGTGATG---GATGGATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................GACCCACGCAGGTTCAGGT...............1913.00303000000000
.......................ATACGGAGCTCCA------CTCATGT......................................................................................................................................................................................................................................................2013.00302000010000
........AGGCTGCTTCCAGGGATACGGAGC.......................................................................................................................................................................................................................................................................2412.00200200000000
........................TACGGAGCTCCA------CTCATGT......................................................................................................................................................................................................................................................1912.00202000000000
.......................................................................................................................................................ATA---ACTATGGAAACAAGGAC.........................................................................................................................2012.00210000010000
..................................................................................................................................................................................................................................................GGACACC----AATGAAGAGACCCACGCAG.......................2611.00100000010000
......................................................................................................................................G---------AACAACAATA---ACTATGGAAAC...............................................................................................................................2211.00101000000000
..........GCTGCTTCCAGGGATACGGAGCTCC....................................................................................................................................................................................................................................................................2511.00100000100000
......................................................................................................................................G---------AACAACAATA---ACTATGGAAACAAGGA..........................................................................................................................2711.00101000000000
...................................................................................................................................CATG---------AACAACAATA---ACTATGG...................................................................................................................................2111.00101000000000
....................................................................GTACAATCCC---T---ATGTGG---------CATATCCACCC........................................................................................................................................................................................2811.00101000000000
........................TACGGAGCTCCA------CTCATGTA.....................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................ATGTGGACACC----AATGAAGA..................................1911.00100000010000
......................GATACGGAGCTCCA------CTCATGTATAA---T..............................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................ACAATA---ACTATGGAAACAAGGACG........................................................................................................................2411.00100100000000
....................GGGATACGGAGCTCCA------CC...........................................................................................................................................................................................................................................................1811.00110000000000
......................................................................................................................................G---------AACAACAATA---ACTATGGAAACAAGGAC.........................................................................................................................2811.00100100000000
.....................................................................................................................................................................AACAAGGACGAA---------------------------------------------------------ACCAATGT.....................................................2011.00100000010000
..........GCTGCTTCCAGGGATACGGAGCTCCA------CC...........................................................................................................................................................................................................................................................2811.00100100000000
.........................................................................................................CCACCCTTTAA---CAATTTTCCGGC....................................................................................................................................................................2311.00101000000000
............TGCTTCCAGGGATACGGAGCTCCA------CT...........................................................................................................................................................................................................................................................2611.00101000000000
................................................................................................................................GGCCATG---------AACAACAATA---ACTATGGA..................................................................................................................................2511.00101000000000
..........GCTGCTTCCAGGGATACGG..........................................................................................................................................................................................................................................................................1911.00100000010000
...............................................................................................................TTTAA---CAATTTTCCGGCCAT.................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................CACGCAGGTTCAGGTGATG---........1911.00100000010000
.............................................................................................................................................................................................................................................................AATGAAGAGACCCACGCAGGTTCAGGTG..............2811.00100100000000
.........................................................................................................................................................A---ACTATGGAAACAAGGAC.........................................................................................................................1811.00100100000000
..................................................................................................................................................CAACAATA---ACTATGGAAACAAG............................................................................................................................2211.00100000010000
............................................CATGTATAA---TCCGCCTTGGATGT.................................................................................................................................................................................................................................2311.00100000010000
.............................................ATGTATAA---TCCGCCTTGGATGT.................................................................................................................................................................................................................................2211.00101000000000
......................................................................................................................................................AATA---ACTATGGAAACAAGGACGAA---------------------------------------------------------ACC..........................................................2711.00100100000000
......................GATACGGAGCTCCA------CTCATGTA.....................................................................................................................................................................................................................................................2211.00100000010000
.....TGCAGGCTGCTTCCAGGG................................................................................................................................................................................................................................................................................1820.50101000000000
droEre2
CAATGTGCAGCCTGCTTCCAGGGATACGGATCTCCA------CCCATGTACTCCAGTCCTATTTTGATGTACAATCCC---T---ACGTGG---------CGTATCCAATCATTAA---CAATTTCCCGCCCACA---------AACGACAACA---ACTATGCAGACAACGACGAC---------------------------------------------------------ACCGATGTAGACAAGACCA-------------ACGCAGGTTCAGATGACG-----------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................CAACGACGAC---------------------------------------------------------ACCGATGTAGACA................................................2312.0020001100
...TGTGCAGCCTGCTTCCAGGGA...............................................................................................................................................................................................................................................................................2112.0021000010
.......................ATACGGATCTCCA------CCCATGTACTCCA................................................................................................................................................................................................................................................2612.0020000200
.......................ATACGGATCTCCA------CCCATGTACTCC.................................................................................................................................................................................................................................................2512.0022000000
.......................ATACGGATCTCCA------CCCATGT......................................................................................................................................................................................................................................................2012.0020100010
........................TACGGATCTCCA------CCCATGT......................................................................................................................................................................................................................................................1912.0021000010
...............................................................TTGATGTACAATCCC---T---ACGTGG---------CGTATCC............................................................................................................................................................................................2911.0011000000
.......................ATACGGATCTCCA------CCCAT........................................................................................................................................................................................................................................................1811.0011000000
..............................................................TTTGATGTACAATCCC---T---ACGTGG---------CGT................................................................................................................................................................................................2611.0010000100
................................................................................................................................................................................................................................................GTAGACAAGACCA-------------ACGCAGGT.....................2111.0010000100
CAATGTGCAGCCTGCTTCCAGGG................................................................................................................................................................................................................................................................................2311.0011000000
...........................GGATCTCCA------CCCATGTACTCCAGT..............................................................................................................................................................................................................................................2411.0011000000
......................................................................................................................................A---------AACGACAACA---ACTATGCAGAC...............................................................................................................................2211.0010000100
.........................................................................................................................................................A---ACTATGCAGACAACGACGAC---------------------------------------------------------ACC..........................................................2411.0010100000
......................................................................ACAATCCC---T---ACGTGG---------CGT................................................................................................................................................................................................1811.0010000100
....................................................................GTACAATCCC---T---ACGTGG---------CGT................................................................................................................................................................................................2011.0010010000
......................GATACGGATCTCCA------CCCATGT......................................................................................................................................................................................................................................................2111.0010001000
...................................................................TGTACAATCCC---T---ACGTGG---------CGTATCC............................................................................................................................................................................................2511.0010000100
..................................................CTCCAGTCCTATTTTGATGTACA..............................................................................................................................................................................................................................2311.0010001000
....................................................................GTACAATCCC---T---ACGTGG---------CG.................................................................................................................................................................................................1911.0010000010
.....................................................................................................................................................................GACAACGACGAC---------------------------------------------------------ACCGATGT.....................................................2011.0011000000
....................................................................GTACAATCCC---T---ACGTGG---------C..................................................................................................................................................................................................1811.0011000000
................................................................................................................................................................ATGCAGACAACGACGAC---------------------------------------------------------ACC..........................................................2011.0010000010
.........................ACGGATCTCCA------CCCATGTACTC..................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................................................................................A---ACTATGCAGACAACGACGAC---------------------------------------------------------ACCGAT.......................................................2711.0011000000
.....................................................................................................................................................................GACAACGACGAC---------------------------------------------------------ACCGAT.......................................................1811.0011000000
......................GATACGGATCTCCA------CCCATGTACTCCA................................................................................................................................................................................................................................................2711.0011000000
.................................................ACTCCAGTCCTATTTTGATGT.................................................................................................................................................................................................................................2111.0010000010
...............TTCCAGGGATACGGATCTCCA------CCCA.........................................................................................................................................................................................................................................................2511.0010100000
.............................................................................................................................................................................CGAC---------------------------------------------------------ACCGATGTAGACAAGAC............................................2111.0010000100
.AATGTGCAGCCTGCTTCCAGGGATACG...........................................................................................................................................................................................................................................................................2711.0010000100
.......................ATACGGATCTCCA------CCCATGC......................................................................................................................................................................................................................................................2011.0010100000
......................................................................................................................................................................ACAACGACGAC---------------------------------------------------------ACCGATGTA....................................................2011.0010000010
................................................................................................................................................................ATGCAGACAACGACGAC---------------------------------------------------------ACCGAT.......................................................2311.0011000000
..............................................................................................................................................................CTATGCAGACAACGACGAC---------------------------------------------------------ACC..........................................................2211.0010001000
.......................................................................CAATCCC---T---ACGTGG---------CGTATCCA...........................................................................................................................................................................................2211.0011000000
.....................................................................................................................................................................GACAACGACGAC---------------------------------------------------------ACCGATGTAGAC.................................................2411.0010100000
..................................................................ATGTACAATCCC---T---ACGTGG---------CGTATC.............................................................................................................................................................................................2511.0010100000
..............................................................................................................................................................................GAC---------------------------------------------------------ACCGATGTAGACAAGACC...........................................2111.0010000100
......................GATACGGATCTCCA------CCCATGTACTCC.................................................................................................................................................................................................................................................2611.0011000000
.............GCTTCCAGGGATACGGATCTC.....................................................................................................................................................................................................................................................................2111.0010000100
.............................................................................................................................................................................................................................................GATGTAGACAAGACCA-------------ACGCAGG......................2311.0011000000
.......................................................................................................................................................................CAACGACGAC---------------------------------------------------------ACCGATGTAGACAA...............................................2411.0011000000
...................................................................................................................................CACA---------AACGACAACA---ACTATGCA..................................................................................................................................2211.0011000000
..................................................................ATGTACAATCCC---T---ACGTGG---------CG.................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................GATGTAGACAAGACCA-------------ACGCAGGTT....................2511.0010100000
....................................................................................................................................ACA---------AACGACAACA---ACTATGC...................................................................................................................................2011.0011000000
dp5
CAGTGCGCGGGCTGCTTCCTGGGCTATTCGGCTCCCTTCCAGCCCCAGTACTA---CGCTCCATATGTG---------------------CCATACAATCCATACCCACAATTTGC------------ACCCCTC---------CCCAACTGTG---GCCCTGGTGGCTGCAGCAACAACATCATCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----AGCGACGATATCCCTT---------CCCGCGATGAC-----TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................CCTGGTGGCTGCAGCAACAACATC................................................................................................................2412.0020020000000
............................................................................................ATACAATCCATACCCACAATTTGC------------.......................................................................................................................................................................2411.0010010000000
........................................................................................................................................................................................................GAT------------TGG--------------------------AGCCC----AGCGACGA..................................1911.0010100000000
.................................................................................................................................................................................AACATCATCGATG---GA-TCGCGAT------------TGG--------------------------A..................................................2611.0010100000000
...........................................................................................................................................................................AGCAACAACATCATCGATG---......................................................................................................1911.0010100000000
.................................................................................................................TGC------------ACCCCTC---------CCCAACTGTG---GC........................................................................................................................................2211.0010100000000
................................................................................................................................ACCCCTC---------CCCAACTGTG---GC........................................................................................................................................1911.0010100000000
...........................................................................................................................................................................AGCAACAACATCATCGATG---GA-T..................................................................................................2211.0010100000000
............................................................................................................................................................................GCAACAACATCATCGATG---GA-TCGC...............................................................................................2411.0010000100000
.............................................................................................................................................................................................G---GA-TCGCGAT------------TGG--------------------------AGCCC----AGC.......................................2111.0010100000000
......GCGGGCTGCTTCCTGGGC...............................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................AGCAACAACATCATCGATG---GA-TCGC...............................................................................................2511.0010000100000
.....................................................................................................................................................................................................CGCGAT------------TGG--------------------------AGCCC----AGCGAC....................................2011.0010100000000
................................TCCCTTCCAGCCCCAGTACTA---C..............................................................................................................................................................................................................................................2211.0010010000000
...............................................................................................................................................................CCTGGTGGCTGCAGCAAC......................................................................................................................1811.0010100000000
...............................................................................................................................................................CCTGGTGGCTGCAGCAACAACAT.................................................................................................................2311.0010100000000
.AGTGCGCGGGCTGCTTCCTGGGC...............................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
CAGTGCGCGGGCTGCTTCCTGGGCTATTCGGCTCCCTTCCAGCCCCAGTACTA---CGCTCCATATGTG---------------------CCATACAATCCATACCCACAATTTGC------------ACCCCTC---------CCCAACTGTG---GCCCTGGTGGCTGCAGCAACAACATCATCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----AGCGACGATATCCCTT---------CCCGCGATGAC-----TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................CCTGGTGGCTGCAGCAAC......................................................................................................................1813.003300000
........................................................................................................................................................................................TCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----..........................................2313.003300000
.........................................................................................................................................................................................CGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----..........................................2212.002200000
.........................................................................................................................................................................................CGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----AG........................................2412.002200000
...............................................................................................................................................................CCTGGTGGCTGCAGCAACAACATC................................................................................................................2412.002200000
.....................................................................................................................................................................................................CGCGAT------------TGG--------------------------AGCCC----AGCGAC....................................2011.001010000
...................................................................................................................................................................................CATCATCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----..........................................2811.001100000
..GTGCGCGGGCTGCTTCCTGGGC...............................................................................................................................................................................................................................................................................2211.001100000
..GTGCGCGGGCTGCTTCCTG..................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................................................................................................................CATCGATG---GA-TCGCGAT------------TGG--------------------------AGCCC----AGC.......................................2811.001100000
droWil2
CAATGTGCAGGCTGTTTCCAAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..ATGTGCAGGCTGTTTCCAA..................................................................................................................................................................................................................................................................................1911.00101000
....GTGCAGGCTGTTTCCAAGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2011.00100010
droMoj3
GAGTGCATGGGTTGCTTTCCAAGCTATATGCCACAGCCTGTGCTGATGC---------------------------CACAGC---CTGTGA---------TCTACCCACACTATTT---CGG--------TCCCA---------A------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................TGTGCTGATGC---------------------------CACAGC---CTGT..............................................................................................................................................................................................................2112.002200000
...........TTGCTTTCCAAGCTATATGCCAC.....................................................................................................................................................................................................................................................................2311.001100000
......................................TGTGCTGATGC---------------------------CACAGC---CTGTGA---------TCTAC..............................................................................................................................................................................................2811.001100000
.........................................................................................GA---------TCTACCCACACTATTT---CG..............................................................................................................................................................................2011.001100000
..................CCAAGCTATATGCCACAGC..................................................................................................................................................................................................................................................................1911.001100000
....GCATGGGTTGCTTTCCAAG................................................................................................................................................................................................................................................................................1911.001100000
........................................TGCTGATGC---------------------------CACAGC---CTGTGA---------TCTACC.............................................................................................................................................................................................2711.001100000
......................................................................................TGTGA---------TCTACCCACACTATTT---CGG--------TC...................................................................................................................................................................2611.001100000
................................................C---------------------------CACAGC---CTGTGA---------TCTACCC............................................................................................................................................................................................2011.001100000
............TGCTTTCCAAGCTATATGCCACAGCCT................................................................................................................................................................................................................................................................2711.001100000
........................TATATGCCACAGCCTGTGCTGATGC---------------------------...........................................................................................................................................................................................................................2511.001100000
.........................ATATGCCACAGCCTGTGCTGATGC---------------------------C..........................................................................................................................................................................................................................2511.001100000
...............TTTCCAAGCTATATGCCACA....................................................................................................................................................................................................................................................................2011.001100000
..............CTTTCCAAGCTATATGCCACAGC..................................................................................................................................................................................................................................................................2311.001100000
droGri2
GAATGCGTCGGCTGTTTTCAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CGTCGGCTGTTTTCAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.00110

Generated: 05/18/2015 at 05:56 AM