ID:

dan_2886

 Coordinate:

scaffold_13340:3754977-3755127 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.6 -28.6 -28.6

Flybase annnotation

CDS [Dana\GF17263-cds]; exon [dana_GLEANR_18530:2]; intron [Dana\GF17263-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCTCCAGACTTTCCTCCGATAACATCACACTCAGCTTTATCAAAATTTTTCGCCCCATCGCCCAAAAAAAAAGAATAAATTGGGGGTTGATGTGCGGACAAGTCCGATAAGATAAACCCCCAGAGTAACCGGTTTTATGTATAGCCCTCATGCATATTTACATACTAAATTTGTGGTATTCTCTTTTTATACTCCGTAGCGATTATCTCTTTAAACTGTTGCTGATTGGAGATTCGGGCGTTGGAAAGT
**************************************************...................(((((((.....(((((((((....((((((....)))).)).....)))))))))........((..(((((((.......)))))))...))((((((......))))))..)))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V055
head
 V039
embryo
 V105
male body		 V106
head
...........................................................................................................................................................................................................................GTTGCTGATTGGAGATTCGGG........... 21 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................GCGGACAAGTCCGATAAGATAAACCC.................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................TTAAACTGTTGCTGATTGGA................... 20 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................................................CGTTAAACTGTTGCTGATTGGA................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................GGAGATTCGGGCGTTGGAAAGT 22 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................ATACGATTATCTCTTTAAACTGTTGCT.......................... 27 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................GTTGCTGATTGGAGATTCGGGC.......... 22 0 1 1.00 1 0 0 0 1 0 0
...........................................................................................................................................................................TTTGTGGTATTCTCGCTTCATA.......................................................... 22 3 1 1.00 1 0 0 1 0 0 0
........................CATCACACTCAGCTTTATCGT.............................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................................................................................................GAGATTCGGGCGTTGGAA... 18 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................GGAGATTCGGGCGTTGGAAA.. 20 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................ATACGATTATCTCTTTAAACTGTT............................. 24 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................GTTGCTGATTAGAGATTCGGGC.......... 22 1 1 1.00 1 0 0 0 0 1 0
..........................................................................................GATGTGCGGACAAGTCCGATAAGATAAA..................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1
.............................................................................................................................................................................................................TATCTCTTTAAACTGTTGCTGTTTGGA................... 27 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................AGCTCTTTAAACTGTTGCTGAT....................... 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................ATACGATTATCTCTTTAAACTGTTGC........................... 26 3 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................ATTGGAGATACGGGCGAT....... 18 2 3 0.33 1 0 0 1 0 0 0
........................................................ACATCGCCCAAGAAAAAAGA............................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0
........................CACCACAATCAGCTTTAT................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 1 0 0
.............................................................................................................................................TATAGCCTTCATTCATATT........................................................................................... 19 2 9 0.11 1 0 0 0 1 0 0
.................................................................................................................................................................ACATAGTAAATTTGTAGT........................................................................ 18 2 10 0.10 1 0 0 0 1 0 0
............................................................................................................................................................................................TTATACTTCGTATTGATTATC.......................................... 21 3 10 0.10 1 0 0 1 0 0 0
...........................................................................................................................................................................TTTGTGGTAGTCTCGTTGTA............................................................ 20 3 10 0.10 1 0 0 1 0 0 0
...........................................................................................................GATAAGACAGACCCCCAGAA............................................................................................................................ 20 3 11 0.09 1 1 0 0 0 0 0
................................................................................................................................................................................................................................TGATTAGAGATTCCGGGGT........ 19 3 20 0.05 1 0 0 0 0 1 0
.......................................TATTCAAATTTTTCGCCC.................................................................................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GAGGAGGTCTGAAAGGAGGCTATTGTAGTGTGAGTCGAAATAGTTTTAAAAAGCGGGGTAGCGGGTTTTTTTTTCTTATTTAACCCCCAACTACACGCCTGTTCAGGCTATTCTATTTGGGGGTCTCATTGGCCAAAATACATATCGGGAGTACGTATAAATGTATGATTTAAACACCATAAGAGAAAAATATGAGGCATCGCTAATAGAGAAATTTGACAACGACTAACCTCTAAGCCCGCAACCTTTCA
**************************************************...................(((((((.....(((((((((....((((((....)))).)).....)))))))))........((..(((((((.......)))))))...))((((((......))))))..)))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 V055
head
 M044
female body
 M058
embryo
 V106
head
.............................................................................................................................................ATCTCGGGAGTAGGTATA............................................................................................ 18 2 1 3.00 3 3 0 0 0 0
.............................................................................................................................................ATATGGGGAGTAGGTATAAA.......................................................................................... 20 2 1 1.00 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGGAGTACGTATA............................................................................................ 18 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................ATCTCGGGAGTACGTATACATC........................................................................................ 22 3 1 1.00 1 0 1 0 0 0
..............GGACGCTATTGTACTGTGAGTCA...................................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 1 0 0
.............................................................................................................................................ATGTAGGGAGTACGTATAAAT......................................................................................... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGGAGTACGTATACAT......................................................................................... 21 2 1 1.00 1 0 1 0 0 0
.............................................................................................................................................ATGTCGGGAGTAGGTATA............................................................................................ 18 2 20 0.90 18 18 0 0 0 0
.............................................................................................................................................CTATCTGGAGTACGTATA............................................................................................ 18 2 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGGAGTAGGTATAAT.......................................................................................... 20 3 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ATATCGGGAGTTCGTATA............................................................................................ 18 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ATTTCGGGAGTACGTATA............................................................................................ 18 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ATATCGGGAGTGGGTATA............................................................................................ 18 2 8 0.50 4 4 0 0 0 0
.............................................................................................................................................ATGTCGGGAGTCCGTATA............................................................................................ 18 2 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ATATCGGGAGTTCGGATA............................................................................................ 18 2 2 0.50 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGGAGTTCGTATA............................................................................................ 18 2 20 0.40 8 8 0 0 0 0
...................................................AGCGGGGTATCGGGTTT....................................................................................................................................................................................... 17 1 3 0.33 1 0 1 0 0 0
.............................................................................................................................................ATATCGGGAGTTCGTATAC........................................................................................... 19 2 3 0.33 1 1 0 0 0 0
..................................................AAGCGGGGTAATGGGTTT....................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0
.............................................................................................................................................ATGTCGGGACTACGTATACA.......................................................................................... 20 3 4 0.25 1 1 0 0 0 0
.............................................................................................................................................ATATTGGGAGTCCGTATA............................................................................................ 18 2 4 0.25 1 1 0 0 0 0
................................................CAAAGCGGGGATGCGGGTTT....................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0
.................................................AAAGCGGGGATGCGGGTT........................................................................................................................................................................................ 18 2 5 0.20 1 0 1 0 0 0
.............................................................................................................................................ATCTCGGGAGTTCGTATA............................................................................................ 18 2 5 0.20 1 1 0 0 0 0
............................................................................................................................................CATATCGGGAGTTGGTATA............................................................................................ 19 2 5 0.20 1 1 0 0 0 0
.............................................................................................................................................ATATGGGGAGTTCGTATA............................................................................................ 18 2 5 0.20 1 1 0 0 0 0
.............................................................................................................................................ATGTCCGGAGTACGTATA............................................................................................ 18 2 5 0.20 1 1 0 0 0 0
................AGGGTATGGTAGTGTGAGAC....................................................................................................................................................................................................................... 20 3 11 0.18 2 0 0 1 0 1
.............................................................................................................................................AGTTCGGGAGTACGTATA............................................................................................ 18 2 6 0.17 1 1 0 0 0 0
......................TGGTAGTGTGAGACGGAATA................................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 1 0 0
GAGGTGGTCTCAAAGGAGG........................................................................................................................................................................................................................................ 19 2 6 0.17 1 0 0 1 0 0
.............................................................................................................................................ATCTCGGGAGTCCGTATACA.......................................................................................... 20 3 6 0.17 1 1 0 0 0 0
..................................................AAGCGGGGTCACGGGTTT....................................................................................................................................................................................... 18 2 7 0.14 1 0 1 0 0 0
.............................................................................................................................................ATCTCGGGAGTACGTAAA............................................................................................ 18 2 7 0.14 1 1 0 0 0 0
.................................................AGAGCGGGGATGCGGGTTT....................................................................................................................................................................................... 19 3 16 0.13 2 0 2 0 0 0
.............................................................................................................................................ATATCGGGAGTCGGTATA............................................................................................ 18 2 9 0.11 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGTAGTTCGTATAAAT......................................................................................... 21 3 9 0.11 1 0 1 0 0 0
...................................................................................................................................................GAAGTATGTATAAATGTAAGAT.................................................................................. 22 3 11 0.09 1 0 1 0 0 0
.............................................................................................................................................ATTTTGGGAGTACGTATA............................................................................................ 18 2 11 0.09 1 1 0 0 0 0
...................................................AGCGGGGATGCGGGTTT....................................................................................................................................................................................... 17 2 12 0.08 1 0 1 0 0 0
..............................................GCAAAAGCGGGGAAGCGGGT......................................................................................................................................................................................... 20 3 12 0.08 1 0 1 0 0 0
................AGGCTGTTGTCGTGTGAG......................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 1 0 0
.............................................................................................................................................ATATCGGTAGTAGGTATA............................................................................................ 18 2 13 0.08 1 1 0 0 0 0
..............................................................................................................................................................................CACCATGAGAGAAAAACAAG......................................................... 20 3 14 0.07 1 0 0 0 1 0
..................................................AAGCGGGGATGCGGGTT........................................................................................................................................................................................ 17 2 17 0.06 1 0 1 0 0 0
............................................................................................................................................................................AACACCAGAAGAGAAAAAAA........................................................... 20 2 18 0.06 1 0 0 0 1 0
............................................................................................................................................CATATCGCGAGTTAGTATA............................................................................................ 19 3 19 0.05 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGGAGTAAGTATACAT......................................................................................... 21 3 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................AGAGAAAAATATGACGTA.................................................... 18 2 20 0.05 1 0 0 1 0 0
....................CATTATAGAGTGAGTCGA..................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
.............................................................................................................................................ATCTCGGGAGTTCGTATAC........................................................................................... 19 3 20 0.05 1 1 0 0 0 0
.............................................................................................................................................ATATCGGGAGTAGGTTTTA........................................................................................... 19 3 20 0.05 1 1 0 0 0 0
.............................................................................................................................................ATGTCGGGACTGCGTATA............................................................................................ 18 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:3754927-3755177 - dan_2886 CT------CC---TCCA----------GACTTTCCTCCGATAA-CATCACAC------------------------------------------TCAGCTTTATCAAAATT----TTTCGCCCCATCGCCC---AAA--AAAAAAGAATAAATTGGGGGTTGATGTGCGGACA----AGTCCGATAAGATAAAC-CCCCAGAGTAACCGGTTTTATGT--ATAG---------------------CCCTCATGCATATTTACATACTAAATTTGT-GGTATT--------------------------------------------------------------------------------CTCT--------------------------TTTTATACTCCGTAGCGATTATCTCTTTAAACTGTTGCTGATTGGAGATTCGGGCGTTGGAAAGT
droBip1 scf7180000396395:586682-586933 + CT------------CCA----------GACTTTCCTCCGATCA-CATCACAC------------------------------------------GCAACTTTATCAAG-TA----CTTCGCCCCATCAGCCACCAAAATAAAAAAGAATAAATTGGGGGTTGATGTGCGGACA----AGTCCGATAAGATAAAC-CCCCAGAGTAACCGGTTTTATGT--ATAG---------------------CCCTCATGCATATTTACATACTAATTGTGT-GGTGTT--------------------------------------------------------------------------------CTCT--------------------------CTCTATGCTCCACAGCGATTATCTCTTTAAACTGTTGCTGATTGGCGATTCGGGCGTTGGAAAGT
droKik1 scf7180000302461:226459-226619 - -----------------------------------------------------------------------------------------------------------------------------------------------------AAATTGGGGGTTGATGT-TGGTCAT-ATACATCGATAAGATAAAG-CCTCGTAGAAACCGGTTTTATTTGAATA--------------------------------TATTCACAGACTAACCAAAG-TG-------------------------------------------------------------------------------------TAT--------------------------CCTCCTATTTCACAGCGATTATCTCTTTAAACTGCTGCTTATTGGAGATTCGGGCGTTGGAAAGT
droFic1 scf7180000454096:377654-377798 - CG-----------TCTA--------GAAAGTCTCCTCAAATCGCCAGCATT----------------------------------TAGCAGACTGTAACATTATCAA---------------ACA---ACC----------------AGAATTGGGGGGTTGATGT-TGGACAC---AACGCGATAAGATAAAGGCCTCGCGCAAACTGGTTTTATGC--ATA----------------------------------TTCAGAGACTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT
droEle1 scf7180000491104:1624072-1624228 - TTGATTTGCAAAGTCCA--------GAAAGTCTCTTCCAATCGCCAGCATATATA----------------T--GTA--TGTACATAGGTTATTGTAACATTATCAT---------------ACATCACCC----------------AGAAATTGGGGGTTGATGT-TGGACAT---AACGCGATAAGATAAAG-CCTCGCGCAAACCGGTTTTATGC--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000770717:16025-16163 - TTGATTCGCATAATCCT--------GGAAGTCTTCT--------------ATATG------------------------TATACATAGGTTATTGTAACATTATCAC---------------ATATCACCC----------------AAAAATTGGGGGTTGATGT-TCGAGCT---AACACGATAAGATAAAG-CCTCGCGCAAACCGGTTTTATGC--TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302155:470805-470937 - CG------CACAGTCTA--------GAAACTATCCTTCTATC-----------TG------------------------TAAC--CAAATGATTATAGCACTATCAC---------------ACATCACCC----------------AGAAATTGGGGGTTGATGT-TGGACAT---GGCACGATAAGATAAAG-CCCATAGCAAACCGGTTCTGTGA--AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415417:275047-275386 + CG------CACCGTCTA--------GAAACTCTCCTTCTATA---------------------------------------AG--TATGAGATTGTAACATTATCAC---------------ATATCGCTT----------------GGAAATTGGGGGTTGATGT-TGGACAT---CGTGCGATAAGATAAAG-CCTGTAGTAAACCGGTTTTATGA--ATA----TATTACTTTCT--------------------GTAGAGACTAAACTATGCCCTCTTTCCGGGTACTCAAAAGTATCTCCTAAAAACTATCTCGAATCTACTTCCTCCCAAGTCACAACTTAAATACTGAACTTTGTATCTATCTATATATCTCAACTGACCAATTATCTCCTTTTCCCCAGTGACTATCTCTTCAAACTGCTGCTCATCGGAGACTCGGGCGTTGGAAAGT
droEug1 scf7180000409542:38893-39044 + CG------TAAAGTTTG--------GAAACTCTCCTCCAAAAGCCAGCATATGTA----------------AA-ATATATATG--TAGAAGATTTTAACATTATCAC---------------ACATCATTC----------------AAAAATTGGGGGTTGATGT-CGGACAT---AACGCGATAAGATAAAG-TCTAAAGCAAACCGGTTTTATGC--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:17093809-17093953 - CG------CACTCTCCA--------GAAAGCCTCCTTCAATAGCCAGCATACATG------------------------TGTG--CAGAGGATTGGAACACTATCGC---------------ATATCATTC----------------AGCAATTGGGGGTTGATGT-TGGACAT---AGCATGATAAGATAAAG-CCTAAACCAAACCGGTTTTATGT--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:4213624-4213768 + CA------CACTCTCCA--------GAAAGCCTTCTCCAATCGCCAGCATACATG------------------------TGTG--CAGAGGATTGGAACACTATCGC---------------ACATCACTC----------------AACAATTGGGGGTTGATGT-TGGACAT---AGCATGATAAGATAAAG-CCTACACCAAACCGGTTTTATGT--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_38:35327-35467 + CT----------CTCCA--------GAAAGCCTCCTCCAATCGCCAGCATACATG------------------------TGTG--CAGAGGATTGGAACACTATCGC---------------ACATCACTC----------------AACAATTGGGGGTTGATGT-TGGACAT---AGCATGATAAGATAAAG-CCTAAACCAAACCGGTTTTATGT--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:5884176-5884320 - CG------CACTCTCTA--------GAAAGCCTCCTCCAATCGTCAGCATACATA------------------------TGTG--CGGAGGATTGAAACACCGTCGC---------------ACATCACTC----------------AGCAATTGGGGGTTGATGT-TGGACAT---AGCACGATAAGATAAAG-TCTAAACCAAACCGGTTCTATGC--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:4566478-4566654 + TTGGCTCGCACTCTTTA--------GAAAGGCTCCTCCAAACG-CAGCATACATA------------------------TGTG--CAGAGTATTAAAACACTATCGC---------------ACATCACCC----------------AGCAATTGGGGGTTGATGT-TGGACAT---AGTACGATAAGATAAAG-CCTAAACCAAACCGGTTTTATGC--AAACACATATTAGTATCT--------------------TAACCTACTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:5594289-5594568 - TG------TCTCC---TGAGCTATGGAATCTCTGGTCCTATCA-CTGCAT-CGCGAGTGACGAGTTACGAGATA-------TT--TAGATG--TTTAGCTTTATCAAAATTCTCAT---------TTGGTT----------------TTTAATTGGGGGTTGATGT-TGGGTACCCTATATCGATAAGATAACT---CAGACTTAA-----TATATGT--ACACACACTGTGGCGTTTTGTGATACCCTCATGAATATTAAG---------------------------------------------------------------------------------------------ACTTTGCATAT--------------------------TCTTCACTTCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGAGATTCCGGCGTTGGAAAGT
droPer2 scaffold_19:1310885-1311164 - TG------TCTCC---TGAGCTATGGAATCTCTGGTCCTATCA-CTGCAT-CGCGAGTGACGAGTTACGAGATA-------TT--TAGATG--TTTAGCTTTATCAAAATGCTCAT---------TTGGTT----------------TTTAATTGGGGGTTGATGT-TGGGTACCCTACATCGATAAGATAACT---CAGACTTAA-----TATATGT--ACACACACTGTGGCGTTTTGTGATACCCTCATGAATATTAAG---------------------------------------------------------------------------------------------ACTTTGCATAT--------------------------TCTTCACTTCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGTGATTCCGGCGTTGGAAAGT
droWil2 scf2_1100000004943:16072433-16072508 - TA------TTCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT--------------------------TTTTACACTTTTCAGCGATTATCTATTCAAATTGCTGTTGATCGGTGACTCTGGAGTTGGAAAAT
droVir3 scaffold_12822:1246952-1247040 + CA------CATTTGTTC--------TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--------------------------------------------------------------------------------TTTT--------------------------TTTTGTGTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGT
droMoj3 scaffold_6473:11768238-11768325 - AT------------------------------------------------ACATA------------------------TGTG--CATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACATATC-TG-------------------------------------------------------------------------------------------------------------------TATGCTCTTTCAATCGATCAGTTTTACAATAGTTTGTTGTTTA---TTTCAGGTGTGGGCAAAT
droGri2 scaffold_15074:2610978-2611059 - GT------AACGCTCTC--------TTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------TTCTCTCGTTTGTAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CT------CC---TCCA----------GACTTTCCTCCGATAA-CATCACAC------------------------------------------TCAGCTTTATCAAAATT----TTTCGCCCCATCGCCC---AAA--AAAAAAGAATAAATTGGGGGTTGATGTGCGGACA----AGTCCGATAAGATAAAC-CCCCAGAGTAACCGGTTTTATGT--ATAG---------------------CCCTCATGCATATTTACATACTAAATTTGT-GGTATT--------------------------------------------------------------------------------CTCT--------------------------TTTTATACTCCGTAGCGATTATCTCTTTAAACTGTTGCTGATTGGAGATTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGATTGGAGATTCGGG...........2111.001100000
......................................................................................................................................................................GCGGACA----AGTCCGATAAGATAAAC-CC....................................................................................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTGTTGCTGATTGGA...................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATTCGGGCGTTGGAAAGT2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGATTGGAGATTCGGGC..........2211.001001000
............................................CATCACAC------------------------------------------TCAGCTTTATCGT..............................................................................................................................................................................................................................................................................................................................................................2111.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTCGGGCGTTGGAA...1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATTCGGGCGTTGGAAA..2011.001100000
.................................................................................................................................................................GATGTGCGGACA----AGTCCGATAAGATAAA........................................................................................................................................................................................................................................................................2811.001000001
droBip1
CT------------CCA----------GACTTTCCTCCGATCA-CATCACAC------------------------------------------GCAACTTTATCAAG-TA----CTTCGCCCCATCAGCCACCAAAATAAAAAAGAATAAATTGGGGGTTGATGTGCGGACA----AGTCCGATAAGATAAAC-CCCCAGAGTAACCGGTTTTATGT--ATAG---------------------CCCTCATGCATATTTACATACTAATTGTGT-GGTGTT--------------------------------------------------------------------------------CTCT--------------------------CTCTATGCTCCACAGCGATTATCTCTTTAAACTGTTGCTGATTGGCGATTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------------------------------------------------------------------------------------------------------------------------------AAATTGGGGGTTGATGT-TGGTCAT-ATACATCGATAAGATAAAG-CCTCGTAGAAACCGGTTTTATTTGAATA--------------------------------TATTCACAGACTAACCAAAG-TG-------------------------------------------------------------------------------------TAT--------------------------CCTCCTATTTCACAGCGATTATCTCTTTAAACTGCTGCTTATTGGAGATTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droFic1
CG-----------TCTA--------GAAAGTCTCCTCAAATCGCCAGCATT----------------------------------TAGCAGACTGTAACATTATCAA---------------ACA---ACC----------------AGAATTGGGGGGTTGATGT-TGGACAC---AACGCGATAAGATAAAGGCCTCGCGCAAACTGGTTTTATGC--ATA----------------------------------TTCAGAGACTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTSizeHit CountTotal NormTotal
No Reads
droEle1
TTGATTTGCAAAGTCCA--------GAAAGTCTCTTCCAATCGCCAGCATATATA----------------T--GTA--TGTACATAGGTTATTGTAACATTATCAT---------------ACATCACCC----------------AGAAATTGGGGGTTGATGT-TGGACAT---AACGCGATAAGATAAAG-CCTCGCGCAAACCGGTTTTATGC--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTGATTCGCATAATCCT--------GGAAGTCTTCT--------------ATATG------------------------TATACATAGGTTATTGTAACATTATCAC---------------ATATCACCC----------------AAAAATTGGGGGTTGATGT-TCGAGCT---AACACGATAAGATAAAG-CCTCGCGCAAACCGGTTTTATGC--TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CG------CACAGTCTA--------GAAACTATCCTTCTATC-----------TG------------------------TAAC--CAAATGATTATAGCACTATCAC---------------ACATCACCC----------------AGAAATTGGGGGTTGATGT-TGGACAT---GGCACGATAAGATAAAG-CCCATAGCAAACCGGTTCTGTGA--AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CG------CACCGTCTA--------GAAACTCTCCTTCTATA---------------------------------------AG--TATGAGATTGTAACATTATCAC---------------ATATCGCTT----------------GGAAATTGGGGGTTGATGT-TGGACAT---CGTGCGATAAGATAAAG-CCTGTAGTAAACCGGTTTTATGA--ATA----TATTACTTTCT--------------------GTAGAGACTAAACTATGCCCTCTTTCCGGGTACTCAAAAGTATCTCCTAAAAACTATCTCGAATCTACTTCCTCCCAAGTCACAACTTAAATACTGAACTTTGTATCTATCTATATATCTCAACTGACCAATTATCTCCTTTTCCCCAGTGACTATCTCTTCAAACTGCTGCTCATCGGAGACTCGGGCGTTGGAAAGTSizeHit CountTotal NormTotal
No Reads
droEug1
CG------TAAAGTTTG--------GAAACTCTCCTCCAAAAGCCAGCATATGTA----------------AA-ATATATATG--TAGAAGATTTTAACATTATCAC---------------ACATCATTC----------------AAAAATTGGGGGTTGATGT-CGGACAT---AACGCGATAAGATAAAG-TCTAAAGCAAACCGGTTTTATGC--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CG------CACTCTCCA--------GAAAGCCTCCTTCAATAGCCAGCATACATG------------------------TGTG--CAGAGGATTGGAACACTATCGC---------------ATATCATTC----------------AGCAATTGGGGGTTGATGT-TGGACAT---AGCATGATAAGATAAAG-CCTAAACCAAACCGGTTTTATGT--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................ATTC----------------AGCAATTGGGGGTTGATG....................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000
...................................................................................................................................................AGCAATTGGGGGTTGATG....................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000010000000000000000
..................................................................................................................................................................ATGT-TGGACAT---AGCATGATAAG.............................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
....................................................ATG------------------------TGTG--CAGAGGATTGG.........................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000
......................................................................................................................................................AATTGGGGGTTGATGT-TG................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................TG------------------------TGTG--CAGAGGATTGGAA.......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ATTGGGGGTTGATGT-TGGAA.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGTG--CAGAGGATTGGAACACTATCGC---------------A..............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................AGCAATTGGGGGTTGATGT-TGGA..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................GCAATTGGGGGTTGATGT-TGGACAT---AG......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................TACATG------------------------TGTG--CAGAGGATTGGAA.......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................GACAT---AGCATGATAAGATAAAG-CC....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
....................................TCAATAGCCAGCATACATG------------------------TGTG--CAGA................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AATTGGGGGTTGATGT-TGGACAT---AGCA....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................AGCATACATG------------------------TGTG--CAGAGGA.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............................GCCTCCTTCAATAGCCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................G------------------------TGTG--CAGAGGATTGGAA.......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................GTTGATGT-TGGACAT---AGCA....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................TTC----------------AGCAATTGGGGGTTGATG....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................ATTC----------------AGCAATTGGGGGTTGA......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................ATTGGGGGTTGATGT-TGG...............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................TAGCCAGCATACATG------------------------TGTG--CAGAGGA.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CATG------------------------TGTG--CAGAGGATTGGAAA......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATGT-TGGACAT---AGCATGATA...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTC----------------AGCAATTGGGGGTTGATGT-TGG...............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................TG--CAGAGGATTGGAACACTAA.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................GCAATTGGGGGTTGATGT-TGG...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ATG------------------------TGTG--CAGAGGATTGGA........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................TG--CAGAGGATTGGAACACTATCG...............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......................................................................................................................................................ATTGGGGGTTGATGT-TGGACAT---AGCA....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................TATCATTC----------------AGCAATTGGGGGTTGA......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AGAGGATTGGAACACTATCGC---------------...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................G------------------------TGTG--CAGAGGATTGGAACACTATCG...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................ATTGGGGGTTGATGT-TGGACAT---AG......................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................TGT-TGGACAT---AGCATGATAA..............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................TTGGGGGTTGATGT-TGGAC.............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................GTG--CAGAGGATTGGAACACTAT.................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................TTGGGGGTTGATGT-TGGA..............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................................................................................TAAAG-CCTAAACCAAACCGGTTTTATG................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CA------CACTCTCCA--------GAAAGCCTTCTCCAATCGCCAGCATACATG------------------------TGTG--CAGAGGATTGGAACACTATCGC---------------ACATCACTC----------------AACAATTGGGGGTTGATGT-TGGACAT---AGCATGATAAGATAAAG-CCTACACCAAACCGGTTTTATGT--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................ATACATG------------------------TGTG--CAGAGGATTGGAACA.....................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000002000
......................................................................................AGAGGATTGGAACACTATC................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
CA------CACTCTCCA--------GAAAGCCTTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
................................................................................................................................CTC----------------AACAATTGGGGGTTGA......................................................................................................................................................................................................................................................................................................1911.00100000000000100000
........................................................................................................................................................TTGGGGGTTGATGT-TGG...............................................................................................................................................................................................................................................................................................1711.00100000000001000000
.................................................................................TG--CAGAGGATTGGAACACTA..................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
droSec2
CT----------CTCCA--------GAAAGCCTCCTCCAATCGCCAGCATACATG------------------------TGTG--CAGAGGATTGGAACACTATCGC---------------ACATCACTC----------------AACAATTGGGGGTTGATGT-TGGACAT---AGCATGATAAGATAAAG-CCTAAACCAAACCGGTTTTATGT--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................AATTGGGGGTTGATGT-TGGA..............................................................................................................................................................................................................................................................................................2011.0010010
droYak3
CG------CACTCTCTA--------GAAAGCCTCCTCCAATCGTCAGCATACATA------------------------TGTG--CGGAGGATTGAAACACCGTCGC---------------ACATCACTC----------------AGCAATTGGGGGTTGATGT-TGGACAT---AGCACGATAAGATAAAG-TCTAAACCAAACCGGTTCTATGC--ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTGGCTCGCACTCTTTA--------GAAAGGCTCCTCCAAACG-CAGCATACATA------------------------TGTG--CAGAGTATTAAAACACTATCGC---------------ACATCACCC----------------AGCAATTGGGGGTTGATGT-TGGACAT---AGTACGATAAGATAAAG-CCTAAACCAAACCGGTTTTATGC--AAACACATATTAGTATCT--------------------TAACCTACTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
TG------TCTCC---TGAGCTATGGAATCTCTGGTCCTATCA-CTGCAT-CGCGAGTGACGAGTTACGAGATA-------TT--TAGATG--TTTAGCTTTATCAAAATTCTCAT---------TTGGTT----------------TTTAATTGGGGGTTGATGT-TGGGTACCCTATATCGATAAGATAACT---CAGACTTAA-----TATATGT--ACACACACTGTGGCGTTTTGTGATACCCTCATGAATATTAAG---------------------------------------------------------------------------------------------ACTTTGCATAT--------------------------TCTTCACTTCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGAGATTCCGGCGTTGGAAAGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTGGA....2213.0030300000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATTCCGGCGTTGGA....1813.0030300000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATT...............2312.0020110000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTG......2012.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATTGGAGATTCCGGCGTTGG.....2512.0020000000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTGG.....2112.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATTGGAGATTCCGGCGT........2212.0020000000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGT...................1912.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTGG....................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGCTGATTGGAGATTCCGGCGTTG......2811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGATTCCGGCGTTGGA....2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTGGAGATTC..............2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTTG......2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATTCCGG...........2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTTGGAAAG.2811.0011000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGAGATTCCGGCGTTGGAA...2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATTCCGGC..........2811.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTT.......2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTGGA...................2211.0010100000000
...................................................................................................................................................................................ATCGATAAGATAACT---CAGACTTA............................................................................................................................................................................................................................................................2311.0010001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAAACTGTTGCTGATTGGA...................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTTCAAACTGTTGCTGATTG.....................2411.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGATTGGAGATTCCGGCGTT.......2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGATTCCGGCGTTGGA....1911.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGCTGATTGGAGATTCCGGC..........2411.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTATCTCTTCAAACTGTTGCT..........................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGCTGATTGGAGATTCCGGC..........2711.0010000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGCGTTGGA....2511.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGGAGATTCCGGC..........1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGCTGATTGGAGA.................2011.0010100000000
...................GCTATGGAATCTCTGGTCCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGAGATTC..............2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATTGGAGATTCCG............1811.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAACTGTTGCTGATTGG....................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGCTGATTGGAG..................1911.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATCTCTTCAAACTGTTGCTG.........................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGG....................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCAAACTGTTGCTGATTGG....................2311.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTTGCTGATTGGAGATT...............2011.0010000000001
.................GAGCTATGGAATCTCTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TG------TCTCC---TGAGCTATGGAATCTCTGGTCCTATCA-CTGCAT-CGCGAGTGACGAGTTACGAGATA-------TT--TAGATG--TTTAGCTTTATCAAAATGCTCAT---------TTGGTT----------------TTTAATTGGGGGTTGATGT-TGGGTACCCTACATCGATAAGATAACT---CAGACTTAA-----TATATGT--ACACACACTGTGGCGTTTTGTGATACCCTCATGAATATTAAG---------------------------------------------------------------------------------------------ACTTTGCATAT--------------------------TCTTCACTTCTACAGCGATTATCTCTTCAAACTGTTGCTGATTGGTGATTCCGGCGTTGGAAAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGCTGATTGGT...................1812.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAACTGTTGCTGATT......................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGTGATTCCGGCGTTG......2011.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAACTGTTGCTGATTG.....................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGCTGATTGGTGATT...............2211.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAACTGTTGCTGATTG.....................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATTCCGGCGTTGGAAA..2011.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGCTGATTGGTGATTCCGGCG.........2811.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTTCAAACTGTTGCTGATT......................2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGGTGATTCCGGC..........1911.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATTCCGGCGTTGGA....1911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGTTGCTGATTGGTGATTCCGGC..........2811.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCAAACTGTTGCTGATT......................2111.001001000
droWil2
TA------TTCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT--------------------------TTTTACACTTTTCAGCGATTATCTATTCAAATTGCTGTTGATCGGTGACTCTGGAGTTGGAAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGA..........1913.00300300
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTGTTGATCGGTGACTCTGGA..........2513.00300201
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGCTGTTGATCGGT...................1913.00300120
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATCTATTCAAATTGCTGTTGATCGGT...................2712.00201010
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTGTTGATCGGTGA.................1812.00200020
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAGTTGGAAA..2712.00200200
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAGTTGGAA...2612.00200200
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTGATCGGTGACTCTGGA..........2312.00200200
........................................................................................................................................................................................................................................................................................................................................................................................................................GATTATCTATTCAAATTGCTGTTGATC......................2712.00220000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGATCGGTGACTCTGGA..........2012.00200110
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAAATTGCTGTTGATCGGT...................2211.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAATTGCTGTTGATCGGTGACT...............2411.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCTGTTGATCGGTGACT...............2111.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGACTCTGGAGTTGGA....1911.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGCTGTTGATCGGTGA.................2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAATTGCTGTTGATCGGT...................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATTCAAATTGCTGTTGATCGGT...................2611.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGATCGGTGACTCTGGAGTT.......2511.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAGT........2111.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGTGACTCTGGAG.........2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTGTTGATCGGTGACTCTG............2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGACTCTGGAGTTGGAA...2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGTTGATCGGTGACT...............1911.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTGATCGGTGACTC..............1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATCTATTCAAATTGCTGTTG.........................2111.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................TATTCAAATTGCTGTTGATCGGT...................2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................GATTATCTATTCAAATTGCTGTT..........................2311.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGATCGGTGACTCTGGA..........2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGGTGACTCTGGAGTTG......2011.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAATTGCTGTTGATCGGT...................2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTGATCGGTGACTCTGGAGTTG......2711.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGCTGTTGATCGGTGACTCTGGA..........2811.00100100
droVir3
CA------CATTTGTTC--------TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--------------------------------------------------------------------------------TTTT--------------------------TTTTGTGTTTTACAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGCTGTTGATCGGGA..................2014.004000000000001000000000000000000000000000000000000000000000000030
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGC..........1914.004000000010000000000001000000000000001000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGCTGTTGATCGGC...................1913.003001100000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGTTGATCGGCGACTCTGGC..........2713.003000000000000000000000000000000000000000000000000000000000000003
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGC...................2013.003002100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGTTGATCGGCGACTCTGGCGT........2612.002000000000000000000000000000000000000000000000000000000000000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGTTGATCGGGA..................1912.002000000000000100010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCGGCGACTCTGGC..........1812.002001000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGATCGGCGACTCTGGC..........2011.001000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAAACTGCTGTTGATCGGC...................2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGATCGGCGACTCTGGCGTC.......2411.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGATCGGCGACTCTGGCGTTGG.....2711.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGACTCTGGCGTT.......2811.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGTTGATCGGC...................1811.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTGATCGGCGACTCTGGC..........2311.001000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAACTGCTGTTGATCGGGA..................2111.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCGT........2111.001000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGTTGATCGGG...................1811.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAACTGCTGTTGATCGGC...................2111.001000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGAC................1911.001000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGCTGTTGATCGGCGACTCTGGCG.........2711.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGATCGGCGACTCTGGCGTTGGA....2611.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGATTATCTTTTCAAACTGCTGTT..........................2411.001000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACTGCTGTTGATCGGCGACTCT.............2511.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGTTGATCGGGC..................1920.501000000001000000000000000000000000000000000000000000000000000000
............TGTTC--------TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--------------------------------------------------------------------------------TTTT--------------------------TT...............................................................20200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
AT------------------------------------------------ACATA------------------------TGTG--CATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACATATC-TG-------------------------------------------------------------------------------------------------------------------TATGCTCTTTCAATCGATCAGTTTTACAATAGTTTGTTGTTTA---TTTCAGGTGTGGGCAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GT------AACGCTCTC--------TTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------TTCTCTCGTTTGTAGCGATTATCTTTTCAAACTGCTGTTGATCGGCGACTCTGGCGTTGGAAAGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCG.........2011.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGTTGATCGGCGACTCTG............2311.00110
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCGGCGACTCTGGCGTTG......2311.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCAAACTGCTGTTG.........................1811.00110

Generated: 05/18/2015 at 05:44 AM