ID:

dan_2885

 Coordinate:

scaffold_13340:3701302-3701452 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.6 -36.6 -36.6

Flybase annnotation

CDS [Dana\GF17698-cds]; exon [dana_GLEANR_18960:1]; intron [Dana\GF17698-in]; Antisense to intron [Dana\GF17266-in]

Repeatable elements

NameClassFamilyStrand
R1_DYaLINER1-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGACCAGCAATTCGAGCTGGCAATGGAAAACTTTTCAAACATCCATTCCAGTCAGCAGCAACATGCTTCCATGAACGATAGATTGCGCGACTTGCGGATACAGCAGGATCCGGGCTTCAGGGCTCAGGTGCAGCAACAGGAGCAGTTGCAAGAGGCGCACGCCCATGAGCGACGGCAACAAGAAGAGCAACAGCAACAGCAGCAGCAGGGGCAGAATCTAGGGCCATCAGCTCAGGAATCAAGCTTTCAAG
**************************************************...((((......))))...............((((....(((((.......)))))..(((.((((..((((....((((.(((((.......))))).....))))..))))..))))..)))...........))))..((....)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M044
female body
 V105
male body		 M058
embryo
 V106
head
.............................................................................................................CCGGGCTTAAGGGCTCGGGT.......................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
.........................................TCCATTCCAGTCAGCAGCAACATGCT........................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
...................................................................................TGCGCGACTTGCGGATACAGCAGGA............................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
............................................................................................................................................................................................AACAGCAACAGCAGCAGCAGG.......................................... 21 0 2 0.50 1 0 0 0 0 1
...................................................................................................................................................GCAAGAGGGGCGCACCCATGA................................................................................... 21 3 3 0.33 1 0 0 0 1 0
............................................................................................................................................................................................................................GGCCCATTAGCTCAGTAATC........... 20 3 3 0.33 1 0 1 0 0 0
..................................................................................................TACGGCGGGATCCGGGCT....................................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0
......................................................................................................................................AACAGGAGCAATTGGAAGA.................................................................................................. 19 2 4 0.25 1 0 0 0 1 0
.......................................................CAGCAACCTGCTCCCATG.................................................................................................................................................................................. 18 2 6 0.17 1 1 0 0 0 0
......................................................................................................................................................AGAGGCGCACGACCAATAG.................................................................................. 19 3 11 0.09 1 1 0 0 0 0
....................................................................................................................................................................................AGAAGAGAAACCGCAACAG.................................................... 19 2 17 0.06 1 1 0 0 0 0
..................................................................................................................................CAGCAAAAAGAGCAGTTG....................................................................................................... 18 2 18 0.06 1 0 1 0 0 0
..........................................................................................................................................................................................................................TAAGGCCATCAGGTCATGA.............. 19 3 20 0.05 1 1 0 0 0 0
......................................................................ATGAACGTTAGTTTGCGA................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................GCAACAGCAACAGCAGCAGC............................................. 20 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

CCTGGTCGTTAAGCTCGACCGTTACCTTTTGAAAAGTTTGTAGGTAAGGTCAGTCGTCGTTGTACGAAGGTACTTGCTATCTAACGCGCTGAACGCCTATGTCGTCCTAGGCCCGAAGTCCCGAGTCCACGTCGTTGTCCTCGTCAACGTTCTCCGCGTGCGGGTACTCGCTGCCGTTGTTCTTCTCGTTGTCGTTGTCGTCGTCGTCCCCGTCTTAGATCCCGGTAGTCGAGTCCTTAGTTCGAAAGTTC
**************************************************...((((......))))...............((((....(((((.......)))))..(((.((((..((((....((((.(((((.......))))).....))))..))))..))))..)))...........))))..((....)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V055
head
 V105
male body		 M058
embryo
 V106
head
 V039
embryo
................................................................................................................................................................................TTGTTCTTCTCGTTGTCGTTGTCGTCGT............................................... 28 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GTCGTCGTCCCCGTCTAAGAAT.............................. 22 3 1 1.00 1 1 0 0 0 0 0
................................................................................................ATATGTCGTGCTGGGCCCGA....................................................................................................................................... 20 3 2 0.50 1 0 1 0 0 0 0
.....................................GTGTAGGTAAGGTGAGTCG................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0
......................................TGTAGGAAAGGCCAGTCGTCGG............................................................................................................................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0
........................................................................................................TGCTAGGCCAGAAGTCCC................................................................................................................................. 18 2 3 0.33 1 0 1 0 0 0 0
...............................AAAAGTTGGTAAGTAAGGT......................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0
......................................TGTAGGAAAGGTGAGTCG................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0 0 0
..............................................AGGTCAGTCGTCCTTGTGGG......................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0
........................................................................................................................................................TCCGCGAGAGGGTACTCG................................................................................. 18 2 8 0.13 1 0 0 0 0 1 0
..TGGTCGTTCAGCGTGACCGT..................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0 0
................................................GTCTGTCTTCGCTGTACGAA....................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 1
..............................................................................................................................................................................................................................CGGTTGTCGAGTCCCTCGTT......... 20 3 15 0.07 1 0 0 0 0 1 0
..................................................................................................................................................................................GTTCTCCTAGTTGTCTTTGTCG................................................... 22 3 20 0.05 1 0 0 0 0 0 1
............................................................................................................................GTCCACGTCGTTGTCCTTGCG.......................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0
.................................GAGTTTGTAGGTCAGGT......................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:3701252-3701502 + dan_2885 GG---------------------------------------------ACCAGCAATTC---G-AGCTGG-----------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGAAAACTTTTCAAACATCCATTCCAGTCAGCAGCAACATGCTTCCATGAACGATAGATTGCGCGACTTG-----CGGATACAGCAGGATCCGGG------------CTTCAGGGCTCAGG--TG-----------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------GCAA-----CAGGAGCA---GTTGCAAGAGGCGCACGCCCATGAGCGA---CGGC---------AA---CAA------------GAA---GA------------GC------AACAG------C---AACA-------GCAGCAGCA---------------------------------G---GGGCAGAATCTAGGGCCA---TCAGCTCAGG-------------------------AATCA-AG------CTTTCAAG
droBip1 scf7180000396712:651963-652182 - GA---------------------------------------------ATCGGCAGTTG---G-AGCTGC-----------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCAGAACTT---------CCATGCTAGGCAGCAGCAACAGTCTCCCACGAACCAGATACTGCGCGACTTG-----CGAATTCATCAAAATCCGGGTTACATC--------------------------------------------------------CGGGCTCA---ACTGGA---------------------------------------------------------------------------------------------------------------------------------GCAA-----CAGGAGCA---GCTGGAACAACCA---------------------C------GCATC------------------CAG---GAGCAACAGCGGCA---------GCAG------TTATAT-------------------------------------------------------CG---------GGGGCCACCACCAGTACAAG-------------------------AAACA-AG------GT-ACCAA
droKik1 scf7180000302388:1356855-1357018 - AT---------------------AGG---------------------TGCAGCGATCC-----------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCAACCGCA------------------------------------GGATGTTC-----------------------------------------------------------------------------------------------------------------------------------AGC--AT------------------C-----A----GCAACAGCAGCA---GCAACAGCAGCAACAGCAGCAACA--------------------------------------------------------------------------------------------------------------------------------GCAA------CA------------------------------------G------------------CAA---CA------------GC------AACAG------C---ATCA-------GCATCAGCA---------------------------------G---CAGCA------GCA---T-------CCAAGCCAGCTTGGATGTGGCCCTGTTCAGAAGGC-----------ACCCGAA
droFic1 scf7180000454072:3145378-3145573 - CA---------------------GCA-------------------------ACAAATGTT-CCAGCAG---CAGATTGCTGCCATCCA--------------GATGCAGCAGCAG--GCGGCAGCCCAG-----------------------------------------------------------------------------------------------------------GCC------CAACAGCAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCA-----------AGTGACCCAGCAGCAGCA------G--CAGCAA-GTGAACGCCCA---G---CA------------------------GCAGCAACAGGCG---------------------------------------------------------------------------------------------CAACAACA--------GCAA------------------------------------C---------------AGCA---A---AGG---GA------------GC------AGCAG------C---AGCA-------GCAGCA---------------------------------------------------ACAGCAA---GTA-----------------------------------------------GCCCAGG
droEle1 scf7180000491023:172373-172563 + AA---------------------ACA------------------------TCAAATTA---A-ATC------AA--TGCCTCTATCCAAATGGAATGCAGCCAATTGAGAATCAA--GCTGCCTTTAAGGATG---------------------------------------------------------------------------------AGGA---G-----------------------GATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGATGAGCA-----------ACACAT------TTTGCAGCAGGCACA-----A-CTGCAGCAGCA---ACAGCA------------------------GCAGCAACAGCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAA---------------------CAGCAG------------------------------------------------------CA---------ACAG------ATGCATCA-------------GGT---------------------------TAAGCAG---C-----------------------------------------------------------------------AACAGG
droRho1 scf7180000779334:988950-989184 - GC---------------------------------------------AGCAGCAGTTG---C-AGCAT-----C------------------------AGC------AGCAA---------------------CAG----------------------------------CAACCG---TC----GCCCATGTTGGGCAG------A-----------CCGG------CAGCAGCAACA--------------------C---------------------------CCACA------------------------------------------------------------------------GATATGCAGCGATATGTGCAACGGATACAGCAGAATTATCAGCACCTACAGCAACA---TCAGCAGC--AACAGCA---------------GCA-----G-CAACAGCAGCA---ACATCAGCAGCAACAGCAG---------------------------------------------------------------------------------------------------------------------CA---GCA--------GCAA------------------------------------C---------------AGCA---GCAGCAG---CA---------------------G---------C---AACAG----CAGCAG---CA------------------------------------------------ACAG-------CA-----------------------------------------G---CACAACAGC
droBia1 scf7180000301754:1409720-1409854 + CA---------------------GG--CCCTG---------------GGCAGCAACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAG--AG------------------C-----A----GCACCAGCAGCA---GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAACAGCAG---------------------------------------------------------------------------------------------CA---TTA--------GCAA------------------------------------C---------------AGCA---G---------------------CA---------GCAG------T---CGCA----------C------------------------------------------CA---------GCG---A----------------------------------------CC-AGCCG---ACCCACAGC
droTak1 scf7180000414106:7143-7332 + CA---------------------GCA-------------------------GCAACAT-----------------------------------------------------------------------------------------------------------------------------------------------------CTCCAGC------------------AG-----CAGCAGCAACACCA------------------------------------GCAGCAACAGCAGCAGCAACACTGGGACTA---------CTATGCCAG--------------------------------------------------------------------------------------------G--------------------------------------CAGCAGCA---G---------CAA------------------------CATCA---------------------------------------------------------------------------------------------GCAG-----CAGCAGCA---ACAGCAACAGCCA-ACGGCCGCCACCAA---CGGC---------AA---CAG---CAACAG---CAA---CA------------------------G------C---AACA-------GCAGCAACAGTAACA---------------------------A---CA---------CTACGGT-------CC---------------------------------------------CAGCTC
droEug1 scf7180000409555:694144-694372 + ATCGATTACTCGGCACCGCTGCAGCA-------------------------GCAAATT---A-ATCC--GG---------------------------AC-------------------------------------------------TTGATTGGGGCTCATCCGCAT-------------------------------------GCCCAGC------------------AG-----CATCAGCAGCAGGT------------------------------------GCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CAGCAGCAGCA---ACCACA------------------------ACAACAGCAGCAA---------------------------------------------------------------------------------------------CAGCA-----------ACAG---------------------CAGCAGCAGCAGATACAACAGAAA---C---------------AGTCACA------------AC------AACAG------C---A----------GCAG---CA------------------------------G---CAGCAGCA------ACATCAG-------CC---------TGCGGTTAGCTCTTTTCAGAGGGCC-AA------CTTCCCAG
dm3 chrX:8949707-8949878 - AA---------------------------------------------AGCAGCAGGCG---A-AAGA--GG---------------------------A------GCAGCAGCAG---CAA------------C----------------------------------AGCA---TCCAGA----------------------------------------------GTTGCAG-----CAACAGCAACAGCA------------------------------------GCAGCAACAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CAGCAACAGCA---A---------------------------------------------------------------------------------------------------------------------------------------CAGCA-----------ACAG---------------------CAACAGCAACAGCAACAGCAACAG------------------CAA---CA------------GC------AACAACAGCAGC---AACA-------GCAG------------------------------------------CA---------ACAGCAA-------CTCAAG----------------------------------------CAAC-AA
droSim2 3r:25281697-25281844 + GT---------------------GCA-------------------------ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG------CTGCAG-----------CAACA---------T---------------------------CAGCAG----AGTGGCAACGAGTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCAGC--AGGAGTT---------------GCA-----G-TTGCAGGAGGA---ACAGCAGCAGCGTCAGCAG---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGCA-------GCAGCAACA---------------------------------G---CA---------G------------------------------------------------------------------
droSec2 scaffold_2:155353-155483 + TT---------------------GCG-------------------------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---G-----------------------CATCA------------------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------GGCTACCAGACGCAGC--AA-----------------------CAGCAA-CAACAGCCGCA---------------------------------------------------------------------------------------------------------------------------------------------G-----CAGCA---GCAGCAGC---------------AACAACAA---CCGC---------AG---CA---------G---CAG---GA------------GC------AACCG------C---AGCA-------GCAGCAACA---------------------------------G---CT---------ACAGAAT-------CC---------------------------------------------TGCGCC
droYak3 X:15031227-15031349 + AG---------------------------------------------AACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------A---GCTG-----------------------GACCA------------------------------------------------------------GATG-----------------------------------------------------------------------------------------------------GCCCAGGAATCGGAGC--AGGAGCA---------------GCA-----G-GCTCAGGCGCA---ACAGCAACAGCAGCAGCAA---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGCAGCAGCAACAG---C---A----------GCAG---CA------------------------------------------------GCA-----------------------------------------------------------TCAGC
droEre2 scaffold_4784:3531498-3531626 + CA---------------------GCA-------------------------GCAACAT-----------------------------------------------------------------------------------------------------------------------------------------------------GGCATGC------------------AG-----CATCAGCAACAGCA------------------------------------GCTGCAGCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CAGAGTGTGCA---G------CAGCAACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GCA---ACA--------GCAA------------------------------------C---------------AGCA---G------------------------CAGCAGCAG---------C---AACAC----CAGCAG---CA------------------------------------------------ACA---G----TT-----------------------------------------------GCTCGGC
dp5 2:6797216-6797385 + GC---------------------------------------------AACAGCAACATATGC-AACAG-----------------------------CAAAATATGCAGCAGCAACATCTGC--------AAC---------------------------------------------------------------------------------AGCA---------------A-----------CATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCA-----------ACAGCA------GAAGCA------G--CAGCAA-CAGAAGCAGCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCAGCAACAACAGAAG------------------CAG---CA------------------------G------C---AACA-------GCAGCAGCA---------------------------GAAG---CAGC-----------------------------------------------------------------------CGCAGC
droPer2 scaffold_5:843938-844178 - GA---------------------GCATGTATGGTCAGGCAATGGGCCAGCAGCAACCA---C-AGCC--AA---------------------------------CGCAGCAGCAA------------------CAAGTGGTTGTGCCACCT-GTGGCGGCCCAGCCGCAACC---GCCAG------------------------------------------------TGGCAACAACA------CAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAC--AACA--------------------------A-GTGCAGCAGCA---G---------------------------------------------------------------------------------------------------------------------------------------CACCA-----------ACAG---------------------CAGCAGCAGCAACAACAACAGCAG---C---------------AG---CA------------AC------AACAACAGCAAC---AACA-------GCAG------------------------------------------CA---------ACAGCAA---T-CGCTCAAT-------------------------GACC-AACTGCAGCATTCCATC
droWil2 scf2_1100000004902:9098921-9099083 - CT---------------------------------------------TGTGACAT---------------------------------------------------------------CAC------------C----------------------------------AGTA---TCCATTGGCT-------------TAAGGGCGC-----------GC-GGAGCAGATGCTG--------------------------------------------------------CG-----------------------------------------------------------------------------------------------------------------------------------CTCGCAGC--AG------------------C-----A----GCACCACCACCA---GCAGCAGCAGCAACAGCAGCAACA--------------------------------------------------------------------------------------------------------------------------------ACAA---------------------------------C------AGCAG------------------CAA---CAGCAACAG---CAGCAGCAGCAG---------C---AGGCG----GCGCAG------------------------------------------CA---------ACT---G----------------------------------------GC-----------ATCCGCT
droVir3 scaffold_12928:1312709-1312928 + GG---------------------------------------------CGCAGCAACAG---C-TGGC--GGCAC------------------------AGC------AGCAA---------------------CAGTTGGCC--------------------------------------------------------GT------A-----------GCGG------CAGCTGCGGCA---CATCAACAGCAGCAACAGCAGCAGGCCGCCGCCGCTGTAGTTGTCCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGCA---ACAGCA------------------------GCAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGCAG---CAGC------AGGTGCAGCAGCAACA---GCAGCAG---CA---------------------G---------C---AACAGGCGGCAGCAG---CA---------------------------------GCAGC----------------------T---------------------------------------G------CTGTCAAG
droMoj3 scaffold_6359:888342-888607 - GC---------------------GGGAGCAGG---------------AGCAGCAGTTG---A-AGCG--GG---------------------------AGC------AGCAA---------------------CAG-------------------------------------------------------------------------------------------------------------CAACT---------------------------------------------AC-----------------------------------------------------------------------------------------------------------------------------------AGC--AG------------------C-----A----GCAACTACATCA---GCAACTGCAGCAACAGCAACTACA---------------GCAGCAGTTGCGGGAGCAGGAGCAGCAGTTGCTGCGGGAGCAGGAGCAGCAGTTGCTGCGGGAGCAGGAGCAGCAGTTGCTGCGGGAGCAGGAGCAGCAA-----------------------------------------CAGCAGCAGTTGCAGCGGGAG---C---------------AG---------------------------GAG----------------------CAGCAACAGCAACTACAGCAGCAGTTGCAGCGGGAGCAGGAG--------------------------------------------------------------------------CAGCAAG
droGri2 scaffold_15500:1355-1553 - AACACA-----------------CG--CTCTGGTCAG---------CAGCAGCAGCAGCGGC-AGCAG-----------------------------CAGCAGCGGCAGCAGCAGCAGCGGC--------AGC---------------------------------------------------------------------------------AGCA---------------G-----------CAGCAGCA------------------------------------GCG-----------------------------------------------------------------------------------------------------------------------GCAGCAGCA---GCAGCAGC--AGCAGCA---------------GCA-----G-CGGCAGCAGCA---GCAGCA------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------CAGCAG---CAGC------AGCGGCAGCAGCAGCA---GCAGCAG---CA---------------------G---------C---AGCAG-CGGCAGCAGCAGCA---------------------------GCGGCAG--------------------------------------------------------------------------CAGCAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GG---------------------------------------------ACCAGCAATTC---G-AGCTGG-----------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGGAAAACTTTTCAAACATCCATTCCAGTCAGCAGCAACATGCTTCCATGAACGATAGATTGCGCGACTTG-----CGGATACAGCAGGATCCGGG------------CTTCAGGGCTCAGG--TG-----------------------CA----------------------------------------------------------------------------------------------------------------------------------------------------------GCAA-----CAGGAGCA---GTTGCAAGAGGCGCACGCCCATGAGCGA---CGGC---------AA---CAA------------GAA---GA------------GC------AACAG------C---AACA-------GCAGCAGCA---------------------------------G---GGGCAGAATCTAGGGCCA---TCAGCTCAGG-------------------------AATCA-AG------CTTTCAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................TCCATTCCAGTCAGCAGCAACATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................TGCGCGACTTG-----CGGATACAGCAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------C---AACA-------GCAGCAGCA---------------------------------G---G.............................................................................2120.501000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AACAG------C---AACA-------GCAGCAGC....................................................................................................................20200.051010000
droBip1
GA---------------------------------------------ATCGGCAGTTG---G-AGCTGC-----------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCAGAACTT---------CCATGCTAGGCAGCAGCAACAGTCTCCCACGAACCAGATACTGCGCGACTTG-----CGAATTCATCAAAATCCGGGTTACATC--------------------------------------------------------CGGGCTCA---ACTGGA---------------------------------------------------------------------------------------------------------------------------------GCAA-----CAGGAGCA---GCTGGAACAACCA---------------------C------GCATC------------------CAG---GAGCAACAGCGGCA---------GCAG------TTATAT-------------------------------------------------------CG---------GGGGCCACCACCAGTACAAG-------------------------AAACA-AG------GT-ACCAASizeHit CountTotal NormTotal
No Reads
droKik1
AT---------------------AGG---------------------TGCAGCGATCC-----------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCAACCGCA------------------------------------GGATGTTC-----------------------------------------------------------------------------------------------------------------------------------AGC--AT------------------C-----A----GCAACAGCAGCA---GCAACAGCAGCAACAGCAGCAACA--------------------------------------------------------------------------------------------------------------------------------GCAA------CA------------------------------------G------------------CAA---CA------------GC------AACAG------C---ATCA-------GCATCAGCA---------------------------------G---CAGCA------GCA---T-------CCAAGCCAGCTTGGATGTGGCCCTGTTCAGAAGGC-----------ACCCGAASizeHit CountTotal NormTotal
No Reads
droFic1
CA---------------------GCA-------------------------ACAAATGTT-CCAGCAG---CAGATTGCTGCCATCCA--------------GATGCAGCAGCAG--GCGGCAGCCCAG-----------------------------------------------------------------------------------------------------------GCC------CAACAGCAGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCA-----------AGTGACCCAGCAGCAGCA------G--CAGCAA-GTGAACGCCCA---G---CA------------------------GCAGCAACAGGCG---------------------------------------------------------------------------------------------CAACAACA--------GCAA------------------------------------C---------------AGCA---A---AGG---GA------------GC------AGCAG------C---AGCA-------GCAGCA---------------------------------------------------ACAGCAA---GTA-----------------------------------------------GCCCAGGSizeHit CountTotal NormTotal
No Reads
droEle1
AA---------------------ACA------------------------TCAAATTA---A-ATC------AA--TGCCTCTATCCAAATGGAATGCAGCCAATTGAGAATCAA--GCTGCCTTTAAGGATG---------------------------------------------------------------------------------AGGA---G-----------------------GATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGATGAGCA-----------ACACAT------TTTGCAGCAGGCACA-----A-CTGCAGCAGCA---ACAGCA------------------------GCAGCAACAGCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAA---------------------CAGCAG------------------------------------------------------CA---------ACAG------ATGCATCA-------------GGT---------------------------TAAGCAG---C-----------------------------------------------------------------------AACAGGSizeHit CountTotal NormTotal
No Reads
droRho1
GC---------------------------------------------AGCAGCAGTTG---C-AGCAT-----C------------------------AGC------AGCAA---------------------CAG----------------------------------CAACCG---TC----GCCCATGTTGGGCAG------A-----------CCGG------CAGCAGCAACA--------------------C---------------------------CCACA------------------------------------------------------------------------GATATGCAGCGATATGTGCAACGGATACAGCAGAATTATCAGCACCTACAGCAACA---TCAGCAGC--AACAGCA---------------GCA-----G-CAACAGCAGCA---ACATCAGCAGCAACAGCAG---------------------------------------------------------------------------------------------------------------------CA---GCA--------GCAA------------------------------------C---------------AGCA---GCAGCAG---CA---------------------G---------C---AACAG----CAGCAG---CA------------------------------------------------ACAG-------CA-----------------------------------------G---CACAACAGCSizeHit CountTotal NormTotal
No Reads
droBia1
CA---------------------GG--CCCTG---------------GGCAGCAACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAG--AG------------------C-----A----GCACCAGCAGCA---GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAACAGCAG---------------------------------------------------------------------------------------------CA---TTA--------GCAA------------------------------------C---------------AGCA---G---------------------CA---------GCAG------T---CGCA----------C------------------------------------------CA---------GCG---A----------------------------------------CC-AGCCG---ACCCACAGCSizeHit CountTotal NormTotal
No Reads
droTak1
CA---------------------GCA-------------------------GCAACAT-----------------------------------------------------------------------------------------------------------------------------------------------------CTCCAGC------------------AG-----CAGCAGCAACACCA------------------------------------GCAGCAACAGCAGCAGCAACACTGGGACTA---------CTATGCCAG--------------------------------------------------------------------------------------------G--------------------------------------CAGCAGCA---G---------CAA------------------------CATCA---------------------------------------------------------------------------------------------GCAG-----CAGCAGCA---ACAGCAACAGCCA-ACGGCCGCCACCAA---CGGC---------AA---CAG---CAACAG---CAA---CA------------------------G------C---AACA-------GCAGCAACAGTAACA---------------------------A---CA---------CTACGGT-------CC---------------------------------------------CAGCTCSizeHit CountTotal NormTotal
No Reads
droEug1
ATCGATTACTCGGCACCGCTGCAGCA-------------------------GCAAATT---A-ATCC--GG---------------------------AC-------------------------------------------------TTGATTGGGGCTCATCCGCAT-------------------------------------GCCCAGC------------------AG-----CATCAGCAGCAGGT------------------------------------GCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CAGCAGCAGCA---ACCACA------------------------ACAACAGCAGCAA---------------------------------------------------------------------------------------------CAGCA-----------ACAG---------------------CAGCAGCAGCAGATACAACAGAAA---C---------------AGTCACA------------AC------AACAG------C---A----------GCAG---CA------------------------------G---CAGCAGCA------ACATCAG-------CC---------TGCGGTTAGCTCTTTTCAGAGGGCC-AA------CTTCCCAGSizeHit CountTotal NormTotal
No Reads
dm3
AA---------------------------------------------AGCAGCAGGCG---A-AAGA--GG---------------------------A------GCAGCAGCAG---CAA------------C----------------------------------AGCA---TCCAGA----------------------------------------------GTTGCAG-----CAACAGCAACAGCA------------------------------------GCAGCAACAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CAGCAACAGCA---A---------------------------------------------------------------------------------------------------------------------------------------CAGCA-----------ACAG---------------------CAACAGCAACAGCAACAGCAACAG------------------CAA---CA------------GC------AACAACAGCAGC---AACA-------GCAG------------------------------------------CA---------ACAGCAA-------CTCAAG----------------------------------------CAAC-AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
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Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGC---AACA-------GCAG------------------------------------------C.............................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droSim2
GT---------------------GCA-------------------------ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG------CTGCAG-----------CAACA---------T---------------------------CAGCAG----AGTGGCAACGAGTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCAGC--AGGAGTT---------------GCA-----G-TTGCAGGAGGA---ACAGCAGCAGCGTCAGCAG---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGCA-------GCAGCAACA---------------------------------G---CA---------G------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................GTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00500500000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGCA-------GC..........................................................................................................................22203.1563000063000000000000
......................................................................................................................................................................................................................................................................................................................TCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCAGC--AGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000002000010000
......................................................................................................................................................................................................................................................................................................................TCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCAGC--AG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000100010000
....................................................................................................................................................................................................................................................................................................................GTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
GT---------------------GCA-------------------------ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG------CTGCAG-----------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
......................................................................................................................................................................................................................................................................................................................TCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
...............................................................................................................................................................................................................................................................................................................AACGAGTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................CAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC--AGGAGTT---------------GCA-----G-TTGCAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020000000000000
....................................................................................................................................................................................................................................................................................................................GTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
........................................................................................................................................................................................................................................AG-----------CAACA---------T---------------------------CAGCAG----AGTGGCAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
....................................................................................................................................................................................................................................................................................................................GTTCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCAGC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGC--AGGAGTT---------------GCA-----G-TTGCAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................CAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................................................................................................................................................................................................................................................................................................................TCAGGACTT---------T----------------------------------------------------------------------------------------CCAGCAGCTGCAGC--AGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.....................................................GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG------CTGCAG-----------CAACA---------T---------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGAGGA---ACAGCAGCAGCGTCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
GT---------------------GCA-------------------------ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG------CTGCAG-----------CAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
GT---------------------GCA-------------------------ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG------CTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..........................................................................................................................................................................................................................GCGG------CTGCAG-----------CAACA---------T---------------------------CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCGTCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................1820.50100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------GCA-----G-TTGCAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGC....................................................................................................................................2770.14100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGC....................................................................................................................................2480.13100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGCA-------GT..........................................................................................................................26100.10100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGCA-------G...........................................................................................................................24100.10100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---AGCA-------............................................................................................................................22120.08100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---.......................................................................................................................................20200.05100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------ACAA---------------------------------------------------------------CAG---CA------------GC------AACAG------C---A......................................................................................................................................19200.05100000000000100000
droSec2
TT---------------------GCG-------------------------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---G-----------------------CATCA------------------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------GGCTACCAGACGCAGC--AA-----------------------CAGCAA-CAACAGCCGCA---------------------------------------------------------------------------------------------------------------------------------------------G-----CAGCA---GCAGCAGC---------------AACAACAA---CCGC---------AG---CA---------G---CAG---GA------------GC------AACCG------C---AGCA-------GCAGCAACA---------------------------------G---CT---------ACAGAAT-------CC---------------------------------------------TGCGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................CATCA------------------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------GGCTACCAGACGCAGC--AA-----------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0022000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CCGC---------AG---CA---------G---CAG---GA------------GC------AACC..................................................................................................................................................2312.0020110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CCGC---------AG---CA---------G---CAG---GA------------GC------AACC..................................................................................................................................................2511.0010010
.............................................................................................................................................................................................................................G-----------------------CATCA------------------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------GGCTACCAGACGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA---CCGC---------AG---CA---------G---CAG---G...........................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CCGC---------AG---CA---------G---CAG---GA------------GC------AACCG------C---.......................................................................................................................................2511.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGACGCAGC--AA-----------------------CAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---G-----------------------CATCA------------------------------------------------------------GCAG-----------------------------------------------------------------------------------------------------GGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA-CAACAGCCGCA---------------------------------------------------------------------------------------------------------------------------------------------G-----.............................................................................................................................................................................................................................................................1820.5010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACCG------C---AGCA-------GCAGCAAC....................................................................................................................1950.2010010
droYak3
AG---------------------------------------------AACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------A---GCTG-----------------------GACCA------------------------------------------------------------GATG-----------------------------------------------------------------------------------------------------GCCCAGGAATCGGAGC--AGGAGCA---------------GCA-----G-GCTCAGGCGCA---ACAGCAACAGCAGCAGCAA---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGCAGCAGCAACAG---C---A----------GCAG---CA------------------------------------------------GCA-----------------------------------------------------------TCAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------C---AGCAG---------------------------------------CAGCAGCAGC...................................................................................................................................................19200.15303000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------CAGCAGCAGCAACAG---C---A----------............................................................................................................................19200.10202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------C---AGCAG---------------------------------------CAGCAGCAGCAAC................................................................................................................................................21200.10202000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGCA........................................................................................................................................................27150.07101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG---C---A----------GCAG---CA------------------------------------------------GCA-----------------------------------------------------------TC...23160.06101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCAACAGCAGCAGCAA---------------------------------------------------------------------------------------------------------------------CA---GCA--------.....................................................................................................................................................................................................................................................25190.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGCAGC......................................................................................................................................................24190.05100010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------C---AGCAG---------------------------------------CAGCAGCAGCA..................................................................................................................................................20200.05100000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ACAGCAACAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---C---A----------GCAG---CA------------------------------------------------GCA-----------------------------------------------------------TCAG.20200.05100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CA...........................................................................................................................................................20200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAGCAACAGCAGCAGCAA---------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................21200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGCAGC......................................................................................................................................................20200.05100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------------------------------------CAGCAGCAGCAACAG---C---A----------GCAG---.....................................................................................................................26200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------------------------------------CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGC.........................................................................................................................................................21200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------------------------------CAGCAGCAGCAACAG---C---A----------GC..........................................................................................................................22200.05100010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAA---------------------------------------------------------------------------------------------------------------------CA---GCA--------.....................................................................................................................................................................................................................................................20200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCA--------ACAA------------------------------------C---AGCAG---------------------------------------CAGCA........................................................................................................................................................20200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------CAGCAGCAGCAACAG---C---A----------GCAG---CA------------------------------------------------...................................................................24200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------C---AGCAG---------------------------------------CAGCAGCAGCAACAG---C---A----------............................................................................................................................24200.05100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------CAGCAGCAGCAACAG---C---A----------GC..........................................................................................................................21200.05100010000000
droEre2
CA---------------------GCA-------------------------GCAACAT-----------------------------------------------------------------------------------------------------------------------------------------------------GGCATGC------------------AG-----CATCAGCAACAGCA------------------------------------GCTGCAGCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CAGAGTGTGCA---G------CAGCAACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GCA---ACA--------GCAA------------------------------------C---------------AGCA---G------------------------CAGCAGCAG---------C---AACAC----CAGCAG---CA------------------------------------------------ACA---G----TT-----------------------------------------------GCTCGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................ATGC------------------AG-----CATCAGCAACAGCA------------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCA---G------CAGCAACAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................2320.5010000010
......................................................................................................................................................................................................................................................................................................AGCTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CAGAGTGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---G------------------------CAGCAGCAG---------C---AACAC----CAGCAG---CA------------------------------------------------...................................................................25100.1010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------GCAA------------------------------------C---------------AGCA---G------------------------CAGCAGC......................................................................................................................................................19200.1022000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GCA---ACA--------GC...................................................................................................................................................................................................................................................22200.1020101000
....................................................................................................................................................................................................................GC------------------AG-----CATCAGCAACAGCA------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.0911000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GCA---................................................................................................................................................................................................................................................................18200.0510000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ACA--------GCAA------------------------------------C---------------AGCA---G------------------------CAGCAGCA.....................................................................................................................................................24200.0510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------GCAA------------------------------------C---------------AGCA---G------------------------CAGCAGCAG---------C---AACA...................................................................................................................................26200.0511000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------GCA---ACA--------GCAA------------------------------------C---------------AGCA---G------------------------CAGC.........................................................................................................................................................22200.0510000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------------------------------------------------------------------------------------------------------GCA---ACA--------GCAA------------------------------------C---------------AGC..........................................................................................................................................................................................18200.0511000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GCA---ACA--------GCA..................................................................................................................................................................................................................................................21200.0511000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCA---G------CAGCAACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GC....................................................................................................................................................................................................................................................................24200.0511000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---G------CAGCAACAGCAGCAGCA---------------------------------------------------------------------------------------------------------------GC....................................................................................................................................................................................................................................................................23200.0510100000
dp5
GC---------------------------------------------AACAGCAACATATGC-AACAG-----------------------------CAAAATATGCAGCAGCAACATCTGC--------AAC---------------------------------------------------------------------------------AGCA---------------A-----------CATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCA-----------ACAGCA------GAAGCA------G--CAGCAA-CAGAAGCAGCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCAGCAACAACAGAAG------------------CAG---CA------------------------G------C---AACA-------GCAGCAGCA---------------------------GAAG---CAGC-----------------------------------------------------------------------CGCAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GCAGCAGCA---------------------------GAAG---CAGC-----------------------------------------------------------------------CGCAG.2311.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGAAG------------------CAG---CA------------------------G------C---.......................................................................................................................................1970.1410010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA-----------ACAGCA------GAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................19170.0610100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGC..................................................................................................................................................................................................................20200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------G------C---AACA-------GCAGCAGCA---------------------------G.......................................................................................18200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGC.....................................................................................................................................................................................................................24200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCAGC...............................................................................................................................................................................................................27200.0510000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACA.......................................................................................................................................................................................................................21200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCA.................................................................................................................................................................................................................22200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CAG---CA------------------------G------C---AACA-------GCAGCAGCA---------------------------........................................................................................21200.0510000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCAGC...............................................................................................................................................................................................................26200.0510000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCA.................................................................................................................................................................................................................27200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGC.....................................................................................................................................................................................................................23200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCA.................................................................................................................................................................................................................26200.0510001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGCAGCAACA...........................................................................................................................................................................................................21200.0510000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CA..........................................................................................................................................................................................................................21200.0510000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAGC..................................................................................................................................................................................................................24200.0510000000001
droPer2
GA---------------------GCATGTATGGTCAGGCAATGGGCCAGCAGCAACCA---C-AGCC--AA---------------------------------CGCAGCAGCAA------------------CAAGTGGTTGTGCCACCT-GTGGCGGCCCAGCCGCAACC---GCCAG------------------------------------------------TGGCAACAACA------CAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAAC--AACA--------------------------A-GTGCAGCAGCA---G---------------------------------------------------------------------------------------------------------------------------------------CACCA-----------ACAG---------------------CAGCAGCAGCAACAACAACAGCAG---C---------------AG---CA------------AC------AACAACAGCAAC---AACA-------GCAG------------------------------------------CA---------ACAGCAA---T-CGCTCAAT-------------------------GACC-AACTGCAGCATTCCATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAAC---AACA-------GCAG------------------------------------------CA---------ACAG...............................................................2650.201010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCA-----------ACAG---------------------CAGCAGCAGCAACA..............................................................................................................................................................................................................2370.141001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAAC---AACA-------GCAG------------------------------------------CA---------ACAG...............................................................2390.111010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------AACAACAGCAAC---AACA-------GCAG------------------------------------------C.............................................................................23110.091001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---G---------------------------------------------------------------------------------------------------------------------------------------CACCA-----------ACAG---------------------CAGCAGCAGC..................................................................................................................................................................................................................21150.071001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGCAG---.................................................................................................................................................................................................20200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAAC---AACA-------GCAG------------------------------------------CA---------AC.................................................................21200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---C---------------AG---CA------------AC------AACAACAGCAA...........................................................................................................................................20200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAACAACAGCAG---C---------------A................................................................................................................................................................................26200.051001000
droWil2
CT---------------------------------------------TGTGACAT---------------------------------------------------------------CAC------------C----------------------------------AGTA---TCCATTGGCT-------------TAAGGGCGC-----------GC-GGAGCAGATGCTG--------------------------------------------------------CG-----------------------------------------------------------------------------------------------------------------------------------CTCGCAGC--AG------------------C-----A----GCACCACCACCA---GCAGCAGCAGCAACAGCAGCAACA--------------------------------------------------------------------------------------------------------------------------------ACAA---------------------------------C------AGCAG------------------CAA---CAGCAACAG---CAGCAGCAGCAG---------C---AGGCG----GCGCAG------------------------------------------CA---------ACT---G----------------------------------------GC-----------ATCCGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------C---AGGCG----GCGCAG------------------------------------------CA---------...................................................................1911.00100010
CT---------------------------------------------TGTGACAT---------------------------------------------------------------CAC------------C----------------------------------AGTA---TCCATTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
........................................................................................................................................................................AGTA---TCCATTGGCT-------------TAAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGC--AG------------------C-----A----GCACCACCACCA---GCAGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
..................................................................................................................................................................................ATTGGCT-------------TAAGGGCGC-----------GC-GG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAGCAACAG---CAGCAGCAGCAG---------C---.......................................................................................................................................23200.10200020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACA--------------------------------------------------------------------------------------------------------------------------------ACAA---------------------------------C------AGC......................................................................................................................................................................................................20200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------CAA---CAGCAACAG---CAGCAGCAGCA.....................................................................................................................................................25200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA--------------------------------------------------------------------------------------------------------------------------------ACAA---------------------------------C------AGCAG------------------CAA---CAGCAA......................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCA---GCAGCAGCAGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC--AG------------------C-----A----GCACCACCACC.................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC--AG------------------C-----A----GCACCACCAC..................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------------------C------AGCAG------------------CAA---CAGCAACAG---CA..............................................................................................................................................................23200.05100001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAA---CAGCAACAG---CA..............................................................................................................................................................18200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACA--------------------------------------------------------------------------------------------------------------------------------ACAA---------------------------------C------AGC......................................................................................................................................................................................................22200.05100010
droVir3
GG---------------------------------------------CGCAGCAACAG---C-TGGC--GGCAC------------------------AGC------AGCAA---------------------CAGTTGGCC--------------------------------------------------------GT------A-----------GCGG------CAGCTGCGGCA---CATCAACAGCAGCAACAGCAGCAGGCCGCCGCCGCTGTAGTTGTCCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGCA---ACAGCA------------------------GCAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGCAG---CAGC------AGGTGCAGCAGCAACA---GCAGCAG---CA---------------------G---------C---AACAGGCGGCAGCAG---CA---------------------------------GCAGC----------------------T---------------------------------------G------CTGTCAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................GCAGGCCGCCGCCGCTGTAGTTGTCCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAG---CA---------------------G---------C---AACAGGCGGCAGC..........................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GTCCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................AGTTGGCC--------------------------------------------------------GT------A-----------GCGG------CAGCTGCGGCA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTAGTTGTCCAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------C...........................................................................................................................................................................................................................22200.408105000000000000000000000010000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAGCA------------------------GCAGCAACATCAG---------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA---ACAGCA------------------------GCAGCA.........................................................................................................................................................................................................................................................................................................................................................................21200.255000000000000000004000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................CA---CATCAACAGCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------CAGCAG---CAGC------AGGTGCAGCA...............................................................................................................................................................................................2140.251000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------............................................................................................................................................................................................................................21200.255000000000000000010000000000000000000002000000000000000000000020
..................................................................................................................................................................................................................................................................................................CAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGCA---ACAGCA------------------------...............................................................................................................................................................................................................................................................................................................................................................................2360.171001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGCA---ACAG.........................................................................................................................................................................................................................................................................................................................................................................................................2360.171000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------GCAG---------------------CAGCAG---CAGC------AGGTGC...................................................................................................................................................................................................2270.141001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------------CAGCAG---CAGC------AGGTGC...................................................................................................................................................................................................2080.131000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGCA---ACAGCA------------------------GCAGCA.........................................................................................................................................................................................................................................................................................................................................................................25200.102001000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GCAGCAACATCAG---------------------------------------------------------------------------------------------CAGC.................................................................................................................................................................................................................................................................19200.102001000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CAGCAGCAGCA---ACAGCA------------------------GCA............................................................................................................................................................................................................................................................................................................................................................................21200.102001000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CA..........................................................................................................................................................................................................................19200.102000000000000000000000000000000000100100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA------------------------GCAGCAACATCAG---------------------------------------------------------------------------------------------C....................................................................................................................................................................................................................................................................20110.091000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---CA---------------------G---------C---AACAGGCG...............................................................................................................................19130.081000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-CAGCAGCAGCA---ACA..........................................................................................................................................................................................................................................................................................................................................................................................................21160.061000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA---GCAGCAG---CA---------------------.....................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---ACAGCA------------------------GCAGCA.........................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA---ACAGCA------------------------GCAGCAAC.......................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GCAGCAG---CA---------------------G---------C---AACA...................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CA..........................................................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------T...........................................................................................................................................................................................................................22200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAGCA------------------------GCAGCAACA......................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA---GCAGCAG---CA---------------------G---------C---AACA...................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACA---GCAGCAG---CA---------------------.....................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAGCA------------------------GCAGCAACATC....................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA---GCAGCAG---CA---------------------G---------C---A......................................................................................................................................20200.051000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------C...........................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-----------GCAG---------------------CAGCAG---CAGC------A........................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---GCAGCAG---CA---------------------G---------C---AAC....................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------GCAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------.....................................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GC...................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGCAG---...................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA---ACAGCA------------------------GCAGCAAC.......................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGCAG---C..................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGCAG---CA.................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGCAG---C..................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAACA---GCAGCAG---CA---------------------.....................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CAGCAGCAGCA---ACAGCA------------------------GC.............................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG---------------------------------------------------------------------------------------------CAGCA-----------GCAG---------------------CAGC........................................................................................................................................................................................................................19200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
GC---------------------GGGAGCAGG---------------AGCAGCAGTTG---A-AGCG--GG---------------------------AGC------AGCAA---------------------CAG-------------------------------------------------------------------------------------------------------------CAACT---------------------------------------------AC-----------------------------------------------------------------------------------------------------------------------------------AGC--AG------------------C-----A----GCAACTACATCA---GCAACTGCAGCAACAGCAACTACA---------------GCAGCAGTTGCGGGAGCAGGAGCAGCAGTTGCTGCGGGAGCAGGAGCAGCAGTTGCTGCGGGAGCAGGAGCAGCAGTTGCTGCGGGAGCAGGAGCAGCAA-----------------------------------------CAGCAGCAGTTGCAGCGGGAG---C---------------AG---------------------------GAG----------------------CAGCAACAGCAACTACAGCAGCAGTTGCAGCGGGAGCAGGAG--------------------------------------------------------------------------CAGCAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AACACA-----------------CG--CTCTGGTCAG---------CAGCAGCAGCAGCGGC-AGCAG-----------------------------CAGCAGCGGCAGCAGCAGCAGCGGC--------AGC---------------------------------------------------------------------------------AGCA---------------G-----------CAGCAGCA------------------------------------GCG-----------------------------------------------------------------------------------------------------------------------GCAGCAGCA---GCAGCAGC--AGCAGCA---------------GCA-----G-CGGCAGCAGCA---GCAGCA------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------CAGCAG---CAGC------AGCGGCAGCAGCAGCA---GCAGCAG---CA---------------------G---------C---AGCAG-CGGCAGCAGCAGCA---------------------------GCGGCAG--------------------------------------------------------------------------CAGCAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................TCAG---------CAGCAGCAGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.10220
.................................TCAG---------CAGCAGCAGCAGCGGC-AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.06110

Generated: 05/18/2015 at 05:44 AM