ID:

dan_2871

 Coordinate:

scaffold_13340:2790056-2790345 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.4 -16.3 -16.3

Flybase annnotation

intron [Dana\GF17660-in]; exon [dana_GLEANR_18922:4]; CDS [Dana\GF17660-cds]; CDS [Dana\GF17660-cds]; exon [dana_GLEANR_18922:3]; intron [Dana\GF17660-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#################################-----------------
CAATTCTACATTCAATCTCAGCTCCTTTCTCGACAAAGGAACTGTGCAAGGTATAAACCAATTACCCCACCATTACTTAATTTATTTAAAACTAATGCTTAAATTATATCCATTTCTCCCTCTCTCGAATCTCTCTCATGCGAATGCTGTGATATTTTTTGGCTTTTTCATTTATTCTATTTTAAAAAACTTAACAATTTCTAAACCAAAAAACAAAAATTAATAACGAATTTCGCCGCTTACTGACACATCTACCATACATCATGCTGACTAACAACAACAACAACGACATCAAAATATATATCTAAACTTGATATTGAAAATCGAACAATGTATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATTATGCAGAA
**************************************************(((((...............(((((.((((.....))))...)))))..........................................(((((...(((..((.((((((..(((((..((((.......((((.....)))).......))))..))))).)))))).))...)))...)))))..................................................(((..(((......(((((.......))))))))...))).......)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V055
head
 V039
embryo
.................................................................................................................................................................................................................................................................................................................................................AAGATGGTGGCATGGGCGTTCCA.............................. 23 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTT................................. 18 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................CTACCATACATCATGCTGAC....................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................AAAACAAAAATCAATAACGA................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................GTTCCAGGTGGCAGAATG.................. 18 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCC............................... 18 0 1 1.00 1 0 0 1 0 0
......TACATTCAATCTCAGCTCCTTTCTCGAC.................................................................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.....................................................TAAGCAAATTACCCCACCA.............................................................................................................................................................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................TGAACACAGATGGTGGCAT........................................ 19 2 3 0.33 1 0 0 1 0 0
..........TTCAACCTCAGCTCCTTGATC....................................................................................................................................................................................................................................................................................................................................................................... 21 3 8 0.25 2 0 2 0 0 0
...........................................................................................................................................................................TTATTCTATTTCAAAAGACT....................................................................................................................................................................................................... 20 2 5 0.20 1 0 0 1 0 0
..........................................................................................................................................................................................AAACCTTACATTTTCTAAACCA...................................................................................................................................................................................... 22 3 5 0.20 1 1 0 0 0 0
.......................................GACTGTGCAAGGCATAAA............................................................................................................................................................................................................................................................................................................................................. 18 2 5 0.20 1 1 0 0 0 0
....................................................ATGAGCTAATTACCCCACCA.............................................................................................................................................................................................................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0
.............ATTCTCAGCTACTTTCACGA..................................................................................................................................................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 1
.....................................................................................................................CCCTTTCTCGAATCTCTG............................................................................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 1 0
...................................................................................................................................................................................................................................................................................................................................................GATGGAGGCAGGGGCGTT................................. 18 2 14 0.07 1 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................................................CATACAGATCGTGACATGG...................................... 19 3 17 0.06 1 0 0 0 0 1
............................................................................................................TCCGTTTCTTGCTCTCTCGA...................................................................................................................................................................................................................................................................... 20 3 19 0.05 1 0 0 0 1 0
..................................................................................................................................................................................................................................................................................CAAAAACAACCACGACACCAAAA............................................................................................. 23 3 20 0.05 1 1 0 0 0 0
....................................................AAAAACGAATTCCCCCACCA.............................................................................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................AATAACGGATTTGTCCGCT...................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
..................................................................................................................................................................................................................AAACAAGAATTAGTATCGAA................................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0
......................................................AAACAAATTACGCCACCA.............................................................................................................................................................................................................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................CATTTATTTTATTTTGAAAAA......................................................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTTAAGATGTAAGTTAGAGTCGAGGAAAGAGCTGTTTCCTTGACACGTTCCATATTTGGTTAATGGGGTGGTAATGAATTAAATAAATTTTGATTACGAATTTAATATAGGTAAAGAGGGAGAGAGCTTAGAGAGAGTACGCTTACGACACTATAAAAAACCGAAAAAGTAAATAAGATAAAATTTTTTGAATTGTTAAAGATTTGGTTTTTTGTTTTTAATTATTGCTTAAAGCGGCGAATGACTGTGTAGATGGTATGTAGTACGACTGATTGTTGTTGTTGTTGCTGTAGTTTTATATATAGATTTGAACTATAACTTTTAGCTTGTTACATATGTCTACCACCGTACCCGCAAGGTCCACCGTCTTACCCACTCATAATACGTCTT
**************************************************(((((...............(((((.((((.....))))...)))))..........................................(((((...(((..((.((((((..(((((..((((.......((((.....)))).......))))..))))).)))))).))...)))...)))))..................................................(((..(((......(((((.......))))))))...))).......)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V055
head
 M058
embryo
 V105
male body		 V106
head
 V039
embryo
..........AAGTTGGAGTCGAGGAACTAG....................................................................................................................................................................................................................................................................................................................................................................... 21 3 8 5.75 46 44 0 0 2 0 0
...........AGTTGGAGTCGAGGAACTAG....................................................................................................................................................................................................................................................................................................................................................................... 20 3 19 2.53 48 44 0 0 4 0 0
...................................................................................................................................................ACACTAAAAAAAACCGAAAA............................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..........AAGTTGGAGTCGAGGAAC.......................................................................................................................................................................................................................................................................................................................................................................... 18 2 11 0.73 8 8 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................TGGGCCCGCAAGGTCCACCGTC...................... 22 3 2 0.50 1 0 1 0 0 0 0
...........................AGAGCTGTTACCTGGAAACG....................................................................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................TGACTGTGTAGAGCGTAAG.................................................................................................................................. 19 3 20 0.20 4 0 0 0 0 4 0
..............................................................................................................................................................................................................................................................GCTATGTAGTACGACGGACT.................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0
.......................................................................................................................GCAAGAGCTTAGAGAGACTA........................................................................................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0
..........AAGTTTGAGTCGAGGAACTAG....................................................................................................................................................................................................................................................................................................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0
.................................................................................................................AAGGGGGAGAGAGCTTAGTT................................................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 1 0 0 0 0
........................................................TCGGTAATGGGGTGGTA............................................................................................................................................................................................................................................................................................................................. 17 2 20 0.10 2 0 2 0 0 0 0
..........................................................................................................................................................AAAAGACAGAAAAAGTAAATA....................................................................................................................................................................................................................... 21 2 13 0.08 1 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TACCAGCAAGGACCACCG........................ 18 2 13 0.08 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................ATGATTGTGTAGATGGTATAG................................................................................................................................. 21 3 14 0.07 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TACCCGCAAGGACCACGG........................ 18 2 14 0.07 1 0 0 0 0 0 1
.........GAAGTTGGAGTCGAGGAA........................................................................................................................................................................................................................................................................................................................................................................... 18 2 18 0.06 1 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................GGTATGTTGTAGGACTG....................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................TTTGTAGTTGGTATGTATTA............................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 1
............................................................................................................................................................................................................................................................................................................................................................TAACCGCAAGGTCCACAGAC...................... 20 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:2790006-2790395 + dan_2871 CAATTCTACATTCAATCTCAGCTCCTTTCTCGACAAAGGAACTGTGCAAGGTATAAACCAATTACCCCACCATT-----------------A----CTTA--------------------------------------A-------------------T-T---TATTTAAAA------------CT-AATGCTTAAAT-TATATC-------CATTTCTCC-----------------CTCTC---TCG--AATCTC--------TCTCATGCGAATGCTG---TGA-TATTT-TTTGGCTT--TTTCATTTATTCT-AT--T-----TTA----AAAAAC-TT-------A---ACAATTTCTAAA--CCAAAAAACAAAAA----T------------------------------------TAATAACGAATTTCG-CCGCTTAC---TGAC--A-------CA---------TCTA-CCA-------TA--CA-------------------------------------TC----ATGCTGACTAACA-----------------------------ACAACAACAACGACATCA-AAA-------TA-------TATA-----------------------------TCTAAACTTGAT----ATTGAAAATCGAACAATGT---------ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATT--------ATGCAGAA
droBip1 scf7180000396712:1548547-1548963 - CAATTCTACATTCAATCTCAGCTCCTTTCTCGACAAAGGAACTGTGCAAGGTATAAAAAAATTAACTCATCATT-T-----------AACCAGCCCCTTA---------------------------------------------------------ATATTAAAATTTAAAA------------CT-AATGCTTAAAT-TATATT-------CATTTCTCC-----------------C----------TTGTTCTCTCTCTTCTTCTCATGCGATTGCTG---TGA--ATTT-TTTGGCTT--GTTCATTTATTTC---TTT-----TTA----AAAAACGTT-------A---ACAATTTCTAAAAACCAAA----AAAAA----T------------------------------------TAATAACGAATTTCG-CTGCTTAC---TGAC--A-------CA---------CATA-TTA---CCCATATA--AAAA-------------------------------CATC----ATGCTGACTAACA-----------------------------AAAAC---AACGACATGA-AAA-------TAC-----AAATA-----------------------------TCTAAACTTGATATATATTCGAAATCGAACAATGT---------ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------TTGCAGAA
droKik1 scf7180000302247:237046-237474 - CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAAAAACATCGTCCT--G--T-T-----------GAACTTC-CCTT-ACA----AGTTTCCATATACGCAT--CAAAGA--TTCAA------------------------ATATTATAAA------------CT-AATGCTTACAT-TCTGTT-------CATTCCTCT-----------------C----------TCATTCTCTCTATTCTACTCTTGCGAATGCTGCTCCGC-GAACG-TTTGGCTT--GTTCATTTGTACT-TTTAT-----TCG----A------TT-------AACAATAATTTCTAAT--CAAA-----AATTA---AT------------------------------------AAATACCGAAATGCG-ACGCTTACTACTGACACC-------CT---------CATA-CAA-------CA-----------------------------------------TC----ATGCTGGCTAACAA----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCAATCTTAAT----ATTCCAAAACGAACAATGTAAACCTT--ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------ATGCAGAA
droFic1 scf7180000452569:31641-32069 - CAATTCTACATTCAATCTCAGCTCCTTTCTGGATAAAGGAACTGTGCAAGGTA-AACTAAATTTCCTC--T--G-T-----------AACCATC-CTTTAAAAT--TTG-TTC---ATACGCAT--CGAATA--TTTGATCAAG-------CTACA-GTTA-CAAATTATTAA------------CT-AATGCTTACAT-TCTGTT-------CATCTCTTT-----------------C----------CCACTCTCTTT-CTCAAATCATGCGAATGCTG---CGC-GATTG-TTTGGCTT--GATCATTTGTACT---TAT-----TTA----A------TT-------AACAAAAATTTCGAAA--TAAA-----AATTA----A------------------------------------TAACACTGAATTGCG-CCGCTTAC---TGAC--A-------CA---------CATA-CCA-------CACAC--------------------------------------AA----ATGCTGGCTAACA-----------------------------ACAAC---------ATGAACAA-------TTC-----AATTA-----------------------------TCCGAACTAAAT----ATTCCAAATCAAACAATGTAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTAT-----------ACAGAA
droEle1 scf7180000491104:1406866-1407282 - CAATTCTACATTCAATCTTAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTACAACGGAATTGCCCC--T--T-T-----------AAATC-C-CCA-AAAAT--GTTGTCC---ACACTCAT--CAACAA--TTTGATCGAG-------TGACCATTTA-AAAATT-TTTA------------CT-AATGCTTACAT-TCTGAT-------CATCCCTCT-----------------T----------TCATCCTCTCT-TTTAATTCATGTGAATGCTG---CGC-GAACG-TTTGGCTT-----------------TTAT-----TTA----A------TT-------AACAACAATTTCTAAA--CAAA-----AATAA----C------------------------------------TAATTCCGAAATGCG-CCGCTTAC---TGAC--C-------CA---------CATATCCA-------CACA---------------------------------------AA---ACTGCTGGCTAATA-----------------------------A---T----------TTAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCGATCAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------ATGCAGAA
droRho1 scf7180000779927:63554-63965 + CAATTCCACGTTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAATTAAGTTTCCCT--T--C-------------AAAT--CCCCT-AAAAT--GTTTTTC---ATACCCAT--CAACAA--TTTGATCGAG-------TGACT---------ATTGAAAA------------CT-AATGCTTACAT-TTTAAT-------CATCCCCCT-----------------T----------TCATTCTCTCT-TTAAATTCATGTGAATGCTG---CGC-GAACG-A-TGGCTT-----------------TTAT-----TTC----A------TT-------AACAAAAATTTCTAAA--CAAA-----AATAA----T------------------------------------TAATACCGAATTGCG-GCGCTTAC---TGAC--C-------CA---------CATT-TTG-------CACACT-------------------------------------AT----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TCA-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAAAAAATTAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------ATACAGAA
droBia1 scf7180000302155:1613989-1614421 - CAACTCTACATTCAATCTGAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTACAACGATTCTTTCCT--T----------------ATTTT-C-CCA-AAAAA--GAGCTTC---ACACGCAT--CAAAGC--TTTGATCGAA-------TTATCAACTT-TAAATTTTTAA------------CT-AATGCTTACAT-TCTGAT-------CATCCCT-T-----------------C--TC---AT-TCATTCCCTCC-TTCAACTTATGCGAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-T-TAT-----TTA----A------TT-------AACCGTAATTTCTAAA--CAAA-----AATAA----T------------------------------------TAATTCTGAAATGCG-CCGCTTAC---TGAC--C-------CA---------CATT-CCT-------CACA---------------------------------------AA----ACGCTGGCTAACC-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCA-ACTAAAT----ACTCAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------AAACAGAA
droTak1 scf7180000415875:123296-123723 + CAACTCTACATTTAATCTCAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTATAACGAAAATTTCCA--T--T-C-----------AAATAC--TT--AAAAA--GTGTTTC---ATACGCAT--CAAAGA--TTTAATCGAG-------TTACCAATTT-AAAATT-TTAA------------CT-AATGCTTACAT-TT--AT-------CATTCCTCT-----------------C----------TCATTCTCTCT-T----CTCATGCAAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-TTTAT-----TTA----T------TT-------AACCATAATTTCTAAA--CAAA-----AATGT----T------------------------------------TAATTCCGAAATGCG-CTGCTTAC---TGAC--C-------CA---------CATA-CCA-------CACACA-------------------------------------AA----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TTCAAACTAAAT----ATTCAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------ATATAGAA
droEug1 scf7180000409796:185768-186206 + CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTTCAAGGTATAACGAAACATCCCT--T--TCCTA---------AAAT--CCACTT-AAA---TTGTTTC---ATACGCAT--ACATAA--TTTGATCAAG-------TTATAAATTTGAAAATTATTAA------------CT-AATGCTTACAT-TCTGAT-------CATTCCTCT-----------------C----------TCT-------------TCTCATGCGAATGCTG---CGT-GATCG-TTTGGCTT--G--------TACT-TTTAT-----TAA----A------TTAACAATTAACAATAATTTCTAAA--CAAA-----AATTA----T------------------------------------TAATACCGAAATGCG-CCGCTTAC---TGAC--C-------CA---------CATA-CTCTAAACCAAACA--AAAACA--CA---------------------------AA----CCGCTGGCTAACA-----------------------------ACAAC---------ATGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ACTCAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATT--------ATGCAGAA
dm3 chr3R:3016469-3016903 + CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTACAAGGTATAACGAAGCCTCCCT--T--T-T-----------AAGCCTC-CC---AAAT--TTGTTTC---AAACCCAT--CGACTA--TTCAATCGAT-------TTACCTATTT-CAAATTATTAA------------CT-AATACCTACAT-TTTGAT-------CATTCCTCT-----------------C----------TCATTCTCTCT-TTCAACTCATGCGAATGC-G---CGC-GAACG-TTTGGCTT--GATCATTTGTAAT-TTTGT-----TTA----C------TT-------AACAAAAATCTCTAAA--ACAA-----AAATA----T------------------------------------TAATACCGAAATGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CCG-------CACACT-------------------------------------AC----ATGCTGGCTAACA-----------------------------ACAAC----------TGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAACAATATAAACCTTATATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAA
droSim2 3r:2939470-2939904 + dsi_30796 CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTACAAGGTATAACGAAGCCACCCT--C--T-T-----------AAACT-C-CC--AA-ATTCTTGTTTC---AAACGCAT--TGACTA--T--ATTCAAT-------TTACCTATTT-CAAATTATTAA------------CT-AATACCTACAT-TTTGAT-------CATTCCTCT-----------------T----------TCATTCTCTCT-TTCAACTCATGCGAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-TTTAT-----TTA----A------TT-------AACAACAATTTCTAAA--CCAA-----AAATA----T------------------------------------TAATACCGAAATACG-CTGCTTAC---TGAC--C-------TA---------CATA-CCG-------CACACT-------------------------------------AC----ATGCTGGCTAACA-----------------------------ACAAC----------TGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAACAATATGAACCTTATATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAA
droSec2 scaffold_6:3108618-3109056 + CAATTCTACATTCAATCTTAGCTCCTTTCTGGACAAAGGAACTGTACAAGGTATAACGAAGCCACCCT--C--T-T-----------AAACT-C-CC--AA-ATTTTTGTTTC---AAACGCAT--TGACTATATTCAATCGAT-------TTACCTATTT-CAAATTATTAA------------CT-AATACCTACAT-TTTGAT-------CATTCCTCT-----------------T----------TCATTCTATCT-TTCAACTCATGCGAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-TTTAT-----TTA----A------TT-------AACAACAATTTCTAAA--CCAA-----AAATA----T------------------------------------TAATACCGAAATGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CCG-------CACACT-------------------------------------AC----ATGCTGGCTAACA-----------------------------ACAAC----------TGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAACAATATGAACCTTATATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAA
droYak3 3R:7323565-7323993 - CAATTCGACATTCAATCTCAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTATAAATAT------TT--T--T-T-----------AAATAT--CC--AAAAT--TTGTTTC---GAACGCAT--CGACGA--TTTAATCGAT-------TTACCTATTT-TAAATTGTTCA------------CT-AATGCCTACAT-TTTGAT-------CATTCCTCT-----------------C----------TCATTCTCTTT-TTCAACTCATGCAAATGCTG---CGC-GAACG-TTTGGCTT--CATCATTTGTACT-TTTAT-----TTG----A------TT-------AACAACAATTTCTAAA--CCAA-----ATATA----T------------------------------------TAATACCGAATTGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CAA-------CATACA-------------------------------------AT----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCAAAATAAAT----ATTCAATATCAAAAAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTAAGTATT--------ACACAGAA
droEre2 scaffold_4770:3279191-3279620 + CAATTCTACATTCAATCTCAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTATAACGAAGCGTCCCT--T--T-T-----------AAATGT--CC--AAAAT--TTGCTTC---AAACGCAT--CGACGA--TTTAATCGAT--------TACCTTTTA-TAAATTATTAA------------CT-AATGCCTATAT-TTTGAT-------CATTCCTCT-----------------C----------TCATTCTCTCA-TTCAACTCATACGAATGCTG---CGC-GAACG-TTTGGCTT--CTTCAT-TGTACT-TTTAT-----TTA----A------TT-------AAC---AATTTCTAAA--CCAA-----AAATA----T------------------------------------TAATATCGAAATGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CCA-------CACACA-------------------------------------AT----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCGAACTAAAT----ATTTAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGAGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAA
dp5 2:26428245-26428685 + dps_817 CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAAAGATATTGCCCT--T--AACTAATGCTCAAAAAAT--CCCACT-AAC---CA-TT------------T--CCATTA--TTTGAACCAAAACAAAATGC---ATAT-AAATTTATAAA------------AT-AAAGCTTACAT-TCTGT---------ATTCCTCT-----------------CTCTC---TT-TCCTTCT----------CTC------ATGCTG---CGC-AAACG-TTTGGCTTTTACTCATTTCTCAT-TTTTT-----TTG----T------TT--------AC-ATA--CTTTTAA--CAA---------AATTAATTAAAATTCTTAACAA---------------------AAATACCAAAATGCG-TCGCTTAC---TCAC--AAAAACAATA---------CATG-CAA-------CATACAACAA-------------------------------C-AT----TTGCTGGCTAACA-----------------------------A---C---------TCGAA--T--CGAAATACTACAAAAATA-----------------------------TCAAAACTAAAT----ATTCCAAA---------------------AGCAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------TTGCAACA
droPer2 scaffold_6:1756988-1757441 + dpe_1886 CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAAAGATATTGCCCT--T--AACTAATGCTCAAAAAAT--CCCACT-AAC---CATTTCC---ATATCCATTTCCATTA--TTTGAACCAAAACAAAATGC---ATAT-AAATTTATAAA------------AT-AAAGCTTACAT-TCTGT---------ATTCCTCT-----------------CTCTC---TT-TCCTTCT----------CTC------ATGCTG---CGC-AAACG-TTTGGCTTTTACTCATTTCTCAT-TTTTTTTTTTTT----------------------AC-ATA--CTTTTAA--CAA---------AATTAATTAAAATTCTTAACAA---------------------AAATACCAAAATGCG-TCGCTTAC---TCAC--AAAAACAATA---------CATG-CAA-------CATACAACAA-------------------------------C-AT----TTGCTGGCTAACA-----------------------------A---C---------TCGAA--T--CGAAATACTACAAAAATA-----------------------------TCAAAACTAAAT----ATTCCAAA---------------------AGCAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------TTGCAACA
droWil2 scf2_1100000004943:16624792-16625083 + AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------CT-AATGCTTATTT-----ATCATTCTATATCTATAT-----------------CTATT---CTG--A---------TTCTTCTCTGATGAATGCTGCTGCGC-GTGTG-TTTGGCTTT-AATCATTTGTTTC-TATTTTTTTTTTGTATAA------TT-------AATA-CACCTTTTAAA--TAA---------AA----T------------------------------------TAAT-----ATGGCG-CTGCTTAC---TTAC--A-------CT---------CATT-CTC--AACTATAAA--AAATCA--------------------------------------------------------------------------------------------CATTT-AAATA------------------TTATTTATGAAC----TTAAATAATGTCG---------TAT----CAAT-AAATC---------GAATCAA--ATACAGATGGTGGCATGGGAGTTCCAGGTGGCAGAATGGGTGAGTATT--------A---AGTA
droVir3 scaffold_12855:5814214-5814612 + ACTAC------------TTAACTAT-ATTTG-A-AATTGAATATTACATGG---------------------------------------------------------------------------------------------------------------------------------------------CTTACCA-TATCTT-------TTTTCTCTTCTCTTTCTATTTTCACTCATTTTATTCG--A---------ATAATCACATGTGAATGCTG---CGAATTGCG-TTTGGCTT--ATTCATTTGTGTA-TTCGT-----TCT----A------AT-------GATAACATT-TC--------------------------------------AATAAT-ATATTGTGCCTCAAATTTAAACTAAATTGCG-CTGCTTAC---ACAT--A-------CACAAACGCAA-----ACA-------CACAC--AAACACATA----------------------AAA---TAAAT---CTAATTATTAATAACTTTGAAATTCATTCCTAATAC---------------------------------------------------------ATATATAAAAA-AAACATATAAATAATAT----ATGCAAATGCGAA--TTATGAACCTATACTGCAGATGGTGGCATGGGCATTCCGGGTGGCAGAATGGGTGAGTATTTGTTTCAAAAACAGAA
droMoj3 scaffold_6540:6144768-6145143 + ACTATTTA------------ACT-----------------------------------------------------------------------------------TTG------------------------------------------------------------TTATACAAATATAATATTACATGCTTCTCCCTCTGCT-------CTTCTCT------------------------------TTATGCTCTCA-CT---CACACTTGAATGCTG---CGAATCGCG-TTTGGCCT--ATTCATTTGTGTAATTCGT-----TCT----A------AT-------GATAACATT-G--AAA--TAAT-----AAC--------------------AATAATAATACTGTGCCTCGACTATCAACTAAAACGCG-CTGCTTAC---TCAC--A-------TACAAACACAC-----TCA-------CACAC--ATATACATGTAAAATCAAAAATTCATATATAAAACATC----ATTCTTAATA----------------------------TATAAAAAT---ATA----------------------------------------------TATATGAA-AAATATATAAATAATAT----ATGC-AATGCGAA--TTATGAACCTATACTACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATT----------------
droGri2 scaffold_14906:8198531-8198837 - TCTCTC------------------ATTTTTGACTCAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACATGTGAATGCTG---CGA-TTGCGATTTGGCTT--ATTCATTTGTGTA-TTCGT-----TCT----A------AT-------GATAACATT-TC--------------------------------------AATAATAATATTGCGCCTCGAATTTGAACTGCAATGCGACTGCTTAC---TCAC--A-------CA---------AACA-C----------ACA----------------------------------TAA---TCAAT---CTAATCCTAATTAATTTTGAAAATCATTCCTAATTT---------------------------------------------ATACCTATAAACATATTTAAACATAAACG---------TAT----CTGCAATTGCGAA--TTATGAACCTATACTACAGATGGTGGCATGGGCGTTCCAGGTGGGAGAATGGGTGAGTATT--------TTTGATAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAATTCTACATTCAATCTCAGCTCCTTTCTCGACAAAGGAACTGTGCAAGGTATAAACCAATTACCCCACCATT-----------------A----CTTA--------------------------------------A-------------------T-T---TATTTAAAA------------CT-AATGCTTAAAT-TATATC-------CATTTCTCC-----------------CTCTC---TCG--AATCTC--------TCTCATGCGAATGCTG---TGA-TATTT-TTTGGCTT--TTTCATTTATTCT-AT--T-----TTA----AAAAAC-TT-------A---ACAATTTCTAAA--CCAAAAAACAAAAA----T------------------------------------TAATAACGAATTTCG-CCGCTTAC---TGAC--A-------CA---------TCTA-CCA-------TA--CA-------------------------------------TC----ATGCTGACTAACA-----------------------------ACAACAACAACGACATCA-AAA-------TA-------TATA-----------------------------TCTAAACTTGAT----ATTGAAAATCGAACAATGT---------ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATT--------ATGCAGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTT.........................................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA-CCA-------TA--CA-------------------------------------TC----ATGCTGAC.....................................................................................................................................................................................................................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCAGGTGGCAGAATG..........................1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCC.......................................1811.001000001
......TACATTCAATCTCAGCTCCTTTCTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droBip1
CAATTCTACATTCAATCTCAGCTCCTTTCTCGACAAAGGAACTGTGCAAGGTATAAAAAAATTAACTCATCATT-T-----------AACCAGCCCCTTA---------------------------------------------------------ATATTAAAATTTAAAA------------CT-AATGCTTAAAT-TATATT-------CATTTCTCC-----------------C----------TTGTTCTCTCTCTTCTTCTCATGCGATTGCTG---TGA--ATTT-TTTGGCTT--GTTCATTTATTTC---TTT-----TTA----AAAAACGTT-------A---ACAATTTCTAAAAACCAAA----AAAAA----T------------------------------------TAATAACGAATTTCG-CTGCTTAC---TGAC--A-------CA---------CATA-TTA---CCCATATA--AAAA-------------------------------CATC----ATGCTGACTAACA-----------------------------AAAAC---AACGACATGA-AAA-------TAC-----AAATA-----------------------------TCTAAACTTGATATATATTCGAAATCGAACAATGT---------ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------TTGCAGAASizeHit CountTotal NormTotal
No Reads
droKik1
CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAAAAACATCGTCCT--G--T-T-----------GAACTTC-CCTT-ACA----AGTTTCCATATACGCAT--CAAAGA--TTCAA------------------------ATATTATAAA------------CT-AATGCTTACAT-TCTGTT-------CATTCCTCT-----------------C----------TCATTCTCTCTATTCTACTCTTGCGAATGCTGCTCCGC-GAACG-TTTGGCTT--GTTCATTTGTACT-TTTAT-----TCG----A------TT-------AACAATAATTTCTAAT--CAAA-----AATTA---AT------------------------------------AAATACCGAAATGCG-ACGCTTACTACTGACACC-------CT---------CATA-CAA-------CA-----------------------------------------TC----ATGCTGGCTAACAA----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCAATCTTAAT----ATTCCAAAACGAACAATGTAAACCTT--ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------ATGCAGAASizeHit CountTotal NormTotal
No Reads
droFic1
CAATTCTACATTCAATCTCAGCTCCTTTCTGGATAAAGGAACTGTGCAAGGTA-AACTAAATTTCCTC--T--G-T-----------AACCATC-CTTTAAAAT--TTG-TTC---ATACGCAT--CGAATA--TTTGATCAAG-------CTACA-GTTA-CAAATTATTAA------------CT-AATGCTTACAT-TCTGTT-------CATCTCTTT-----------------C----------CCACTCTCTTT-CTCAAATCATGCGAATGCTG---CGC-GATTG-TTTGGCTT--GATCATTTGTACT---TAT-----TTA----A------TT-------AACAAAAATTTCGAAA--TAAA-----AATTA----A------------------------------------TAACACTGAATTGCG-CCGCTTAC---TGAC--A-------CA---------CATA-CCA-------CACAC--------------------------------------AA----ATGCTGGCTAACA-----------------------------ACAAC---------ATGAACAA-------TTC-----AATTA-----------------------------TCCGAACTAAAT----ATTCCAAATCAAACAATGTAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTAT-----------ACAGAASizeHit CountTotal NormTotal
No Reads
droEle1
CAATTCTACATTCAATCTTAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTACAACGGAATTGCCCC--T--T-T-----------AAATC-C-CCA-AAAAT--GTTGTCC---ACACTCAT--CAACAA--TTTGATCGAG-------TGACCATTTA-AAAATT-TTTA------------CT-AATGCTTACAT-TCTGAT-------CATCCCTCT-----------------T----------TCATCCTCTCT-TTTAATTCATGTGAATGCTG---CGC-GAACG-TTTGGCTT-----------------TTAT-----TTA----A------TT-------AACAACAATTTCTAAA--CAAA-----AATAA----C------------------------------------TAATTCCGAAATGCG-CCGCTTAC---TGAC--C-------CA---------CATATCCA-------CACA---------------------------------------AA---ACTGCTGGCTAATA-----------------------------A---T----------TTAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCGATCAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------ATGCAGAASizeHit CountTotal NormTotal
No Reads
droRho1
CAATTCCACGTTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAATTAAGTTTCCCT--T--C-------------AAAT--CCCCT-AAAAT--GTTTTTC---ATACCCAT--CAACAA--TTTGATCGAG-------TGACT---------ATTGAAAA------------CT-AATGCTTACAT-TTTAAT-------CATCCCCCT-----------------T----------TCATTCTCTCT-TTAAATTCATGTGAATGCTG---CGC-GAACG-A-TGGCTT-----------------TTAT-----TTC----A------TT-------AACAAAAATTTCTAAA--CAAA-----AATAA----T------------------------------------TAATACCGAATTGCG-GCGCTTAC---TGAC--C-------CA---------CATT-TTG-------CACACT-------------------------------------AT----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TCA-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAAAAAATTAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------ATACAGAASizeHit CountTotal NormTotal
No Reads
droBia1
CAACTCTACATTCAATCTGAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTACAACGATTCTTTCCT--T----------------ATTTT-C-CCA-AAAAA--GAGCTTC---ACACGCAT--CAAAGC--TTTGATCGAA-------TTATCAACTT-TAAATTTTTAA------------CT-AATGCTTACAT-TCTGAT-------CATCCCT-T-----------------C--TC---AT-TCATTCCCTCC-TTCAACTTATGCGAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-T-TAT-----TTA----A------TT-------AACCGTAATTTCTAAA--CAAA-----AATAA----T------------------------------------TAATTCTGAAATGCG-CCGCTTAC---TGAC--C-------CA---------CATT-CCT-------CACA---------------------------------------AA----ACGCTGGCTAACC-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCA-ACTAAAT----ACTCAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------AAACAGAASizeHit CountTotal NormTotal
No Reads
droTak1
CAACTCTACATTTAATCTCAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTATAACGAAAATTTCCA--T--T-C-----------AAATAC--TT--AAAAA--GTGTTTC---ATACGCAT--CAAAGA--TTTAATCGAG-------TTACCAATTT-AAAATT-TTAA------------CT-AATGCTTACAT-TT--AT-------CATTCCTCT-----------------C----------TCATTCTCTCT-T----CTCATGCAAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-TTTAT-----TTA----T------TT-------AACCATAATTTCTAAA--CAAA-----AATGT----T------------------------------------TAATTCCGAAATGCG-CTGCTTAC---TGAC--C-------CA---------CATA-CCA-------CACACA-------------------------------------AA----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TTCAAACTAAAT----ATTCAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCGGGTGGCAGAATGGGTGAGTATA--------ATATAGAASizeHit CountTotal NormTotal
No Reads
droEug1
CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTTCAAGGTATAACGAAACATCCCT--T--TCCTA---------AAAT--CCACTT-AAA---TTGTTTC---ATACGCAT--ACATAA--TTTGATCAAG-------TTATAAATTTGAAAATTATTAA------------CT-AATGCTTACAT-TCTGAT-------CATTCCTCT-----------------C----------TCT-------------TCTCATGCGAATGCTG---CGT-GATCG-TTTGGCTT--G--------TACT-TTTAT-----TAA----A------TTAACAATTAACAATAATTTCTAAA--CAAA-----AATTA----T------------------------------------TAATACCGAAATGCG-CCGCTTAC---TGAC--C-------CA---------CATA-CTCTAAACCAAACA--AAAACA--CA---------------------------AA----CCGCTGGCTAACA-----------------------------ACAAC---------ATGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ACTCAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATT--------ATGCAGAASizeHit CountTotal NormTotal
No Reads
dm3
CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTACAAGGTATAACGAAGCCTCCCT--T--T-T-----------AAGCCTC-CC---AAAT--TTGTTTC---AAACCCAT--CGACTA--TTCAATCGAT-------TTACCTATTT-CAAATTATTAA------------CT-AATACCTACAT-TTTGAT-------CATTCCTCT-----------------C----------TCATTCTCTCT-TTCAACTCATGCGAATGC-G---CGC-GAACG-TTTGGCTT--GATCATTTGTAAT-TTTGT-----TTA----C------TT-------AACAAAAATCTCTAAA--ACAA-----AAATA----T------------------------------------TAATACCGAAATGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CCG-------CACACT-------------------------------------AC----ATGCTGGCTAACA-----------------------------ACAAC----------TGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAACAATATAAACCTTATATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TCCAAACTAAAT----ATTCAA......................................................................................2018.0080000000000000000000000000000000000000000000000000000000003050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGTGGCATGGGCGTT.........................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTTCCTG.....................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000100000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TCCAAACTAAAT----ATTCAAAA....................................................................................2214.0040000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCCTG.....................................2014.0040000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
................................ACAAAGGAACTGTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TCCAAACTAAAT----ATTCA.......................................................................................1914.0040000000000000000000000000000000000000000000000000000000001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCCTGG....................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCGTTCCTGGTGGCAGAATGGGTT......................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCCTGGTGGCAGAATGG.........................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTTCCTGG....................................2313.0030000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCTGGTGGCAGAAT...........................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAGAATGG.........................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCCTGGTG..................................2312.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAG..............................1912.0020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCTCCTTTCTGGACAAAGGAACTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TCCAAACTAAAT----ATTCAAA.....................................................................................2112.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGCATGGGCGTTCCT......................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000
.................................CAAAGGAACTGTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGATGGTGGCATGGGCGTTCCT......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAC---TGAC--C-------TA---------CATA-CC......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCCT......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................GACAAAGGAACTGTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAGAATGGGT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAGAATGGGTT......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTACATTCAATCTCAGCTCCTTTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCTGGTGGCAGAATGG.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CATTCAATCTCAGCTCCTTTCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCGTTCCTGGT...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................TCTGGACAAAGGAACTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCTCCTTTCTGGACAAAGGAACTGTACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGACAAAGGAACTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTGGCAGAATGGT........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................TTTCTGGACAAAGGAACTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTCTGGACAAAGGAACTGTACAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCTGGTGGCAGAATG..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGCGTTCCTGGTGGCAGA.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCTCTCT-TTCAACTCATGCGAATGC-G---CG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGCATGGGCGTTCCTGGTGGC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................TCAGCTCCTTTCTGGACAAAGGAACTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCTCCTTTCTGGACAAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGCGTTCCTGGTGG.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCGTTCCTGGTGGCAGAAT...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................CTTTCTGGACAAAGGAACTGTACAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCGTTCCTGGTGGCAGA.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGTGGCAGAATGGGTGAGT...................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGTGGCAGAATGGGTGA.....................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAGAAT...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCTGGTGGCA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCGTTCCTGGTGG.................................1811.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TATAACGAAGCCTCCCT--T--T-T-----------AAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCGTTCCTGGTGGCAGAATGG.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTCAATCTCAGCTCCTTTCTGGACAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAA-------TGC-----AATTA-----------------------------TCCAA.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAA...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTCAGCTCCTTTCTGGACAAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGCGTTCCTGGTGGC................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTT.........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCATGGGCGTTCCTGGTGGCA...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATCTCAGCTCCTTTCTGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AATTCTACATTCAATCTCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCTTTCTGGACAAAGGAACTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAAC..............................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTCAATCTCAGCTCCTTTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTCCTTTCTGGACAAAGGAACTGTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCTGGTGGC................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAGAATGGG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGGGCGTTCCTGGTGGCAGAAT...........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTTCCT......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................TTTCTGGACAAAGGAACTGTACAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATGGGCGTTCCTGGTGGCAGAAT...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGGGCGTTCCTGGTGGCAGAATG..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.AATTCTACATTCAATCTCAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GC-G---CGC-GAACG-TTTGGCTT--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTACATTCAATCTCAGCTCCTTTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTGGCAGAATG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTCCTGGTGGCAGAATGGGT.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................CAAAGGAACTGTACAAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGCAGAATGGGTT......................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droSim2
CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTACAAGGTATAACGAAGCCACCCT--C--T-T-----------AAACT-C-CC--AA-ATTCTTGTTTC---AAACGCAT--TGACTA--T--ATTCAAT-------TTACCTATTT-CAAATTATTAA------------CT-AATACCTACAT-TTTGAT-------CATTCCTCT-----------------T----------TCATTCTCTCT-TTCAACTCATGCGAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-TTTAT-----TTA----A------TT-------AACAACAATTTCTAAA--CCAA-----AAATA----T------------------------------------TAATACCGAAATACG-CTGCTTAC---TGAC--C-------TA---------CATA-CCG-------CACACT-------------------------------------AC----ATGCTGGCTAACA-----------------------------ACAAC----------TGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAACAATATGAACCTTATATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................TTTCTGGACAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00311100000000000000
........................CTTTCTGGACAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000000000
................................ACAAAGGAACTGTACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
..............ATCTCAGCTCCTTTCTGGACAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...............TCTCAGCTCCTTTCTGGACAAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
....TCTACATTCAATCTCAGCTCCTTTCTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCTGGTG..................................1511.00100000000001000000
droSec2
CAATTCTACATTCAATCTTAGCTCCTTTCTGGACAAAGGAACTGTACAAGGTATAACGAAGCCACCCT--C--T-T-----------AAACT-C-CC--AA-ATTTTTGTTTC---AAACGCAT--TGACTATATTCAATCGAT-------TTACCTATTT-CAAATTATTAA------------CT-AATACCTACAT-TTTGAT-------CATTCCTCT-----------------T----------TCATTCTATCT-TTCAACTCATGCGAATGCTG---CGC-GAACG-TTTGGCTT--GATCATTTGTACT-TTTAT-----TTA----A------TT-------AACAACAATTTCTAAA--CCAA-----AAATA----T------------------------------------TAATACCGAAATGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CCG-------CACACT-------------------------------------AC----ATGCTGGCTAACA-----------------------------ACAAC----------TGAAAAA-------TGC-----AATTA-----------------------------TCCAAACTAAAT----ATTCAAAATCAAACAATATGAACCTTATATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CAATTCGACATTCAATCTCAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTATAAATAT------TT--T--T-T-----------AAATAT--CC--AAAAT--TTGTTTC---GAACGCAT--CGACGA--TTTAATCGAT-------TTACCTATTT-TAAATTGTTCA------------CT-AATGCCTACAT-TTTGAT-------CATTCCTCT-----------------C----------TCATTCTCTTT-TTCAACTCATGCAAATGCTG---CGC-GAACG-TTTGGCTT--CATCATTTGTACT-TTTAT-----TTG----A------TT-------AACAACAATTTCTAAA--CCAA-----ATATA----T------------------------------------TAATACCGAATTGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CAA-------CATACA-------------------------------------AT----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCAAAATAAAT----ATTCAATATCAAAAAATATAAACCTT--ATACAGATGGTGGCATGGGCGTTCCTGGTGGCAGAATGGGTAAGTATT--------ACACAGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................CAGCTCCTTTCTGGATAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCTGGTGGCAGAATGG.........................2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGGCATGGGCGTTCC.......................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCATGGGCGTTCCTGGT...................................2011.00100000010000
.......................CCTTTCTGGATAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..............ATCTCAGCTCCTTTCTGGATAAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGGCGTTCCTGGTGGCA...............................2111.00101000000000
..............................................................................................................................................................................................................................................................................................GC-GAACG-TTTGGCTT--CATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
droEre2
CAATTCTACATTCAATCTCAGCTCCTTTCTGGATAAAGGAACTGTACAAGGTATAACGAAGCGTCCCT--T--T-T-----------AAATGT--CC--AAAAT--TTGCTTC---AAACGCAT--CGACGA--TTTAATCGAT--------TACCTTTTA-TAAATTATTAA------------CT-AATGCCTATAT-TTTGAT-------CATTCCTCT-----------------C----------TCATTCTCTCA-TTCAACTCATACGAATGCTG---CGC-GAACG-TTTGGCTT--CTTCAT-TGTACT-TTTAT-----TTA----A------TT-------AAC---AATTTCTAAA--CCAA-----AAATA----T------------------------------------TAATATCGAAATGCG-CTGCTTAC---TGAC--C-------TA---------CATA-CCA-------CACACA-------------------------------------AT----ATGCTGGCTAACA-----------------------------ACAAC---------TTGAAAAA-------TGC-----AATTA-----------------------------TCCGAACTAAAT----ATTTAAAATCAAACAATATAAACCTT--ATACAGATGGTGGCATGGGAGTTCCTGGTGGCAGAATGGGTGAGTATT--------ATACAGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGGGAGTTCCTGGTGGC................................2111.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCGAAATGCG-CTGCTTAC---TGAC--................................................................................................................................................................................................................................................................................................................2611.0010000010
........................CTTTCTGGATAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCTGGTGGCAGAATGG.........................2011.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGTGGCAGAATGGGT.......................1911.0011000000
.AATTCTACATTCAATCTCAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..............ATCTCAGCTCCTTTCTGGATAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
dp5
CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAAAGATATTGCCCT--T--AACTAATGCTCAAAAAAT--CCCACT-AAC---CA-TT------------T--CCATTA--TTTGAACCAAAACAAAATGC---ATAT-AAATTTATAAA------------AT-AAAGCTTACAT-TCTGT---------ATTCCTCT-----------------CTCTC---TT-TCCTTCT----------CTC------ATGCTG---CGC-AAACG-TTTGGCTTTTACTCATTTCTCAT-TTTTT-----TTG----T------TT--------AC-ATA--CTTTTAA--CAA---------AATTAATTAAAATTCTTAACAA---------------------AAATACCAAAATGCG-TCGCTTAC---TCAC--AAAAACAATA---------CATG-CAA-------CATACAACAA-------------------------------C-AT----TTGCTGGCTAACA-----------------------------A---C---------TCGAA--T--CGAAATACTACAAAAATA-----------------------------TCAAAACTAAAT----ATTCCAAA---------------------AGCAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------TTGCAACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCAGGTGGCAGAATG..........................1811.0010100000000
...........TCAATCTCAGCTCCTTTCTGGACAAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
............................CTGGACAAAGGAACTGTGCAAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
.............................TGGACAAAGGAACTGTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTCCAGGTGGCAGA.............................2011.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCAGGTGGCAGAATG..........................2411.0010100000000
droPer2
CAATTCTACATTCAATCTCAGCTCCTTTCTGGACAAAGGAACTGTGCAAGGTATAAAGATATTGCCCT--T--AACTAATGCTCAAAAAAT--CCCACT-AAC---CATTTCC---ATATCCATTTCCATTA--TTTGAACCAAAACAAAATGC---ATAT-AAATTTATAAA------------AT-AAAGCTTACAT-TCTGT---------ATTCCTCT-----------------CTCTC---TT-TCCTTCT----------CTC------ATGCTG---CGC-AAACG-TTTGGCTTTTACTCATTTCTCAT-TTTTTTTTTTTT----------------------AC-ATA--CTTTTAA--CAA---------AATTAATTAAAATTCTTAACAA---------------------AAATACCAAAATGCG-TCGCTTAC---TCAC--AAAAACAATA---------CATG-CAA-------CATACAACAA-------------------------------C-AT----TTGCTGGCTAACA-----------------------------A---C---------TCGAA--T--CGAAATACTACAAAAATA-----------------------------TCAAAACTAAAT----ATTCCAAA---------------------AGCAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATA--------TTGCAACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................TTTCTGGACAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.006600000
..................................AAAGGAACTGTGCAAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................CTTTCTGGACAAAGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGGTGGCAGAATGGGTGAGTAT.................2611.001000001
..........................................................................................................................................................................................................TGT---------ATTCCTCT-----------------CTCTC---TT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
droWil2
AAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------CT-AATGCTTATTT-----ATCATTCTATATCTATAT-----------------CTATT---CTG--A---------TTCTTCTCTGATGAATGCTGCTGCGC-GTGTG-TTTGGCTTT-AATCATTTGTTTC-TATTTTTTTTTTGTATAA------TT-------AATA-CACCTTTTAAA--TAA---------AA----T------------------------------------TAAT-----ATGGCG-CTGCTTAC---TTAC--A-------CT---------CATT-CTC--AACTATAAA--AAATCA--------------------------------------------------------------------------------------------CATTT-AAATA------------------TTATTTATGAAC----TTAAATAATGTCG---------TAT----CAAT-AAATC---------GAATCAA--ATACAGATGGTGGCATGGGAGTTCCAGGTGGCAGAATGGGTGAGTATT--------A---AGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAA--ATACAGATGGTGGCATGGGA............................................2511.00101000
droVir3
ACTAC------------TTAACTAT-ATTTG-A-AATTGAATATTACATGG---------------------------------------------------------------------------------------------------------------------------------------------CTTACCA-TATCTT-------TTTTCTCTTCTCTTTCTATTTTCACTCATTTTATTCG--A---------ATAATCACATGTGAATGCTG---CGAATTGCG-TTTGGCTT--ATTCATTTGTGTA-TTCGT-----TCT----A------AT-------GATAACATT-TC--------------------------------------AATAAT-ATATTGTGCCTCAAATTTAAACTAAATTGCG-CTGCTTAC---ACAT--A-------CACAAACGCAA-----ACA-------CACAC--AAACACATA----------------------AAA---TAAAT---CTAATTATTAATAACTTTGAAATTCATTCCTAATAC---------------------------------------------------------ATATATAAAAA-AAACATATAAATAATAT----ATGCAAATGCGAA--TTATGAACCTATACTGCAGATGGTGGCATGGGCATTCCGGGTGGCAGAATGGGTGAGTATTTGTTTCAAAAACAGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGGTGGCAGAATGGGT.......................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGGGCATTCCGGGT...................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGGGTGGCAGAATGG.........................1811.001001000000000000000000000000000000000000000000000000000000000000
.CTAC------------TTAACTAT-ATTTG-A-AATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGCATGGGCATTCCG......................................1911.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................ATGCTG---CGAATTGCG-TTTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----ACA-------CACAC--AAACACATA----------------------........................................................................................................................................................................................................................................1940.251001000000000000000000000000000000000000000000000000000000000000
droMoj3
ACTATTTA------------ACT-----------------------------------------------------------------------------------TTG------------------------------------------------------------TTATACAAATATAATATTACATGCTTCTCCCTCTGCT-------CTTCTCT------------------------------TTATGCTCTCA-CT---CACACTTGAATGCTG---CGAATCGCG-TTTGGCCT--ATTCATTTGTGTAATTCGT-----TCT----A------AT-------GATAACATT-G--AAA--TAAT-----AAC--------------------AATAATAATACTGTGCCTCGACTATCAACTAAAACGCG-CTGCTTAC---TCAC--A-------TACAAACACAC-----TCA-------CACAC--ATATACATGTAAAATCAAAAATTCATATATAAAACATC----ATTCTTAATA----------------------------TATAAAAAT---ATA----------------------------------------------TATATGAA-AAATATATAAATAATAT----ATGC-AATGCGAA--TTATGAACCTATACTACAGATGGTGGCATGGGCGTTCCAGGTGGCAGAATGGGTGAGTATT----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................ATGCTTCTCCCTCTGCT-------CTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCGTTCCAGGTGGCAGA.............................2111.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCATGGGCGTTCCAGGT...................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGCATGGGCGTTCCAGGTGGC................................2611.001100000
droGri2
TCTCTC------------------ATTTTTGACTCAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACATGTGAATGCTG---CGA-TTGCGATTTGGCTT--ATTCATTTGTGTA-TTCGT-----TCT----A------AT-------GATAACATT-TC--------------------------------------AATAATAATATTGCGCCTCGAATTTGAACTGCAATGCGACTGCTTAC---TCAC--A-------CA---------AACA-C----------ACA----------------------------------TAA---TCAAT---CTAATCCTAATTAATTTTGAAAATCATTCCTAATTT---------------------------------------------ATACCTATAAACATATTTAAACATAAACG---------TAT----CTGCAATTGCGAA--TTATGAACCTATACTACAGATGGTGGCATGGGCGTTCCAGGTGGGAGAATGGGTGAGTATT--------TTTGATAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGTGGCATGGGCGTTCCA......................................2211.00101
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGTGGCATGGGCGTTCCAGGTG..................................2611.00101

Generated: 05/18/2015 at 05:44 AM