ID:

dan_2843

 Coordinate:

scaffold_13340:1254591-1254741 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.7 -14.1 -14.1

Flybase annnotation

exon [dana_GLEANR_18814:2]; CDS [Dana\GF17551-cds]; intron [Dana\GF17551-in]

No Repeatable elements found

mature
  1. scaffold_8665:2020-2042 -
  2. scaffold_12911:36281-36303 -
  3. scaffold_12926:197391-197413 -
  4. scaffold_13034:490474-490496 -
  5. scaffold_13089:430130-430152 -
  6. scaffold_13089:440413-440435 -
  7. scaffold_13099:1192499-1192521 -
  8. scaffold_13099:1214813-1214835 -
  9. scaffold_13137:1119328-1119350 -
  10. scaffold_13225:1294-1316 -
  11. scaffold_13248:4372077-4372099 -
  12. scaffold_13333:537071-537093 -
  13. scaffold_13333:539997-540019 -
  14. scaffold_13333:568830-568852 -
  15. scaffold_13337:16845251-16845273 -
  16. scaffold_13337:21479797-21479819 -
  17. scaffold_13339:1056947-1056969 -
  18. scaffold_13340:11241642-11241664 -
  19. scaffold_13417:3285327-3285349 -
  20. scaffold_13767:1507809-1507831 -
  21. scaffold_7753:2088-2110 +
  22. scaffold_8868:576-598 +
  23. scaffold_12956:7076-7098 +
  24. scaffold_13034:259837-259859 +
  25. scaffold_13034:778057-778079 +
  26. scaffold_13045:911482-911504 +
  27. scaffold_13045:914538-914560 +
  28. scaffold_13045:1244911-1244933 +
  29. scaffold_13070:45855-45877 +
  30. scaffold_13137:399299-399321 +
  31. scaffold_13137:808804-808826 +
  32. scaffold_13258:427307-427329 +
  33. scaffold_13258:543294-543316 +
  34. scaffold_13260:215343-215365 +
  35. scaffold_13260:217215-217237 +
  36. scaffold_13266:8581086-8581108 +
  37. scaffold_13266:8591239-8591261 +
  38. scaffold_13266:8595567-8595589 +
  39. dan_2843  scaffold_13340:1254629-1254651 +
  40. scaffold_13417:6793581-6793603 +
star
  1. scaffold_8868:614-640 +
  2. scaffold_12916:10432073-10432099 +
  3. scaffold_12916:10442528-10442554 +
  4. scaffold_13045:911520-911546 +
  5. scaffold_13045:914576-914602 +
  6. scaffold_13045:1241105-1241131 +
  7. scaffold_13077:457918-457944 +
  8. scaffold_13137:806915-806941 +
  9. scaffold_13230:166974-167000 +
  10. scaffold_13239:174058-174084 +
  11. scaffold_13260:215381-215407 +
  12. scaffold_13266:8573624-8573650 +
  13. scaffold_13266:8591277-8591303 +
  14. scaffold_13337:6310460-6310486 +
  15. scaffold_13339:1230546-1230572 +
  16. scaffold_13339:1240345-1240371 +
  17. dan_2843  scaffold_13340:1254667-1254693 +
  18. scaffold_13340:10718139-10718165 +
  19. scaffold_13340:10723402-10723428 +
  20. scaffold_13417:6793619-6793645 +
  21. scaffold_12956:7114-7140 +
  22. scaffold_13016:10018-10044 +
  23. scaffold_13034:259875-259901 +
  24. scaffold_13034:778095-778121 +
  25. scaffold_13045:1244949-1244975 +
  26. scaffold_13137:399337-399363 +
  27. scaffold_13137:808842-808868 +
  28. scaffold_13230:2775948-2775974 +
  29. scaffold_13258:543332-543358 +
  30. scaffold_13260:217253-217279 +
  31. scaffold_13266:8581124-8581150 +
  32. scaffold_13266:8595605-8595631 +
  33. scaffold_13417:5264336-5264362 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGTTAATATCCAAGATGATCACCAGCAGATGATGCATTTGCTTCAAAAGCGAGTGTTCAAGCATTGAACACGATAAGAATTCCAAACATAGAATGTAGGAGATCGGACCCATGTGAATAAGTGATTAACAGCATGGTTTGAAAGACGATCTCCTGCAGTCTAACCAAATATTTATGTGGTGCACTTGAAGCACTTAAGAAAGGGTCACATACCATGTCAGCGTGCAGTCCGTTGATAAGTAGTTTTAAAT
****************************************************************************************...........(((((((...((((((...(((....)))...)))))).........)))))))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V106
head
 V055
head
........................................................................................ATAGAATGTAGGAGATCGGACCC............................................................................................................................................ 23 0 20 0.85 17 17 0 0 0 0 0
.......................................................................................................TCGGACCCATGTGAATAAGTGATTAAC......................................................................................................................... 27 0 20 0.75 15 15 0 0 0 0 0
................................................................TTGAACACGATAAGAATTCCAAAC................................................................................................................................................................... 24 0 20 0.75 15 15 0 0 0 0 0
.......................................................................CGATAAGAATTCCAAACATAGAATGT.......................................................................................................................................................... 26 0 20 0.75 15 15 0 0 0 0 0
.................................................................................TCCAAACATAGAATGTAGGAGATCGGACC............................................................................................................................................. 29 0 20 0.70 14 14 0 0 0 0 0
....................................................................................................................................................................................TGCACTTGAAGCACTTAAGAAAGGG.............................................. 25 0 20 0.50 10 10 0 0 0 0 0
..............................................................................................................................TAACAGCATGGTTTGAAAGACGATCTC.................................................................................................. 27 0 20 0.50 10 6 3 1 0 0 0
.................................................................TGAACACGATAAGAATTCCAAAC................................................................................................................................................................... 23 0 20 0.35 7 7 0 0 0 0 0
.....................................................................................................................................ATGGTTTGAAAGACGATCTCCTGC.............................................................................................. 24 0 20 0.20 4 4 0 0 0 0 0
...................................................................AACACGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 27 0 20 0.20 4 4 0 0 0 0 0
..............................................................................................................................TAACAGCATGGTTTGAAAGACGATCT................................................................................................... 26 0 20 0.20 4 4 0 0 0 0 0
..........................................................................TAAGAATTCCAAACATAGAATGTA......................................................................................................................................................... 24 0 20 0.20 4 4 0 0 0 0 0
....................................................................................................................................................................................TGCACTTGAAGCACTTAAGAAAGG............................................... 24 0 20 0.20 4 4 0 0 0 0 0
.....................................................................CACGATAAGAATTCCAAACATAGAATGT.......................................................................................................................................................... 28 0 20 0.20 4 4 0 0 0 0 0
.....................................................................CAAGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 25 1 20 0.20 4 4 0 0 0 0 0
......................................................................................ACATAGAATGTAGGAGATCGGACC............................................................................................................................................. 24 0 20 0.20 4 4 0 0 0 0 0
.....................................................................CACGATAAGAATTCCAAACATAGAAC............................................................................................................................................................ 26 1 20 0.20 4 4 0 0 0 0 0
....................................................................................................................................CATGGTTTGAAAGACGATCTCCTGCA............................................................................................. 26 0 20 0.15 3 0 3 0 0 0 0
...........................................................................AAGAATTCCAAACATAGAATGTAGGAGA.................................................................................................................................................... 28 0 20 0.15 3 1 2 0 0 0 0
....................................................................ACACGATAAGAATTCCAAACATAGAATG........................................................................................................................................................... 28 0 20 0.15 3 3 0 0 0 0 0
.................................................................................TCCAAACATAGAATGTAGGAGATCGGAC.............................................................................................................................................. 28 0 20 0.15 3 3 0 0 0 0 0
...........................................................................................................................GATTAACAGCATGGTTTGAAAGACGATC.................................................................................................... 28 0 20 0.15 3 2 1 0 0 0 0
.................................................................TGAACACGATAAGAATTCCAAACAT................................................................................................................................................................. 25 0 20 0.15 3 3 0 0 0 0 0
....................................................................................AAACATAGAATGTAGGAGATCGGA............................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0 0
...............................................................................................................................................................TCTAACCAAATATTTATGTGGTGCACT................................................................. 27 0 20 0.15 3 3 0 0 0 0 0
........................................................................................ATAGAATGTAGGAGATCGGACCCA........................................................................................................................................... 24 0 20 0.15 3 0 3 0 0 0 0
..........................................................................TAAGAATTCCAAACATAGAATGTAGG....................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0
..........................................................................................................................................................TTCAGTCTAACCAAATATTTATGTGG....................................................................... 26 1 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................ATGGTTTGAAAGACGATCTCCTGCAG............................................................................................ 26 0 20 0.10 2 0 2 0 0 0 0
.....................................................................TACGATAAGAATTCCAAACATAGAATG........................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0
...................................................................................................................GGATAAGTGATTAACAGCATGGT................................................................................................................. 23 1 20 0.10 2 2 0 0 0 0 0
....................................................................ACACGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0
......................................................................ACGATAAGAATTCCAAACATAGA.............................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0
...............................................................................ATTCCAAACATAGAATGTAGGAGATCGG................................................................................................................................................ 28 0 20 0.10 2 0 2 0 0 0 0
...................................................................................................................GAATAAGTGATTAACAGCATGGTT................................................................................................................ 24 0 20 0.10 2 1 1 0 0 0 0
..........................................................................................................................................................TGCAGTCTAACCAAATATTTATGTGG....................................................................... 26 0 20 0.10 2 0 0 2 0 0 0
.............................................................................................................................TTAACAGCATGGTTTGAAAGACGA...................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0
...............................................................................................................................................................TCTAACCAAATATTTATGTGG....................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................GATCGGACCCATGTGAATAAGTGATT............................................................................................................................ 26 0 20 0.10 2 1 0 0 1 0 0
......................................................................................ACATAGAATGTAGGAGATCGGACCC............................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0
.....................................................................CAAGATAAGAATTCCAAACATAGA.............................................................................................................................................................. 24 1 20 0.10 2 2 0 0 0 0 0
..................................................................GAACACGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 28 0 20 0.10 2 2 0 0 0 0 0
...........................................................................AAGAATTCCAAACATAGAATGTAGGA...................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
......................................................................................................................................TGGTTTGAAAGACGATCTCCTGC.............................................................................................. 23 0 20 0.10 2 0 2 0 0 0 0
.................................................................................................................................................................................................................ATACCATGTCAGCGTGCAGTCCGTTG................ 26 0 20 0.10 2 0 2 0 0 0 0
.................................................................................TCCAAACATAGAATGTAGGAGATCGG................................................................................................................................................ 26 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................................................................................................................................TACCATGTCAGCGTGCAGTCC.................... 21 0 20 0.10 2 0 2 0 0 0 0
......................................................................................................ATCGGACCCATGTGAATAAGT................................................................................................................................ 21 0 20 0.10 2 0 2 0 0 0 0
.................................................................................................................................................................TAACCAAATATTTATGTGGTGCACT................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
......................................................................................................................................TGGTTTGAAAGACGATCTCCTG............................................................................................... 22 0 20 0.10 2 0 2 0 0 0 0
............................................................................AGAATTCCAAACATAGAATGTAGGAGA.................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0 0
.............................................................................................................................TTAACAGCATGGTTTGAAAGACGATCTC.................................................................................................. 28 0 20 0.10 2 0 0 2 0 0 0
..........................................................................................................................TGATTAACAGCATGGTTTGAAAGACGATC.................................................................................................... 29 0 20 0.10 2 0 2 0 0 0 0
.....................................................................CACGATAAGAATTCCAAACATAT............................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0
...................................................................................CAAACATAGAATGTAGGAGATCGGA............................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0
....................................................................................AAACATAGAATGTAGGAGATCGGAC.............................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................AGACGATCTCCTGCAGTCTAAC...................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................GCATGGTTTGAAAGACGATCTCCT................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
.............................................................................GAATTCCAAACATAGAATGTAGG....................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
....................................................................................AAACATAGAATGTAGGAGATC.................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 1
..............................................................................................................................TAACAGCATGGTTTGAAAGACGA...................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
.........................................................................ATAAGAATTCCAAACATAGAATGTTG........................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................GAATTCCAAACATAGAATGTAGGAGAC................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................TGTCGGCGTGCAGTCCGTTGA............... 21 1 20 0.05 1 0 0 0 0 1 0
..........................................................................TAAGAATTCCAAACATAGAATG........................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
........................................................................................ATAGAATGTAGGAGATCGGACCCATG......................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................AAGTGATTAACAGCATGGTTTGAAAGAC........................................................................................................ 28 0 20 0.05 1 0 1 0 0 0 0
................................................................................................TAGGAGATCGGACCCATGTGAATAAG................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................TAGAATGTAGGAGATCGGACC............................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................GAAAGACGATCTCCTGCAGTCTAAC...................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................CTTAAGAAAGGGTCACATACCATGTCA............................... 27 0 20 0.05 1 0 1 0 0 0 0
...........................................................................AAGAATTCCAAACATAGAATGTAG........................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ATACCATGTCAGCGTGCAGTC..................... 21 0 20 0.05 1 0 0 0 1 0 0
......................................................................................................................................................CTCCTGCAGTCTAACCAAATATTTATGC......................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ATACCATGTCAGCGTGCAG....................... 19 0 20 0.05 1 0 0 0 1 0 0
....................................................................................................................................................ATCTCCTGCAGTCTAACCAAATATTTA............................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................TCACATACCATGTCAGCGTGCAG....................... 23 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................TAAGTGATTAACAGCATGGTTTGAAAG.......................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
...............................................................ATTGAACACGATAAGAATTCCAAACATA................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
......................................................................ACGATAAGAATTCCAAACATAGCATG........................................................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0
..............................................................................................TGTAGGAGGTCGGACCCATGTGAA..................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
.............................................................................GAATTCCAAACATAGAATGTAGGA...................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................TAACCAAATATTTATGTGGTGCACC................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
................................................................TTGAACACGATAAGAATTCCAAACATA................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
........................................................TTCAAGCATTGAACACGATA............................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
............................................................................AGAATTCCAAACATAGAATGTAGGA...................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.................................................................................TCCAAACATAGAATGTAGGAGATCG................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................AAACATAGAATGTAGGAGATCGGACC............................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................................ACATACCATGTCAGCGTGCAG....................... 21 0 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................................TGAAAGACGATCTCCTGCAGT........................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................GGTTAACAGCATGGTTTGAAAGACGAT..................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
........................................................TTCAAGCATTGAACACGATAAGA............................................................................................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................GTAGGAGATCGGACCCATGTGAATC................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................TCCAAACATAGAATGTAGGAGATCCG................................................................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
.............................................................................................ATGTAGGAGATCGGACCCATGT........................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................TGAATAAGTGATTAACAGCATGGT................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
.................................................................TGAACACGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 29 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TACCATGTCAGCGTGCAGTCCGTT................. 24 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................CAGCATGGTTTGAAAGACGATCTCCTG............................................................................................... 27 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................TGTAGGAGGTCGGACCCATG......................................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................CATAGAATGTAGGAGATCGGACCC............................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CCATGTCAGCGTGCAGTCC.................... 19 0 20 0.05 1 0 1 0 0 0 0
.....................................................................CACGATAAGAATTCCAAACATAGAATGTA......................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0 0
.....................................................................CGCGATAAGAATTCCAAAC................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................CATACCATGTCAGCGTGCAGT...................... 21 0 20 0.05 1 0 0 0 0 1 0
.................................................................................................AGGAGATCGGACCCATGTGAATAAG................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
.....................................................................CACGATAAGACTTCCAAACATCGAAT............................................................................................................................................................ 26 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................AACAGCGTGGTTTGAAAGACGATCTCCT................................................................................................ 28 1 20 0.05 1 0 0 0 1 0 0
..................................................................GGACACGATAAGAATTCCAAAC................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................AAAATGTAGGAGATCGGACC............................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0
..........................................................................TAAGAATTCCAAACATAGAATCTA......................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................GACCCATGTGAATAAGTGAT............................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................CTCCAGTCTAACCAAATATTTATGTG........................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................CAAATATTTATGTGGTGCACTTGA.............................................................. 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................TAAGAAAGGGTCACATACCATGTCAGCG............................ 28 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TACCATGTCAGCGTGCAGTCCGTTG................ 25 0 20 0.05 1 0 1 0 0 0 0
....................................................................................AAACATAGAATGTAGGAGATCGTACC............................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................AAGCACTTAAGAAAGGGTCACAT........................................ 23 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................CTTGAAGCACTTAAGAAAGGGTC............................................ 23 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTGAAGCACTTAAGAAAGGG.............................................. 20 0 20 0.05 1 0 0 0 1 0 0
.....................................................................................AAAATAGAATGTAGGAGATCGGACCC............................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................GGGTCACATACCATGTCAGCGTGC......................... 24 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................AAAGGGTCACATACCATGTCAGCGT........................... 25 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................AGTTATGTGGTGCACTTGAA............................................................. 20 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................GTTTGAAAGACGATCTCCTGCAGTCTAA....................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................CAAATATTTATGTGGTGCACTTGAA............................................................. 25 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................TAAGTGATTAACAGCATGGTTTGAAAGAC........................................................................................................ 29 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................GCATGGTTTGAAAGACGATCTCCTGC.............................................................................................. 26 0 20 0.05 1 0 0 1 0 0 0
...............................................................................................GTAGGAGATCGGACCCATGTGAATA................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................................GCGTGCAGTCCGTTGATAAGTAG........ 23 0 20 0.05 1 0 0 0 1 0 0
..................................................................................................GGAGATCGGACCCATGTGAA..................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................GAATAAGTGATTAACAGCATGGTTT............................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................ATGTGAATAAGTGATTAACAGCATG................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................CTGCAGTCTAACCAAATATTTATCTGGTG..................................................................... 29 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................TGTTGGAGATCGGACCCATGTGAATA................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
....................................................................................AAACATAGAATGTAGGAGAT................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 1
................................................................TGGTACACGATAAGAATTCCAAACATA................................................................................................................................................................ 27 2 20 0.05 1 1 0 0 0 0 0
..........................................................................TAAGAATTCCAAACATAGAATGTAGGAG..................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTGAAGCACTTAAGAAAGGGTC............................................ 22 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................TCGGACCCATGTGAATAAGTG............................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................AACATAGAATGTAGGAGATCGGACC............................................................................................................................................. 25 0 20 0.05 1 0 0 1 0 0 0
............................................................................................................................................GAAAGACGATCTCCTGCAGTCT......................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0
..................................................................GAACACGATAAGAATTCCAAAC................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................AAATATTTATGTGGTGCACT................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
............................................................................................AATGTAGGAGATCGGACCCATGTGA...................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.........................................................TCAAGCATTGAACACGATAAGAATTCC....................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................CACATACCATGTCAGCGTGCAGTCC.................... 25 0 20 0.05 1 0 0 0 1 0 0
........................................................................................................CGGACCCATGTGAATAAGTG............................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.....................................................................CACGATAAGAATTCCAAACAT................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................TCTCCTGCAGTCTAACCAAAT................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
.................................................................................TCCAAACATAGAATGTAGGAGATCGGA............................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................CAGCATGGTTTGAAAGACGATCT................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.......................................................................CGATAAGAATTCCAATCATAGAATGT.......................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
........................................................TGCTAGCATTGAACACGATA............................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
.......................................................................CGATAAGAATTCCAAACATAGAATG........................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
...........................................................................AACAATTCCAAACATAGAATGTAGG....................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................GTGAATAAGTGATTAACAGCATGGT................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................................GGGTCACATACCATGTCAGCGTGCAGTC..................... 28 0 20 0.05 1 0 0 0 0 1 0
................................................................................................TAGGAGATCGGACCCATGTG....................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................TAGAATGTAGGAGATCGGACCC............................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
.....................................................................TGCGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................TGAATAAGTGATTAACAGCATG................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
...................................................................ATCACGATAAGAATTCCAAACATAGAA............................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
.............................................................................GAATTCCAAACATAGAATGTAGCACA.................................................................................................................................................... 26 2 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................CATGGTTTGAAAGACGATC.................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................TATTTATGTGGTGCACTTGAAGC........................................................... 23 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................TGCACTTGAAGCACTTAAGA................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................GGTTTGAAAGACGATCTCCTGC.............................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
............................................................AGCATTGAACACGATAAGA............................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................AAGAATTCCAAACATAGAATGT.......................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
..........................................................................TAAGAATTCCACACATAGAATGTA......................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................GGAACATACCATGTCAGCGTGCAGC...................... 25 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ACCAATTATAGGTTCTACTAGTGGTCGTCTACTACGTAAACGAAGTTTTCGCTCACAAGTTCGTAACTTGTGCTATTCTTAAGGTTTGTATCTTACATCCTCTAGCCTGGGTACACTTATTCACTAATTGTCGTACCAAACTTTCTGCTAGAGGACGTCAGATTGGTTTATAAATACACCACGTGAACTTCGTGAATTCTTTCCCAGTGTATGGTACAGTCGCACGTCAGGCAACTATTCATCAAAATTTA
**************************************************************************************************...........(((((((...((((((...(((....)))...)))))).........)))))))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V055
head
 V105
male body
........................................................................................................................................CAAACTTTCTGCTAGAGGACGTCAGAT........................................................................................ 27 0 20 5.35 107 107 0 0 0 0
................................................................................................................................................................................................................................CGTCAGGCAACTATTCATCAAAATT.. 25 0 20 5.30 106 106 0 0 0 0
.......................................................................................................AGCCTGGGTACACTTATTCACTAAT........................................................................................................................... 25 0 20 1.90 38 0 38 0 0 0
................................................................................................................................................................................................................................CGTCAGGCAACTATTCATCAAAATTTA 27 0 20 0.60 12 12 0 0 0 0
.................................................................................................................................................TGCTAGAGGACGTCAGATTGGTTT.................................................................................. 24 0 20 0.50 10 0 0 10 0 0
..........................................................................................................................ACTAATTGTCGTACCAAACTTTCTGCT...................................................................................................... 27 0 20 0.45 9 9 0 0 0 0
............................................................................................................................TAATTGTCGTACCAAACTTTCTGCT...................................................................................................... 25 0 20 0.40 8 8 0 0 0 0
...........................................................................................................................................................................................................................TCGCACGTCAGGCAACTATTCATCAAAAT... 29 0 20 0.30 6 6 0 0 0 0
..........................................................................................................................................................................................................CCCAGTGTATGGTACAGTCGCACGT........................ 25 0 20 0.30 6 3 3 0 0 0
.................................................................................................................................................................ATTGGTTTATAAATACACCACGTGAACTT............................................................. 29 0 20 0.25 5 5 0 0 0 0
.........................................................................................................................................AAACTTTCTGCTAGAGGACGTCAGATT....................................................................................... 27 0 20 0.25 5 5 0 0 0 0
.....................................................................GTGCTATTCTTAAGGTTTGTATCTTACAT......................................................................................................................................................... 29 0 20 0.20 4 0 4 0 0 0
..................................................................................................................................................GCTAGAGGACGTCAGAGTGGTTTAT................................................................................ 25 1 20 0.20 4 0 4 0 0 0
........................................................................................................................CCACTAATTGTCGTACCAAACTT............................................................................................................ 23 1 20 0.20 4 4 0 0 0 0
.......................................................................................................................................................AGGACGTCAGATTGGTTTATAAATACAC........................................................................ 28 0 20 0.20 4 0 4 0 0 0
....................................................................................................................................................................................................................GGTACAGTCGCACGTCAGGCAACTAT............. 26 0 20 0.20 4 2 0 2 0 0
........................................................................................................................CCACTAATTGTCGTACCAAACTTTCTG........................................................................................................ 27 1 20 0.20 4 4 0 0 0 0
.................................................CGCACAAAAGTTGGTAACTT...................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0
...............................................................................................................................................TCTGCTAGAGGACGTCAGAT........................................................................................ 20 0 20 0.15 3 0 0 3 0 0
.................................................................................................................................................................................................................................GTCAGGCAACTATTCATCAAAAT... 23 0 20 0.15 3 0 3 0 0 0
.................................................................................................................................................TGCTAGAGGACGTCAGATTGGTTTATAA.............................................................................. 28 0 20 0.15 3 3 0 0 0 0
.......................................................................................................AGCCTGGGTACACTTATTCACTAATT.......................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0
........................................................................................................................................................................................................TTCCCAGTGTATGGTACAGTCGCACGT........................ 27 0 20 0.15 3 0 3 0 0 0
.....................................................................................................................................TACCAAACTTTCTGCTAGAGGACGTCAG.......................................................................................... 28 0 20 0.15 3 0 3 0 0 0
..................................................................................................................................................GCTAGAGGACGTCAGATTGGTTT.................................................................................. 23 0 20 0.10 2 0 2 0 0 0
...........................................................................................................................................ACTTTCTGCTAGAGGACGTCAGAT........................................................................................ 24 0 20 0.10 2 0 0 2 0 0
................................................................................................................................................................................................................................CGTCAGGCAACTATTCATCAAAATCT. 26 1 20 0.10 2 2 0 0 0 0
............................................................................................................................................CTTTCTGCTAGAGGACGTCAGATT....................................................................................... 24 0 20 0.10 2 0 0 2 0 0
...............................................................TAACTTGTGCTATTCTTAAGGTTTGTA................................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
............................................................TCGTAACTTGTGCTATTCTTAAGGTT..................................................................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0
..................................................................................................................................................GCTAGAGGACGTCAGATTGGT.................................................................................... 21 0 20 0.10 2 0 2 0 0 0
........................................................................................................................................CAAACTTTCTGCTAGAGGACGTCAGTT........................................................................................ 27 1 20 0.10 2 2 0 0 0 0
................................................................................................................................................CGGCTAGAGGACGTCAGATTGGTT................................................................................... 24 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................CCCAGTGTATGGTACAGTCGCAATT........................ 25 2 20 0.05 1 1 0 0 0 0
................................................................................................................ACACTTATTCACTAATTGTCGCAC................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
......................................................ACAAGTTCGTAACTTGTGCTATTC............................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................ACTTCGTGAATTCTTTCCCAGTGTAT....................................... 26 0 20 0.05 1 0 1 0 0 0
..................................................................................................CCTCTAGCCTGGGTACACTTATCCA................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................ACAGTCGCACGTGAGGCAACT............... 21 1 20 0.05 1 0 1 0 0 0
.....................................................................................................TTAGCCTGGGTACACGTATTCACT.............................................................................................................................. 24 2 20 0.05 1 0 1 0 0 0
.............................................................................................................................AATTGTCGTACCAAACTGTCTGCTAG.................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................TCGTACCAAACTTTCTGCTAG.................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
..................................................................................................CCTCTAGCCTGGGTACACTTAGTCA................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
..................................................................................................CCTCTAGCCTGGGTACACTTATTCACG.............................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................TTCGTGAATTCTTTCCCAGTGTATGGT.................................... 27 0 20 0.05 1 1 0 0 0 0
.............................................................CGTAACTTGTGCTATTCTTAAGGTTTTT.................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0
........................................................................................................GCCTGGGTACACTTATTCACT.............................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................CGTGAATTCTTTCCCAGTGTATGGT.................................... 25 0 20 0.05 1 1 0 0 0 0
................................................................AACTCGCGCTATTCTTAAGGTTTGT.................................................................................................................................................................. 25 2 20 0.05 1 0 0 1 0 0
...........................................................................................................................................ACTTTCTGCTAGAGCACGCCAGATT....................................................................................... 25 2 20 0.05 1 0 0 1 0 0
....................................................................................................................................................CAGAGGACGTCAGATTGGTCTAT................................................................................ 23 2 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................GGTTTATAAATACACCAGGTGAACTT............................................................. 26 1 20 0.05 1 0 1 0 0 0
.......................................................................GCTATTCTTAAGGTTTGTATCTTACAT......................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.......................................................CAAGTTCGTAACTTGTGCTATTCTTA.......................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................ACTTTCTGCTAGAGGACGTCACAT........................................................................................ 24 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................CAAACTTCCGGCTAGAGGACGTCAGAT........................................................................................ 27 2 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................CTTCGTGAATTCTTTCCCAGAGTAT....................................... 25 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................TAGAGTACGTCAGATCGGTTTAT................................................................................ 23 2 20 0.05 1 1 0 0 0 0
............................................................................................................GGGTACACTTATTCACTAATTGTCTT..................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
......................................................................TGCTATTCTTAAGGTTTGTATCTTACGT......................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................................TCGCACGTCAGGCAACTATTCATCAT...... 26 1 20 0.05 1 1 0 0 0 0
......................................................ACAAGTTCGTAACTTGTGCTATTCTTC.......................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................CTTTCCCAGTGTATGGTACAGTCGC............................ 25 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................GAGGACATCAGATTGGTTTATAAATA........................................................................... 26 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................CTAGAGGAAGTCAGATTGGTTTAT................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.........................................................AGTTCGTAACTTGTGCTATTCTTAAG........................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................................TTCCCAGTGTATGGTACAGTCGCA........................... 24 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................TTGAGGACGTCAGATTGGTT................................................................................... 20 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................TGGTTTATAAATACACCACGTGAACTATA........................................................... 29 3 20 0.05 1 0 1 0 0 0
........................................................................................................................................CACACTTTCTGCTAGACGACGTCAGAT........................................................................................ 27 2 20 0.05 1 0 0 1 0 0
..............................................................................................................................................................CAGATTGGTTTATAAATACACCACG.................................................................... 25 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................GGTCCCAGTGTATGGTACAGTCGCACGT........................ 28 2 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................TTCGTGAATTCTTTCCCAGTGTATAGT.................................... 27 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................CTAGAGGACGTCAGATTGGT.................................................................................... 20 0 20 0.05 1 1 0 0 0 0
...........................................................CTCGTAACTTGTGCTATTCTTAAGG....................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
...........................................................................................CTTACATCCTCTAGCCTGGGTACACTTA.................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
....................................................................................................TCTAGCCTGGGTACACTTATTCACTAAT........................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.................................................CGCTTACAAGTTCGTTTCT....................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
..................................................................................................................................................................TTGGTTTATAAATACACCACCTG.................................................................. 23 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................ACGTCAGATTGGTTTATAAATACACCA...................................................................... 27 0 20 0.05 1 0 0 1 0 0
.....................................................................GTGCTATTCTTAAGGTTTGTGTCTT............................................................................................................................................................. 25 1 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................CACGTGAACTTCGTGAATTCTT.................................................. 22 0 20 0.05 1 1 0 0 0 0
......................................................................TGGTATTCTTCAGGTTTGT.................................................................................................................................................................. 19 2 20 0.05 1 0 0 1 0 0
..............................................................ATAACTTGTGCTATTCTTAAGGTTTGT.................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................CAGTGTATGGTACAGTCGCACGT........................ 23 0 20 0.05 1 0 1 0 0 0
........................................................................................................................TCACTAATTGTCGTACCAAACT............................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................ATTCTTTCCCAGTGTATGGTA................................... 21 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................TCTGCTAGAGGACGTCAGATTGG..................................................................................... 23 0 20 0.05 1 1 0 0 0 0
................................................................................................................ACACTTATTCACTAATTGTCGTACC.................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................TTTCTGCTAGAGGACGCCAGATGGGTT................................................................................... 27 2 20 0.05 1 0 0 1 0 0
......................................................................................................TAGCCTGGGTACACTTATTCACTAATT.......................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................GAACTTCGTGAATTCTTTCCCAGT........................................... 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................................CCGCACGTCAGGCAACTATTCATC........ 24 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTACAGTCGCACGTCAGGCAACTAC............. 26 1 20 0.05 1 0 1 0 0 0
.................................................................ACTTGTGCTATTCTTAAGGTTTGGA................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0
....................................................................TGTGCTATTCTTAAGGTTTGTAGC............................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTACAGTCGCACGTCAGGCA.................. 21 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................GACGTCAGATTGGTTTATAAATACACCGC..................................................................... 29 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................ACAGTCGCGCGTCAGGCAACTATTCATC........ 28 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................TACCAAACTTTCTGCTAGAGGACGTCA........................................................................................... 27 0 20 0.05 1 0 0 1 0 0
....................................................................................................................TTATTCACTAATTGTCGTACCAAACTTTC.......................................................................................................... 29 0 20 0.05 1 0 1 0 0 0
...........................................................................................CTTACATCCTCTAGCCTGGGTAAAC....................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
..........................................................................................................CTGGGTACACTTATTCACTAATTGTCTT..................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................ACGTCAGGCAGCTATTCATCAAAATTT. 27 1 20 0.05 1 1 0 0 0 0
..................................................................................................CCTCTATCCTAGCTACACTTATTCAC............................................................................................................................... 26 3 20 0.05 1 0 0 1 0 0
..................................................................................................................................TCGTACCAAACTTTCTGCTAGAGGAC............................................................................................... 26 0 20 0.05 1 0 0 1 0 0
.....................................................................GTGCTATTCTTAAGGTTTGTATCTT............................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................TCGGCTAGAGGCCGTCAGATTGGTTT.................................................................................. 26 2 20 0.05 1 1 0 0 0 0
..................................................................................................................................................GATAGAGGACGTCAGATTGGTTTAT................................................................................ 25 1 20 0.05 1 0 0 0 0 1
................................................................................................................................................CTGCTAGAGGACGTCCGATTGGTTGAT................................................................................ 27 2 20 0.05 1 0 0 1 0 0
................................................................................................................................................CTGCTAGAGGCCGTCAGATCGGTTTAT................................................................................ 27 2 20 0.05 1 0 0 1 0 0
................................................................................................................................................CTGCTTGAGGACCTCAGATTGGTT................................................................................... 24 2 20 0.05 1 0 0 1 0 0
............................................................TCGTAACTTGTGCTATTCTTAATG....................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................CTGCTAGAGTACGTCATATTGGTTTAT................................................................................ 27 2 20 0.05 1 0 0 1 0 0
........................................................................................................GCCTGGGTACACGTATTCACT.............................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................CCAGTGTATGGTACAGTCGCAAGT........................ 24 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTACAGTCGCACGTCAGGCAACTA.............. 25 0 20 0.05 1 0 1 0 0 0
...............................................................................TAAGGTTTGTATCTTACATCCTCTAGCGT............................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0
.....................................................................................................CTAGCCTGGGTACACTTATTCACGAAT........................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................TCTTTCCCAGTGTATGGTACAGTCGC............................ 26 0 20 0.05 1 0 1 0 0 0
.....................................................................................................CTAGCCTGGGTACACTTATTCACT.............................................................................................................................. 24 0 20 0.05 1 0 0 1 0 0
.........................................................................................................CCTGGGCACACTAATTCACTAATTGTC....................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0
..............................................................GTAACTTGTTCTATTCTTAAGGTTTGT.................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
..............................................................GTAACTTGTGCTATTCTTAAGGTTTGTA................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
...............................................................TAACTTGTGCTATTCTTAAGGTTGG................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................GTCAGGCAACTATTCATCAAA..... 21 0 20 0.05 1 0 1 0 0 0
..........................................................................................................CAGGGTACACTTATTCACTAAT........................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13340:1254541-1254791 + dan_2843 TGGTTAATATCCAAGATGATCACCAGCAG------ATGATGCATTTGCTTCAAAAGCGAGTGTTCAAGCATTGAACACG-------ATAAGAATTCCAAACATAGAATGTAGGAGATCGGACCCATGTGAATAAGTGATTAACAGCATGGTTTGAAAGACGATCTCCTGCAGTCTAAC-----CAAATATTTATGTGGTGCACTTGAAGCACTTAAGAAAGGGTCACATACCATGTCAGCGTGCAGTCCGTTGATAAGTAGTTTTAAAT
droBip1 scf7180000395868:21867-22119 - TGATCAACTTGAACGATGAACCAAG-CAGAAAAGGACGG--CATTTATCTGA--AGC---TGTTCAAGCATTGAACATTATTCTATATACAAATTCTTTAGATAGA------GGGATCGGACCCATGA-AATAAGAGACAAACAGAATGGTATAA-AACCAATCCCCTGCAGCCTAACACAAACACATACATAAGTGGTGCGCTTATCACACTCGAGAAAGGGTCGCATAGCATGTCAGCGTGCAGTGCGTTGATAAATAGTTTTAAAA
droKik1 scf7180000302472:465084-465141 + TGCTGTACGTGCAGGATGATCACAAGGAG------ATGATTCATCTTTTAGAGAAGCGAACTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453515:2131-2183 - CTGTTTCCCTCCGTAATGAGCACAAGGAG------ATGATAAATCTGTTGGAGAAACGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490579:154827-154879 - TCCTAAATTTAATAGACGATCACAAGAAG------ATGATACGTCTGTTGGAGGAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779526:27447-27499 - CACTCAATTTAATTGATGATCACAAGGAG------ATGATTCGTCTACTGGATCAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302422:6555912-6555969 - TGATTAATCTCTTAGATGACCACAAGGAG------ATGTTGCGTCTACTTGAGGAGAGAACGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412664:385-442 - TGTTCAATCTGCTAGATGATCACAAGGAG------ATGATACGAATACTTCAGGAGAGAACGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408961:745730-745782 + TGATCAATGTCCTTGAGGATCACAAAGAA------ATGCTACATCTTTTGGAACAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:17177617-17177669 + TGCTCAAACTCTTCGATGATCACAAGGAG------ATGGAACGGATACTAGAAGAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:16732581-16732632 + TGCTCCACGTCCAGGATGACTACCGGGAA------ATGCTACAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_7:809460-809511 + TGCTCCACGTCCAGGATGACTACCGGGAA------ATGCTACAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:3921087-3921138 - TGCTTCACATCCAAGATGACTACCGGGAA------GTGATACAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:7064095-7064146 - TGCTTCACGTCCAAGATGACTACCGGGAA------ATGATGCAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group4:71443-71475 + TGCTGAACATCCTGGAGGAGCACAAGGCG------ACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_130:22232-22289 - TGCTGAACATCCTGGAGGAGCACAAGGCG------ACGGCCAGGCTGTTGGAGGAGCGAACGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGGTTAATATCCAAGATGATCACCAGCAG------ATGATGCATTTGCTTCAAAAGCGAGTGTTCAAGCATTGAACACG-------ATAAGAATTCCAAACATAGAATGTAGGAGATCGGACCCATGTGAATAAGTGATTAACAGCATGGTTTGAAAGACGATCTCCTGCAGTCTAAC-----CAAATATTTATGTGGTGCACTTGAAGCACTTAAGAAAGGGTCACATACCATGTCAGCGTGCAGTCCGTTGATAAGTAGTTTTAAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................ATAGAATGTAGGAGATCGGACCC.................................................................................................................................................23200.85170170000
....................................................................................................................TCGGACCCATGTGAATAAGTGATTAAC..............................................................................................................................27200.75150150000
......................................................................TTGAACACG-------ATAAGAATTCCAAAC........................................................................................................................................................................24200.75150150000
.............................................................................CG-------ATAAGAATTCCAAACATAGAATGT...............................................................................................................................................................26200.75150150000
..............................................................................................TCCAAACATAGAATGTAGGAGATCGGACC..................................................................................................................................................29200.70140140000
......................................................................................................................................................................................................TGCACTTGAAGCACTTAAGAAAGGG..............................................25200.50100100000
...........................................................................................................................................TAACAGCATGGTTTGAAAGACGATCTC.......................................................................................................27200.5010361000
.......................................................................TGAACACG-------ATAAGAATTCCAAAC........................................................................................................................................................................23200.357070000
..................................................................................................................................................ATGGTTTGAAAGACGATCTCCTGC...................................................................................................24200.204040000
.........................................................................AACACG-------ATAAGAATTCCAAACATAGAA..................................................................................................................................................................27200.204040000
...........................................................................................................................................TAACAGCATGGTTTGAAAGACGATCT........................................................................................................26200.204040000
.......................................................................................TAAGAATTCCAAACATAGAATGTA..............................................................................................................................................................24200.204040000
......................................................................................................................................................................................................TGCACTTGAAGCACTTAAGAAAGG...............................................24200.204040000
...........................................................................CACG-------ATAAGAATTCCAAACATAGAATGT...............................................................................................................................................................28200.204040000
...................................................................................................ACATAGAATGTAGGAGATCGGACC..................................................................................................................................................24200.204040000
...........................................................................CACG-------ATAAGAATTCCAAACATAGAAC.................................................................................................................................................................26200.204040000
.................................................................................................................................................CATGGTTTGAAAGACGATCTCCTGCA..................................................................................................26200.153300000
........................................................................................AAGAATTCCAAACATAGAATGTAGGAGA.........................................................................................................................................................28200.153210000
..........................................................................ACACG-------ATAAGAATTCCAAACATAGAATG................................................................................................................................................................28200.153030000
..............................................................................................TCCAAACATAGAATGTAGGAGATCGGAC...................................................................................................................................................28200.153030000
........................................................................................................................................GATTAACAGCATGGTTTGAAAGACGATC.........................................................................................................28200.153120000
.......................................................................TGAACACG-------ATAAGAATTCCAAACAT......................................................................................................................................................................25200.153030000
.................................................................................................AAACATAGAATGTAGGAGATCGGA....................................................................................................................................................24200.153030000
............................................................................................................................................................................TCTAAC-----CAAATATTTATGTGGTGCACT.................................................................27200.153030000
.....................................................................................................ATAGAATGTAGGAGATCGGACCCA................................................................................................................................................24200.153300000
.......................................................................................TAAGAATTCCAAACATAGAATGTAGG............................................................................................................................................................26200.153030000
..................................................................................................................................................ATGGTTTGAAAGACGATCTCCTGCAG.................................................................................................26200.102200000
..........................................................................ACACG-------ATAAGAATTCCAAACATAGAA..................................................................................................................................................................26200.102020000
............................................................................ACG-------ATAAGAATTCCAAACATAGA...................................................................................................................................................................23200.102020000
............................................................................................ATTCCAAACATAGAATGTAGGAGATCGG.....................................................................................................................................................28200.102200000
................................................................................................................................GAATAAGTGATTAACAGCATGGTT.....................................................................................................................24200.102110000
.......................................................................................................................................................................TGCAGTCTAAC-----CAAATATTTATGTGG.......................................................................26200.102002000
..........................................................................................................................................TTAACAGCATGGTTTGAAAGACGA...........................................................................................................24200.102200000
............................................................................................................................................................................TCTAAC-----CAAATATTTATGTGG.......................................................................21200.102020000
..................................................................................................................GATCGGACCCATGTGAATAAGTGATT.................................................................................................................................26200.102010010
...................................................................................................ACATAGAATGTAGGAGATCGGACCC.................................................................................................................................................25200.102020000
........................................................................GAACACG-------ATAAGAATTCCAAACATAGAA..................................................................................................................................................................28200.102020000
........................................................................................AAGAATTCCAAACATAGAATGTAGGA...........................................................................................................................................................26200.102020000
...................................................................................................................................................TGGTTTGAAAGACGATCTCCTGC...................................................................................................23200.102200000
...................................................................................................................................................................................................................................ATACCATGTCAGCGTGCAGTCCGTTG................26200.102200000
..............................................................................................TCCAAACATAGAATGTAGGAGATCGG.....................................................................................................................................................26200.102200000
....................................................................................................................................................................................................................................TACCATGTCAGCGTGCAGTCC....................21200.102200000
...................................................................................................................ATCGGACCCATGTGAATAAGT.....................................................................................................................................21200.102200000
..............................................................................................................................................................................TAAC-----CAAATATTTATGTGGTGCACT.................................................................25200.102020000
...................................................................................................................................................TGGTTTGAAAGACGATCTCCTG....................................................................................................22200.102200000
.........................................................................................AGAATTCCAAACATAGAATGTAGGAGA.........................................................................................................................................................27200.102200000
..........................................................................................................................................TTAACAGCATGGTTTGAAAGACGATCTC.......................................................................................................28200.102002000
.......................................................................................................................................TGATTAACAGCATGGTTTGAAAGACGATC.........................................................................................................29200.102200000
...........................................................................CACG-------ATAAGAATTCCAAACATAT....................................................................................................................................................................23200.102020000
................................................................................................CAAACATAGAATGTAGGAGATCGGA....................................................................................................................................................25200.102200000
.................................................................................................AAACATAGAATGTAGGAGATCGGAC...................................................................................................................................................25200.051100000
............................................................................................................................................................AGACGATCTCCTGCAGTCTAAC-----......................................................................................22200.051100000
................................................................................................................................................GCATGGTTTGAAAGACGATCTCCT.....................................................................................................24200.051010000
..........................................................................................GAATTCCAAACATAGAATGTAGG............................................................................................................................................................23200.051010000
.................................................................................................AAACATAGAATGTAGGAGATC.......................................................................................................................................................21200.051000100
...........................................................................................................................................TAACAGCATGGTTTGAAAGACGA...........................................................................................................23200.051100000
..........................................................................................GAATTCCAAACATAGAATGTAGGAGAC........................................................................................................................................................27200.051010000
.......................................................................................TAAGAATTCCAAACATAGAATG................................................................................................................................................................22200.051100000
.....................................................................................................ATAGAATGTAGGAGATCGGACCCATG..............................................................................................................................................26200.051010000
....................................................................................................................................AAGTGATTAACAGCATGGTTTGAAAGAC.............................................................................................................28200.051100000
.............................................................................................................TAGGAGATCGGACCCATGTGAATAAG......................................................................................................................................26200.051010000
......................................................................................................TAGAATGTAGGAGATCGGACC..................................................................................................................................................21200.051100000
.........................................................................................................................................................GAAAGACGATCTCCTGCAGTCTAAC-----......................................................................................25200.051100000
...................................................................................................................................................................................................................CTTAAGAAAGGGTCACATACCATGTCA...............................27200.051100000
........................................................................................AAGAATTCCAAACATAGAATGTAG.............................................................................................................................................................24200.051010000
...................................................................................................................................................................................................................................ATACCATGTCAGCGTGCAGTC.....................21200.051000010
...................................................................................................................................................................CTCCTGCAGTCTAAC-----CAAATATTTATGC.........................................................................28200.051010000
...................................................................................................................................................................................................................................ATACCATGTCAGCGTGCAG.......................19200.051000010
.................................................................................................................................................................ATCTCCTGCAGTCTAAC-----CAAATATTTA............................................................................27200.051010000
...............................................................................................................................................................................................................................TCACATACCATGTCAGCGTGCAG.......................23200.051100000
...................................................................................................................................TAAGTGATTAACAGCATGGTTTGAAAG...............................................................................................................27200.051100000
.....................................................................ATTGAACACG-------ATAAGAATTCCAAACATA.....................................................................................................................................................................28200.051010000
..........................................................................................GAATTCCAAACATAGAATGTAGGA...........................................................................................................................................................24200.051010000
..............................................................................................................................................................................TAAC-----CAAATATTTATGTGGTGCACC.................................................................25200.051010000
......................................................................TTGAACACG-------ATAAGAATTCCAAACATA.....................................................................................................................................................................27200.051010000
..............................................................TTCAAGCATTGAACACG-------ATA....................................................................................................................................................................................20200.051100000
.........................................................................................AGAATTCCAAACATAGAATGTAGGA...........................................................................................................................................................25200.051100000
..............................................................................................TCCAAACATAGAATGTAGGAGATCG......................................................................................................................................................25200.051010000
.................................................................................................AAACATAGAATGTAGGAGATCGGACC..................................................................................................................................................26200.051100000
.................................................................................................................................................................................................................................ACATACCATGTCAGCGTGCAG.......................21200.051000010
........................................................................................................................................................TGAAAGACGATCTCCTGCAGT................................................................................................21200.051000010
..............................................................TTCAAGCATTGAACACG-------ATAAGA.................................................................................................................................................................................23200.051100000
............................................................................................................GTAGGAGATCGGACCCATGTGAATC........................................................................................................................................25200.051010000
..........................................................................................................ATGTAGGAGATCGGACCCATGT.............................................................................................................................................22200.051010000
...............................................................................................................................TGAATAAGTGATTAACAGCATGGT......................................................................................................................24200.051010000
.......................................................................TGAACACG-------ATAAGAATTCCAAACATAGAA..................................................................................................................................................................29200.051100000
....................................................................................................................................................................................................................................TACCATGTCAGCGTGCAGTCCGTT.................24200.051100000
..............................................................................................................................................CAGCATGGTTTGAAAGACGATCTCCTG....................................................................................................27200.051001000
....................................................................................................CATAGAATGTAGGAGATCGGACCC.................................................................................................................................................24200.051010000
......................................................................................................................................................................................................................................CCATGTCAGCGTGCAGTCC....................19200.051100000
...........................................................................CACG-------ATAAGAATTCCAAACATAGAATGTA..............................................................................................................................................................29200.051100000
..................................................................................................................................................................................................................................CATACCATGTCAGCGTGCAGT......................21200.051000001
..............................................................................................................AGGAGATCGGACCCATGTGAATAAG......................................................................................................................................25200.051100000
.......................................................................................................................GACCCATGTGAATAAGTGAT..................................................................................................................................20200.051010000
.......................................................................................................................................................................................CAAATATTTATGTGGTGCACTTGA..............................................................24200.051010000
.....................................................................................................................................................................................................................TAAGAAAGGGTCACATACCATGTCAGCG............................28200.051100000
....................................................................................................................................................................................................................................TACCATGTCAGCGTGCAGTCCGTTG................25200.051100000
..............................................................................................................................................................................................................AAGCACTTAAGAAAGGGTCACAT........................................23200.051010000
..........................................................................................................................................................................................................CTTGAAGCACTTAAGAAAGGGTC............................................23200.051010000
...........................................................................................................................................................................................................TTGAAGCACTTAAGAAAGGG..............................................20200.051000010
............................................................................................................................................................................................................................GGGTCACATACCATGTCAGCGTGC.........................24200.051010000
.........................................................................................................................................................................................................................AAAGGGTCACATACCATGTCAGCGT...........................25200.051100000
.....................................................................................................................................................GTTTGAAAGACGATCTCCTGCAGTCTAA............................................................................................28200.051100000
.......................................................................................................................................................................................CAAATATTTATGTGGTGCACTTGAA.............................................................25200.051100000
...................................................................................................................................TAAGTGATTAACAGCATGGTTTGAAAGAC.............................................................................................................29200.051100000
................................................................................................................................................GCATGGTTTGAAAGACGATCTCCTGC...................................................................................................26200.051001000
............................................................................................................GTAGGAGATCGGACCCATGTGAATA........................................................................................................................................25200.051010000
..............................................................................................................................................................................................................................................GCGTGCAGTCCGTTGATAAGTAG........23200.051000010
...............................................................................................................GGAGATCGGACCCATGTGAA..........................................................................................................................................20200.051100000
................................................................................................................................GAATAAGTGATTAACAGCATGGTTT....................................................................................................................25200.051010000
............................................................................................................................ATGTGAATAAGTGATTAACAGCATG........................................................................................................................25200.051001000
.................................................................................................AAACATAGAATGTAGGAGAT........................................................................................................................................................20200.051000100
.......................................................................................TAAGAATTCCAAACATAGAATGTAGGAG..........................................................................................................................................................28200.051010000
...........................................................................................................................................................................................................TTGAAGCACTTAAGAAAGGGTC............................................22200.051010000
....................................................................................................................TCGGACCCATGTGAATAAGTG....................................................................................................................................21200.051100000
..................................................................................................AACATAGAATGTAGGAGATCGGACC..................................................................................................................................................25200.051001000
.........................................................................................................................................................GAAAGACGATCTCCTGCAGTCT..............................................................................................22200.051001000
........................................................................GAACACG-------ATAAGAATTCCAAAC........................................................................................................................................................................22200.051010000
........................................................................................................................................................................................AAATATTTATGTGGTGCACT.................................................................20200.051010000
.........................................................................................................AATGTAGGAGATCGGACCCATGTGA...........................................................................................................................................25200.051100000
...............................................................TCAAGCATTGAACACG-------ATAAGAATTCC............................................................................................................................................................................27200.051100000
................................................................................................................................................................................................................................CACATACCATGTCAGCGTGCAGTCC....................25200.051000010
.....................................................................................................................CGGACCCATGTGAATAAGTG....................................................................................................................................20200.051010000
...........................................................................CACG-------ATAAGAATTCCAAACAT......................................................................................................................................................................21200.051010000
..................................................................................................................................................................TCTCCTGCAGTCTAAC-----CAAAT.................................................................................21200.051010000
..............................................................................................TCCAAACATAGAATGTAGGAGATCGGA....................................................................................................................................................27200.051100000
..............................................................................................................................................CAGCATGGTTTGAAAGACGATCT........................................................................................................23200.051010000
.............................................................................CG-------ATAAGAATTCCAAACATAGAATG................................................................................................................................................................25200.051100000
..............................................................................................................................GTGAATAAGTGATTAACAGCATGGT......................................................................................................................25200.051100000
............................................................................................................................................................................................................................GGGTCACATACCATGTCAGCGTGCAGTC.....................28200.051000001
.............................................................................................................TAGGAGATCGGACCCATGTG............................................................................................................................................20200.051100000
......................................................................................................TAGAATGTAGGAGATCGGACCC.................................................................................................................................................22200.051010000
...............................................................................................................................TGAATAAGTGATTAACAGCATG........................................................................................................................22200.051100000
.................................................................................................................................................CATGGTTTGAAAGACGATC.........................................................................................................19200.051010000
...........................................................................................................................................................................................TATTTATGTGGTGCACTTGAAGC...........................................................23200.051100000
......................................................................................................................................................................................................TGCACTTGAAGCACTTAAGA...................................................20200.051010000
....................................................................................................................................................GGTTTGAAAGACGATCTCCTGC...................................................................................................22200.051010000
..................................................................AGCATTGAACACG-------ATAAGA.................................................................................................................................................................................19200.051010000
........................................................................................AAGAATTCCAAACATAGAATGT...............................................................................................................................................................22200.051010000
droBip1
TGATCAACTTGAACGATGAACCAAG-CAGAAAAGGACGG--CATTTATCTGA--AGC---TGTTCAAGCATTGAACATTATTCTATATACAAATTCTTTAGATAGA------GGGATCGGACCCATGA-AATAAGAGACAAACAGAATGGTATAA-AACCAATCCCCTGCAGCCTAACACAAACACATACATAAGTGGTGCGCTTATCACACTCGAGAAAGGGTCGCATAGCATGTCAGCGTGCAGTGCGTTGATAAATAGTTTTAAAASizeHit CountTotal NormTotal
No Reads
droKik1
TGCTGTACGTGCAGGATGATCACAAGGAG------ATGATTCATCTTTTAGAGAAGCGAACTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGTTTCCCTCCGTAATGAGCACAAGGAG------ATGATAAATCTGTTGGAGAAACGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCCTAAATTTAATAGACGATCACAAGAAG------ATGATACGTCTGTTGGAGGAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CACTCAATTTAATTGATGATCACAAGGAG------ATGATTCGTCTACTGGATCAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGATTAATCTCTTAGATGACCACAAGGAG------ATGTTGCGTCTACTTGAGGAGAGAACGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGTTCAATCTGCTAGATGATCACAAGGAG------ATGATACGAATACTTCAGGAGAGAACGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGATCAATGTCCTTGAGGATCACAAAGAA------ATGCTACATCTTTTGGAACAGCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGCTCAAACTCTTCGATGATCACAAGGAG------ATGGAACGGATACTAGAAGAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............GATGATCACAAGGAG------ATGGAACGGA................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droSim2
TGCTCCACGTCCAGGATGACTACCGGGAA------ATGCTACAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TGCTCCACGTCCAGGATGACTACCGGGAA------ATGCTACAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............GATGACTACCGGGAA------ATGCA.....................................................................................................................................................................................................................................2011.0010100
droYak3
TGCTTCACATCCAAGATGACTACCGGGAA------GTGATACAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TGCTTCACGTCCAAGATGACTACCGGGAA------ATGATGCAAATACTCGGGGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
TGCTGAACATCCTGGAGGAGCACAAGGCG------ACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGCTGAACATCCTGGAGGAGCACAAGGCG------ACGGCCAGGCTGTTGGAGGAGCGAACGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/18/2015 at 05:46 AM