ID:

dan_2824

 Coordinate:

scaffold_13339:4172346-4172496 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.5 -16.3 -16.2

Flybase annnotation

CDS [Dana\GF13980-cds]; exon [dana_GLEANR_14644:2]; intron [Dana\GF13980-in]; Antisense to intron [Dana\GF13927-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. scaffold_4186:1099-1123 +
  2. scaffold_6356:529-553 +
  3. scaffold_9036:597-621 -
  4. scaffold_11140:2982-3006 -
  5. scaffold_12911:1907981-1908005 +
  6. scaffold_12916:3071196-3071220 -
  7. scaffold_13099:890425-890449 +
  8. scaffold_13111:397112-397136 -
  9. scaffold_13260:1489926-1489950 -
  10. dan_2824  scaffold_13339:4172362-4172386 +
star
  1. scaffold_12667:28-54 +
  2. dan_2824  scaffold_13339:4172427-4172453 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGGATTGCTTAGAAATAATAATTCAAGACTTTTCAGAAATTGATTTGAATTTGAATTTTGAAGTTTAAAGGGTATTCGAAATTGCTGGATTTTTTTGTCCTCTCTCGCGGGGATATTTAATAGTTGTAGTTACGTGATATTTGTAATTTTATATAATTTTATATAAAAAAAATACATAAAAAAAATCCAAGACTCCACAGGCAGAGGGGTTGATGTTGCCGGCGGAATTTCGGCGACGGGTCGTAAAAAT
******************************************************************....(((((((((.((((((..........(((((((......)))))))..........)))))).)).)))))))...............********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V106
head
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGG......................................... 24 0 20 6.20 124 46 69 9 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGG.......................................... 23 0 20 5.15 103 103 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGG........................................... 22 0 20 4.75 95 91 0 0 4 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGTTG...................................... 27 0 20 3.30 66 56 9 0 1 0
..................................................................TAAAGGGTATTCGAAATTGCTGGAT................................................................................................................................................................ 25 0 10 2.30 23 13 9 0 1 0
..................................................................TAAAGGGTATTCGAAATTGCTGGATT............................................................................................................................................................... 26 0 10 2.20 22 12 10 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGT........................................ 25 0 20 2.15 43 30 0 13 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGGA................................................................................................................................................................. 24 0 18 1.67 30 10 17 2 1 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAG............................................ 21 0 20 1.25 25 10 15 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGG.................................................................................................................................................................. 23 0 18 1.11 20 5 13 1 1 0
..................................................................TAAAGGGTATTCGAAATTGC..................................................................................................................................................................... 20 0 18 0.83 15 1 13 1 0 0
.........................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACGGG.......... 24 0 20 0.80 16 14 1 1 0 0
...................................................................................................................................TACGTGATATTTGTAATTTTATATAAT............................................................................................. 27 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGTT....................................... 26 0 20 0.45 9 7 0 2 0 0
..........................................................................................................................................................................................TGCAAGACTCCACAGGCAGAGG........................................... 22 1 20 0.35 7 0 7 0 0 0
..........................................................................................................................................................................................TCAAAGACTCCACAGGCAGAGGGGT........................................ 25 1 20 0.30 6 0 6 0 0 0
..........................................................................................................................................................................................TCAAAGACTCCACAGGCAGAGGG.......................................... 23 1 20 0.30 6 0 6 0 0 0
...........................................................................................................................................................................................CCAAGACTCCACAGGCAGAGG........................................... 21 0 20 0.30 6 6 0 0 0 0
........................................................................................................................................................................................................................TTGCCGGCGGAATTTCGGCGACGGG.......... 25 0 20 0.25 5 4 1 0 0 0
...................................................................................................................................................................................................................TGATGTTGCCGGCGGAATTTCGG................. 23 0 20 0.25 5 3 0 2 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGA............................................. 20 0 20 0.20 4 4 0 0 0 0
.................................................................TTAAAGGGTATTCGAAATTGCTGGA................................................................................................................................................................. 25 0 18 0.17 3 2 1 0 0 0
..........................................................................................................................................................................................TCCTAGACTCCACAGGCAGAGG........................................... 22 1 20 0.15 3 0 3 0 0 0
..............................................................................................................................................................................................................................GCGGAATTTCGGCGACGGGTC........ 21 0 20 0.15 3 3 0 0 0 0
..........................................................................................................................................................................................TGCAAGACTCCACAGGCAGAGGGGTT....................................... 26 1 20 0.15 3 0 3 0 0 0
.............................................................................................................................................................................................................AGGGGTTGATGTTGCCGGCGG......................... 21 0 20 0.15 3 3 0 0 0 0
.........................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACGGGTC........ 26 0 20 0.15 3 3 0 0 0 0
.........................................................................................................................................................................................................................TTCCGGCGGAATTTCGGCGACGGG.......... 24 1 20 0.15 3 0 3 0 0 0
...........................................................................................................................................................................................CCAAGACTCCACAGGCAGAGGGG......................................... 23 0 20 0.15 3 3 0 0 0 0
..........................................................................................................................................................................................TCCTAGACTCCACAGGCAGAGGG.......................................... 23 1 20 0.15 3 0 3 0 0 0
........................................................................................................................................................................................................................TTGCCGGCGGAATTTCGGCGACGG........... 24 0 20 0.15 3 3 0 0 0 0
..........................................................................................................................................................................................TCCAAGACGCCACAGGCAGAGG........................................... 22 1 20 0.15 3 3 0 0 0 0
.......................................................................................................................................................................................AAATCCAAGACTCCACAGGCAGAGGG.......................................... 26 0 20 0.15 3 1 2 0 0 0
.........................................................................................................TCGCGGGGATATTTAATAGTTGTAGT........................................................................................................................ 26 0 18 0.11 2 1 0 0 1 0
..................................................................TAAAGGGTATTCGAAATTGCTG................................................................................................................................................................... 22 0 18 0.11 2 2 0 0 0 0
.............................................TTGAATTTGAATTTTGAAGTT......................................................................................................................................................................................... 21 0 18 0.11 2 2 0 0 0 0
..................................................................TAATGGGTATTCGAAATTGCTGGA................................................................................................................................................................. 24 1 18 0.11 2 0 2 0 0 0
..........................................................................................TTTTTTTGTCCTCTCTCGCGGGGA......................................................................................................................................... 24 0 9 0.11 1 0 0 1 0 0
..................................................................................................................TATTTAATAGTTGTAGTTACGTGATA............................................................................................................... 26 0 19 0.11 2 1 1 0 0 0
.................................................................TTAAAGGGTATTCGAAATTGCTGGATT............................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................TAGTTGTAGTTACGTGATATTTGTAA........................................................................................................ 26 0 20 0.10 2 1 0 0 0 1
........................................................................................................................................................................................AATCCAAGACTCCACAGGCAGAGGG.......................................... 25 0 20 0.10 2 1 1 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGTATTT.............................................................................................................................................................. 27 1 10 0.10 1 0 0 0 1 0
..................................................................TAAAGGGTATTCGAAATTGCTGGTT................................................................................................................................................................ 25 1 10 0.10 1 1 0 0 0 0
...............................................................................................................................................................................................................................CGGAATTTCGGCGACGGGT......... 19 0 20 0.10 2 2 0 0 0 0
...................................................................AAAGGGTATTCGAAATTGCTGGATT............................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0
.................................................................TTAAAGGGTATTCGAAATTGCTGGAT................................................................................................................................................................ 26 0 10 0.10 1 1 0 0 0 0
.............................................................................................................................................................................................................................GGCGGAATTTCGGCGACGGGTCGT...... 24 0 20 0.10 2 1 1 0 0 0
...........................................................................................................................................................................................CCAAGACTCCACAGGCAGAGGGGTT....................................... 25 0 20 0.10 2 1 1 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAAGGG......................................... 24 1 20 0.10 2 0 0 0 2 0
..................................................................TAAAGGGTGTTCGAAATTGCTGGATT............................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGATGT.................................. 23 0 20 0.10 2 1 1 0 0 0
..................................................................................................................................................................................................................TTGATGTTGCCGGCGGAATTTCGG................. 24 0 20 0.10 2 0 1 1 0 0
....................................................................................................................................................................................................CACAGGCAGAGGGGTTGATGT.................................. 21 0 20 0.10 2 0 1 0 1 0
...................................................................AAAGGGTATTCGAAATTGCTGGATTT.............................................................................................................................................................. 26 0 10 0.10 1 0 1 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGGATTTT............................................................................................................................................................. 28 0 10 0.10 1 0 1 0 0 0
............................................................................................TTTTTGTCCTCTCTCGCGGGGATATT..................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGA..................................... 20 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................................................................TGCAAGACTCCACAGGCAGAGGGGT........................................ 25 1 20 0.10 2 0 2 0 0 0
...................................................................................................................................................................................................................TGATGTTGCCGGCGGAATTTCGGC................ 24 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................................................................TCCAATACTCCACAGGCAGAGG........................................... 22 1 20 0.10 2 0 2 0 0 0
.........................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACGG........... 23 0 20 0.10 2 0 1 0 1 0
..................................................................TAAAGGGTATTCGAAATTGCTGGATC............................................................................................................................................................... 26 1 10 0.10 1 0 1 0 0 0
...................................................................AAAGGGTATTCGAAATTGCTGGAT................................................................................................................................................................ 24 0 10 0.10 1 0 1 0 0 0
.............................................................................................................................................................................................................................GGCGGAATTTCGGCGACGGGTCGTA..... 25 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGTTT...................................... 27 1 20 0.10 2 2 0 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGGATTT.............................................................................................................................................................. 27 0 10 0.10 1 1 0 0 0 0
....................................................TGAATTTTGAAGTTTAAAGGGTATTCG............................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGATG................................... 22 0 20 0.10 2 0 1 1 0 0
...........................................................................................................................GTTGTAGTTACGTGATATTTGTAATT...................................................................................................... 26 0 20 0.10 2 1 1 0 0 0
..........................................................................................................................................................................................TTCAAGACTCCACAGGCAGAGG........................................... 22 1 20 0.10 2 0 2 0 0 0
............................................................................................................................................................................................................GAGGGGTTGATGTTGCCGGCG.......................... 21 0 20 0.10 2 2 0 0 0 0
............................................................................................................................TTGTAGTTACGTGATATTTGTAATT...................................................................................................... 25 0 20 0.10 2 1 1 0 0 0
.....................................................................................................TCTCTCGCGGGGATATTTAATAGTTGT........................................................................................................................... 27 0 15 0.07 1 1 0 0 0 0
.....................................................................................................TCTCTCGCGGGGATATTTAATAGTTG............................................................................................................................ 26 0 15 0.07 1 1 0 0 0 0
.....................................................................................................TCTCTCGCTGGGATATTTAATAGTTG............................................................................................................................ 26 1 15 0.07 1 1 0 0 0 0
.......................................................................................................TGTCGCGGGGATATTTAATAGTTGTAGT........................................................................................................................ 28 1 16 0.06 1 0 1 0 0 0
.......................................................................................................TCCCGCGGGGATATTTAATAGTTGTAGT........................................................................................................................ 28 1 16 0.06 1 0 1 0 0 0
.......................................................................................................TCTCGCGGGGATATTTAATAGTTGTAGT........................................................................................................................ 28 0 16 0.06 1 0 1 0 0 0
.........................................................................TATTCGAAATTGCTGGATT............................................................................................................................................................... 19 0 17 0.06 1 1 0 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGGAG................................................................................................................................................................ 25 1 18 0.06 1 0 1 0 0 0
...................................................................TAAGGGTATTCGAAATTGC..................................................................................................................................................................... 19 1 18 0.06 1 0 1 0 0 0
................................................................TGTTAAGGGTATTCGAAATTGCT.................................................................................................................................................................... 23 2 18 0.06 1 0 1 0 0 0
.........................................................................................................TCGCGGGGATATTTAATAGTTGTAG......................................................................................................................... 25 0 18 0.06 1 1 0 0 0 0
..................................................................TAAAGTGTATTCGAAATTGCTGGA................................................................................................................................................................. 24 1 18 0.06 1 0 1 0 0 0
................................................................TTTAAAGGGTATTCGAAATTGCTGG.................................................................................................................................................................. 25 0 18 0.06 1 0 1 0 0 0
...................................................................AAAGGGTATTCGAAATTGCTG................................................................................................................................................................... 21 0 18 0.06 1 1 0 0 0 0
...............................................................GGTTAAAGGGTATTCGAAATTGCTGG.................................................................................................................................................................. 26 1 18 0.06 1 0 1 0 0 0
.................................................................TTAAAGGGTATTCGAAATTGC..................................................................................................................................................................... 21 0 18 0.06 1 0 1 0 0 0
..................................................................TTAAGGGTATTCGAAATTGC..................................................................................................................................................................... 20 1 18 0.06 1 0 1 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCTGGAGC............................................................................................................................................................... 26 2 18 0.06 1 0 1 0 0 0
..........................................................TTGAAGTTTAAAGGGTATTCGAAATTGC..................................................................................................................................................................... 28 0 18 0.06 1 0 1 0 0 0
...................................................................AGAGGGTATTCGAAATTGCTGGA................................................................................................................................................................. 23 1 18 0.06 1 0 1 0 0 0
............................................................GAAGCTTAAAGGGTATTCGAAATTGCTG................................................................................................................................................................... 28 1 18 0.06 1 0 0 0 1 0
..................................................................TAAAGGGAATTCGAAATTGC..................................................................................................................................................................... 20 1 18 0.06 1 0 1 0 0 0
..................................................................TAAAGGGTATTCGAAATTGCT.................................................................................................................................................................... 21 0 18 0.06 1 0 1 0 0 0
........................................................................................................CTCGCGGGGATATTTAATAGTTGTAGT........................................................................................................................ 27 0 18 0.06 1 1 0 0 0 0
..................................................................TTAAGGGTATTCGAAATTGCTGGA................................................................................................................................................................. 24 1 18 0.06 1 0 1 0 0 0
...........................................................TGAAGTTTAAAGGGTATTCGAAATTGC..................................................................................................................................................................... 27 0 18 0.06 1 0 0 0 1 0
......................................................................................................................TAATAGTTGTAGTTACGTGATATTTGC.......................................................................................................... 27 1 19 0.05 1 0 1 0 0 0
......................................................................................................................TAATAGTTGTAGTTACGTGATATTTG........................................................................................................... 26 0 19 0.05 1 1 0 0 0 0
................................................................................................................GATATTTAATAGTTGTAGT........................................................................................................................ 19 0 19 0.05 1 0 1 0 0 0
.....................................................................................................................TTAATAGTTGTAGTTACGTGATATTTG........................................................................................................... 27 0 19 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGGTT...................................... 27 2 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGCCTCCACAGGCAGAGGGGG........................................ 25 2 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................TCCAAGACTCCATAGGCAGAGGGG......................................... 24 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................CTCCAAGACTCCACAGGCAGAGGGG......................................... 25 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................GCCAAGACTCCACAGGCAGAGGG.......................................... 23 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................CCAAGACTCCACAGGCAG.............................................. 18 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCAAAGACTCCACAGGCAGAG............................................ 21 1 20 0.05 1 0 1 0 0 0
..................................................................TAAACGGTATTCTAAATTTCTGG.................................................................................................................................................................. 23 3 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................TCCAAGACCCCACAGGCAGAGGG.......................................... 23 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAATACTCCACAGGCAGAGGGGTT....................................... 26 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................ACAGGCAGAGGGGTTGATGTTGCC.............................. 24 0 20 0.05 1 1 0 0 0 0
..................................................................TGAAGGGTATTCGAAATTGCTGGA................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................................TGTTGCCGACGGAATTTCGGCGACGGG.......... 27 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................GAATTTCGGCGACGGGTCGTA..... 21 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGCGGGGTTGATG................................... 22 1 20 0.05 1 0 0 1 0 0
............................................................................................TTTTTGTCCTCTCTCGCGG............................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................TAGTTGTAGTTACGTGATATTTGTA......................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................TGATGTTGCCGGCCGAATTTCGGC................ 24 1 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACG............ 22 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGAT.................................... 21 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACCCCACAGGCAGAGGGGTTG...................................... 27 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAT............................................ 21 1 20 0.05 1 0 0 0 0 1
.........................................................................................................................................................................................ATCCAAGACTCCACAGGCAGAGGGG......................................... 25 0 20 0.05 1 0 1 0 0 0
..............................................................................................TTTGTCCTCTCTCGCGGGGATA....................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCACAGGGG......................................... 24 1 20 0.05 1 0 0 1 0 0
....................................................................................................................................................................................................CACAGGCAGAGGGGTTGATGTTGCCG............................. 26 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................CGGAATTTCGGCGACGGGTCG....... 21 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACACCACAGGCAGAGGG.......................................... 23 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................CAAGACTCCACAGGCAGAGGGGT........................................ 23 0 20 0.05 1 0 1 0 0 0
.............................................................................................TTTTGTCCTCTCTCGCGGGG.......................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................GACTCCACAGGCAGAGGGGT........................................ 20 0 20 0.05 1 0 0 0 1 0
......................................................................................................................................................................................AAAATCCAAGACTCCACAGGCAGAGG........................................... 26 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................GTTGATGTTGCCGGCGGAATT..................... 21 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................................TTTCGGCGACGGGTCGTAA.... 19 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................TGATGTTGCCCCCGGAATTTCGG................. 23 2 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................................GACTCCACAGGCAGAGGGGTTGATGT.................................. 26 0 20 0.05 1 0 0 0 1 0
.....................................................................................................................................................................................AAAAATCCAAGACTCCACAGGCAGA............................................. 25 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACGGGCAGAGG........................................... 22 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGAGGGGTTTATG................................... 22 1 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................................AATCCAAGACTCCACAGGCAGAGGGGT........................................ 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TGCAAGACTCCACAGGCAGAGGGGTTG...................................... 27 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGACGG.......................................... 23 1 20 0.05 1 0 0 1 0 0
..................................................................................................................................................................................AAAAAAAGACCACGACTCCAC.................................................... 21 3 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................TTGATGTTGCCGGCGGAATTTCGGC................ 25 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................TGATGTTGCCGGCGGAATTTCGGCG............... 25 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................TGATGTTGACGGCGGAATTTCGGCGA.............. 26 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................CAGAGGGGTTGATGTTGCC.............................. 19 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................ACAGGCAGAGGGGTTGATGTTGC............................... 23 0 20 0.05 1 0 0 1 0 0
..........................................................................................................................AGTTGTAGTTACGTGATATTTGTAA........................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................AAGACTCCACAGGCAGAGGGGTT....................................... 23 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCAAAGACTCCACAGGCAGAGGT.......................................... 23 2 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................CAAGACTCCACAGGCAGAGG........................................... 20 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................TAGTTGTAGTTACGTGATATTTGTAATT...................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................AAAAAAATTCAAGAATCCACA................................................... 21 2 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACACGCAGAGG........................................... 22 1 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................AGGGGTTGATGTTGCCGGCGGT........................ 22 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................AAATCCAAGACTCCACAGGCAGA............................................. 23 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................ACCAAGACTCCACAGGCAGAGGGG......................................... 24 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCTAAGACTCCACAGGCAGAGG........................................... 22 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACTCAACAGGCAGAGGGGTT....................................... 26 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCAAAGACTCCACAGGCAGAGGGGA........................................ 25 2 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACGCCAAAGGCAGAGGG.......................................... 23 2 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................TGTTGCCGGCGGAATTTCGGCGA.............. 23 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................................GCCGGCGGAATTTCGGCGACGGG.......... 23 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................CAAGACTCCACAGGCAGAGGGGTT....................................... 24 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCCCAGGCAGAGGG.......................................... 23 1 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................CCAAGACTACACAGGCAGAGGG.......................................... 22 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACCGGCAGAGAG.......................................... 23 2 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................................................TGATGTTGCCGGCGGGATTTCCG................. 23 2 20 0.05 1 0 0 1 0 0
.........................................................................................................................TAGTTGTAGTTACGTGATATTTTTAA........................................................................................................ 26 1 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGACG........................................... 22 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................GTCCACAGGCAGAGGGGTTGATG................................... 23 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................GGCGGAATTTCGGCGACGGGTCGTAA.... 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACGGGCAGAGGG.......................................... 23 1 20 0.05 1 1 0 0 0 0
....................................................TGAATTTTGAAGTTTAAAGGGTATT.............................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................................................TCTAAGACTCCACAGGCAGAGGGGT........................................ 25 1 20 0.05 1 0 0 1 0 0
............................................................................................................................................................................................CAAGACTCCACAGGCAGAGGGGTTG...................................... 25 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................CGGAATTTCGGCGACGGGTCGTAAA... 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................TTGATGTTGCCGGCGGAATTTCGGCGA.............. 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCTAGACTCCACAGGCAGAGGGG......................................... 24 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................ACAGGCAGAGGGGTTGATGTTG................................ 22 0 20 0.05 1 0 0 0 1 0
.........................................................................................................................................................................................ATCCAAGACTCCACAGGCAGAGG........................................... 23 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................CACAGGCAGAGGGGTTGATG................................... 20 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................................GATGTTGCCGGCGGAATTTCG.................. 21 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACGCCACAGGCAGAGGGGTTG...................................... 27 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................ATATCCAAGACTCCACAGGCAGAGGG.......................................... 26 1 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................................................TTGCCGGCGGAATTTCGGCGACGGGTTT....... 28 2 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACCCCACAGGCAGAGGGGTTT...................................... 27 2 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCATGACTCCACAGGCAGAGGGGT........................................ 25 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................CAGAGGGGTTGATGTTGCCGGCGG......................... 24 0 20 0.05 1 1 0 0 0 0
.........................................................TTTGAAGTTTAAAGGGAATTCGAA.......................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................CTCCACAGGCAGAGGGGTTG...................................... 20 0 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................................CAGAGGGGTTGATGTTGCCGGCGGAA....................... 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGT.......................................... 23 1 20 0.05 1 0 1 0 0 0
............................................................................................TTTTTGTCGTCTCTCGCGGGG.......................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................TCCAATACTCCACAGGCAGAGGG.......................................... 23 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................TGCCGGCGTAATTTCGGCGACGG........... 23 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................TGTTGCCGGCGGAATTTCGGCGAC............. 24 0 20 0.05 1 1 0 0 0 0
................................................................TTTAAAGGGTATTCGAAA......................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................AGAGGGGTTGATGTTGCCGGCGGAA....................... 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TCCACAGGCAGAAGGGTTGATG................................... 22 1 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................................................TCCAAGACCCCACAGGCAGAGGGG......................................... 24 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................AGACTCCACAGGCAGAGGGGTTG...................................... 23 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................CAAGACTCCACAGGCAGAG............................................ 19 0 20 0.05 1 1 0 0 0 0
..................................................TTTGAATTTTGAAGTTTAAAGGGTATT.............................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................TCCAAGACCCCACAGGCAGAG............................................ 21 1 20 0.05 1 1 0 0 0 0
.............................................................................................TTTTGTCCTCTCTCGCGGGGATA....................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................................GCGGAATTTCGGCGACGGGTCGTA..... 24 0 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

ACCCTAACGAATCTTTATTATTAAGTTCTGAAAAGTCTTTAACTAAACTTAAACTTAAAACTTCAAATTTCCCATAAGCTTTAACGACCTAAAAAAACAGGAGAGAGCGCCCCTATAAATTATCAACATCAATGCACTATAAACATTAAAATATATTAAAATATATTTTTTTTATGTATTTTTTTTAGGTTCTGAGGTGTCCGTCTCCCCAACTACAACGGCCGCCTTAAAGCCGCTGCCCAGCATTTTTA
*********************************************************************************************....(((((((((.((((((..........(((((((......)))))))..........)))))).)).)))))))...............****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
 V106
head
.....................................................................................GACCTAAAAAAACAGGAGAGAGCGCCCC.......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.......CGAATCTTTATTATTAAGTTCTGAA........................................................................................................................................................................................................................... 25 0 20 0.35 7 0 7 0 0 0 0
...................................................................................................................................................................................................................................TAAAGCCGCTGCCCAGCATTTTTA 24 0 20 0.30 6 6 0 0 0 0 0
.................................................................................................................................................................................................................................CTTAAAGCCGCTGCCCAGCATTTTTA 26 0 20 0.30 6 6 0 0 0 0 0
................................................................................................................CTATAAATTATCAACATCAATGCAC.................................................................................................................. 25 0 19 0.21 4 0 4 0 0 0 0
...............................................................................................................................................................................................................................GCCTTAAAGCCGCTGCCCAGCATTTTTA 28 0 20 0.15 3 3 0 0 0 0 0
...........................................................................................................CGCCCCTATAAATTATCAACATCA........................................................................................................................ 24 0 18 0.11 2 2 0 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATTC.................................................................................................................... 25 1 19 0.11 2 0 2 0 0 0 0
................................................................................................................CTATAAAATATCAACAACAACGC.................................................................................................................... 23 3 20 0.10 2 0 2 0 0 0 0
................................................TTAAACTTAAAACTTCAAATTTCCCATA............................................................................................................................................................................... 28 0 20 0.10 2 0 2 0 0 0 0
.....................................................................................................................................................................................................................................AAGCCGCTGCCCAGCATTTTTA 22 0 20 0.10 2 2 0 0 0 0 0
....................................................................................................GAGAGAGCGCCCCTATAAATTATCAA............................................................................................................................. 26 0 15 0.07 1 1 0 0 0 0 0
....................................................................................................GAGAGAGCGCCCCTATAAATTATCAACAT.......................................................................................................................... 29 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................GAGAGCGCCCCTATAAATTATC............................................................................................................................... 22 0 15 0.07 1 0 0 0 1 0 0
.......................................................................................................AGAGCGCCCCTATAAATTATCAACATCA........................................................................................................................ 28 0 16 0.06 1 0 1 0 0 0 0
.........................................................................................................AGCGCCCCTATAAATTATC............................................................................................................................... 19 0 18 0.06 1 0 0 1 0 0 0
.........................................................................................................AGCGCCCCTATAAATTATCAACATCA........................................................................................................................ 26 0 18 0.06 1 1 0 0 0 0 0
.........................................................................................................AGCGCCCCTATAAATTAGCAACATCA........................................................................................................................ 26 1 18 0.06 1 1 0 0 0 0 0
...........................................................................................................CGCCCCTATAAATTATCAACATCAATGC.................................................................................................................... 28 0 18 0.06 1 0 1 0 0 0 0
..........................................................................................................GCGCCCCTATAAATTATCAACATCAATG..................................................................................................................... 28 0 18 0.06 1 1 0 0 0 0 0
..........................................................................................................GCGCCCCTATAAATTATCAACATCA........................................................................................................................ 25 0 18 0.06 1 1 0 0 0 0 0
.........................................................................................................AGCGCCCCTATAAATTATCAACATCAAT...................................................................................................................... 28 0 18 0.06 1 1 0 0 0 0 0
...................................................................TTTCCCATAAGCTTTAACGACCT................................................................................................................................................................. 23 0 18 0.06 1 1 0 0 0 0 0
...........................................................................................................CGCCCCTATAAATTATAAACATCAACTC.................................................................................................................... 28 3 18 0.06 1 0 1 0 0 0 0
.....................................................................................................................AATTATCAACATCAATGCACTAT............................................................................................................... 23 0 19 0.05 1 1 0 0 0 0 0
................................................................................................................CTATAAATTATCAACATCAATGAAC.................................................................................................................. 25 1 19 0.05 1 0 1 0 0 0 0
............................................................................................................GCCCCTATAAATTATCAACATCAATG..................................................................................................................... 26 0 19 0.05 1 1 0 0 0 0 0
.............................................................................................................CCCCTATAAATTATCAACATCAATGC.................................................................................................................... 26 0 19 0.05 1 0 1 0 0 0 0
................................................................................................................CTATAAATTATCAACATCAATGCACGA................................................................................................................ 27 1 19 0.05 1 0 1 0 0 0 0
................................................................................................................CTATAAATTATCAACATCAATGCACT................................................................................................................. 26 0 19 0.05 1 0 1 0 0 0 0
.............................................................................................................CCCCTATAAATTATCAACATCAATGCA................................................................................................................... 27 0 19 0.05 1 0 1 0 0 0 0
......................................................................................................................ATTATCAACATCAATGCACTATATA............................................................................................................ 25 1 19 0.05 1 0 1 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATGCACT................................................................................................................. 28 0 19 0.05 1 0 1 0 0 0 0
.............................................................................................................CCCCTATAAATTATCAACATCAATGCAC.................................................................................................................. 28 0 19 0.05 1 1 0 0 0 0 0
...................................................................................................................TAAATTATCAACATCAATGCACTAGA.............................................................................................................. 26 1 19 0.05 1 0 1 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATG..................................................................................................................... 24 0 19 0.05 1 0 1 0 0 0 0
..................................................................................................................ATAAATTATCAACATCAATGCACTAT............................................................................................................... 26 0 19 0.05 1 1 0 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATGCA................................................................................................................... 26 0 19 0.05 1 1 0 0 0 0 0
.............................................................................................................CCCCTATAAATTATCAACATCAAGG..................................................................................................................... 25 1 19 0.05 1 0 1 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATGCACC................................................................................................................. 28 1 19 0.05 1 0 1 0 0 0 0
...................................................................................................................TAAATTATCAACATCAATGCACTATA.............................................................................................................. 26 0 19 0.05 1 0 1 0 0 0 0
...............................................................................................................CCTATAAATTATCAACATCA........................................................................................................................ 20 0 19 0.05 1 0 1 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATGC.................................................................................................................... 25 0 19 0.05 1 0 1 0 0 0 0
.............................................................................................................CCCCTATAAATTATCAACATCAATGCACT................................................................................................................. 29 0 19 0.05 1 1 0 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATAAATGCAC.................................................................................................................. 27 1 19 0.05 1 0 1 0 0 0 0
...................................................................................................................TAAATTATCAACATCAATTCACTAT............................................................................................................... 25 1 19 0.05 1 0 1 0 0 0 0
..............................................................................................................CCCTATAAATTATCAACATCAATGCAC.................................................................................................................. 27 0 19 0.05 1 0 1 0 0 0 0
...................................................AACTTAAAACTTCAAATTTCCCATA............................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................GTGTCCGTCTCCCCAACTACAACGGC............................. 26 0 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................................................GCCGCCTTAAAGCCGCTGCCCAG........ 23 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................CCGTCTCCCCAACTACAACGGCCGCCTT....................... 28 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................AGGAGAGAGCGCCCCTATAAATT.................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................CGCCTTAAAGCCGCTGCCCAGCAT..... 24 0 20 0.05 1 0 0 0 0 0 1
...........TCTTTATTATTAAGTTCTGAAAAGTCT..................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................CTTAAAGCCGCTGCCCAGCATTTTGA 26 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................TGCCTTAAAGCCGCTGCCCAGCATTTTTA 29 1 20 0.05 1 1 0 0 0 0 0
................................................TTAAACTTAAAACTTCAAATTTCCCAT................................................................................................................................................................................ 27 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................ATAACTTTTCAACATCAATGCACTAT............................................................................................................... 26 2 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................................CTCCCCAACTACAACGGCCGC.......................... 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TCTCCCCAACTACAACGGCCGCCT........................ 24 0 20 0.05 1 0 1 0 0 0 0
..........................................................AGCTTCAAATTTCCCATGC.............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0
..............................................................................................................................................................................................................CCCCAACTACAACGGCCGCCTTAAAG................... 26 0 20 0.05 1 0 1 0 0 0 0
..........................................................AACTTCAAATTACCCATGA.............................................................................................................................................................................. 19 2 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................................CCGTCTCCCCAACTACAACGGCCGCCT........................ 27 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13339:4172296-4172546 + dan_2824 TGGGATTGCTTAGAAATAATAATTCAAGACTTTT-CAGAAATTGATTTGAATTTGAATTTTGAAGTTT---------------------AA----------AGGGTATTCGAAATTGCTGGATTTTTTTGTCCTCTCTCGCGGG-------GATATTTAATAGTTGTAGTTACGTGATATTTGTAATTTTATATAATT----TTAT--ATAAAAAAAATACATAAAAAAAATCCAAGACTCCACAGGCAGAGGGGTTGATGTTGCCGGCGGAATTTCGGCGACGGGTCGTAAAAAT
droBip1 scf7180000394255:5113-5363 + TTGGATTGCTTAGAAATAATAATTCAAGACGTATTCA-AAAATGATTT------------TTAAGTTTTTTTGCTCTTTTTCATTTGGTAAACTATACGTTAGGGTATTTGAAATTGTTGG-TTTTTTTGTCCTCTCCCGCTGG-------GATATTTAATAA--------------------TGTATTT--ACGTGTTTTTGTAT--ATAAAAAAAATACATAAAAAAAATCCAAGACTCCACAGGCAGAGGGGTTGAAATTACCAGTGGGATTTTAGCGACGGGTCGTAAAAAT
droKik1 scf7180000299802:24105-24142 - TTAA----------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------ATAATT----TTAT--TTAAAAAATATATATAGAAAAA-----------------------------------------------------------------A
droFic1 scf7180000451976:4320-4366 - AT------------------TATTCAAGATTTTT-TTAAAATTTATTTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGAAATTCA--------------------------------------------------------------------AAAT
droEle1 scf7180000490912:1441-1473 + TA------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAT----TTATTTAT--AAAAAAAATATAAA--------------------------------------------------------------------AA
dm3 chrUextra:17076035-17076066 + AA------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTAA--ATAAAAAAAAAAAATAAATAAA----------------------------------------------------------------AT
droSim2 node_53859:1241-1335 - AA------------------T--------------------------------------------------------------------------------------------------------------------TCTAGCTACGTAAAGATTTGTAATTTTAATTTTATAA----------------------------------AT--AAAAAAAAAAAAAAAAAGATTCAATATTAGA----AATAAGATTCAATGTAGGCGAC---------------------------
droSec2 scaffold_126:20307-20394 + TCAC-------------------------------------------------------------------------------------------------------------------------------------TCGCGAAGCGAACGGATCTTTAATAATTATATTTACAATATATATATATATAT--ATATAT----TTTTTTTTATGAAAATTA-TTA--------------------------------------------------------------------AAAA
droWil2 scf2_1100000004701:19029-19081 + TGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGTAGATTAGCAAAAGA----TAAT--ATAGCAAAAATACAGGAAGAAAAT---------------------------------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGGGATTGCTTAGAAATAATAATTCAAGACTTTT-CAGAAATTGATTTGAATTTGAATTTTGAAGTTT---------------------AA----------AGGGTATTCGAAATTGCTGGATTTTTTTGTCCTCTCTCGCGGG-------GATATTTAATAGTTGTAGTTACGTGATATTTGTAATTTTATATAATT----TTAT--ATAAAAAAAATACATAAAAAAAATCCAAGACTCCACAGGCAGAGGGGTTGATGTTGCCGGCGGAATTTCGGCGACGGGTCGTAAAAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGG.........................................24206.2012446699000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGG..........................................23205.1510310300000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGG...........................................22204.75959100040
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGTTG......................................27203.30665690010
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGAT.............................................................................................................................................................................25102.30231390010
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGATT............................................................................................................................................................................26102.202212100000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGT........................................25202.154330013000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGA..............................................................................................................................................................................24181.673010172010
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAG............................................21201.252510150000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGG...............................................................................................................................................................................23181.11205131010
...................................................................T---------------------AA----------AGGGTATTCGAAATTGC..................................................................................................................................................................................20180.83151131000
......................................................................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACGGG..........24200.80161411000
..........................................................................................................................................................................TACGTGATATTTGTAATTTTATATAAT...................................................................................................2720.501100000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGTT.......................................26200.459702000
........................................................................................................................................................................................................................................CCAAGACTCCACAGGCAGAGG...........................................21200.306600000
.....................................................................................................................................................................................................................................................................TTGCCGGCGGAATTTCGGCGACGGG..........25200.255410000
................................................................................................................................................................................................................................................................TGATGTTGCCGGCGGAATTTCGG.................23200.255302000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGA.............................................20200.204400000
..................................................................TT---------------------AA----------AGGGTATTCGAAATTGCTGGA..............................................................................................................................................................................25180.173210000
...........................................................................................................................................................................................................................................................................GCGGAATTTCGGCGACGGGTC........21200.153300000
..........................................................................................................................................................................................................................................................AGGGGTTGATGTTGCCGGCGG.........................21200.153300000
......................................................................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACGGGTC........26200.153300000
........................................................................................................................................................................................................................................CCAAGACTCCACAGGCAGAGGGG.........................................23200.153300000
.....................................................................................................................................................................................................................................................................TTGCCGGCGGAATTTCGGCGACGG...........24200.153300000
....................................................................................................................................................................................................................................AAATCCAAGACTCCACAGGCAGAGGG..........................................26200.153120000
.........................................................................................................................................TCGCGGG-------GATATTTAATAGTTGTAGT..............................................................................................................................26180.112100010
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTG................................................................................................................................................................................22180.112200000
..............................................TTGAATTTGAATTTTGAAGTT.....................................................................................................................................................................................................................................21180.112200000
..........................................................................................................................TTTTTTTGTCCTCTCTCGCGGG-------GA...............................................................................................................................................2490.111001000
.........................................................................................................................................................TATTTAATAGTTGTAGTTACGTGATA.....................................................................................................................26190.112110000
..................................................................TT---------------------AA----------AGGGTATTCGAAATTGCTGGATT............................................................................................................................................................................27100.101100000
................................................................................................................................................................TAGTTGTAGTTACGTGATATTTGTAA..............................................................................................................26200.102100001
.....................................................................................................................................................................................................................................AATCCAAGACTCCACAGGCAGAGGG..........................................25200.102110000
............................................................................................................................................................................................................................................................................CGGAATTTCGGCGACGGGT.........19200.102200000
.........................................................................................AA----------AGGGTATTCGAAATTGCTGGATT............................................................................................................................................................................25100.101100000
..................................................................TT---------------------AA----------AGGGTATTCGAAATTGCTGGAT.............................................................................................................................................................................26100.101100000
..........................................................................................................................................................................................................................................................................GGCGGAATTTCGGCGACGGGTCGT......24200.102110000
........................................................................................................................................................................................................................................CCAAGACTCCACAGGCAGAGGGGTT.......................................25200.102110000
...............................................................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGATGT..................................23200.102110000
...............................................................................................................................................................................................................................................................TTGATGTTGCCGGCGGAATTTCGG.................24200.102011000
.................................................................................................................................................................................................................................................CACAGGCAGAGGGGTTGATGT..................................21200.102010010
.........................................................................................AA----------AGGGTATTCGAAATTGCTGGATTT...........................................................................................................................................................................26100.101010000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGATTTT..........................................................................................................................................................................28100.101010000
............................................................................................................................TTTTTGTCCTCTCTCGCGGG-------GATATT...........................................................................................................................................26200.102200000
...............................................................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGA.....................................20200.102200000
................................................................................................................................................................................................................................................................TGATGTTGCCGGCGGAATTTCGGC................24200.102200000
......................................................................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACGG...........23200.102010010
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGATC............................................................................................................................................................................26100.101010000
.........................................................................................AA----------AGGGTATTCGAAATTGCTGGAT.............................................................................................................................................................................24100.101010000
..........................................................................................................................................................................................................................................................................GGCGGAATTTCGGCGACGGGTCGTA.....25200.102200000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGGGTTT......................................27200.102200000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGATTT...........................................................................................................................................................................27100.101100000
.....................................................TGAATTTTGAAGTTT---------------------AA----------AGGGTATTCG.........................................................................................................................................................................................27200.102200000
...............................................................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGATG...................................22200.102011000
..................................................................................................................................................................GTTGTAGTTACGTGATATTTGTAATT............................................................................................................26200.102110000
.........................................................................................................................................................................................................................................................GAGGGGTTGATGTTGCCGGCG..........................21200.102200000
...................................................................................................................................................................TTGTAGTTACGTGATATTTGTAATT............................................................................................................25200.102110000
.....................................................................................................................................TCTCTCGCGGG-------GATATTTAATAGTTGT.................................................................................................................................27150.071100000
.....................................................................................................................................TCTCTCGCGGG-------GATATTTAATAGTTG..................................................................................................................................26150.071100000
.......................................................................................................................................TCTCGCGGG-------GATATTTAATAGTTGTAGT..............................................................................................................................28160.061010000
.........................................................................................................TATTCGAAATTGCTGGATT............................................................................................................................................................................19170.061100000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGAG.............................................................................................................................................................................25180.061010000
.........................................................................................................................................TCGCGGG-------GATATTTAATAGTTGTAG...............................................................................................................................25180.061100000
.................................................................TTT---------------------AA----------AGGGTATTCGAAATTGCTGG...............................................................................................................................................................................25180.061010000
.........................................................................................AA----------AGGGTATTCGAAATTGCTG................................................................................................................................................................................21180.061100000
..................................................................TT---------------------AA----------AGGGTATTCGAAATTGC..................................................................................................................................................................................21180.061010000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCTGGAGC............................................................................................................................................................................26180.061010000
...........................................................TTGAAGTTT---------------------AA----------AGGGTATTCGAAATTGC..................................................................................................................................................................................28180.061010000
...................................................................T---------------------AA----------AGGGTATTCGAAATTGCT.................................................................................................................................................................................21180.061010000
........................................................................................................................................CTCGCGGG-------GATATTTAATAGTTGTAGT..............................................................................................................................27180.061100000
............................................................TGAAGTTT---------------------AA----------AGGGTATTCGAAATTGC..................................................................................................................................................................................27180.061000010
.............................................................................................................................................................TAATAGTTGTAGTTACGTGATATTTGC................................................................................................................27190.051010000
.............................................................................................................................................................TAATAGTTGTAGTTACGTGATATTTG.................................................................................................................26190.051100000
.......................................................................................................................................................GATATTTAATAGTTGTAGT..............................................................................................................................19190.051010000
............................................................................................................................................................TTAATAGTTGTAGTTACGTGATATTTG.................................................................................................................27190.051100000
........................................................................................................................................................................................................................................CCAAGACTCCACAGGCAG..............................................18200.051100000
..................................................................................................................................................................................................................................................ACAGGCAGAGGGGTTGATGTTGCC..............................24200.051100000
..............................................................................................................................................................................................................................................................................GAATTTCGGCGACGGGTCGTA.....21200.051100000
............................................................................................................................TTTTTGTCCTCTCTCGCGG.........................................................................................................................................................19200.051100000
................................................................................................................................................................TAGTTGTAGTTACGTGATATTTGTA...............................................................................................................25200.051100000
......................................................................................................................................................................................................................................................................TGCCGGCGGAATTTCGGCGACG............22200.051100000
...............................................................................................................................................................................................................................................TCCACAGGCAGAGGGGTTGAT....................................21200.051010000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAT............................................21200.051000001
......................................................................................................................................................................................................................................ATCCAAGACTCCACAGGCAGAGGGG.........................................25200.051010000
..............................................................................................................................TTTGTCCTCTCTCGCGGG-------GATA.............................................................................................................................................22200.051010000
.................................................................................................................................................................................................................................................CACAGGCAGAGGGGTTGATGTTGCCG.............................26200.051100000
............................................................................................................................................................................................................................................................................CGGAATTTCGGCGACGGGTCG.......21200.051100000
.........................................................................................................................................................................................................................................CAAGACTCCACAGGCAGAGGGGT........................................23200.051010000
.............................................................................................................................TTTTGTCCTCTCTCGCGGG-------G................................................................................................................................................20200.051100000
............................................................................................................................................................................................................................................GACTCCACAGGCAGAGGGGT........................................20200.051000010
...................................................................................................................................................................................................................................AAAATCCAAGACTCCACAGGCAGAGG...........................................26200.051100000
..............................................................................................................................................................................................................................................................GTTGATGTTGCCGGCGGAATT.....................21200.051100000
.................................................................................................................................................................................................................................................................................TTTCGGCGACGGGTCGTAA....19200.051100000
............................................................................................................................................................................................................................................GACTCCACAGGCAGAGGGGTTGATGT..................................26200.051000010
..................................................................................................................................................................................................................................AAAAATCCAAGACTCCACAGGCAGA.............................................25200.051100000
.....................................................................................................................................................................................................................................AATCCAAGACTCCACAGGCAGAGGGGT........................................27200.051100000
...............................................................................................................................................................................................................................................................TTGATGTTGCCGGCGGAATTTCGGC................25200.051100000
................................................................................................................................................................................................................................................................TGATGTTGCCGGCGGAATTTCGGCG...............25200.051100000
.......................................................................................................................................................................................................................................................CAGAGGGGTTGATGTTGCC..............................19200.051010000
..................................................................................................................................................................................................................................................ACAGGCAGAGGGGTTGATGTTGC...............................23200.051001000
.................................................................................................................................................................AGTTGTAGTTACGTGATATTTGTAA..............................................................................................................25200.051100000
..........................................................................................................................................................................................................................................AAGACTCCACAGGCAGAGGGGTT.......................................23200.051100000
.........................................................................................................................................................................................................................................CAAGACTCCACAGGCAGAGG...........................................20200.051100000
................................................................................................................................................................TAGTTGTAGTTACGTGATATTTGTAATT............................................................................................................28200.051010000
..........................................................................................................................................................................................................................................................AGGGGTTGATGTTGCCGGCGGT........................22200.051100000
....................................................................................................................................................................................................................................AAATCCAAGACTCCACAGGCAGA.............................................23200.051100000
...................................................................................................................................................................................................................................................................TGTTGCCGGCGGAATTTCGGCGA..............23200.051100000
.......................................................................................................................................................................................................................................................................GCCGGCGGAATTTCGGCGACGGG..........23200.051100000
.........................................................................................................................................................................................................................................CAAGACTCCACAGGCAGAGGGGTT.......................................24200.051010000
..........................................................................................................................................................................................................................................................................GGCGGAATTTCGGCGACGGGTCGTAA....26200.051100000
.....................................................TGAATTTTGAAGTTT---------------------AA----------AGGGTATT...........................................................................................................................................................................................25200.051000010
.........................................................................................................................................................................................................................................CAAGACTCCACAGGCAGAGGGGTTG......................................25200.051100000
............................................................................................................................................................................................................................................................................CGGAATTTCGGCGACGGGTCGTAAA...25200.051100000
...............................................................................................................................................................................................................................................................TTGATGTTGCCGGCGGAATTTCGGCGA..............27200.051100000
..................................................................................................................................................................................................................................................ACAGGCAGAGGGGTTGATGTTG................................22200.051000010
......................................................................................................................................................................................................................................ATCCAAGACTCCACAGGCAGAGG...........................................23200.051010000
.................................................................................................................................................................................................................................................CACAGGCAGAGGGGTTGATG...................................20200.051010000
.................................................................................................................................................................................................................................................................GATGTTGCCGGCGGAATTTCG..................21200.051100000
.....................................................................................................................................................................................................................................................................TTGCCGGCGGAATTTCGGCGACGGGTTT.......28200.051100000
.......................................................................................................................................................................................................................................................CAGAGGGGTTGATGTTGCCGGCGG.........................24200.051100000
..............................................................................................................................................................................................................................................CTCCACAGGCAGAGGGGTTG......................................20200.051001000
.......................................................................................................................................................................................................................................................CAGAGGGGTTGATGTTGCCGGCGGAA.......................26200.051100000
.......................................................................................................................................................................................................................................TCCAAGACTCCACAGGCAGAGGT..........................................23200.051010000
...................................................................................................................................................................................................................................................................TGTTGCCGGCGGAATTTCGGCGAC.............24200.051100000
.................................................................TTT---------------------AA----------AGGGTATTCGAAA......................................................................................................................................................................................18200.051100000
........................................................................................................................................................................................................................................................AGAGGGGTTGATGTTGCCGGCGGAA.......................25200.051100000
...........................................................................................................................................................................................................................................AGACTCCACAGGCAGAGGGGTTG......................................23200.051100000
.........................................................................................................................................................................................................................................CAAGACTCCACAGGCAGAG............................................19200.051100000
...................................................TTTGAATTTTGAAGTTT---------------------AA----------AGGGTATT...........................................................................................................................................................................................27200.051010000
.............................................................................................................................TTTTGTCCTCTCTCGCGGG-------GATA.............................................................................................................................................23200.051010000
...........................................................................................................................................................................................................................................................................GCGGAATTTCGGCGACGGGTCGTA.....24200.051010000
droBip1
TTGGATTGCTTAGAAATAATAATTCAAGACGTATTCA-AAAATGATTT------------TTAAGTTTTTTTGCTCTTTTTCATTTGGTAAACTATACGTTAGGGTATTTGAAATTGTTGG-TTTTTTTGTCCTCTCCCGCTGG-------GATATTTAATAA--------------------TGTATTT--ACGTGTTTTTGTAT--ATAAAAAAAATACATAAAAAAAATCCAAGACTCCACAGGCAGAGGGGTTGAAATTACCAGTGGGATTTTAGCGACGGGTCGTAAAAATSizeHit CountTotal NormTotal
No Reads
droKik1
TTAA----------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------ATAATT----TTAT--TTAAAAAATATATATAGAAAAA-----------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
AT------------------TATTCAAGATTTTT-TTAAAATTTATTTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGAAATTCA--------------------------------------------------------------------AAATSizeHit CountTotal NormTotal
No Reads
droEle1
TA------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAT----TTATTTAT--AAAAAAAATATAAA--------------------------------------------------------------------AASizeHit CountTotal NormTotal
No Reads
dm3
AA------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTAA--ATAAAAAAAAAAAATAAATAAA----------------------------------------------------------------ATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
AA------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTAA--ATAAAAAAAAAAAAT.........................................................................23130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AAAAAAAAAAAATAAATA....................................................................18200.0510000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AA------------------T--------------------------------------------------------------------------------------------------------------------TCTAGCTACGTAAAGATTTGTAATTTTAATTTTATAA----------------------------------AT--AAAAAAAAAAAAAAAAAGATTCAATATTAGA----AATAAGATTCAATGTAGGCGAC---------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................TTAGA----AATAAGATTCA......................................1620.50100000010000000000
................................................................................................................................................................................................................................................AGA----AATAAGATTCAATGTAGGCGAC---------------------------2520.50100010000000000000
....................T--------------------------------------------------------------------------------------------------------------------TCTAGCTACGTAAAGATTTGTAATT......................................................................................................................................2630.33100000010000000000
.........................................................................................................................................TCTAGCTACGTAAAGATTTGTAATTT.....................................................................................................................................2630.33100000010000000000
....................T--------------------------------------------------------------------------------------------------------------------TCTAGCTACGTAAAGATTTGTAATTT.....................................................................................................................................2730.33100000000001000000
AA------------------T--------------------------------------------------------------------------------------------------------------------TCTAGCTACGTAAAGATT.............................................................................................................................................2130.33100000000001000000
...........................................................................................................................................TAGCTACGTAAAGATTTGTAATTTTAA..................................................................................................................................2740.25100000000000010000
..................................................................................................................................................GTAAAGATTTGTAATTTTAA..................................................................................................................................2070.14100000000001000000
................................................................................................................................................ACGTAAAGATTTGTAATT......................................................................................................................................1870.14100000000001000000
...................................................................................................................................................TAAAGATTTGTAATTT.....................................................................................................................................16190.05100000000100000000
.....................................................................................................................................................................................................................AAAAAAAAAAAAAAAAG..................................................................17200.05100000000000001000
droSec2
TCAC-------------------------------------------------------------------------------------------------------------------------------------TCGCGAAGCGAACGGATCTTTAATAATTATATTTACAATATATATATATATAT--ATATAT----TTTTTTTTATGAAAATTA-TTA--------------------------------------------------------------------AAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
TCAC-------------------------------------------------------------------------------------------------------------------------------------TCGCGAAGCGAACGGATCTTT..........................................................................................................................................25200.1022000
TCAC-------------------------------------------------------------------------------------------------------------------------------------TCGCGAAGCGAACGGA...............................................................................................................................................20200.0511000
droWil2
TGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGTAGATTAGCAAAAGA----TAAT--ATAGCAAAAATACAGGAAGAAAAT---------------------------------------------------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.GAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGTAGATTAGCAAAAGA----T.............................................................................................2480.13101000
.............................................................................................................................................................................................................T--ATAGCAAAAATACAGGAAGA....................................................................2180.13100010
.............................................................................................................................................................................................................T--ATAGCAAAAATACAGGAAGAAAA.................................................................2480.13101000
...A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGTAGATTAGCAAAAGA----TA............................................................................................2380.13101000

Generated: 05/18/2015 at 05:41 AM