ID:

dan_2811

 Coordinate:

scaffold_13339:2704526-2704676 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.7 -4.7 -4.7

Flybase annnotation

exon [dana_GLEANR_14558:2]; CDS [Dana\GF13973-cds]; intron [Dana\GF13973-in]

No Repeatable elements found

mature
  1. scaffold_702:163-188 -
  2. scaffold_712:2250-2275 -
  3. scaffold_1005:1048-1073 +
  4. scaffold_8226:126-151 +
  5. scaffold_8982:7130-7155 -
  6. scaffold_9007:1193-1218 -
  7. scaffold_9359:1773-1798 -
  8. scaffold_12084:1668-1693 -
  9. scaffold_12169:6995-7020 +
  10. scaffold_13082:3092562-3092587 -
  11. scaffold_13111:183308-183333 -
  12. scaffold_13111:185183-185208 -
  13. scaffold_13234:9800-9825 -
  14. scaffold_13266:2216111-2216136 +
  15. scaffold_13266:12762660-12762685 +
  16. scaffold_13266:19248167-19248192 -
  17. scaffold_13337:22164079-22164104 -
  18. dan_2811  scaffold_13339:2704620-2704645 +
  19. scaffold_13340:16717639-16717664 -
  20. scaffold_13417:3477768-3477793 +
  21. scaffold_12276:10664-10689 +
  22. scaffold_12916:5192484-5192509 +
  23. scaffold_13010:442466-442491 +
  24. scaffold_12392:67527-67552 +
  25. scaffold_13250:1477388-1477413 +
star
  1. scaffold_712:2219-2244 -
  2. scaffold_8226:157-182 +
  3. scaffold_9007:1162-1187 -
  4. scaffold_9359:1742-1767 -
  5. scaffold_12084:1637-1662 -
  6. scaffold_12392:67558-67583 +
  7. scaffold_13010:442497-442522 +
  8. scaffold_13082:3092531-3092556 -
  9. scaffold_13111:881529-881554 -
  10. scaffold_13234:9769-9794 -
  11. scaffold_13248:4464517-4464542 +
  12. scaffold_13250:1477419-1477444 +
  13. scaffold_13260:1119941-1119966 +
  14. scaffold_13266:2216140-2216165 +
  15. scaffold_13266:12762691-12762716 +
  16. scaffold_13266:19248136-19248161 -
  17. scaffold_13282:52492-52517 +
  18. scaffold_13339:197829-197854 +
  19. dan_2811  scaffold_13339:2704651-2704676 +
  20. scaffold_13340:16717608-16717633 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAACATTCATCGAAGCTTTGGACGTTTGCGATGAAACATTCTATCCAACGGTATACCGATTTCTTCAGATCGGTGCAACACTGCCAGTAACAGTGGCTTCGAGCGAACGGTCGTTCTCTACACTACGAAGATTGAAGACATATTTACGCAATAAGACTGGAGAGCAAAGATTGAATGGATTGGCGCTTCTGAACATTCACCGGGATCTGGAAGTAACCTCTGACGCAATATTGAGTATAATGGCCCAAAAA
************************************************************************************************************************************************..............((((.((...((((.....)))).)).))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V055
head
 V106
head
 V039
embryo
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAGA................................................................................. 26 0 20 0.50 10 6 1 3 0 0 0
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCTGG......................................... 25 0 20 0.25 5 2 2 1 0 0 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCACC.................................................. 26 0 20 0.25 5 2 3 0 0 0 0
...............................................................................................................................................TTACGCAATAAGACTGGAGAGC...................................................................................... 22 0 20 0.25 5 4 0 1 0 0 0
....................................................................................................................................................................CAAAGATTGAATGGATTGGCGC................................................................. 22 0 17 0.24 4 1 2 1 0 0 0
................................................................................................................................................TACGCAATAAGACTGGAGAGCAA.................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAGATT............................................................................... 28 0 20 0.20 4 3 1 0 0 0 0
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACCTCTG............................. 27 0 17 0.18 3 3 0 0 0 0 0
...........................................TCCAACGGTATACCGATTTCTTCAGA...................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0
......TCATCGAATCTTTGAACGC.................................................................................................................................................................................................................................. 19 3 20 0.15 3 2 0 0 1 0 0
..........................................................................................................................................................................................TTCTGAACATTCACCGGGATCTGGAAG...................................... 27 0 20 0.15 3 3 0 0 0 0 0
............................................................................................................................................TATTTACGCAATAAGACTGGAGAGC...................................................................................... 25 0 20 0.15 3 0 3 0 0 0 0
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCTG.......................................... 24 0 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................................................................................CGCTTCTGAACATTCACCGGGATCTG.......................................... 26 0 16 0.13 2 2 0 0 0 0 0
...................................................................................................................................................................................TTGGCGCTTCTGAACATTCACCGGGA.............................................. 26 0 16 0.13 2 1 1 0 0 0 0
....................................................................................................................................................................................TGGCGCTTCTGAACATTCACCGGGATC............................................ 27 0 16 0.13 2 2 0 0 0 0 0
....................................................................................................................................................................................TGGCGCTTCTGAACATTCACCGGGA.............................................. 25 0 16 0.13 2 1 1 0 0 0 0
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACCTCT.............................. 26 0 17 0.12 2 1 1 0 0 0 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCACCG................................................. 27 0 18 0.11 2 2 0 0 0 0 0
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGAAC......................................................... 25 0 19 0.11 2 1 0 0 0 1 0
.............................................................................................................................................................................AATGGATTGGCGCTTCTGAACATTCACC.................................................. 28 0 19 0.11 2 0 2 0 0 0 0
...........................................................................................................................................................................TGAATGGATTGGCGCTTCTGAACATT...................................................... 26 0 19 0.11 2 2 0 0 0 0 0
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGA........................................................... 23 0 19 0.11 2 2 0 0 0 0 0
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGAAG...................................... 24 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................TTCGAGCGAACGGTCGTTCTCTACACTAC............................................................................................................................. 29 0 20 0.10 2 2 0 0 0 0 0
....................................................................................................................TCTACACTACGAAGATTGAAGACA............................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
............................................CCAACGGTATACCGATTTCTTCAGA...................................................................................................................................................................................... 25 0 20 0.10 2 1 0 0 0 0 1
............................................................................................................................................................................CAGTGGATTAGCGCTTCTGA........................................................... 20 3 20 0.10 2 0 0 0 0 2 0
.......................................................................................................................................................TAAGACTGGAGAGCAAAGATTGAATGG......................................................................... 27 0 20 0.10 2 0 2 0 0 0 0
.....................................................................TCGGTGCAACACTGCCAGTAACAG.............................................................................................................................................................. 24 0 20 0.10 2 1 1 0 0 0 0
................................................................................................................................................TACGCAATAAGACTGGAGAGCA..................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
............................................................................................................................................................................................CTGAACATTCACCGGGATCTGGAAGT..................................... 26 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................................................................TCTGAACATTCACCGGGATCTGGAAG...................................... 26 0 20 0.10 2 1 0 1 0 0 0
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAA................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
.................................AAACATTCTATCCAACGGTATACC.................................................................................................................................................................................................. 24 0 20 0.10 2 1 1 0 0 0 0
...............................................................................................................................................TTACGCAATAAGACTGGAGAGCAAA................................................................................... 25 0 20 0.10 2 1 1 0 0 0 0
....................................................................................................................................TTAAGACATATTTACGCAATAAGACT............................................................................................. 26 1 20 0.10 2 0 2 0 0 0 0
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAGAT................................................................................ 27 0 20 0.10 2 2 0 0 0 0 0
............................................................TTCTTCAGATCGGTGCAACACTGCC...................................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0
.....................................................................................AGTAACAGTGGCTTCGAGCGA................................................................................................................................................. 21 0 20 0.10 2 0 0 0 0 2 0
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAG.................................................................................. 25 0 20 0.10 2 0 1 1 0 0 0
......................................................................................................................................................................................GCGCTTCTGAACATTCACCGGGATCTG.......................................... 27 0 16 0.06 1 1 0 0 0 0 0
.........................................................................................................................................................................................................GGGATCTGGAAGTAACCTCTGACGC......................... 25 0 16 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................GGCGCTTCTGAACATTCACCGGGATCTG.......................................... 28 0 16 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................TTGGCGCTTCTGAACATTCACCGGGG.............................................. 26 1 16 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................................CGCTTCTGAACATTCACCGGGATC............................................ 24 0 16 0.06 1 0 1 0 0 0 0
........................................................................................................................................................................................................CGGGATCTGGAAGTAACCTCTGACG.......................... 25 0 16 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................GGCGCTTCGGAACATTCACCGGG............................................... 23 1 16 0.06 1 1 0 0 0 0 0
..................................................................................................................................................................................ATTGGCGCTTCTGAACATTCACCGGGA.............................................. 27 0 16 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................................CACCGGGATCTGGAAGTAACCTCTGA............................ 26 0 16 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACCTC............................... 25 0 17 0.06 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CCGGGATCAGGAAGTAACCTCTG............................. 23 1 17 0.06 1 1 0 0 0 0 0
....................................................................................................................................................................CAAAGATTGAATGGATTGGCG.................................................................. 21 0 17 0.06 1 0 0 1 0 0 0
.................................................................................................................................................................GGGCAAAGATTGAATGGATTGGCGC................................................................. 25 1 17 0.06 1 0 1 0 0 0 0
................................................................................................................................................................ATAGCAAAGATTGAATGGATTGGC................................................................... 24 1 17 0.06 1 0 1 0 0 0 0
....................................................................................................................................................................AAAAGATTGAATGGATTGGCGC................................................................. 22 1 17 0.06 1 0 0 0 0 1 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCACCGG................................................ 28 0 17 0.06 1 0 1 0 0 0 0
....................................................................................................................................................................................................TCACCGGGATCTGGAAGTAACCTCTG............................. 26 0 17 0.06 1 1 0 0 0 0 0
.................................................................................................................................................................................GATTGGCGCTTCTGAACATTCACCGG................................................ 26 0 17 0.06 1 1 0 0 0 0 0
..............................................................................................................................................................................CTGGATTGGCGCTTCTGAACATTCACCG................................................. 28 1 18 0.06 1 1 0 0 0 0 0
........................................................................................................................................................................GATTGAATGGATTGGCGCTTCTGAA.......................................................... 25 0 18 0.06 1 0 1 0 0 0 0
.....................................................................................................................................................................AAAGATTGAATGGATTCGCTC................................................................. 21 2 18 0.06 1 0 0 0 0 0 1
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGAACAT....................................................... 27 0 19 0.05 1 1 0 0 0 0 0
..........CGAAGCTTTGGACGTTTGCGATGAA........................................................................................................................................................................................................................ 25 0 19 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................TTGAATGGATTGGCGCTTCTG............................................................ 21 0 19 0.05 1 1 0 0 0 0 0
.........TCGAAGCTTTGGACGTTTGCGATGAA........................................................................................................................................................................................................................ 26 0 19 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................TGAATGGATTGTCGCTTCTGAACATT...................................................... 26 1 19 0.05 1 0 0 1 0 0 0
....ATTCATCGAAGCTTTGGACGTTTGC.............................................................................................................................................................................................................................. 25 0 19 0.05 1 0 0 0 0 1 0
............................................................................................................................................................................GAATGGATTGGCGCTTCTGAACATT...................................................... 25 0 19 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGAACATT...................................................... 28 0 19 0.05 1 1 0 0 0 0 0
.AACATTCAGCGAAGCTTTGGACGT.................................................................................................................................................................................................................................. 24 1 19 0.05 1 1 0 0 0 0 0
.AACATTCATCGAAGCTTTGGACG................................................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0 0 0
...CATTCATCGAAGCTTTGGACGTTTG............................................................................................................................................................................................................................... 25 0 19 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................GAATGGATTCGCGCTTCTGAACATT...................................................... 25 1 19 0.05 1 1 0 0 0 0 0
...............................................................................................................................................TGACGCAATAAGACTGGAGAGCAAAG.................................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................TAACAGGGGGTTCGAGGGAA................................................................................................................................................ 20 3 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................AAGATTGAAGACATATGG.......................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0
.........................................................................TGCAACACTGCCAGTAACAGTGGC.......................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
.................................................................CAGATCGGTGCAACACTGCCA..................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0
....................................................................................CAGTAACAGTGGCTTCGAGCGAACGGTC........................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................TGGTTTGTCGCTTCTGAACATTCAC................................................... 25 2 20 0.05 1 0 1 0 0 0 0
...................................................................................................................CTCTACACTACGAAGATTGAAGACATA............................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................GAACGGTCGTTCTCTACACTACGAA.......................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACC................................. 23 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................TTCTCTACACTACGAAGATTGAAC.................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................CATTCACCGGGATCTGGAAGCAACCT................................ 26 1 20 0.05 1 0 0 1 0 0 0
............................................CCAACGGTATACCGATTTCTTCAG....................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................TCTGAACAGTCACCGGGATCTGGAAG...................................... 26 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................ACGCAATAAGACTGGAGAGCAAAGA................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
.....TTCATCGAAGCTTTGGACGTTTGCGA............................................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
.....................................................................TCGGTGCAACAATGCCAGTAACAGT............................................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
.................................................................................TGCCAGTAACCGTGGCTTCGAGCGAAC............................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................ATGGATTGGCGCTTCTGAACATTCA.................................................... 25 0 20 0.05 1 0 0 0 0 0 1
.............................................................................................................................................................................................................TCTGGAAGTAACCTCTGACGCAATATTG.................. 28 0 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCTGGA........................................ 26 0 20 0.05 1 1 0 0 0 0 0
......................................................................................GGAACAGTGGCTTCGAGCGAACGGTCGT......................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................ACGCAATAAGACTGGAGAGCAAAG.................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
...........................................TCAAACGGTATACCGATTTCTTCAGATC.................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.................................................................................TGCCAGTAACAGTGGCTTCGAGCGAAC............................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
...............................................................................ACTGCCAGTAACAGTGGCTTCGAGCG.................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.................................................................CAGATCGGTGCAACACTGCCAG.................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0
.................................................................................TTCCAGTAACAGTGGCTTCGAGCGAAC............................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................TTACGCAATAAGCCTGGAGAGC...................................................................................... 22 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................GTTCTCTACACTACGAAGATTGAAGACA............................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................TGACGCAATAAGACTGGAGAGC...................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................GCGAACGGTCGTGCTCTACACTACGAAA......................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................TTACGCAATAAGACTGGAGAGCAAAGAT................................................................................ 28 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATC............................................ 22 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................TGAATGGATTGGCGCTTC.............................................................. 18 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................AGACTGGAGAGCAAAGATTGAATG.......................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................TTCTGAACATTCACCGGGATCTG.......................................... 23 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................CTGAAGACATATTTACGCAATAAGA............................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...............................................................................ACTGCCAGTAACAGTGGCTTCGAGC................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
............................................CCAACGGTATACCGATTTCTTCAGATC.................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGAAGTAA................................... 27 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................AGAGCAAAGATTGAATGGATTGG.................................................................... 23 0 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................GACTGGAGAGCAAAGATTGAATGGAT....................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
.............................................................TCTTCAGATCGGTGCAACACTGCCAGT................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................TAAGACTGGCGGGCAAAGATG............................................................................... 21 3 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................................................AACATTCACCGGGATCTGGAAGTAACC................................. 27 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................GATTGGCGCTTCTGAACATTCACC.................................................. 24 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTC.............................................................. 20 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................TGCACCGGGATCTGGAAGTAACC................................. 23 1 20 0.05 1 0 1 0 0 0 0
............................................CCAACGGTATACCGATTTCTTCAGT...................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTGACC.................................................. 26 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................TACACTACGAAGATTGAAGACATATT........................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................CAGTAGCGTCGAGCGAACGG............................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0 0
.....................................................................TCGGTGCAACACTGCCAGTAACAGGGGCC......................................................................................................................................................... 29 2 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................CTGAACATTCACCGGGATCTGGAAG...................................... 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................TCACCGGGATCTGGAAGTAACCT................................ 23 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................TATTTACGCAATAAGACTGGAGAAC...................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................CTCTGACGCAATATTGAGTATAATGGCCC..... 29 0 20 0.05 1 1 0 0 0 0 0
..................................................................................GCCAGTAACAGTGGCTTCGAGCGAACGG............................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................TTATGCAATAAGACTGGAGAGC...................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................ACACTACGAAGGTTGAAGACATATT........................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0
............................................................................................................................................................................GTATGGATTGGCGCTTCTGA........................................................... 20 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................ATCGATTGGCGCTTCTGAACATT...................................................... 23 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................TACACTACGAAGATTGAAGACATA............................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................CTCTACACTACGAAGATTGAAGACA............................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCT........................................... 23 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................AAGACTGGAGAGCAAAGAT................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................TGGAGGGCAAAGATTGAATGGATTGG.................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................AAGACTGGAGAGCAAAGATTGGATGGA........................................................................ 27 1 20 0.05 1 1 0 0 0 0 0
.................................................................................CGCCAGTAACAGTGGCTTCGAGCGAAC............................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................TCTGAACATTCACCGGGATCTGGAAGT..................................... 27 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................AAGACTGGAGAGCAAAGATTGAATGG......................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCT............................................................. 21 0 20 0.05 1 1 0 0 0 0 0
......TCATCGAAGCTTTGGACGTTTGCGA............................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGA........................................ 22 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGAAGTAAC.................................. 28 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCA.................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................TTGATTGGCGCTTCTGAACATTCACC.................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................ACCGTGGCTCAGAGCGAAC............................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
............................................................................................GTGGCTTCGAGCGAACGGTCGTTC....................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
................................................................TCAGATCGGTGCAACACTGCCAGT................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0 0
......TCATCGAATCTTTGAACG................................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................TTACGCAATAAGACTGGAGAGCAA.................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACA........................................................ 20 0 20 0.05 1 1 0 0 0 0 0
.........................................TATCCAACGGTATACCGATTTCTTCAGA...................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................TTCTGAACTTTCACCGGGATCTGGAAG...................................... 27 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................TACACTACGAAGATTGGAGACATATT........................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 1
.....................................................................TCGGTGCAACACTGCCAGTAACAGT............................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................TGCATTGGCGCTTCTGAACATTCAC................................................... 25 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................CACTACGAAGATTGAAGACATATT........................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...............................................................TTCAGATCGGTGCAACACTGCCAGT................................................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 1
.......................................................................................................................................................TAAGACTGGCGGGTAAAGAT................................................................................ 20 3 20 0.05 1 0 0 0 1 0 0
............................................................TTCTTCAGATCGGTGCAACACCTCCATT................................................................................................................................................................... 28 3 20 0.05 1 0 0 0 0 0 1
...................................................................................CCAGTAACAGTGGCTTCGAGCGAACGG............................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCAC................................................... 25 0 20 0.05 1 0 1 0 0 0 0
............................................................TTCTTCAGATCGGTGCAACACTGAC...................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................TAAGACTGTAGGGTAAAGAT................................................................................ 20 3 20 0.05 1 0 0 0 1 0 0
.......................................................................................TAACAGTGGCTTCGAGCGAACGGTCG.......................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
....ATTCATCGAATCTTTGAACGC.................................................................................................................................................................................................................................. 21 3 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................................GCAATATTGAGTATAATGGCCC..... 22 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................GGAGAGCAAAGATTGAATGGATT...................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................CTCTACACTACGAAGATTGAAGACAT.............................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................TATTTACGCAATAAGACTGGAGAGCA..................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................TGTACGCAATAAGACTGGAGAGC...................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.................................................................................TGCCAGTAACAGTGGCTTCGAGCGT................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
..........CGAAGCTTTGGACGTTTGCGATG.......................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................GGTCGTTCGCTACACTACGAAGA........................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
..................................................................................GCCAGTAAGAGTGGCTTCGAGCG.................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
.........................................................GGCTTCTTCAGATCGGTGCAACACTGC....................................................................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0
.................................................................................TTCCAGTAACAGTGGCTTCGAGCG.................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0
............................................................TTCTTCAGATCGGTGCAACACTGCCAGT................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..........CGAAGCTTTGGACGTTTGCGA............................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
..............................................................CTTCAGATCGGTGCAACACTGCCAGT................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................TCTACACTACGAAGATTGAAGACAA.............................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................TCGTTCTCTACACTACGAAGATTGAA................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.................................AGACATTATATCCAACGGTATACC.................................................................................................................................................................................................. 24 2 20 0.05 1 0 1 0 0 0 0
....................................................................................................................TCTTCACTACGAAGATTGAAGACATATT........................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................................................TGACGCAATATTGAGTATAATGG........ 23 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................TTGAATGGATTGGCGCTTCTTAACA........................................................ 25 1 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................TTGAAGACATATTTACGCAATAAGA............................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
....................................CATGCTATCCAACGGTATACCGATTTC............................................................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................TTCTGAACATTCACCGGGATCTGG......................................... 24 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

TTTGTAAGTAGCTTCGAAACCTGCAAACGCTACTTTGTAAGATAGGTTGCCATATGGCTAAAGAAGTCTAGCCACGTTGTGACGGTCATTGTCACCGAAGCTCGCTTGCCAGCAAGAGATGTGATGCTTCTAACTTCTGTATAAATGCGTTATTCTGACCTCTCGTTTCTAACTTACCTAACCGCGAAGACTTGTAAGTGGCCCTAGACCTTCATTGGAGACTGCGTTATAACTCATATTACCGGGTTTTT
**************************************************..............((((.((...((((.....)))).)).))))............************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
 V055
head
..........................ACGCTACTTTGTAAGATAGGTTGCCATA..................................................................................................................................................................................................... 28 0 19 0.53 10 6 4 0 0 0 0
.............................CTACTTTGTAAGATAGGTTGCCATA..................................................................................................................................................................................................... 25 0 19 0.47 9 0 8 0 1 0 0
...................................................................................................GCTCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 26 0 20 0.45 9 6 0 3 0 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCCCTAGACCT........................................ 27 0 20 0.35 7 3 4 0 0 0 0
............................GCTACTTTGTAAGATAGGTTGCCATA..................................................................................................................................................................................................... 26 0 19 0.32 6 6 0 0 0 0 0
.....................................................................................................................................................................................CCGCGAAGACTTGTAAGTGGCCCT.............................................. 24 0 16 0.25 4 1 3 0 0 0 0
...............................................................................................CGAAGCTCGCTTGCCAGCAAGAGATGT................................................................................................................................. 27 0 20 0.20 4 4 0 0 0 0 0
.........................................................................................................................................................................................GAAGACTTGTAAGTGGCCCTAGACCT........................................ 26 0 20 0.20 4 4 0 0 0 0 0
...................................................................................................................................................................................................................TCATTGGAGACTGCGTTATAACTCAT.............. 26 0 20 0.20 4 2 1 1 0 0 0
......................................................................................................................................................................................CGCGAAGACTTGTAAGTGGCCCTAGAC.......................................... 27 0 16 0.19 3 1 1 0 1 0 0
......................................................................................................................................................................................CGCGAAGACTTGTAAGTGGCCCT.............................................. 23 0 16 0.19 3 0 2 1 0 0 0
.TTGTAAGTAGCTTCGAAACCTGCAA................................................................................................................................................................................................................................. 25 0 19 0.16 3 0 3 0 0 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCCCTAGAC.......................................... 25 0 20 0.15 3 0 3 0 0 0 0
...........................................................................................................................................................................................AGACTTGTAAGTGGCCCTAGACCT........................................ 24 0 20 0.15 3 0 2 0 1 0 0
.................................................................GTCTAGCCACGTTGTGACGGTCATTGT............................................................................................................................................................... 27 0 20 0.15 3 3 0 0 0 0 0
..............................................................................................CCGAAGCTCGCTTGCCAGCAAGAGAT................................................................................................................................... 26 0 20 0.15 3 2 1 0 0 0 0
......................................................................................................................................................................................CGCGAAGACTTGTAAGTGGCCCTAGA........................................... 26 0 16 0.13 2 1 1 0 0 0 0
.....................................................................................................................................................................................CCGCGAAGACTTGTAAGTGGCCCTAGAC.......................................... 28 0 16 0.13 2 1 1 0 0 0 0
.......................................................................................................................................................................TCTAACTTACCTAACCGCGAAGACTTGT........................................................ 28 0 18 0.11 2 2 0 0 0 0 0
...........................CGCTACTTTGTAAGATAGGTTGCCATA..................................................................................................................................................................................................... 27 0 19 0.11 2 1 0 1 0 0 0
.............................................................................................................................................................................TTACCTAACCGCGAAGACTTGTAAGT.................................................... 26 0 19 0.11 2 2 0 0 0 0 0
.........................................................................................................................................................TCTGACCTCTCGTTTCTAACTTACCT........................................................................ 26 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................TCACCGAAGCTCGCTTGCCAGCAAGAG..................................................................................................................................... 27 0 20 0.10 2 1 1 0 0 0 0
...........................................................................................................................................................................................AGACTTGTAAGTGGCCCTAGACCTTCAT.................................... 28 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................TCACCGAAGCTCGCTTGCCAGCAAG....................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
..................................................................................CGGTCATTGTCACCGAAGCTCGCT................................................................................................................................................. 24 0 20 0.10 2 1 1 0 0 0 0
........................................................................................................................................CTGTATAAATGCGTTATTCTGACCTCT........................................................................................ 27 0 20 0.10 2 0 2 0 0 0 0
..............................................................................................................................................................................................CTTGTAAGTGGCCCTAGACCTTCAT.................................... 25 0 20 0.10 2 0 2 0 0 0 0
................................................................................................................................................................................................................CCTTCATTGGAGACTGCGTTATAACTC................ 27 0 20 0.10 2 0 2 0 0 0 0
...................................................................CTAGCCACGTTGTGACGGTCATTGT............................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0
....................................................................TAGCCACGTTGTGACGGTCATTGT............................................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0
...............................................................................................CGAAGCTCGCTTGCCAGCAAGAGA.................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0
................................................................AGTCTAGCCACGTTGTGACGGTCAT.................................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................GCTTCTAACTTCTGTATAAATGCGTTAT.................................................................................................. 28 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................................................CTAACTTCTGTATAAATGCGTTATT................................................................................................. 25 0 20 0.10 2 1 0 0 1 0 0
....................................................................................GTCATTGTCACCGAAGCTCGCTTG............................................................................................................................................... 24 0 20 0.10 2 1 0 0 1 0 0
.........................................................................................................................................................................................GAAGACTTGTAAGTGGCCCTAGACCTT....................................... 27 0 20 0.10 2 2 0 0 0 0 0
...................................................................CTAGCCACGTTGTGACGGTCATT................................................................................................................................................................. 23 0 20 0.10 2 0 2 0 0 0 0
......................................................................................................CGCTTGCCAGCAAGAGATGTGATGCTT.......................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
...................................................................................GGTCATTGTCACCGAAGCTCGCTTGC.............................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................................................................................................................TGGAGACTGCGTTATAACTCAT.............. 22 0 20 0.10 2 1 1 0 0 0 0
..........................ACGCTACTTTGTAAGATAGGTTGCCAT...................................................................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0 0
.........................................................................................TGTCACCGAAGCTCGCTTGCCAGCAA........................................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................ACCTTCATTGGAGACTGCGTTATAACTC................ 28 0 20 0.10 2 1 0 0 0 1 0
.....................................................................................................TCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 24 0 20 0.10 2 1 0 1 0 0 0
..................................................................................................AGCTCGCTTGCCAGCAAGAGATGT................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................................................................................................................CCCTAGACCTTCATTGGAGACTGCGT........................ 26 0 16 0.06 1 0 0 0 0 1 0
.......................................................................................................................................................................................GCGAAGACTTGTAAGTGGCCCTAGAC.......................................... 26 0 16 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................CCGCGAAGACTTGTACGTGGCCCT.............................................. 24 1 16 0.06 1 1 0 0 0 0 0
.....................................................................................................................................................................................CCGCGAAGACTTGTAAGTGGCCCTAG............................................ 26 0 16 0.06 1 0 1 0 0 0 0
....................................................................................................................................................................................TCCGCGAAGACTTGTAAGTGGCCCTAG............................................ 27 1 16 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................AACCGCGAAGACTTGTAAGCGGCCCTAG............................................ 28 1 16 0.06 1 1 0 0 0 0 0
.......................................................................................................................................................................................GCGAAGACTTGTAAGTGGCCCTAG............................................ 24 0 16 0.06 1 0 0 1 0 0 0
TTTGTAAGTAGCTTCGAAACCTGAAA................................................................................................................................................................................................................................. 26 1 16 0.06 1 0 1 0 0 0 0
................................................................................................................................................................................CCTAACCGCGAAGACTTGTAAGTGGCCCT.............................................. 29 0 16 0.06 1 1 0 0 0 0 0
......................................................................................................................................................................................CGCGAAGACTTGTAAGTGGCCCTAG............................................ 25 0 16 0.06 1 0 1 0 0 0 0
......................................................................................................................................................................................CGCGAAGACTTGTAAGTGGCCCTAGACC......................................... 28 0 16 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................................GCGAAGACTTGTAAGTGGCCCTAGACC......................................... 27 0 16 0.06 1 1 0 0 0 0 0
.................................................................................................................................................................................CTAACCGCGAAGACTTGTAAGTGGCCC............................................... 27 0 16 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................................GCGAAGACTTGTAAGTGGCCCTAGACCT........................................ 28 0 16 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................AAGTGGCCCTAGACCTTCATTGGAGA.............................. 26 0 17 0.06 1 1 0 0 0 0 0
..........................................................................................................................................................................................................CCTAGACCTTCATTGGAGACTGCGT........................ 25 0 18 0.06 1 0 0 0 1 0 0
.......................................................................................................................................................................TCTAAATTACCTAACCGCGAAGACTTGT........................................................ 28 1 18 0.06 1 0 0 1 0 0 0
........................................................................................................................................................................CTAACTTACCTAACCGCGAAGACTTGT........................................................ 27 0 18 0.06 1 1 0 0 0 0 0
..........................................................................................................................................................................................................CCTAGACCTTCATTGGAGACTGCGTT....................... 26 0 18 0.06 1 1 0 0 0 0 0
.................................................................................................................................................................................CTAACCGCGAAGACTTGTAAGTGGC................................................. 25 0 18 0.06 1 1 0 0 0 0 0
...GTAAGTAGCTTCGAAAACTGCAAA................................................................................................................................................................................................................................ 24 1 19 0.05 1 0 1 0 0 0 0
ATTGTAAGTAGCTTCGAAACCTGCAA................................................................................................................................................................................................................................. 26 1 19 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................ACTTACCTAACCGCGAAGACTTGT........................................................ 24 0 19 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................CTTACCTAACCGCCGAGACTTGT........................................................ 23 2 19 0.05 1 1 0 0 0 0 0
.........................TACGCTACTTTGTAAGATAGGTTGCCAGA..................................................................................................................................................................................................... 29 2 19 0.05 1 0 1 0 0 0 0
.TTGTAAGTAGCTTCGAAACCTG.................................................................................................................................................................................................................................... 22 0 19 0.05 1 0 1 0 0 0 0
.............................CTACTTTGTAAGATAGGTTGCCAGA..................................................................................................................................................................................................... 25 1 19 0.05 1 0 1 0 0 0 0
.TTGTAAGTAGCTTCGAAACCTGCA.................................................................................................................................................................................................................................. 24 0 19 0.05 1 0 1 0 0 0 0
..........................ACGCTACTTTGTAAGATAGGTTGCCAGA..................................................................................................................................................................................................... 28 1 19 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................................TTACCTAACCGCGAAGACTTGTAAG..................................................... 25 0 19 0.05 1 1 0 0 0 0 0
....................................................................................................CTCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCCCTAGACC......................................... 26 0 20 0.05 1 0 1 0 0 0 0
...................................................................CTAGCCACTTTGTGACGGTCATTGTCAC............................................................................................................................................................ 28 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................CCAGCAAGAGATGTGATGCTTCTAG...................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.....................................................................AGCCACTTTGTGACGGTCATTGT............................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................GAAGACTTGTAAGTGGCCCTAGACGT........................................ 26 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................TGTCACCGAAGCTCGCTTGCCAGCA......................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..................................TTGTAAGATAGGTTGCCATATGGCT................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
...........................CGCTAGTTTGTAAGATAGGTTGCCATA..................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................GCTCGGTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 26 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................GTAAGTGGCCCTAGACCTTCATT................................... 23 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................TGATGCTTCTAACTTCTGTATAAAT......................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................CTCGCTTGCCAGCAAGAGATGTGATGC............................................................................................................................ 27 0 20 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................................................................AGACCTTCATTGGAGACTGCGTTATAA................... 27 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................TCATTGTCACCGAAGCTCGCTTGC.............................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
..............................................................................GTGACGGTCATTGTCACCGAAGCTCGCT................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................CGATGCTTCTAACTTCTGTAT............................................................................................................. 21 1 20 0.05 1 0 1 0 0 0 0
.................................................................................ACGGTCATTGTCACCGAAGCTCGCT................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................TACCTAACCGCGAAGACTTGTAAGT.................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................AAAGAAGTCTAGCCACGTTGTGACTG...................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................TTGCCAGCAAGAGATGTGATGCTTC......................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.............................................................AGAAGTCTAGCCACGTTGTGACGGT..................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
................................................................AGTCTAGCCACGTTGTGACGGTCA................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................TTCTAACTTCTGTATAAATG........................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................ATCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 25 1 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCGCTAGACCT........................................ 27 1 20 0.05 1 1 0 0 0 0 0
........................................................GCTAAAGAAGTCTAGCCACGTT............................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CATTGGAGACTGCGTTATAACTCATTT............ 27 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................AAATGCGTTATTCTGACCTCTCGTTTCT................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................CAGACCTCTCGTTTCTAACTTACCTAAC..................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
........................................................................................TTGTCACCGAAGCTCGCTTGCCAGCAA........................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................CTTCTAACTTCTGTATAAATGCGTTATT................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................CTGTATAAATGCGTTATTCTGACTTCT........................................................................................ 27 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................GATGTGATGCTTCTAACTTCTGTATA............................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
....................................................................................GTCATTGTCACCGAAGCTCGCTTGCC............................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................CTCGCTTGCCAGCAAGAGATGTGATGCT........................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
...................................TGTAATATAGGTTGCCATATGGCTAAA............................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
..................................................................................CGGTCATTGTCACCGAAGCTCGCTT................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
..................................................................TCTAGCCACGTTGTGACGGTCATTGT............................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................GTCATTGTCACCGAAGCTCGCTTGC.............................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................AGACCTTCATTGGAGACTGCGTT....................... 23 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................ACTCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 26 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................TGATGCTTCTAACTTCTGTAT............................................................................................................. 21 0 20 0.05 1 0 0 1 0 0 0
.................................................................................................AAGCTCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................TCGCTTGCCAGCAAGAGATGTGATGCT........................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
....................................................................................GTCATTGTCACCGAAGCTCGCT................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................AGACCTTCATTGGAGACTGCGTTAT..................... 25 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................CTGACCTCTCGTTTCTAACT............................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................ATAAATGCGTTATTCTGACCTCTCGTTT................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................GTCACCGAAGCTCGCTTGCCAGCAA........................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................GCTCGCTTGCCAGCAAGGGATGTGAT.............................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
...................................................................................GGTCATTGTCACCGAAGCTCGCTTGCCA............................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................GTCACCGAAGCTCGCTTGCCAGCAAG....................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
............................................................................................CACCGAAGCTCGCTTGCCAGCAAGAGA.................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................GCTCTCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................TATTCTGACCTCTCGTTTCTAACTTAC.......................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................TACCTAACCGCGAAGACTTGTAAGC.................................................... 25 1 20 0.05 1 1 0 0 0 0 0
....................................................................CAGCCACGTTGTGACGGTCATTTT............................................................................................................................................................... 24 2 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................AAGACTTGTAAGTGGCCCTAGACCTT....................................... 26 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................TACCTAACCGCGAAGACTTGT........................................................ 21 0 20 0.05 1 1 0 0 0 0 0
.........................AACGCTACTTTGTAAGATAGGTTGCCAT...................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
....................................................................CAGCCACGTTGTGACGGTCATTGGC.............................................................................................................................................................. 25 2 20 0.05 1 0 1 0 0 0 0
..................................................................................................AGCTCGCTTGCCAGCAAGAGATGTGAT.............................................................................................................................. 27 0 20 0.05 1 0 0 0 1 0 0
................................................................................................GAAGCTCGCTTGCCAGCGAGAGATGT................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................CATTCATTGGAGACTGCGTTATAA................... 24 1 20 0.05 1 0 0 0 0 1 0
....................................................................................................................................................GTTATTCTGACCTCTCGTTTCTAACT............................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................TGTCACCGAAGCTCGCTTGCCAG........................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0
..................................................................TCTAGCCACGTTGTGACGGTCATTTT............................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................TGGAGACTGCGTTATAACTCATATTAC......... 27 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................TCTGACCTCTCGTTTCTAACT............................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCCCTAGA........................................... 24 0 20 0.05 1 0 1 0 0 0 0
........................................................................................TTGTCACCGAAGCTCGCTTGCCAG........................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................CCAGTCAGAGATGTGATGA............................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1
...................................................................CTAGCCACCTTGTGACGGTCATTGT............................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................ATTGTCACCGAAGCTCGCTTGACA............................................................................................................................................ 24 1 20 0.05 1 0 1 0 0 0 0
............................................................................................CACCGAAGCTCGCTTGCCAGCAAGA...................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................ATTGGAGACTGCGTTATAACTCAT.............. 24 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................................ACCTAACCGCGAAGACTTGTAAG..................................................... 23 0 20 0.05 1 1 0 0 0 0 0
........................................................GCTAAAGAAGTCTAGCCACGTTGTGAC........................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
...............................................................AAGTCTAGCCACGTTGTGACGGTCATTGT............................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................TCTAACTTCTGTATAAATGCGTTAT.................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................GAAGACTTGTAAGTGGCCCTAGAC.......................................... 24 0 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................................ACCTAACCGCGAAGACTTGTAAGGG................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................ATGCTTCTAACTTCTGTATAAAT......................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................CATTGGAGACTGCGTTATAACTCAT.............. 25 0 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................GACTTGTAAGTGGCCCTAGACCT........................................ 23 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................GACCTTCATTGGAGACTGCGTTATA.................... 25 0 20 0.05 1 0 0 0 0 1 0
.................................................................GTCTAGCCACGTTGTGACGGTCATTG................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCCCT.............................................. 21 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................GACCTTCATTGGAGACTGCGTTATAACT................. 28 0 20 0.05 1 0 1 0 0 0 0
...........................................AGGTTGCCATATGGCTAAAGA........................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................AGATGTGATGCTTCTAACTTCTGTAT............................................................................................................. 26 0 20 0.05 1 0 0 1 0 0 0
.....................................................................................................TCGCTTGCCAGCAAGAGATGTGA............................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...............................................................................CGACGGTCATTGTCACCGAAGCTCGCT................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0
.............................CTACTTTGTAAGATAGGTTGCCAT...................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................TACCTAACCGCGAAGACTTGTAAGTG................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................AGACCTTCATTGGAGACTGCGTTATAAC.................. 28 0 20 0.05 1 1 0 0 0 0 0
...............................................................................TGACGGTCATTGTCACCGAAGCTCGCTT................................................................................................................................................ 28 0 20 0.05 1 0 0 1 0 0 0
....................................................................TAGCCACGTTGTGACGGTCATTTT............................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................CGAAGACTTGTAAGTGGCCCTAGACGT........................................ 27 1 20 0.05 1 0 1 0 0 0 0
...................................CGTAAGATAGGTTGCCATATG................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
...............................................................................................CGAAGCTCGCTTGCCAGCTAGAGATGT................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................CCGAAGCTCGCTTGCCAGCAAGAGATGT................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................GCCAGCAAGAGATGTGATGCTTCTAACTT................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
................................................................................GACGGTCATTGTCACCGAAGCTCGCT................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................CGAAGCTCGCTTGCCAGCAAGAGATGTG................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
...............................................................................TGACGGTCATTGTCACCGAAGCTCG................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
................................................................................GACGGTCATTGTCACCGAAGCTCGC.................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................ACCTAACCGCGAAGACTTGTAAGTGG.................................................. 26 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................TTGTAAGTGGCCCTAGACCTTCAT.................................... 24 0 20 0.05 1 0 1 0 0 0 0
................................................................................GACGGTCATTGTCACCGAAGCTCTCTT................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................CTCGCTTTCCAGCAAGAGATGTGATGCTT.......................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0 0
...................................................................CTAGCCACGTTGTGACTGTCATTGT............................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.............................................GTTGCCATATGGCTAAAGAAGTCTAG.................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................GTTATTCTGACCTCTCGGTTCTAACT............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................TGTGACGGTCATTGTCACCGAAGCT..................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0
............................................................GAGAATACTAGCCACGTTG............................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0
...........................................................................................................GCCAGCAAGAGATGTGATGCTTCTAACT.................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................TGCCAGCAAGAGATGTGATGCTTCTA....................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................TAACCGCGAAGACTTGTAAG..................................................... 20 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13339:2704476-2704726 + dan_2811 AAACATTCATCGAAGCTTTGGACGTTTGCGATGAAACATTCTATCCAACGGTATACCGATTTCTTCAGATCGGTGCAACACTGCCAGTAACAGTGGCTTCGAGCGAACGGTCGTTCTCTACACTACGAAGATTGAAGACATATTTACGCAATAAGACTGGAGAGCAAAGATTGAATGGATTGGCGCTTCTGAACATTCACCGGGATCTGGAAGTAACCTCTGACGCAATATTGAGTATAATGGCCCAAAAA
droBip1 scf7180000396376:1574-1720 - GAACGATCATATTCGACT--------------------------------------------------------------------------------------------------------TTGAGGAGAATGAACGATTATTTGAGAAACACGAAGGGTCAAGAGCGTCTCAATGGTCTTTCATCTTTGAATATTCACCATCGCATAACTTTGACTGAAGACCAAATTCTCAGAAAGATTTTTGAAAAG
droFic1 scf7180000454130:20606-20856 - AATCATTTATTGAAGCTCTGGACGTTTGCAATAAAAGATTAAACACCCAAATATACAGGCTTCTTCAAATTTGTGGGACACTACCGGTCACAGTTGCCTCTAGTGAACGGTCCTTCTCCACTTTGCGAAGATTAAAAACTTACTTGCGCAATCGGACTGGAGAGGAACGGCTGAACGGACTGGCGCTTCTGAACATTCACAGAGATGTGAATGTTACTAGTGATCAAATTCTGGATATCCTCGCAAAAAGA
droRho1 scf7180000777767:62556-62559 - AAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004875:9933-10183 - ACACGTTCATTGATGCATTGAATCATTGTTGCGAGTCTTTTTACCCCACGGTTCATCGGTATTTGCAAATTGCTGCGACGCTTCCAGTCTCTGTTGCTCCGAGCGAACGCTCTTTTTCTTCACTAAGGAGGCTGAAAACGTACCTAAGAAGTACAATGGGTCAAGAGAGGTTAAACGGACTAGCTTTGCTCAACATCCACTCTAAAATTGAAGTCACTCCAGAGGATATTTTGAACGAAATGGCGAAAACA
droMoj3 scaffold_6498:3166795-3167045 + ACACGTTCATTGATGCATTGAATCATTGTTGCGAGTGTTTTTACCCCACGGTTCATCGGTATTTGCAAATTGCTGCGACGCTTCCAGTCTCTGTTGCTCCGAGCGAACGCTCTTTTTCTTCACTAAGGAGGCTGAAAACGTACCTAAGAAGTACAATGGGTCAAGAGAGGGTAAACGGACTAGCTTTGCTCAACATCCACTCTAAAATTGAAGTCACTCCAGAGGATATTTTGAACGAAATGGCGAAAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AAACATTCATCGAAGCTTTGGACGTTTGCGATGAAACATTCTATCCAACGGTATACCGATTTCTTCAGATCGGTGCAACACTGCCAGTAACAGTGGCTTCGAGCGAACGGTCGTTCTCTACACTACGAAGATTGAAGACATATTTACGCAATAAGACTGGAGAGCAAAGATTGAATGGATTGGCGCTTCTGAACATTCACCGGGATCTGGAAGTAACCTCTGACGCAATATTGAGTATAATGGCCCAAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAGA.................................................................................26200.5010610030
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCTGG.........................................25200.255220010
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCACC..................................................26200.255230000
...............................................................................................................................................TTACGCAATAAGACTGGAGAGC......................................................................................22200.255400010
....................................................................................................................................................................CAAAGATTGAATGGATTGGCGC.................................................................22170.244120010
................................................................................................................................................TACGCAATAAGACTGGAGAGCAA....................................................................................23200.204400000
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAGATT...............................................................................28200.204310000
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACCTCTG.............................27170.183300000
...........................................TCCAACGGTATACCGATTTCTTCAGA......................................................................................................................................................................................26200.153300000
..........................................................................................................................................................................................TTCTGAACATTCACCGGGATCTGGAAG......................................27200.153300000
............................................................................................................................................TATTTACGCAATAAGACTGGAGAGC......................................................................................25200.153030000
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCTG..........................................24200.153300000
.......................................................................................................................................................................................CGCTTCTGAACATTCACCGGGATCTG..........................................26160.132200000
...................................................................................................................................................................................TTGGCGCTTCTGAACATTCACCGGGA..............................................26160.132110000
....................................................................................................................................................................................TGGCGCTTCTGAACATTCACCGGGATC............................................27160.132200000
....................................................................................................................................................................................TGGCGCTTCTGAACATTCACCGGGA..............................................25160.132110000
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACCTCT..............................26170.122110000
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCACCG.................................................27180.112200000
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGAAC.........................................................25190.112100001
.............................................................................................................................................................................AATGGATTGGCGCTTCTGAACATTCACC..................................................28190.112020000
...........................................................................................................................................................................TGAATGGATTGGCGCTTCTGAACATT......................................................26190.112200000
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGA...........................................................23190.112200000
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGAAG......................................24200.102200000
.................................................................................................TTCGAGCGAACGGTCGTTCTCTACACTAC.............................................................................................................................29200.102200000
....................................................................................................................TCTACACTACGAAGATTGAAGACA...............................................................................................................24200.102200000
............................................CCAACGGTATACCGATTTCTTCAGA......................................................................................................................................................................................25200.102101000
.......................................................................................................................................................TAAGACTGGAGAGCAAAGATTGAATGG.........................................................................27200.102020000
.....................................................................TCGGTGCAACACTGCCAGTAACAG..............................................................................................................................................................24200.102110000
................................................................................................................................................TACGCAATAAGACTGGAGAGCA.....................................................................................22200.102200000
............................................................................................................................................................................................CTGAACATTCACCGGGATCTGGAAGT.....................................26200.102200000
...........................................................................................................................................................................................TCTGAACATTCACCGGGATCTGGAAG......................................26200.102100010
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAA...................................................................................24200.102200000
.................................AAACATTCTATCCAACGGTATACC..................................................................................................................................................................................................24200.102110000
...............................................................................................................................................TTACGCAATAAGACTGGAGAGCAAA...................................................................................25200.102110000
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAGAT................................................................................27200.102200000
............................................................TTCTTCAGATCGGTGCAACACTGCC......................................................................................................................................................................25200.102020000
.....................................................................................AGTAACAGTGGCTTCGAGCGA.................................................................................................................................................21200.102000002
................................................................................................................................................TACGCAATAAGACTGGAGAGCAAAG..................................................................................25200.102010010
......................................................................................................................................................................................GCGCTTCTGAACATTCACCGGGATCTG..........................................27160.061100000
.........................................................................................................................................................................................................GGGATCTGGAAGTAACCTCTGACGC.........................25160.061100000
.....................................................................................................................................................................................GGCGCTTCTGAACATTCACCGGGATCTG..........................................28160.061100000
...................................................................................................................................................................................TTGGCGCTTCTGAACATTCACCGGGG..............................................26160.061010000
.......................................................................................................................................................................................CGCTTCTGAACATTCACCGGGATC............................................24160.061010000
........................................................................................................................................................................................................CGGGATCTGGAAGTAACCTCTGACG..........................25160.061100000
..................................................................................................................................................................................ATTGGCGCTTCTGAACATTCACCGGGA..............................................27160.061100000
.....................................................................................................................................................................................................CACCGGGATCTGGAAGTAACCTCTGA............................26160.061100000
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACCTC...............................25170.061100000
....................................................................................................................................................................CAAAGATTGAATGGATTGGCG..................................................................21170.061000010
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCACCGG................................................28170.061010000
....................................................................................................................................................................................................TCACCGGGATCTGGAAGTAACCTCTG.............................26170.061100000
.................................................................................................................................................................................GATTGGCGCTTCTGAACATTCACCGG................................................26170.061100000
........................................................................................................................................................................GATTGAATGGATTGGCGCTTCTGAA..........................................................25180.061010000
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGAACAT.......................................................27190.051100000
..........CGAAGCTTTGGACGTTTGCGATGAA........................................................................................................................................................................................................................25190.051100000
..........................................................................................................................................................................TTGAATGGATTGGCGCTTCTG............................................................21190.051100000
.........TCGAAGCTTTGGACGTTTGCGATGAA........................................................................................................................................................................................................................26190.051100000
....ATTCATCGAAGCTTTGGACGTTTGC..............................................................................................................................................................................................................................25190.051000001
............................................................................................................................................................................GAATGGATTGGCGCTTCTGAACATT......................................................25190.051000010
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCTGAACATT......................................................28190.051100000
.AACATTCATCGAAGCTTTGGACG...................................................................................................................................................................................................................................23190.051100000
...CATTCATCGAAGCTTTGGACGTTTG...............................................................................................................................................................................................................................25190.051100000
...............................................................................................................................AAGATTGAAGACATATGG..........................................................................................................18200.051000100
.........................................................................TGCAACACTGCCAGTAACAGTGGC..........................................................................................................................................................24200.051010000
.................................................................CAGATCGGTGCAACACTGCCA.....................................................................................................................................................................21200.051000001
....................................................................................CAGTAACAGTGGCTTCGAGCGAACGGTC...........................................................................................................................................28200.051010000
...................................................................................................................CTCTACACTACGAAGATTGAAGACATA.............................................................................................................27200.051100000
........................................................................................................GAACGGTCGTTCTCTACACTACGAA..........................................................................................................................25200.051100000
...................................................................................................................................................................................................TTCACCGGGATCTGGAAGTAACC.................................23200.051010000
.................................................................................................................TTCTCTACACTACGAAGATTGAAC..................................................................................................................24200.051100000
............................................CCAACGGTATACCGATTTCTTCAG.......................................................................................................................................................................................24200.051100000
.................................................................................................................................................ACGCAATAAGACTGGAGAGCAAAGA.................................................................................25200.051100000
.....TTCATCGAAGCTTTGGACGTTTGCGA............................................................................................................................................................................................................................26200.051010000
..............................................................................................................................................................................ATGGATTGGCGCTTCTGAACATTCA....................................................25200.051001000
.............................................................................................................................................................................................................TCTGGAAGTAACCTCTGACGCAATATTG..................28200.051001000
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCTGGA........................................26200.051100000
.................................................................................................................................................ACGCAATAAGACTGGAGAGCAAAG..................................................................................24200.051100000
.................................................................................TGCCAGTAACAGTGGCTTCGAGCGAAC...............................................................................................................................................27200.051010000
...............................................................................ACTGCCAGTAACAGTGGCTTCGAGCG..................................................................................................................................................26200.051100000
.................................................................CAGATCGGTGCAACACTGCCAG....................................................................................................................................................................22200.051000100
................................................................................................................GTTCTCTACACTACGAAGATTGAAGACA...............................................................................................................28200.051100000
...............................................................................................................................................TTACGCAATAAGACTGGAGAGCAAAGAT................................................................................28200.051010000
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATC............................................22200.051100000
...........................................................................................................................................................................TGAATGGATTGGCGCTTC..............................................................18200.051100000
.........................................................................................................................................................AGACTGGAGAGCAAAGATTGAATG..........................................................................24200.051100000
..........................................................................................................................................................................................TTCTGAACATTCACCGGGATCTG..........................................23200.051100000
...............................................................................ACTGCCAGTAACAGTGGCTTCGAGC...................................................................................................................................................25200.051010000
............................................CCAACGGTATACCGATTTCTTCAGATC....................................................................................................................................................................................27200.051100000
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGAAGTAA...................................27200.051100000
................................................................................................................................................................AGAGCAAAGATTGAATGGATTGG....................................................................23200.051000100
..........................................................................................................................................................GACTGGAGAGCAAAGATTGAATGGAT.......................................................................26200.051000010
.............................................................TCTTCAGATCGGTGCAACACTGCCAGT...................................................................................................................................................................27200.051100000
...............................................................................................................................................................................................AACATTCACCGGGATCTGGAAGTAACC.................................27200.051010000
.................................................................................................................................................................................GATTGGCGCTTCTGAACATTCACC..................................................24200.051010000
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTC..............................................................20200.051100000
............................................CCAACGGTATACCGATTTCTTCAGT......................................................................................................................................................................................25200.051010000
......................................................................................................................TACACTACGAAGATTGAAGACATATT...........................................................................................................26200.051100000
............................................................................................................................................................................................CTGAACATTCACCGGGATCTGGAAG......................................25200.051100000
....................................................................................................................................................................................................TCACCGGGATCTGGAAGTAACCT................................23200.051100000
.........................................................................................................................................................................................................................CTCTGACGCAATATTGAGTATAATGGCCC.....29200.051100000
..................................................................................GCCAGTAACAGTGGCTTCGAGCGAACGG.............................................................................................................................................28200.051010000
......................................................................................................................TACACTACGAAGATTGAAGACATA.............................................................................................................24200.051100000
...................................................................................................................CTCTACACTACGAAGATTGAAGACA...............................................................................................................25200.051010000
.........................................................................................................................................................................................CTTCTGAACATTCACCGGGATCT...........................................23200.051100000
........................................................................................................................................................AAGACTGGAGAGCAAAGAT................................................................................19200.051100000
...........................................................................................................................................................................................TCTGAACATTCACCGGGATCTGGAAGT.....................................27200.051100000
........................................................................................................................................................AAGACTGGAGAGCAAAGATTGAATGG.........................................................................26200.051000010
.........................................................................................................................................................................ATTGAATGGATTGGCGCTTCT.............................................................21200.051100000
......TCATCGAAGCTTTGGACGTTTGCGA............................................................................................................................................................................................................................25200.051100000
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGA........................................22200.051100000
.............................................................................................................................................................................................TGAACATTCACCGGGATCTGGAAGTAAC..................................28200.051010000
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCA....................................................24200.051100000
............................................................................................GTGGCTTCGAGCGAACGGTCGTTC.......................................................................................................................................24200.051100000
................................................................TCAGATCGGTGCAACACTGCCAGT...................................................................................................................................................................24200.051000010
...............................................................................................................................................TTACGCAATAAGACTGGAGAGCAA....................................................................................24200.051100000
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACA........................................................20200.051100000
.........................................TATCCAACGGTATACCGATTTCTTCAGA......................................................................................................................................................................................28200.051100000
.....................................................................TCGGTGCAACACTGCCAGTAACAGT.............................................................................................................................................................25200.051010000
........................................................................................................................CACTACGAAGATTGAAGACATATT...........................................................................................................24200.051100000
...............................................................TTCAGATCGGTGCAACACTGCCAGT...................................................................................................................................................................25200.051001000
...................................................................................CCAGTAACAGTGGCTTCGAGCGAACGG.............................................................................................................................................27200.051100000
...............................................................................................................................................................................TGGATTGGCGCTTCTGAACATTCAC...................................................25200.051010000
.......................................................................................TAACAGTGGCTTCGAGCGAACGGTCG..........................................................................................................................................26200.051000010
................................................................................................................................................................................................................................GCAATATTGAGTATAATGGCCC.....22200.051010000
..............................................................................................................................................................GGAGAGCAAAGATTGAATGGATT......................................................................23200.051010000
...................................................................................................................CTCTACACTACGAAGATTGAAGACAT..............................................................................................................26200.051100000
............................................................................................................................................TATTTACGCAATAAGACTGGAGAGCA.....................................................................................26200.051010000
.................................................................................TGCCAGTAACAGTGGCTTCGAGCGT.................................................................................................................................................25200.051100000
..........CGAAGCTTTGGACGTTTGCGATG..........................................................................................................................................................................................................................23200.051100000
............................................................TTCTTCAGATCGGTGCAACACTGCCAGT...................................................................................................................................................................28200.051100000
..........CGAAGCTTTGGACGTTTGCGA............................................................................................................................................................................................................................21200.051100000
..............................................................CTTCAGATCGGTGCAACACTGCCAGT...................................................................................................................................................................26200.051100000
....................................................................................................................TCTACACTACGAAGATTGAAGACAA..............................................................................................................25200.051100000
..............................................................................................................TCGTTCTCTACACTACGAAGATTGAA...................................................................................................................26200.051100000
............................................................................................................................................................................................................................TGACGCAATATTGAGTATAATGG........23200.051010000
...................................................................................................................................TTGAAGACATATTTACGCAATAAGA...............................................................................................25200.051010000
..........................................................................................................................................................................................TTCTGAACATTCACCGGGATCTGG.........................................24200.051100000
droBip1
GAACGATCATATTCGACT--------------------------------------------------------------------------------------------------------TTGAGGAGAATGAACGATTATTTGAGAAACACGAAGGGTCAAGAGCGTCTCAATGGTCTTTCATCTTTGAATATTCACCATCGCATAACTTTGACTGAAGACCAAATTCTCAGAAAGATTTTTGAAAAGSizeHit CountTotal NormTotal
No Reads
droFic1
AATCATTTATTGAAGCTCTGGACGTTTGCAATAAAAGATTAAACACCCAAATATACAGGCTTCTTCAAATTTGTGGGACACTACCGGTCACAGTTGCCTCTAGTGAACGGTCCTTCTCCACTTTGCGAAGATTAAAAACTTACTTGCGCAATCGGACTGGAGAGGAACGGCTGAACGGACTGGCGCTTCTGAACATTCACAGAGATGTGAATGTTACTAGTGATCAAATTCTGGATATCCTCGCAAAAAGASizeHit CountTotal NormTotal
No Reads
droRho1
AAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droWil2
ACACGTTCATTGATGCATTGAATCATTGTTGCGAGTCTTTTTACCCCACGGTTCATCGGTATTTGCAAATTGCTGCGACGCTTCCAGTCTCTGTTGCTCCGAGCGAACGCTCTTTTTCTTCACTAAGGAGGCTGAAAACGTACCTAAGAAGTACAATGGGTCAAGAGAGGTTAAACGGACTAGCTTTGCTCAACATCCACTCTAAAATTGAAGTCACTCCAGAGGATATTTTGAACGAAATGGCGAAAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................GTCTCTGTTGCTCCGAGCGAACG..............................................................................................................................................2341.75707000
.........................................................GGTATTTGCAAATTGCTGCGACGC..........................................................................................................................................................................2441.00404000
...................................TCTTTTTACCCCACGGTTCATCGGTATT............................................................................................................................................................................................2820.50100010
......................................................................................GTCTCTGTTGCTCCGAGCGAAC...............................................................................................................................................2240.50202000
......................................................................................GTCTCTGTTGCTCCGAGCGAACGC.............................................................................................................................................2440.50202000
.........................................................GGTATTTGCAAATTGCTGCGACG...........................................................................................................................................................................2340.50202000
..........................TGTTGCGAGTCTTTTTACCCCACGGT.......................................................................................................................................................................................................2620.50100010
......................................................................................GTCTCTGTTGCTCCGAGCGAACGCTCT..........................................................................................................................................2740.50202000
...............CATTGAATCATTGTTGCGAGTCT.....................................................................................................................................................................................................................2350.40202000
..................................................................................................................................................................................ACTAGCTTTGCTCAACATCCACTC.................................................2430.33101000
....................................................................................................................................TGAAAACGTACCTAAGAAGTACAATGGGT..........................................................................................2930.33101000
..............................................................................................................................................................................ACGGACTAGCTTTGCTCAACATCCAC...................................................2630.33101000
.................................................................................TTCCAGTCTCTGTTGCTCCGA.....................................................................................................................................................2130.33101000
..........................................................................................................................................................................................................TAAAATTGAAGTCACTCCAGAGGA.........................2430.33100010
........................................................................................................................CACTAAGGAGGCTGAAAACGTACC...........................................................................................................2430.33101000
...................................................................................................................................................................AGAGAGGTTAAACGGACTAGCTTT................................................................2430.33101000
.........................................................................TGCGACGCTTCCAGTCTCTGTTGCTC........................................................................................................................................................2630.33101000
..................................................................................................................................................................................ACTAGCTTTGCTCAACATCCACTCTAAA.............................................2830.33101000
..........................................................................................................................................................................................................TAAAATTGAAGTCACTCCAGAGGC.........................2430.33100010
........................................................................................................................................................................................................TCTAAAATTGAAGTCACTCCAGAGG..........................2530.33101000
.............................................CCACGGTTCATCGGTATTTGC.........................................................................................................................................................................................2130.33101000
.........................................................................................................................................................................................................CTAAAATTGAAGTCACTCCAGAGG..........................2430.33101000
............................................................................................................................................................TGGGTCAAGAGAGGTTAAACGGACT......................................................................2530.33101000
..............................................................................................................................................................................................................................AGGATATTTTGAACGAAATGGCG......2330.33101000
.................................................................................................................................................................................................................GAAGTCACTCCAGAGGATATTT....................2230.33101000
..................................................................................................................................................................................ACTAGCTTTGCTCAACATCCACA..................................................2340.25101000
.................................................................................................................................................AAGAAGTACAATGGGTCAAGA.....................................................................................2140.25101000
........................................................................................CTCTGTTGCTCCGAGCGAACGCTCT..........................................................................................................................................2540.25101000
...........................................................................................................................................................................TAAACGGACTAGCTTTGCTCAACATCC.....................................................2740.25101000
.................................................................................................................................................AAGAAGTACAATGGGTCAAGAG....................................................................................2240.25101000
................................................................................................................................................TAAGAAGTACAATGGGTCAAGAGAGG.................................................................................2640.25100010
............................................................................................................................................................................AAACGGACTAGCTTTGCTCAACAT.......................................................2440.25101000
...................................................................................................................TTCTTCACTAAGGAGGCTGAAAACG...............................................................................................................2540.25101000
..........................................................................................................................................................AATGGGTCAAGAGAGGTTAAAC...........................................................................2240.25100100
................................................................................................................................................TAAGAAGTACAATGGGTCAAGAGAGGT................................................................................2740.25100010
..........................................................................................CTGTTGCTCCGAGCGAACGCT............................................................................................................................................2140.25101000
..................TGAATCATTGTTGCGAGTCTTTTTAC...............................................................................................................................................................................................................2650.20100010
...............................................................................................GCTCCGAGCGAACGCTGGC.........................................................................................................................................19110.09100001
droMoj3
ACACGTTCATTGATGCATTGAATCATTGTTGCGAGTGTTTTTACCCCACGGTTCATCGGTATTTGCAAATTGCTGCGACGCTTCCAGTCTCTGTTGCTCCGAGCGAACGCTCTTTTTCTTCACTAAGGAGGCTGAAAACGTACCTAAGAAGTACAATGGGTCAAGAGAGGGTAAACGGACTAGCTTTGCTCAACATCCACTCTAAAATTGAAGTCACTCCAGAGGATATTTTGAACGAAATGGCGAAAACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................TTCTTCACTAAGGAGGCTGAAAACG...............................................................................................................2540.251100000
.........................................................GGTATTTGCAAATTGCTGCGACGCT.........................................................................................................................................................................2550.201100000

Generated: 05/18/2015 at 05:36 AM