ID:

dan_2810

 Coordinate:

scaffold_13339:2216850-2217000 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.7 -8.4 -8.4

Flybase annnotation

intron [Dana\GF13971-in]; CDS [Dana\GF13971-cds]; exon [dana_GLEANR_14529:2]; intron [Dana\GF13971-in]

Repeatable elements

NameClassFamilyStrand
Hoana1DNAhAT-hobo+
Helitron-2_DVirRCHelitron-
mature
  1. scaffold_9661:4057-4077 -
  2. scaffold_12671:43769-43789 -
  3. scaffold_12911:1699908-1699928 -
  4. scaffold_12913:135131-135151 -
  5. scaffold_12928:478349-478369 -
  6. scaffold_13034:663157-663177 -
  7. scaffold_13077:121773-121793 -
  8. scaffold_13082:3829044-3829064 -
  9. scaffold_13099:1708720-1708740 -
  10. scaffold_13099:1905962-1905982 -
  11. scaffold_13230:2738080-2738100 -
  12. scaffold_13250:485080-485100 -
  13. scaffold_13333:815672-815692 -
  14. scaffold_13339:876241-876261 -
  15. scaffold_13339:877142-877162 -
  16. scaffold_13339:1917656-1917676 -
  17. scaffold_13339:2679970-2679990 -
  18. scaffold_13499:829343-829363 -
  19. scaffold_13499:840671-840691 -
  20. scaffold_13499:953599-953619 -
  21. scaffold_3985:5419-5439 +
  22. scaffold_9742:4935-4955 +
  23. scaffold_11590:33487-33507 +
  24. scaffold_12671:140425-140445 +
  25. scaffold_13045:338788-338808 +
  26. scaffold_13045:1110526-1110546 +
  27. scaffold_13077:204836-204856 +
  28. scaffold_13111:1341203-1341223 +
  29. scaffold_13168:40395-40415 +
  30. scaffold_13230:2650616-2650636 +
  31. scaffold_13230:3180760-3180780 +
  32. scaffold_13248:3986120-3986140 +
  33. scaffold_13266:15919927-15919947 +
  34. scaffold_13266:19806195-19806215 +
  35. dan_2810  scaffold_13339:2216854-2216874 +
  36. scaffold_13340:1899774-1899794 +
  37. scaffold_13417:4016797-4016817 +
  38. scaffold_13499:378172-378192 +
  39. scaffold_13499:381667-381687 +
  40. scaffold_13499:388065-388085 +
  41. scaffold_3708:2840-2860 +
  42. scaffold_9424:22-42 +
  43. scaffold_12605:14873-14893 +
  44. scaffold_12911:1837336-1837356 +
  45. scaffold_12916:15584632-15584652 +
  46. scaffold_12943:1042214-1042234 +
  47. scaffold_12947:512729-512749 +
  48. scaffold_13034:1081163-1081183 +
  49. scaffold_13079:136979-136999 +
  50. scaffold_13082:983107-983127 +
  51. scaffold_13082:987028-987048 +
  52. scaffold_13089:54962-54982 +
  53. scaffold_13099:614824-614844 +
  54. scaffold_13099:2675731-2675751 +
  55. scaffold_13165:399385-399405 +
  56. scaffold_13258:1346649-1346669 +
  57. scaffold_13266:18701294-18701314 +
  58. scaffold_13272:301249-301269 +
  59. scaffold_13339:4112430-4112450 +
  60. scaffold_13767:1078422-1078442 +
  61. scaffold_343:1523-1543 -
  62. scaffold_3860:155-175 -
  63. scaffold_9013:791-811 -
  64. scaffold_12671:27186-27206 -
  65. scaffold_12671:174004-174024 -
  66. scaffold_12911:1493805-1493825 -
  67. scaffold_13089:218832-218852 -
  68. scaffold_13099:596665-596685 -
  69. scaffold_13099:615776-615796 -
  70. scaffold_13099:1044510-1044530 -
  71. scaffold_13165:220594-220614 -
  72. scaffold_13165:262572-262592 -
  73. scaffold_13250:718793-718813 -
  74. scaffold_13260:1802939-1802959 -
  75. dan_1787  scaffold_13266:4888532-4888552 -
  76. scaffold_13276:50582-50602 -
  77. scaffold_13337:21668935-21668955 -
  78. scaffold_13339:4257632-4257652 -
  79. scaffold_13340:3492277-3492297 -
  80. scaffold_13340:18018479-18018499 -
  81. scaffold_298:1096-1116 +
  82. scaffold_9025:674-694 +
  83. scaffold_10513:124215-124235 +
  84. scaffold_10764:515-535 +
  85. scaffold_12911:1613965-1613985 +
  86. scaffold_13034:787861-787881 +
  87. scaffold_13043:467394-467414 +
  88. scaffold_13043:504194-504214 +
  89. scaffold_13099:222935-222955 +
  90. scaffold_13111:43521-43541 +
  91. scaffold_13165:79880-79900 +
  92. scaffold_13230:3524132-3524152 +
  93. scaffold_13250:1354475-1354495 +
  94. scaffold_13258:189681-189701 +
  95. scaffold_13260:2090110-2090130 +
  96. dan_3145  scaffold_13340:17500077-17500097 +
  97. scaffold_13417:5127953-5127973 +
  98. scaffold_13417:6771602-6771622 +
  99. scaffold_13744:203402-203422 +
  100. scaffold_13767:1523155-1523175 +
  101. scaffold_8908:640-660 -
  102. scaffold_9339:8122-8142 -
  103. scaffold_10149:2098-2118 -
  104. scaffold_10675:900-920 -
  105. scaffold_13248:407517-407537 -
  106. scaffold_13248:2315537-2315557 -
  107. scaffold_13248:3062046-3062066 -
  108. scaffold_13248:3902176-3902196 -
  109. scaffold_13266:2901054-2901074 -
  110. scaffold_13266:18034860-18034880 -
  111. scaffold_13337:5371050-5371070 -
  112. scaffold_13337:7208493-7208513 -
  113. scaffold_13337:15853493-15853513 -
  114. scaffold_13337:21483616-21483636 -
  115. scaffold_13340:1653013-1653033 -
  116. scaffold_13340:13984266-13984286 -
  117. scaffold_13340:14663143-14663163 -
  118. scaffold_13417:258036-258056 -
  119. scaffold_13417:5258302-5258322 -
  120. scaffold_13499:546151-546171 -
star
  1. scaffold_3813:9948-9975 +
  2. scaffold_10691:7184-7211 +
  3. scaffold_12911:189948-189975 +
  4. scaffold_12947:227702-227729 +
  5. scaffold_12984:342797-342824 +
  6. scaffold_12984:651176-651203 +
  7. scaffold_13034:532201-532228 +
  8. scaffold_13070:41357-41384 +
  9. scaffold_13070:71536-71563 +
  10. scaffold_13077:288139-288166 +
  11. scaffold_13079:734297-734324 +
  12. scaffold_13099:1464222-1464249 +
  13. scaffold_13228:163606-163633 +
  14. scaffold_13239:145284-145311 +
  15. scaffold_13250:1823420-1823447 +
  16. scaffold_13260:85537-85564 +
  17. scaffold_13260:636324-636351 +
  18. scaffold_13266:19408644-19408671 +
  19. scaffold_13417:3238507-3238534 +
  20. scaffold_13499:401596-401623 +
  21. scaffold_66:1234-1261 +
  22. scaffold_126:1798-1825 +
  23. scaffold_9399:263-290 +
  24. scaffold_9742:4969-4996 +
  25. scaffold_12671:140459-140486 +
  26. scaffold_12947:745414-745441 +
  27. scaffold_12966:96774-96801 +
  28. scaffold_13045:1110560-1110587 +
  29. scaffold_13111:1341237-1341264 +
  30. scaffold_13168:40429-40456 +
  31. scaffold_13230:2650650-2650677 +
  32. scaffold_13230:3180794-3180821 +
  33. scaffold_13239:98150-98177 +
  34. scaffold_13248:3986154-3986181 +
  35. scaffold_13266:15919961-15919988 +
  36. scaffold_13266:19806229-19806256 +
  37. dan_2810  scaffold_13339:2216888-2216915 +
  38. scaffold_13340:1899808-1899835 +
  39. scaffold_13417:2581256-2581283 +
  40. scaffold_13417:4016831-4016858 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################----------------
CGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTTTGACCAAAATTATAATACCCTCTGCAAGGGTATAATGATCTATATGCTTATAAAAACTTTAATATTTTAATAGTGTTATATTTTTATTGCTTTTATTTATTTTCAGTCTGACGCAGAATACGACAAAGAGCAACTTAGAAGTATATTAATTGGCAA
******************************************************.....((((((((.(((.................))).))))))))................*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 V106
head
 M058
embryo
 V055
head
 V039
embryo
...............................................................................................................................................................................................................GCAGAATACGACAAAGAGCA........................ 20 0 1 3.00 3 0 3 0 0 0 0
..........................................................................................................................................................................................................CTGACGCAGAATACGACAAAGAGCA........................ 25 0 1 2.00 2 1 1 0 0 0 0
.........................................................................................................................................................................................................................ACAAAGAGCAACTTAGAATTCT............ 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................TACGACAAAGAGCAACTTAG.................. 20 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................GTCTGACGCAGAATACGACAAAGAGCA........................ 27 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................ACGACAAAGAGCAACTTAG.................. 19 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................CGACAAAGAGCAACTTAGAAT............... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TGACGCAGAATACGACAAAGAGCA........................ 24 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................GAATACGACAAAGAGCAACTTA................... 22 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................................................GAATACGACAAAGAGCAACT..................... 20 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................ATACGACAAAGAGCAACTTAGAA................ 23 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................GACAAAGAGCAACTTAGAATTCT............ 23 2 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................TATGTCTGACGCAGAATACGACA............................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................GTCTGACGGAGAATACGACAAAGA........................... 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TGACGCAGAATACGACAAAGAGCAAC...................... 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................AATACGACAAAGAGCAACTTAG.................. 22 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................GACGCAGAATACGACAAAGAGCAAC...................... 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................ACAAAGAGCAACTTAGAATTC............. 21 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................GACGCAGAATACGACAAAGAGCAACT..................... 26 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................TGACGCAGAATTCGACCA.............................. 18 2 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................................................CAGAATACGACAAAGAGCAACTTAG.................. 25 0 1 1.00 1 1 0 0 0 0 0
......................................................TATAGGGTCGGAGATGTCTCC................................................................................................................................................................................ 21 0 20 0.40 8 0 0 0 8 0 0
.....................................................................................................................................................................................................TCAGTCAGGCGCAGAATGCGA................................. 21 3 3 0.33 1 0 0 0 0 1 0
....CATGCTCATATCAACTCAGGAGGT............................................................................................................................................................................................................................... 24 0 20 0.30 6 1 0 0 5 0 0
.............................................................................................................................................................................................................................AGAGCAACTTCGGAGTATAG.......... 20 3 4 0.25 1 0 0 0 0 1 0
..................................................ACTTTATAGGGTCGGAGATG..................................................................................................................................................................................... 20 0 20 0.20 4 4 0 0 0 0 0
.............................................................................................................................................................TATTTTAATGGGGTTATATT.......................................................................... 20 2 6 0.17 1 0 0 0 0 1 0
..............TCAACTCAGGAGGTGATCC.......................................................................................................................................................................................................................... 19 0 20 0.15 3 0 0 0 3 0 0
........................................................................................ACACTTTTGACCAAAATTATAATACCCT....................................................................................................................................... 28 0 20 0.15 3 0 0 0 3 0 0
..GACATGCTCATATCAACTCAGGAGG................................................................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................ACCAAAATTATAATACCCTCTGC................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................................................................................................GACAAGGAGCAACTTATAACT.............. 21 3 10 0.10 1 0 0 0 1 0 0
.........................................................................CCTTCACTGCGTTGCACACTTTTGAC........................................................................................................................................................ 26 0 20 0.10 2 0 0 0 0 0 2
..GACATGCTCATATCAACTCAGGAG................................................................................................................................................................................................................................. 24 0 20 0.10 2 0 0 0 0 0 2
.......................................................................................................................................................................................GCATTTATGTATTTTCAGT................................................. 19 2 12 0.08 1 0 0 0 1 0 0
..........................................................................CTTCACTGCGTTGCACACTTTTGA......................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 1
.................................................................................................ACCAAAATTATAATACCCTCTGCAAGGG.............................................................................................................................. 28 0 20 0.05 1 0 0 0 1 0 0
..............................................ATATACTTTATAGGGTCGGAGATG..................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 1
....CATGCTCATATCAACTCAGGAGGTGA............................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
......TGCTCATATCAACTCAGGAGGTGATC........................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
....................................................................................TTGCACACTTTTGACCAAAATTA................................................................................................................................................ 23 0 20 0.05 1 0 0 0 1 0 0
....CATGCTCATATCAACTCAGGAGG................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
.GGACATGCTCATATCAACTCAGG................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
......TGCTCATATCAACTCAGGAGGTGATCC.......................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

GCCTGTACGAGTATAGTTGAGTCCTCCACTAGGACTAGTTCTTATATATATGAAATATCCCAGCCTCTACAGAGGAAGTGACGCAACGTGTGAAAACTGGTTTTAATATTATGGGAGACGTTCCCATATTACTAGATATACGAATATTTTTGAAATTATAAAATTATCACAATATAAAAATAACGAAAATAAATAAAAGTCAGACTGCGTCTTATGCTGTTTCTCGTTGAATCTTCATATAATTAACCGTT
***************************************************************************************************************************************.....((((((((.(((.................))).))))))))................****************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 V039
embryo
 V055
head
................................................................................ACGCAACGTGTGAAAACTGGT...................................................................................................................................................... 21 0 20 0.80 16 16 0 0 0
...............................................................................GACGCAACGTGTGAAAACTGGTTTT................................................................................................................................................... 25 0 20 0.60 12 0 12 0 0
.............................................................................................................................................................ATAGAATTCTCACAGTATAAA......................................................................... 21 3 6 0.17 1 0 0 1 0
....................................................................ACAGAGGAAGTGACGCAACGTGTG............................................................................................................................................................... 24 0 20 0.15 3 0 0 3 0
.......................................................................................................................................................................................................TCAGCCTGCGTCTTAGGGT................................. 19 3 19 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13339:2216800-2217050 + dan_2810 CGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAATGA-----------TCTA-TA---------T--G--------------------------------C-------------------------------------TTATAAAAACTTTA-----------------ATATTTTAATAGTGTTATATTTTTAT-------------------------------------TGCTTTTATTT------------------------------------------------A-TTTTCAGTC-----T------------------------------------------------------------GACGCAGAATACGACAA-AGAGC--------------A---------ACT---TAGAAGTAT----------------ATTAATT---GGCAA
droBip1 scf7180000393577:37541-37791 + CGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCTTTCACTGCGTTGCACACTTT-------TGGACAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------TTTA-AAA-------ATACA---------AATTTTTG-------------------------------------------------------------------------------------------------------------ACTTATATAAATTTTTT-------TTT------------------------ATTTTAATTGTTT------------------------AATTAATAA--ATTA-----------------AA------------------------------------------------TACAAAAGCAAAA------------AC----------AAACGAAA--------------AA-----AGAAATTTA--ATTA-AATATCT---GGCGA
droKik1 scf7180000302388:537433-537663 + CGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCT----------GC-----A-------AGGGTA---------------------------TAAAAA-----------TGGG-AAAAACCAAAT---TAA---------------------TT-----------------------------------------------------------T---------------------------------------------TTTTATTAATATT-------TTTATTTTA------------AT------------------------------------------------GTA-TTTT-----------------CTTGAA------------------------------------------------AACAAAGAATTTGACAA-ATATC--------------A---------ACT---T--AT----------------TAATAAA---A---AAAAA
droFic1 scf7180000453848:6235-6469 + CGTACATACATATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATATACTTTATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCTTTTGCTCT--GC-----A-------AGGGTA---------------------------TAAAAA-----------TACC-A-G------TA--TG------CTGTTTTC-----------------------------------------------------------------------------------------------------------------------TATTAGTGTG-------CTAATTTTA--------------------------------GTT----------------------------TG---TA-----------------AC------------------------------------------------TATAAACA-------TGTGA-----GC----------AAAAAGTA--------------AG-----AACAATTTG--ATTG-TGAAATT---AAAAA
droEle1 scf7180000491215:278047-278292 + CGGACATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------ACAA-GA------------G------CTTT----------------------T-------------------------------------AAATA----ATTTA-----------------TAAT-------GTGACATAATT--------TTT------------------------------TGTCCTCATCTAT----TA-------------------------------AAGCATTACATTCTT-----------------CT------------------------------------------------CATAAACA-------AGAAAA-AGAAC--------------A-----------G---TA-AGCTAA----------------AATAAGT---GGTAA
droRho1 scf7180000769942:493-743 - CGGACATGGCTATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------TTCAAGT------------A------CTGTTTTTTAA---A--TT-CA-AATT-------------------------------------TGATAATAA-TTTA-----------------TA-----------------------------------------------ATTAACCTTTTC--AGTT--CATGT----------------------------ATGTAAAATATAT-----G-------C---A-----A----------GT----------------------------------------------------------TTTAAAA-AGAGC--------------A-----------T---TAGATATAT----------------ATTAATA---AAAAG
droBia1 scf7180000302402:2212507-2212761 - CGGACATGGCTAGATCGACTCGTCTTGTGACGCTAATCAAGAATATATA-ACTTTATGGGGTCGGAAACGTCTGCTTCACCGCGTTGCAAACTTC-------TGACTGAAATCATTATAACCTCT--------GC-----A-------AGGGTA---------------------------TAAAAATAATGTATTATTTAG-GAA------TA--AG------CTGATCATACAATA-AAT---AAG--CTCATAGATCCTACAAATATTTTCATTAAGAAGCATTTAAATA----TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGAA-AAAGG--------------T---------TTT---TAGATGTAA----------------TATAATT---TGCAT
droTak1 scf7180000415874:278750-279011 - CGGACATGGCTATATCGACTCCCCTATTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTCCTTCACTGCGTTACAAACTTC-------TGACCAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------TATA-TAAT----------AAATATATCGAATA------------------------------------------------------------------CAATATAAATTTTTTAATTTTT---------------------------------------------------C----ATTTT--AGA------------------------------CTTCGACAT----------T--TTG------------TATCTTCAATATTTTGTATGA-----------------------------------------TATT---AAAGT----------ACAGC--------------A---------ACTTTTTAAAAATA----------------ATAAAAGT---GACAA
droEug1 scf7180000408974:22954-23191 + CGGACATGGCTATATCGACTCCCGTATTGATCGTGATCAAGAATATATATTTTTTAT-GGGTCGGAAACGTCTCCTTCACTGCGTTACAAACTTT-------TGACCAAAATTATAAAACCCTCT--------GC-----A-------AGGGTTTCCTTATTTTCCTATATGTAACCAATTTAATTA-----------TTAA-ACA------GC--AG------CTT-------------------------------------------------------------------------------------------------------------------------------TAGTATA-------TA-------------------------------GTTGTCTGATT----------------------------------------------------------------------------------------------------------GGCAAGAACTATTACCC-TGAGC--------------A---------AGG---T--AT----------------ACATAAATAAA---TTAGA
dm3 chrU:1242006-1242248 + CGGACATGGCCAGATCGACTCAGCTATTGATCCTGATCAAGAATATATATACATCAAATAGTCGGAAACATTTACTTCTGCCTGTTACATACTTT-------TCAACTAATTTAGTATACCCTTTTACTCT--ACTAGTAT-------CGGGTA---------------------------TAACAA-----------GAGA-GAAT----------GCTAAAGTCGAGTTA------A--AT-CT-ATTT-------------------------------------TGATATGAA------------------------------------------------------TATTAA-------------------AGTTATTGTTTGTATGT------------------------------------------------A-TTTC---------------------AA-----------------------------------------------ATCAAAAGAGTATAACAATAAAGC--------------A---------G-------------------------------------------CT
droSim2 3l:22514025-22514240 + CGGACAGGGCCAGATCGACTGGGCGATTGATACTGATCAAAAATATATATACTTTATATGGTCGGAAATTCTTCCTTCCATCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTACCCT--ATGAGTAA-------CGAGTA---------------------------TAAAAA-----------TCGA-AA------------G------CCGTTTTATAA---A--TTTCG-ATTT-------------------------------------TGTTA---------------------------------------------------------------------------------------------------------------------TT-------------------------TTT------------GAATTT----------------------------------------------------------------CAGGATA---CAG-AAAGC--------------A-----------T---T-GAAGTA----------------------------AATT
droSec2 scaffold_11:2858675-2858896 + CGGACATGGCTAGATCTACTTGGCTATTGATACTGATCGAGAATATATATATTTTATATGGTCGGAAGCGCTTCCTTCTGCCTGTTACATACTTT-------TCAACAAATCTAGAATACCCTAT--------TA-----A-------CGGGTA---------------------------TGAAAA-----------GTAT-AA-T----------AAA---------------------TA-----------------------------------------------------------T---------------------------------------------AAATATTAATA--ATTGATAATTATTTTGGTTATTGATTTTGAGA----------------------------------------------------------A-----C----------GG---TTCAAAAAAAGAAAACCTTT-------------------------------------------AAAA------------------------------------------------------------------CAGAT
droYak3 2R:910944-911172 - CGGACATGGCCAGATCGACTCGGCTGTTGATCCTGATCAAGAAAATATATACATTGTATGGTCGGAA-GGCTTCCTTCGGCCTGTTACATACTTT-------TCCTCAAAT-----ATT-CCTCA---------------A-------ATAAAA---------------------------TGGACA-----------TCTA-AG---------T--GAA---------------------TT-----------------------------------------------------------T---------------------------------------------AAAATTTTTAA--ATTTAATATTGTTTATTTAACTGCTTTTATGTTT----TA-------------------------------AT-----G-------CAGTT-----T---TATCCTGAACGC-----------------------------------------CATC-------------------------------------------------------GACGTAG--------GCTAA---CA----C---AACAA
droEre2 scaffold_4929:15084395-15084624 + CGGACATGGCCAGATCGACTCGGCTATTGATCCTGCTTAAGAATATATAAA-----------CGGAAACGTCTCCTTTG-CCTGTTACATACTTT-------TAAACGAAAGTAGTATACCCTTTTATCCT--ACGAGTAA-------CGGGTA---------------------------TAATTA-----------CAAA-AT------------A---------------------ATT---AAA--T------------------------------------------------TT-------AAAAAATTTTCTAAA-------TTTGAATGATT--------TTT------------------------------AGAT-----------------------------------------------------------------C-----T------------------------------------------------------------TACG------T------------------CAGAATTACGCCAGAAACATT---TAGAGGTAT----------------GCTACTT---CAAAA
dp5 Unknown_group_465:10393-10634 + CAGACAGTGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGATGTTACACACATCCATTTTCACCACAAATCTAATATACCCCAATACTCATTTTGAGTAT-------CGGGTA---------------------------TAAAAA-----------TTAA-AAA------TA--GG------CTGTATTTTTA-------------------------------------------------------------------------------------------------------------ATAGATATATTAGTATA-------TCT------------------------ATTG--------TGATT-------------------------------------------------------------------------------------------------------------GGAGAATAGAAAAA-AAAA---------------------------A---T--AT----------------ATATAAAAATT---TATGA
droPer2 scaffold_107:33109-33350 + CAGACAGTGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGGTTCCTTCTGGACGTTACACACATCCATTTTCACCACAAATCTAATATACCCCAATACTCATTTTGAGTAT-------CGGGTA---------------------------TAAAAA-----------TTAA-AAA------TA--GG------CTGTATTTTTA-------------------------------------------------------------------------------------------------------------ATAGATATATTAGTATA-------TCT------------------------TTTG--------TGATT-------------------------------------------------------------------------------------------------------------GGAGAATAGGAAAA-AAAAA--------------A------------------AT----------------ATATAAAAATT---TATGA
droWil2 scf2_1100000004760:13330-13585 - CGGACATGGCTATATCAACTCAGCTTCTCATGCTGATCAAGAATATATATACTTTATCGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACATC-------TGACCAATTTTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAATAAACATTT---------------------------------------------------GT-ATTT-------------------------------------TGATATTAAATTTA-----------------AAATTTAACTTGAACTTGACATTTAATGC-------------------------------------------------------------------------GTG---------------------------------------------------------------------------------------------------------ATATTATATATCATCATTCACATTAAGTGAGATGAGTGT---T----------TT----ATAATTATAAGAAATTAATTCAA
droVir3 scaffold_12967:101335-101573 + CGGACATGGCTATATCGACTCGGCTGTTGATGCTGATTAAGAATATATATACTTTATGGGGTCGGAGATGTCTCCTTCTATGCGTTACACATTTC-------ACGACAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAATATAAATA-----CTTA-ATA------GT-AGA---------TTTCTTTA---------------------------------------------------------------------------------------------------------------AGTTTTAGTAGTATT-------TTT------GTT----------------------------------------------------AATTATTGTAGATTG-----------------CT------------------------------------------------TACCTACGCAGAATATGACAA-CAAAA--------------A---------------------TA-------------AAATATA---A---ATATA
droMoj3 scaffold_6473:8405432-8405706 + CGGACAGGGCTATATCAACTCAGCTCGTCGCGCTGATCAAGAATATATATACTTTATGGGGTCTGCCACGCCTCCTTCTGCCCGTTACATACTTT-------TTCACAAAACCATTATACCCTGATTTCCC--ATTTTCAATGGGTTCAGGGTA---------------------------TAGAAAAAATGT--------A-TA---------T------------A----------------------C-------------------------------------AAATA----TATAATAAATTAAACAATTTTC---------------------------------------------------C------------------------ATCG--------TGCTTAAAATTAGCAAA----------TTATTTTA-TTTT---------------------------------------------------------------------------CAGAATA------------------CAAAATTATTGTATAAATAAT---T----------AT----ACAAATATATAAATT---TAAAA
droGri2 scaffold_14906:9846285-9846522 + TGGACATAGCTATATCGACTCGGTTGTTGATCATGATCAAGAATATATATACTTTATGGGGTCGAAGATGCTTCCTTTTGCCTGTTACAAGCATT-------TGCACAAAACCATTATACTCTTTTTAGCC--ATTTTTAATGGTTTCGGGGTA---------------------------TAATTA-----------GAAC-AAA-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAAACTATGACACAGTTTTATTTATTATATATATACGAATAATAATACAA-TGAAT--------------A-----------G---T--AT----------------AAGTTAGAGTA---TTAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAATGA-----------TCTA-TA---------T--G--------------------------------C-------------------------------------TTATAAAAACTTTA-----------------ATATTTTAATAGTGTTATATTTTTAT-------------------------------------TGCTTTTATTT------------------------------------------------A-TTTTCAGTC-----T------------------------------------------------------------GACGCAGAATACGACAA-AGAGC--------------A---------ACT---TAGAAGTAT----------------ATTAATT---GGCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATACGACAA-AGAGC--------------A---------..............................................2013.003000030
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----T------------------------------------------------------------GACGCAGAATACGACAA-AGAGC--------------A---------..............................................2512.002100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAA-AGAGC--------------A---------ACT---TAG.....................................2011.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-----T------------------------------------------------------------GACGCAGAATACGACAA-AGAGC--------------A---------..............................................2711.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAA-AGAGC--------------A---------ACT---TAG.....................................1911.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAA-AGAGC--------------A---------ACT---TAGAAT..................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------GACGCAGAATACGACAA-AGAGC--------------A---------..............................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACGACAA-AGAGC--------------A---------ACT---TA......................................2211.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACGACAA-AGAGC--------------A---------ACT---........................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAA-AGAGC--------------A---------ACT---TAGAA...................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------GACGCAGAATACGACAA-AGAGC--------------A---------AC............................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACGACAA-AGAGC--------------A---------ACT---TAG.....................................2211.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGAATACGACAA-AGAGC--------------A---------AC............................................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGAATACGACAA-AGAGC--------------A---------ACT---........................................2611.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAATACGACAA-AGAGC--------------A---------ACT---TAG.....................................2511.001100000
......................................................TATAGGGTCGGAGATGTCTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.408080000
....CATGCTCATATCAACTCAGGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.306150000
..................................................ACTTTATAGGGTCGGAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.204400000
..............TCAACTCAGGAGGTGATCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153030000
........................................................................................ACACTTT-------TGACCAAAATTATAATACCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.153030000
..GACATGCTCATATCAACTCAGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102200000
........................................................................................................ACCAAAATTATAATACCCTCT--------GC-----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
.........................................................................CCTTCACTGCGTTGCACACTTT-------TGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102002000
..GACATGCTCATATCAACTCAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102002000
..........................................................................CTTCACTGCGTTGCACACTTT-------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000
........................................................................................................ACCAAAATTATAATACCCTCT--------GC-----A-------AGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
..............................................ATATACTTTATAGGGTCGGAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000
....CATGCTCATATCAACTCAGGAGGTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
......TGCTCATATCAACTCAGGAGGTGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
....................................................................................TTGCACACTTT-------TGACCAAAATTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
....CATGCTCATATCAACTCAGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.GGACATGCTCATATCAACTCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
......TGCTCATATCAACTCAGGAGGTGATCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
droBip1
CGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCTTTCACTGCGTTGCACACTTT-------TGGACAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------TTTA-AAA-------ATACA---------AATTTTTG-------------------------------------------------------------------------------------------------------------ACTTATATAAATTTTTT-------TTT------------------------ATTTTAATTGTTT------------------------AATTAATAA--ATTA-----------------AA------------------------------------------------TACAAAAGCAAAA------------AC----------AAACGAAA--------------AA-----AGAAATTTA--ATTA-AATATCT---GGCGASizeHit CountTotal NormTotal
No Reads
droKik1
CGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCT----------GC-----A-------AGGGTA---------------------------TAAAAA-----------TGGG-AAAAACCAAAT---TAA---------------------TT-----------------------------------------------------------T---------------------------------------------TTTTATTAATATT-------TTTATTTTA------------AT------------------------------------------------GTA-TTTT-----------------CTTGAA------------------------------------------------AACAAAGAATTTGACAA-ATATC--------------A---------ACT---T--AT----------------TAATAAA---A---AAAAASizeHit CountTotal NormTotal
No Reads
droFic1
CGTACATACATATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATATACTTTATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCTTTTGCTCT--GC-----A-------AGGGTA---------------------------TAAAAA-----------TACC-A-G------TA--TG------CTGTTTTC-----------------------------------------------------------------------------------------------------------------------TATTAGTGTG-------CTAATTTTA--------------------------------GTT----------------------------TG---TA-----------------AC------------------------------------------------TATAAACA-------TGTGA-----GC----------AAAAAGTA--------------AG-----AACAATTTG--ATTG-TGAAATT---AAAAASizeHit CountTotal NormTotal
No Reads
droEle1
CGGACATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------ACAA-GA------------G------CTTT----------------------T-------------------------------------AAATA----ATTTA-----------------TAAT-------GTGACATAATT--------TTT------------------------------TGTCCTCATCTAT----TA-------------------------------AAGCATTACATTCTT-----------------CT------------------------------------------------CATAAACA-------AGAAAA-AGAAC--------------A-----------G---TA-AGCTAA----------------AATAAGT---GGTAASizeHit CountTotal NormTotal
No Reads
droRho1
CGGACATGGCTATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------TTCAAGT------------A------CTGTTTTTTAA---A--TT-CA-AATT-------------------------------------TGATAATAA-TTTA-----------------TA-----------------------------------------------ATTAACCTTTTC--AGTT--CATGT----------------------------ATGTAAAATATAT-----G-------C---A-----A----------GT----------------------------------------------------------TTTAAAA-AGAGC--------------A-----------T---TAGATATAT----------------ATTAATA---AAAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CGGACATGGCTAGATCGACTCGTCTTGTGACGCTAATCAAGAATATATA-ACTTTATGGGGTCGGAAACGTCTGCTTCACCGCGTTGCAAACTTC-------TGACTGAAATCATTATAACCTCT--------GC-----A-------AGGGTA---------------------------TAAAAATAATGTATTATTTAG-GAA------TA--AG------CTGATCATACAATA-AAT---AAG--CTCATAGATCCTACAAATATTTTCATTAAGAAGCATTTAAATA----TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGAA-AAAGG--------------T---------TTT---TAGATGTAA----------------TATAATT---TGCATSizeHit CountTotal NormTotal
No Reads
droTak1
CGGACATGGCTATATCGACTCCCCTATTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTCCTTCACTGCGTTACAAACTTC-------TGACCAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAAAA-----------TATA-TAAT----------AAATATATCGAATA------------------------------------------------------------------CAATATAAATTTTTTAATTTTT---------------------------------------------------C----ATTTT--AGA------------------------------CTTCGACAT----------T--TTG------------TATCTTCAATATTTTGTATGA-----------------------------------------TATT---AAAGT----------ACAGC--------------A---------ACTTTTTAAAAATA----------------ATAAAAGT---GACAASizeHit CountTotal NormTotal
No Reads
droEug1
CGGACATGGCTATATCGACTCCCGTATTGATCGTGATCAAGAATATATATTTTTTAT-GGGTCGGAAACGTCTCCTTCACTGCGTTACAAACTTT-------TGACCAAAATTATAAAACCCTCT--------GC-----A-------AGGGTTTCCTTATTTTCCTATATGTAACCAATTTAATTA-----------TTAA-ACA------GC--AG------CTT-------------------------------------------------------------------------------------------------------------------------------TAGTATA-------TA-------------------------------GTTGTCTGATT----------------------------------------------------------------------------------------------------------GGCAAGAACTATTACCC-TGAGC--------------A---------AGG---T--AT----------------ACATAAATAAA---TTAGASizeHit CountTotal NormTotal
No Reads
dm3
CGGACATGGCCAGATCGACTCAGCTATTGATCCTGATCAAGAATATATATACATCAAATAGTCGGAAACATTTACTTCTGCCTGTTACATACTTT-------TCAACTAATTTAGTATACCCTTTTACTCT--ACTAGTAT-------CGGGTA---------------------------TAACAA-----------GAGA-GAAT----------GCTAAAGTCGAGTTA------A--AT-CT-ATTT-------------------------------------TGATATGAA------------------------------------------------------TATTAA-------------------AGTTATTGTTTGTATGT------------------------------------------------A-TTTC---------------------AA-----------------------------------------------ATCAAAAGAGTATAACAATAAAGC--------------A---------G-------------------------------------------CTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................TCCTGATCAAGAATATATATACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2444.25170000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030602050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCT--ACTAGTAT-------CGGGTA---------------------------TAACAA-----------GAGA-........................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
...........................................TATATATACATCAAATAGTCGGAAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATATACATCAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TTT-------TCAACTAATTTAGTATACCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGGAAACATTTACTTCTGCCTGTTACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TATGAA------------------------------------------------------TATTAA-------------------AGTTATTGTTTG...............................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATATACATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CT--ACTAGTAT-------CGGGTA---------------------------TAACAA-----------GAGA-........................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................TACTCT--ACTAGTAT-------CGGGTA---------------------------TAACAA-----------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................T-------------------------------------TGATATGAA------------------------------------------------------TATTAA-------------------AGTTATTGTT.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................ATATACATCAAATAGTCGGAAACATTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GAAACATTTACTTCTGCCTGTTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TAT-------CGGGTA---------------------------TAACAA-----------GAGA-GAAT----------GC........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TACATCAAATAGTCGGAAACATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAAGAGTATAACAATAAAGC--------------A---------G-------------------------------------------C.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGT------------------------------------------------A-TTTC---------------------AA-----------------------------------------------ATCAAAAGAGTA..................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................ACTCT--ACTAGTAT-------CGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATATACATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CTTT-------TCAACTAATTTAGTATACCCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TT-------TCAACTAATTTAGTATACCCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTTGTATGT------------------------------------------------A-TTTC---------------------AA-----------------------------------------------ATCAAAAGAG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................T----------GCTAAAGTCGAGTTA------A--AT-...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AACATTTACTTCTGCCTGTTACATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTATTGATCCTGATCAAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040300000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000100000
..........................................................................................................................................................................................A-----------GAGA-GAAT----------GCTAAAGTCGAG..............................................................................................................................................................................................................................................................................................................................................................................................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
..........CAGATCGACTCAGCTATTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........GCCAGATCGACTCAGCTATTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............ATCGACTCAGCTATTGATCCTGATCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TTACATACTTT-------TCAACTAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000100000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATTGATCCTGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGATCCTGATCAAGAATATATATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGCCTGTTACATACTTT-------TCAACTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTCTGCCTGTTACATACTTT-------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCAGCTATTGATCCTGATCAAGAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TACTTCTGCCTGTTACATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTGATCCTGATCAAGAATATATATACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATTGATCCTGATCAAGAATATATATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATTGATCCTGATCAAGAATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3060000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACAA-----------GAGA-GAAT----------GCTAAAGTC.................................................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................CAA-----------GAGA-GAAT----------GCTAAAGTCG................................................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CTTCTGCCTGTTACATACTTT-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCTATTGATCCTGATCAAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATCCTGATCAAGAATATATATACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................GCTATTGATCCTGATCAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................TATTGATCCTGATCAAGAATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CTTCTGCCTGTTACATACTTT-------TCAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTATTGATCCTGATCAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TA---------------------------TAACAA-----------GAGA-GAAT----------GCTA......................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................ATTGATCCTGATCAAGAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................A-GAAT----------GCTAAAGTCGAGTT............................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................AACAA-----------GAGA-GAAT----------GCTAAAGT..................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................TCTGCCTGTTACATACTTT-------TCAACTAATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGGACATGGCCAGATCGACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................CTTCTGCCTGTTACATACTTT-------TC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CTTCTGCCTGTTACATACTTT-------TCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTATTGATCCTGATCAAGAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCCTGATCAAGAATATATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CTTCTGCCTGTTACATACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACAA-----------GAGA-GAAT----------GCTAAAGTCT................................................................................................................................................................................................................................................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AACAA-----------GAGA-GAAT----------GCTAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.GGACATGGCCAGATCGACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGGACATGGCCAGATCGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATTGATCCTGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTATTGATCCTGATCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATTGATCCTGATCAAGAATAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACATGGCCAGATCGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
CGGACATGGCCAGATCGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................TATTGATCCTGATCAAGAATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGATCCTGATCAAGAATATATAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGATCCTGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGATCCTGATCAAGAATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCTGCCTGTTACATACTTT-------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTCTGCCTGTTACATACTTT-------TCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTGATCCTGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCTGCCTGTTACATACTTT-------TCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATCCTGATCAAGAATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................TCCTGATCAAGAATATATATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGGACAGGGCCAGATCGACTGGGCGATTGATACTGATCAAAAATATATATACTTTATATGGTCGGAAATTCTTCCTTCCATCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTTACCCT--ATGAGTAA-------CGAGTA---------------------------TAAAAA-----------TCGA-AA------------G------CCGTTTTATAA---A--TTTCG-ATTT-------------------------------------TGTTA---------------------------------------------------------------------------------------------------------------------TT-------------------------TTT------------GAATTT----------------------------------------------------------------CAGGATA---CAG-AAAGC--------------A-----------T---T-GAAGTA----------------------------AATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................ATATATATACTTTATATGGTCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24204.90980001000000007225000
..........................................ATATATATACTTTATATGGTCGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26203.15630000000000004221000
........................................AAATATATATACTTTATATGGTCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2662.171300000008030011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------CAGGATA---CAG-AAAGC--------------A-----------T---T-GAAGTA----------------------------AAT.2812.00200000000000020000
..................................................................................................................................T--ATGAGTAA-------CGAGTA---------------------------TAAAAA-----------TCGA-A.......................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010100000000
............................................ATATATACTTTATATGGTCGGAAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010000010000
..........................................ATATATATACTTTATATGGTCGGAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2741.25500000000000041000
..........................................ATATATATACTTTATATGGTCGGAAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
..............................................ATATACTTTATATGGTCGGAAATTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..............................................ATATACTTTATATGGTCGGAAATTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.....................................................................................................................................................................................TAAAAA-----------TCGA-AA------------G------CCGT...............................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------GAATTT----------------------------------------------------------------CAGGATA---CAG-AAAGC--------------A-----------T---T-GA....................................2811.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---CAG-AAAGC--------------A-----------T---T-GAAGT.................................1811.00100000000001000000
..........................................ATATATATACTTTATATGGTCGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.8517000000013220000000
......................................................................................ACATACTTT-------TCAACGAATCTAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.8517000000001700000000
.............................................................................................TT-------TCAACGAATCTAGTATACCCTTTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.701400000003800012000
...........................................TATATATACTTTATATGGTCGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.7014000000100000112000
.............................................................................................TT-------TCAACGAATCTAGTATACCCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.6513000130000000000000
......................................................................................................................................TGAGTAA-------CGAGTA---------------------------TA............................................................................................................................................................................................................................................................................................................................................................................................................................................1560.50300000000003000000
.............................................................................................TT-------TCAACGAATCTAGTATACCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.45900000003600000000
......................................................................................ACATACTTT-------TCAACGAATCTAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.25500000030002000000
............................................ATATATACTTTATATGGTCGGAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100000000000010000
...........................................TATATATACTTTATATGGTCGGAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25100000000000010000
........................................AAATATATATACTTTATATGGTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.22200000001000001000
........................................AAATATATATACTTTATATGGTCGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.20100000010000000000
........................................AAATATATATACTTTATATGGTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000010000000
..........................................ATATATATACTTTATATGGTCGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000000000003000
............................................ATATATACTTTATATGGTCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15300000030000000000
........................................AAATATATATACTTTATATGGTCGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.11100000000000010000
..............................................ATATACTTTATATGGTCGGAAATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.11100000000000010000
...........................................TATATATACTTTATATGGTCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000001001000
..............................................ATATACTTTATATGGTCGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200000020000000000
....................................................TTTATATGGTCGGAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17100.10100000000001000000
............................................ATATATACTTTATATGGTCGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000020000000000
..........................................ATATATATACTTTATATGGTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000001000001000
..................................................................................TGTTACATACTTT-------TCAACGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000010000000
............................................................................................TTT-------TCAACGAATCTAGTATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000100000000
.................................................................................CTGTTACATACTTT-------TCAACGAATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
.................................................................................CTGTTACATACTTT-------TCAACGAATCTAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000001000000000
.............................................................................................TT-------TCAACGAATCTAGTATACCCTTTTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000010000000000
............................................................................................TTT-------TCAACGAATCTAGTATACCCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
.................................................................................CTGTTACATACTTT-------TCAACGAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
......................................................................................................TCAACGAATCTAGTATACCCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010000000000000
CGGACAGGGCCAGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000010000000000
.................................................................................CTGTTACATACTTT-------TCAACGAATCTAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000100000000
............................................ATATATACTTTATATGGTCGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000000010000
......................................................................................................TCAACGAATCTAGTATACCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
.................................................................................CTGTTACATACTTT-------TCAACGAATCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000010000000
.............................................................................................TT-------TCAACGAATCTAGTATACCCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000001000000
...................................................CTTTATATGGTCGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
.........................................AATATATATACTTTATATGGTCGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000000010000
.....................................................................................TACATACTTT-------TCAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
droSec2
CGGACATGGCTAGATCTACTTGGCTATTGATACTGATCGAGAATATATATATTTTATATGGTCGGAAGCGCTTCCTTCTGCCTGTTACATACTTT-------TCAACAAATCTAGAATACCCTAT--------TA-----A-------CGGGTA---------------------------TGAAAA-----------GTAT-AA-T----------AAA---------------------TA-----------------------------------------------------------T---------------------------------------------AAATATTAATA--ATTGATAATTATTTTGGTTATTGATTTTGAGA----------------------------------------------------------A-----C----------GG---TTCAAAAAAAGAAAACCTTT-------------------------------------------AAAA------------------------------------------------------------------CAGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGGACATGGCCAGATCGACTCGGCTGTTGATCCTGATCAAGAAAATATATACATTGTATGGTCGGAA-GGCTTCCTTCGGCCTGTTACATACTTT-------TCCTCAAAT-----ATT-CCTCA---------------A-------ATAAAA---------------------------TGGACA-----------TCTA-AG---------T--GAA---------------------TT-----------------------------------------------------------T---------------------------------------------AAAATTTTTAA--ATTTAATATTGTTTATTTAACTGCTTTTATGTTT----TA-------------------------------AT-----G-------CAGTT-----T---TATCCTGAACGC-----------------------------------------CATC-------------------------------------------------------GACGTAG--------GCTAA---CA----C---AACAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................TATGGTCGGAA-GGCTTCCTTCGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
......................................................................CTTCCTTCGGCCTGTTACATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000000000
......................................................................CTTCCTTCGGCCTGTTACATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13101000000000
........GCCAGATCGACTCGGCTGTTGATCCTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.11100100000000
CGGACATGGCCAGATCGACTCGGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.11101000000000
droEre2
CGGACATGGCCAGATCGACTCGGCTATTGATCCTGCTTAAGAATATATAAA-----------CGGAAACGTCTCCTTTG-CCTGTTACATACTTT-------TAAACGAAAGTAGTATACCCTTTTATCCT--ACGAGTAA-------CGGGTA---------------------------TAATTA-----------CAAA-AT------------A---------------------ATT---AAA--T------------------------------------------------TT-------AAAAAATTTTCTAAA-------TTTGAATGATT--------TTT------------------------------AGAT-----------------------------------------------------------------C-----T------------------------------------------------------------TACG------T------------------CAGAATTACGCCAGAAACATT---TAGAGGTAT----------------GCTACTT---CAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
CAGACAGTGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGATGTTACACACATCCATTTTCACCACAAATCTAATATACCCCAATACTCATTTTGAGTAT-------CGGGTA---------------------------TAAAAA-----------TTAA-AAA------TA--GG------CTGTATTTTTA-------------------------------------------------------------------------------------------------------------ATAGATATATTAGTATA-------TCT------------------------ATTG--------TGATT-------------------------------------------------------------------------------------------------------------GGAGAATAGAAAAA-AAAA---------------------------A---T--AT----------------ATATAAAAATT---TATGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................TCACCACAAATCTAATATACCCCAATAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28206.45129012900000000
....................................TCAAGAATATATATACTTTATGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25204.208408400000000
....................................................................................................TCACCACAAATCTAATATACCCCAATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27203.507007000000000
..............................TGCTGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22203.406806800000000
....................................................................................................TCACCACAAATCTAATATACCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23203.306606600000000
....................................................................................................TCACCACAAATCTAATATACCCCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26202.905800580000000
....................................................................................................TCACCACAAATCTAATATACCCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.553102900000200
....................................................................................................TCACCACAAATCTAATATACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.002000200000000
................................................................................................................................TCATTTTGAGTAT-------CGGGTA---------------------------TA............................................................................................................................................................................................................................................................................................................................................................................................................................................21201.002002000000000
............................................................GTCGGAAACGATTCCTTCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.701401400000000
.........CTCAATCGACTCGGCTATTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.551100000000110
.....................................................................................................................................TTGAGTAT-------CGGGTA---------------------------TAAAAA-----------TTAA-AAA------...............................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100000000
.....................................................TTATGGGGTCGGAAACGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.4080800000000
....................................................................................................TCACCACAAATCTAATATACCCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.3060000000600
.............................................................TCGGAAACGATTCCTTCTGGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.2330300000000
.............................................................TCGGAAACGATTCCTTCTGGATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.2330100000020
..GACAGTGCTCAATCGACTCGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.2010100000000
..............................................................CGGAAACGATTCCTTCTGGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.2030300000000
......................................................................................................................................TGAGTAT-------CGGGTA---------------------------TAAAAA-----------TTAA-AG......................................................................................................................................................................................................................................................................................................................................................................................................................25110.1820000000020
..........................................ATATATATACTTTATGGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000030000
..................................................................................................TTTCACCACAAATCTAATATACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530300000000
..................................................................................................TTTCACCACAAATCTAATATACCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530300000000
...................................................CTTTATGGGGTCGGAAACGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000003000
..................................................................................................TTTCACCACAAATCTAATATACCCCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020020000000
.....................................................................................................CACCACAAATCTAATATACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
.............................................................TCGGAAACGATTCCTTCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000020
.................................................................................................................................CATTTTGAGTAT-------CGGGTA---------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020200000000
....................................TCAAGAATATATATACTTTATGGGGTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020200000000
..............................TGCTGATCAAGAATATATATACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020002000000
...................................................................................................................TATACCCCAATACTCATTTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
..................................................................................TGTTACACACATCCATTTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0810100000000
........................................................TGGGGTCGGAAACGATTCCTTCTGGATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29120.0810010000000
....................................................................CGATTCCTTCTGGATGTTACACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810100000000
.............................................................TCGGAAACGATTCCTTCTGGATGTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.0810100000000
......................................................................ATTCCTTCTGGATGTTACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.0810100000000
.................................................................AAACGATTCCTTCTGGATGTTACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710100000000
..............................................................CGGAAACGATTCCTTCTGGATGTTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.0710100000000
..............................................................CGGAAACGATTCCTTCTGGATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.0710100000000
............................................................................TCTGGATGTTACACACATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.0610100000000
.......TGCTCAATCGACTCGGCTATTGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.0610000000100
................................................ATACTTTATGGGGTCGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
................................................................................................................................TCATTTTGAGTAT-------CGGGTA---------------------------TAAAAA-----------T............................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
.................................TGATCAAGAATATATATACTTTATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
................................................................................................................................TCATTTTGAGTAT-------CGGGTA---------------------------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000000
...............CGACTCGGCTATTGATGCTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
.........................................AATATATATACTTTATGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................TACTCATTTTGAGTAT-------CGGGTA---------------------------TAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000001000
.................................TGATCAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.........................................................................................CACATCCATTTTCACCACAAATCTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
.....................................................................................................CACCACAAATCTAATATACCCCAATACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510010000000
................................................................................................................................TCATTTTGAGTAT-------CGGGTA---------------------------TAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
.............................................................................................................ATCTAATATACCCCAATACTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000000
...........................................TATATATACTTTATGGGGTCGGAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
.....................................................................................................................TACCCCAATACTCATTTTGAGTAT-------CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...........CAATCGACTCGGCTATTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000000
........................................................TGGGGTCGGAAACGATTCCTTCTGGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
droPer2
CAGACAGTGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGGTTCCTTCTGGACGTTACACACATCCATTTTCACCACAAATCTAATATACCCCAATACTCATTTTGAGTAT-------CGGGTA---------------------------TAAAAA-----------TTAA-AAA------TA--GG------CTGTATTTTTA-------------------------------------------------------------------------------------------------------------ATAGATATATTAGTATA-------TCT------------------------TTTG--------TGATT-------------------------------------------------------------------------------------------------------------GGAGAATAGGAAAA-AAAAA--------------A------------------AT----------------ATATAAAAATT---TATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................CGGAAACGGTTCCTTCTGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.002020000
..................................................................................CGTTACACACATCCATTTTCACCACAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.60120120000
...........................TGATGCTGATCAAGAATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000003
......................................................................GTTCCTTCTGGACGTTACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000100
......................................................................GTTCCTTCTGGACGTTACACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
..............TCGACTCGGCTATTGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102020000
...........................................................................TTCTGGACGTTACACACATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droWil2
CGGACATGGCTATATCAACTCAGCTTCTCATGCTGATCAAGAATATATATACTTTATCGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACATC-------TGACCAATTTTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAATAAACATTT---------------------------------------------------GT-ATTT-------------------------------------TGATATTAAATTTA-----------------AAATTTAACTTGAACTTGACATTTAATGC-------------------------------------------------------------------------GTG---------------------------------------------------------------------------------------------------------ATATTATATATCATCATTCACATTAAGTGAGATGAGTGT---T----------TT----ATAATTATAAGAAATTAATTCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................TGCGTTACAAACATC-------TGACCAATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.9539039000
......TGGCTATATCAACTCAGCTTCTCATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.5010010000
....................................................TTTATCGGGTCGGAAACGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100010
..........................................................................CTTCTGTGCGTTACAAACATC-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000
..GACATGGCTATATCAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................................TACAAACATC-------TGACCAATTTTATAATACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
droVir3
CGGACATGGCTATATCGACTCGGCTGTTGATGCTGATTAAGAATATATATACTTTATGGGGTCGGAGATGTCTCCTTCTATGCGTTACACATTTC-------ACGACAAAATTATAATACCCTCT--------GC-----A-------AGGGTA---------------------------TAAATATAAATA-----CTTA-ATA------GT-AGA---------TTTCTTTA---------------------------------------------------------------------------------------------------------------AGTTTTAGTAGTATT-------TTT------GTT----------------------------------------------------AATTATTGTAGATTG-----------------CT------------------------------------------------TACCTACGCAGAATATGACAA-CAAAA--------------A---------------------TA-------------AAATATA---A---ATATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................TAAGAATATATATACTTTATGGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.80160000000000000000000000000000000000160000000000000000000000000000
....................................................................................TTACACATTTC-------ACGACAAAATTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.5010000000000000000000000000009000010000000000000000000000000000000
..............................................................................TATGCGTTACACATTTC-------ACGACAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.306000000000000000000000000300000000030000000000000000000000000000
.....................................TAAGAATATATATACTTTATGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.255000000000000000000000000000000000050000000000000000000000000000
.....................................TAAGAATATATATACTTTATGGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.204000000000000000000000000000010000030000000000000000000000000000
..............................TGCTGATTAAGAATATATATACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.204000000000000000000000000000040000000000000000000000000000000000
....................................................................................TTACACATTTC-------ACGACAAAATTATAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000000000000400000000000000000000000000
..............................TGCTGATTAAGAATATATATACTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000000000000000300000000000000000000000000
..............TCGACTCGGCTGTTGATGCTGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000000000000000000000000000000000000003
.....................................TAAGAATATATATACTTTATGGGGTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000030000000000000000000000000000000000
................................................................................TGCGTTACACATTTC-------ACGACAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000000200000000000000000000000000000000
..............................TGCTGATTAAGAATATATATACTTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000001000000100000000000000000000000000
....................................................TTTATGGGGTCGGAGATGTCTCCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000020000000000000000000000000000
..............................................ATATACTTTATGGGGTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000020000000000000000000000000000000000
....................................................................................TTACACATTTC-------ACGACAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000200000000000000000000000000000000000000
.....................................TAAGAATATATATACTTTATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
......................................................TATGGGGTCGGAGATGTCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000002000000000000000000000000000000000000000000000000000000000
......................................AAGAATATATATACTTTATGGGGTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................TTCTATGCGTTACACATTTC-------ACGACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
.................................................TACTTTATGGGGTCGGAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
......TGGCTATATCGACTCGGCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
.....................................................................GTCTCCTTCTATGCGTTACACATTTC-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
....................................TTAAGAATATATATACTTTATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
....................................TTAAGAATATATATACTTTATGGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
.................................................TACTTTATGGGGTCGGAGATGTCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................TCCTTCTATGCGTTACACATTTC-------ACGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
..........................................................GGGTCGGAGATGTCTCCTTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................CTATGCGTTACACATTTC-------ACGACAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000100000000000000000000000000000000000000000000000000
........................................................................TCCTTCTATGCGTTACACATTTC-------AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................TACACATTTC-------ACGACAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................TCCTTCTATGCGTTACACATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
.............................................TATATACTTTATGGGGTCGGAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000001000000000000000000000000000000000000000
.................................TGATTAAGAATATATATACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................TTACACATTTC-------ACGACAAAATTATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................TTC-------ACGACAAAATTATAATACCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
....................................................................................TTACACATTTC-------ACGACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
....................................................................................TTACACATTTC-------ACGACAAAATTATAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...........................TGATGCTGATTAAGAATATATATACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
.........................GTTGATGCTGATTAAGAATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
........................................................TGGGGTCGGAGATGTCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000001000000000000000000000000000000000000000000000000000000
..............................................................................TATGCGTTACACATTTC-------ACGACAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000100000000000000000000000000000
...........................................................................................TTTC-------ACGACAAAATTATAATACCCTCT--------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
...................................................CTTTATGGGGTCGGAGATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...............................................................................ATGCGTTACACATTTC-------ACGACAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
...................................ATTAAGAATATATATACTTTATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
.......................CTGTTGATGCTGATTAAGAATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000010000000000000000000000000
droMoj3
CGGACAGGGCTATATCAACTCAGCTCGTCGCGCTGATCAAGAATATATATACTTTATGGGGTCTGCCACGCCTCCTTCTGCCCGTTACATACTTT-------TTCACAAAACCATTATACCCTGATTTCCC--ATTTTCAATGGGTTCAGGGTA---------------------------TAGAAAAAATGT--------A-TA---------T------------A----------------------C-------------------------------------AAATA----TATAATAAATTAAACAATTTTC---------------------------------------------------C------------------------ATCG--------TGCTTAAAATTAGCAAA----------TTATTTTA-TTTT---------------------------------------------------------------------------CAGAATA------------------CAAAATTATTGTATAAATAAT---T----------AT----ACAAATATATAAATT---TAAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................TACATACTTT-------TTCACAAAACCATTATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
.........................................................................................TACTTT-------TTCACAAAACCATTATACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000020
.......................................................................CTCCTTCTGCCCGTTACATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102000020
...............................................................TGCCACGCCTCCTTCTGCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
...........................................TATATATACTTTATGGGGTCTGCCACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
........................................................................................................CACAAAACCATTATACCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.......................................................................................CATACTTT-------TTCACAAAACCATTATACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.......................................................................................................TCACAAAACCATTATACCCTGATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..............................................................................TGCCCGTTACATACTTT-------TTCACAAAACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051100000
.......GGCTATATCAACTCAGCTCGTCGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
....................................................TTTATGGGGTCTGCCACGCCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.GGACAGGGCTATATCAACTCAGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.....................................................TTATGGGGTCTGCCACGCCTCCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
..........TATATCAACTCAGCTCGTCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droGri2
TGGACATAGCTATATCGACTCGGTTGTTGATCATGATCAAGAATATATATACTTTATGGGGTCGAAGATGCTTCCTTTTGCCTGTTACAAGCATT-------TGCACAAAACCATTATACTCTTTTTAGCC--ATTTTTAATGGTTTCGGGGTA---------------------------TAATTA-----------GAAC-AAA-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAAACTATGACACAGTTTTATTTATTATATATATACGAATAATAATACAA-TGAAT--------------A-----------G---T--AT----------------AAGTTAGAGTA---TTAGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:36 AM