ID:

dan_2791

 Coordinate:

scaffold_13337:22592265-22592415 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.9 -9.9 -9.7

Flybase annnotation

CDS [Dana\GF11003-cds]; exon [dana_GLEANR_10965:4]; intron [Dana\GF11003-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGTTTCTAAATCGAGTAGTGAATTCATTCTATAGAAACATTTATTTTAATAGGCCTGTTTAAAATTTAAATTTAATCGGCTAAGAACTCTATTACTGCTATCCTGCATTGTGCTATGCTCAGTTTGAAAGCTAGGGTGATATTGCCTTACATAATTATTATAAATTAAACTCGCAAATTGAATGTGTACACATTTCACAGATCAGCCGCCGAGAAAATTGTTCACGATATTAAAAAGGAAGCCAAAAAGA
**********************************************************************.........((.....((((((.....(((.((....((((.((...)).))))..)).)))))))))......))********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V105
male body		 V055
head
 V039
embryo
.................................................................................................................................................................................................TTTCACAGATCAGCCGCCGAG..................................... 21 0 1 2.00 2 0 0 1 0 1 0
..................................................................................................................................................................................................TTCACAGATCAGCCGCCGAGA.................................... 21 0 1 2.00 2 1 0 1 0 0 0
.............................................................................................................................................................................................CACATTTCACAGATCAGCCGC......................................... 21 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................................................TGAAAGCTAGGGTGATATTGC......................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0
......................................................................ATTTAATCGGCTAAGAACTCT................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0
...............................................................................................................................................................................................................................CACGATATTAAAAGGGAAGCC....... 21 1 1 1.00 1 0 1 0 0 0 0
.................................................................................TAAGAACTCTATTACTGCTAT..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..GTTTCTAAATCGAGTAGTGAA.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................CACAGATCAGCCGCCGAGAA................................... 20 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................AACTCTATTACTGCTATCCTG................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................TACACATTTCACAGATCAGCC........................................... 21 0 1 1.00 1 0 1 0 0 0 0
.........AATCGAGTAGTGAATTCATTCC............................................................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
........AAATCGAGTAGTGAATTCA................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................CTGCTATCCTGCATTGTGCTA....................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1
..................................................................................................................................GCTAGGGTGATATTGCCT....................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
..........................................TATTTTAATAGGCCTGTTTAA............................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CTATCCTGCATTGTGCTATGC.................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..................................................................TTAAATTTAATCGGCTAAGA..................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
....................................AACATTTATTTTAATAGGCCT.................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................TTTCACAGATCAGCCGCCGA...................................... 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................................TAATCGGCTAAGAACTCTATT............................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................................AATTTAATCGGCTAAGAACT.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................CGAACCTGCATTGTGCTATGC.................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0
.....................................................................AATTTAATCGGCTAAGAACTC................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
..............................................................................................................................GAAAGCTACGGTGATATTGC......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCACAGATCAGCCGCCGAG..................................... 19 0 1 1.00 1 0 0 1 0 0 0
............................................................................TCGGCTAAGAACTCTATTACT.......................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................TAAACTCGCAAATTGAATGTG................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................................................................ACACATTTCACAGATCAGCCG.......................................... 21 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................................................................CACAGATCAGCCGCCGAGAAA.................................. 21 0 1 1.00 1 1 0 0 0 0 0
.......TAAATCGAGTAGTGAATTCAT............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................................................................................AATCAGCCGCCGAGAAAATTGTTCAC......................... 26 1 1 1.00 1 0 0 0 1 0 0
....................................................................................GAACTCTATTACTGCTATCCT.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................AATTGTTCACGATATTAAAAAGGAA.......... 25 0 1 1.00 1 0 0 1 0 0 0
.......TAAATCGAGTAGTGGCTTC................................................................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 0 1 0
.................................................................TTTAAATTTAATCGGCTAAGA..................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................................................................................CATTTCACAGATCAGCCGCCG....................................... 21 0 1 1.00 1 1 0 0 0 0 0
..........................ATTCTATAGAAACATTTATTTT........................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.........................................TTATTTTAATAGGCCTGTTTAAAATT........................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................ACATTTCACAGATCAGCCGCC........................................ 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................TATCATGGATTGTGCTGTGCT................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1
.........................................................................................................................AGTGTGTAAGCTAGGTTGAT.............................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 1
...........................................................................................................................TTTGAGAGCTGGGGTGAT.............................................................................................................. 18 2 7 0.14 1 0 0 0 0 1 0
..........................................................................................................................GTTTGGAAGCTAGCGTG................................................................................................................ 17 2 9 0.11 1 0 0 0 0 1 0
..................................................................................................................................................................................................................................GATATTAAAAAGGACGCCCC..... 20 3 12 0.08 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................AAAAGGAAACCAAAAAGA 18 1 15 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................................ATTGAATGAGTACACTTT........................................................ 18 2 20 0.05 1 0 0 0 1 0 0
...................................................................................TCAACTCTATTGCTGCTATC.................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ACCAAAGATTTAGCTCATCACTTAAGTAAGATATCTTTGTAAATAAAATTATCCGGACAAATTTTAAATTTAAATTAGCCGATTCTTGAGATAATGACGATAGGACGTAACACGATACGAGTCAAACTTTCGATCCCACTATAACGGAATGTATTAATAATATTTAATTTGAGCGTTTAACTTACACATGTGTAAAGTGTCTAGTCGGCGGCTCTTTTAACAAGTGCTATAATTTTTCCTTCGGTTTTTCT
*********************************************************************************************************.........((.....((((((.....(((.((....((((.((...)).))))..)).)))))))))......))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V105
male body		 V055
head
 V039
embryo
............................................................................................................................................................................................................TCGGCGGCTCTTTTAACAAGT.......................... 21 0 1 2.00 2 2 0 0 0 0 0
..........................................................................TTAGCCGATTCTTGAGATAAT............................................................................................................................................................ 21 0 1 2.00 2 0 1 1 0 0 0
.....................................................CGGACAAATTTTAAATTTAAA................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................................AGTCGGCGGCTGTTTTAACA............................. 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................TGTGTAAAGTGTCTAGTCGGC.......................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................CTATAATTTTTCCTTCGGTTT.... 21 0 1 1.00 1 0 0 1 0 0 0
................................................................................................ACGATAGGACGTAACACTAT....................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..............................................................................CCGATTCTTGAGATAATG........................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
....................................................................................CTTGAGATGATGACGGTAGTA.................................................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................TGTAAATTGTCTAGTCGGCGG........................................ 21 1 1 1.00 1 0 0 0 1 0 0
.....................................................................................................AGGACGTAACACGATACGAGT................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................TCTAGTCGGCGGCTCTTTTAACAAG........................... 25 0 1 1.00 1 0 1 0 0 0 0
.....AGATTTAGCTCATCACTTAA.................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
..................................................................................TTCTTGAGATAATGACGATAG.................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
.............CTCATCACTTAAGTAAGATA.......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
........................................................................AATTAGCCGATTCTTGAGA................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
..........TAGCTCATCACTTAAGTAAGA............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................................................................................ACATGTGTAAAGTGTCTAGTC............................................. 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................GATAATGACGATAGGACGTAACACGA........................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0
.............................................................................GCCGATTCTTGAGATAATGAC......................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................................................................GTCTAGTCGGCGGCTCTTTT................................. 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................CACGATACGAGTCAAACTTTC........................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
................................................................................................ACGATAGGACGTAACACGATACGAG.................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................TGAGCGTTTAACTTACACATG............................................................. 21 0 1 1.00 1 0 0 0 1 0 0
..............................................................................................................................................................................................................GGCGGCTCTTTTAACAAGTGC........................ 21 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................GACGATAGGACGGAACACGAT....................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................AAGTGTCTAGCCGGCGGCG...................................... 19 2 3 0.33 1 0 0 0 0 1 0
............................................................................CCCCTATTCTTGAGATAATGA.......................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 1
..............................................................................................................................................................................................TGTAAACTTTCTAGTCGG........................................... 18 2 11 0.09 1 0 1 0 0 0 0
.................................................................................................................................................................................TAACTTTCACATGAGTAA........................................................ 18 2 13 0.08 1 0 0 0 0 1 0
............................................................................................TATGAGGATAGGACGTACC............................................................................................................................................ 19 3 20 0.05 1 0 0 1 0 0 0
.................................................................................................CGATAAGACGTAACACCGTA...................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:22592215-22592465 + dan_2791 TG--GTTTCTAAATCGAGTAGTGAATTCATTCTATAGAA---ACATTTATTTTAATAGGCCTGTTTAAAATTTAAATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACTCTATTACTGCTATCCTGC-ATTGTGCTATGCTCAGTTTGAAAGCTAGGGT-GATATTGCCTTACATAATTATTATAAATTAAACTCGCAAATTG-----AATG--TGTACACATTTCACAGATCAGCCGCCGAGAAAATTGTTCACGATATTAAAAAGGAAGCCAAAAAGA
droBip1 scf7180000396426:231235-231496 - TT--GAAGTGAA----AGAAGTGGAGTCATGCT-TAGGA---AGATTTATTTT--TATGCCGTTTT---------------TCGGATAGTTCTTCAATGACTTCTGC-----------------TGACTTTACAAAAAAAAACTGATTTAGAAACTGGTGTCATAAGTGAGTTTAAGTTT-----------------------------------------------------------CAGTTTAAAAACTAGGA-----------TTCCATACTTATTACAAGTTAAATACGCATATTACATATAATG--CCTAAACTTTTCGCAGATCAGCCGCCGAGCAAATTGTGAACGATTTTAAAAAGGAAGCCAAAAAGA
droKik1 scf7180000302695:159956-160018 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTTTCACAGATCGCTCCCCGAACAACTAGCAGACGACATTAAAAAGGAGGCTAAGAAGA
droFic1 scf7180000453830:155503-155569 - G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACTTCTTCCACAGATCCGCTGGTGAGAAACTTGTGGACGACATCAAAAAGGAGGCTAAAAAGA
droEle1 scf7180000490635:9964-10233 + TC--ATTTTTAAATGGACAACTAAAGCATATCGATGCAAGAAATATTTAAAGTATTGA--AAATAA---------------TC---------AAAAGTGGCTACAACTTATAATTTAAGCTAGCTAG------------------CTTTGGAAGCAAACGTCA--------------TTTAAATGTATCCCTGAAGAATGAAGACTTTTTTCGACAGTATCCTAAAATTGTGCTAGAATACGTTTAAAACTAAAAGCAAATGCTA------------------------------------------------CATTTCTTTTCACAGATCGGCCGGCGAGAAATTAGTAGACGACATTAAAAGGGAGGCCAAGAAGA
droRho1 scf7180000779806:33331-33426 - TA--ATTTTTAAAT---------------------------------------------------------------------------------------------------------------------------ATAAACCAA----------------------------------------------------------------------------------------------------------------AT---------------------------------------------TAATGCGTTAATTCTTTGCACAGATCGCCCGGCGAGAAATTAGTGGACGACATTAAAAAGGAGGCCAAGAAGA
droBia1 scf7180000302377:346408-346465 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACAGGTCGCCCGGCGAGAAGCTAGTGGATGACATCAAAAAGGAGGCCAAGAAGA
droTak1 scf7180000415879:85315-85409 - CATAATTTTTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAATCCAATCGGAA-----------------------------------------------TTAACTCCCTTCACAGGTCGCCCGGCGAGAAACTAGTGGACGACATTAAAAAGGAGGCCAAGAAGA
droEug1 scf7180000409801:442857-442914 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCAGATCACCCGGCGAGAAACTAGTGGATGACATCAAAAAAGAAGCCAAGAAAA
dm3 chr3L:22860492-22860549 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGCCCGGCGAGAAACTAGTGGATGACATCAAAAAGGAGGCCAAGAAGA
droSim2 3l:22346799-22346855 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATCGCCCGGCGAAAAACTGGTGGATGACATCAAAAAGGAGGCCAAGAAGA
droSec2 scaffold_11:2761281-2761337 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATCGCCCGGTGAAAAACTGGTGGATGACATCAAAAAGGAGGCCAAGAAGA
droYak3 3L:23334242-23334298 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATCGGCCGGCGAGAAACTAGTGGATGACATAAAAAAGGAGGCCAAGAAGA
droEre2 scaffold_4784:22502119-22502176 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGGCCGGCGAGAAACTAGTGGATGACATCAAAAAGGAGGCCAAGAAGA
dp5 XR_group6:3027931-3027992 - CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCCACAGGTCGGCCGCCGAACAGATCGTTCATGACATCAAAAAGGAGGCCAAGAAGA
droPer2 scaffold_9:1320788-1320849 - CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCCACAGGTCGGCCGCTGAACAGATCGTTCATGACATCAAAAAGGAGGCCAAGAAGA
droWil2 scf2_1100000004768:908370-908532 - TA--AATTTAGA------------------------------------------------TGTTTT---------------TC---------GAGACTCATTACAAGTT-----------------------------------------------AG---CATAAA-CAGTTTTTATTTCAATGTAATCA-------------TTTTTACTACTACTTACCTA--------------------------------------------------------------------CATATATTTC----GATCTGT-----GGATTTTCAGATCGCCGGCTGAGCAATTGGTGAGCGACATCAAAAAAGAGGCCAAGAAGA
droVir3 scaffold_13049:14354747-14354810 - CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTATTCACAGAACGCCCGTCGAACAAATTGTGCACGATATCAAAAAGGAGGCGAAAAAAG
droMoj3 scaffold_6680:12937349-12937414 + TG--T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCTTCGCAGATCGCCAACCGAACAGATAGTGCATGATATCAAAAAGGAGGCCAAAAAGA
droGri2 scaffold_15110:15866303-15866366 + TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATTCACAGAACACCAGTCGACCAAATTGTGCACGATATCAAAAAGGAAGCGAAAAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TG--GTTTCTAAATCGAGTAGTGAATTCATTCTATAGAA---ACATTTATTTTAATAGGCCTGTTTAAAATTTAAATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACTCTATTACTGCTATCCTGC-ATTGTGCTATGCTCAGTTTGAAAGCTAGGGT-GATATTGCCTTACATAATTATTATAAATTAAACTCGCAAATTG-----AATG--TGTACACATTTCACAGATCAGCCGCCGAGAAAATTGTTCACGATATTAAAAAGGAAGCCAAAAAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................TTTCACAGATCAGCCGCCGAG.....................................2112.002000101
.................................................................................................................................................................................................................................................................................................................................TTCACAGATCAGCCGCCGAGA....................................2112.002100001
............................................................................................................................................................................................................................................................................................................................CACATTTCACAGATCAGCCGC.........................................2112.002200000
....................................................................................................................................................................................................................................................TGAAAGCTAGGGT-GATATTGC................................................................................................................2112.002100001
...........................................................................ATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACTCT.........................................................................................................................................................................2112.002200000
......................................................................................TAAGA-----------------------------------------------------------------------------------------------------------------ACTCTATTACTGCTAT..............................................................................................................................................................2111.001100000
....GTTTCTAAATCGAGTAGTGAA.................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................CACAGATCAGCCGCCGAGAA...................................2011.001100000
..........................................................................................A-----------------------------------------------------------------------------------------------------------------ACTCTATTACTGCTATCCTG..........................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................TACACATTTCACAGATCAGCC...........................................2111.001010000
...........AATCGAGTAGTGAATTCATTCC.........................................................................................................................................................................................................................................................................................................................................................2211.001010000
..........AAATCGAGTAGTGAATTCA.............................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................CTGCTATCCTGC-ATTGTGCTA...............................................................................................................................................2111.001001000
.........................................................................................................................................................................................................................................................GCTAGGGT-GATATTGCCT..............................................................................................................1811.001000001
...............................................TATTTTAATAGGCCTGTTTAA......................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................CTATCCTGC-ATTGTGCTATGC............................................................................................................................................2111.001010000
.......................................................................TTAAATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................2011.001000010
......................................A---ACATTTATTTTAATAGGCCT............................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................TTTCACAGATCAGCCGCCGA......................................2011.001100000
..............................................................................TAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACTCTATT......................................................................................................................................................................2111.001010000
..........................................................................AATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACT...........................................................................................................................................................................2011.001100000
..........................................................................AATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACTC..........................................................................................................................................................................2111.001000010
..................................................................................................................................................................................................................................................................................................................................TCACAGATCAGCCGCCGAG.....................................1911.001000001
.................................................................................TCGGCTAAGA-----------------------------------------------------------------------------------------------------------------ACTCTATTACT...................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................TAAACTCGCAAATTG-----AATG--TG................................................................2111.001000001
...........................................................................................................................................................................................................................................................................................................................ACACATTTCACAGATCAGCCG..........................................2111.001000010
...................................................................................................................................................................................................................................................................................................................................CACAGATCAGCCGCCGAGAAA..................................2111.001100000
.........TAAATCGAGTAGTGAATTCAT............................................................................................................................................................................................................................................................................................................................................................2111.001000010
.........................................................................................GA-----------------------------------------------------------------------------------------------------------------ACTCTATTACTGCTATCCT...........................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................AATTGTTCACGATATTAAAAAGGAA..........2511.001000001
......................................................................TTTAAATTTAATCGGCTAAGA-----------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................2111.001000010
..............................................................................................................................................................................................................................................................................................................................CATTTCACAGATCAGCCGCCG.......................................2111.001100000
............................ATTCTATAGAA---ACATTTATTTT.....................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................TTATTTTAATAGGCCTGTTTAAAATT..................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................ACATTTCACAGATCAGCCGCC........................................2111.001100000
droBip1
TT--GAAGTGAA----AGAAGTGGAGTCATGCT-TAGGA---AGATTTATTTT--TATGCCGTTTT---------------TCGGATAGTTCTTCAATGACTTCTGC-----------------TGACTTTACAAAAAAAAACTGATTTAGAAACTGGTGTCATAAGTGAGTTTAAGTTT-----------------------------------------------------------CAGTTTAAAAACTAGGA-----------TTCCATACTTATTACAAGTTAAATACGCATATTACATATAATG--CCTAAACTTTTCGCAGATCAGCCGCCGAGCAAATTGTGAACGATTTTAAAAAGGAAGCCAAAAAGASizeHit CountTotal NormTotal
No Reads
droKik1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCTTTCACAGATCGCTCCCCGAACAACTAGCAGACGACATTAAAAAGGAGGCTAAGAAGASizeHit CountTotal NormTotal
No Reads
droFic1
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACTTCTTCCACAGATCCGCTGGTGAGAAACTTGTGGACGACATCAAAAAGGAGGCTAAAAAGASizeHit CountTotal NormTotal
No Reads
droEle1
TC--ATTTTTAAATGGACAACTAAAGCATATCGATGCAAGAAATATTTAAAGTATTGA--AAATAA---------------TC---------AAAAGTGGCTACAACTTATAATTTAAGCTAGCTAG------------------CTTTGGAAGCAAACGTCA--------------TTTAAATGTATCCCTGAAGAATGAAGACTTTTTTCGACAGTATCCTAAAATTGTGCTAGAATACGTTTAAAACTAAAAGCAAATGCTA------------------------------------------------CATTTCTTTTCACAGATCGGCCGGCGAGAAATTAGTAGACGACATTAAAAGGGAGGCCAAGAAGASizeHit CountTotal NormTotal
No Reads
droRho1
TA--ATTTTTAAAT---------------------------------------------------------------------------------------------------------------------------ATAAACCAA----------------------------------------------------------------------------------------------------------------AT---------------------------------------------TAATGCGTTAATTCTTTGCACAGATCGCCCGGCGAGAAATTAGTGGACGACATTAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotal
No Reads
droBia1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACAGGTCGCCCGGCGAGAAGCTAGTGGATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotal
No Reads
droTak1
CATAATTTTTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAATCCAATCGGAA-----------------------------------------------TTAACTCCCTTCACAGGTCGCCCGGCGAGAAACTAGTGGACGACATTAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotal
No Reads
droEug1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCAGATCACCCGGCGAGAAACTAGTGGATGACATCAAAAAAGAAGCCAAGAAAASizeHit CountTotal NormTotal
No Reads
dm3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGCCCGGCGAGAAACTAGTGGATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................TAACAGATCGCCCGGCGAGAA...................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAGTGGATGACATCAAAAAGG............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................AGTGGATGACATCAAAAAGGA...........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000200000
.................................................................................................................................................................................................................................................................................................................................TTAACAGATCGCCCGGCGAG.....................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................GATGACATCAAAAAGGAGGCC.......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000110000000
............................................................................................................................................................................................................................................................................................................................................CCCGGCGAGAAACTAGTGGATGACA.....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................................................................................................................................................................................................................................................................................GAAACTAGTGGATGACATCAAAAAGGA...........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CGCCCGGCGAGAAACTAGTGGA..........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ACTAGTGGATGACATCAAAAA..............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AGTGGATGACATCAAAAAGG............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GCCCGGCGAGAAACTAGTGGATGACA.....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GAAACTAGTGGATGACATCAAAAA..............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CGGCGAGAAACTAGTGGATGAC......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CGCCCGGCGAGAAACTAGTGGAT.........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAGTGGATGACATCAAAAAGGAGGCC.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................ACATCAAAAAGGAGGCCAAGA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GAAACTAGTGGATGACATCA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAAGGAGGCCAAGAAGA1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GGCGAGAAACTAGTGGATGACATCA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CTAGTGGATGACATCAAAAAG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ACAGATCGCCCGGCGAGAAACT................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGAAACTAGTGGATGACATCAAA................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................TGACATCAAAAAGGAGGCC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GATCGCCCGGCGAGAAACTAGT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CATCAAAAAGGAGGCCAAGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGATGACATCAAAAAGGAGGC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................................................GATGACATCAAAAAGGAGGCCAAGA...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................AACTAGTGGATGACATCAAAA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAGTGGATGACATCAAAAAGGAGGCCAA.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................TGGATGACATCAAAAAGGAGG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................ATCGCCCGGCGAGAAACTAGTGGA..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TAACAGATCGCCCGGCGAGAG...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGCCCGGCGAGAAAC.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTGGATGACATCAAAAAGGAG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AGTGGATGACATCAAAAAGGAA..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AACAGATCGCCCGGCGAGAAA..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGCCCGGCGAGAAACT................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ACTAGTGGATGACATCAAAAAGGAG..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAGTGGATGACATCAAAAAGGA...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CGAGAAACTAGTGGATGAC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TCGCCCGGCGAGAAACTAGTGGAT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GATGACATCAAAAAGGAGGC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TAACAGATCGCCCGGCGAGA....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATGACATCAAAAAGGAGGCCA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................CTAGTGGATGACATCAAAAAGGAG..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CCGGCGAGAAACTAGTGGATGA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CATCAAAAAGGAGGCCAAGAA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CCCGGCGAGAAACTAGTGGATGAC......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ACAGATCGCCCGGCGAGAAA..................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AGTGGATGACATCAAAAAGGAGGC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AACTAGTGGATGACATCAAA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CGGCGAGAAACTAGTGGATGA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ACATCAAAAAGGAGGCCA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CGAGAAACTAGTGGATGACATC...................2211.0010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTAACAGATCGCCCGGCGAGA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGCCCGGCGAG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................GGCGAGAAACTAGTGGAT.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATCGCCCGGCGAAAAACTGGTGGATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................TGGTGGATGACATCAAAAAGGAGGCCAAGA...3011.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................GATGACATCAAAAAGGAGGC........2011.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................ACAGATCGCCCGGCGAAAAAC.................................2111.00100000001000000000
droSec2
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATCGCCCGGTGAAAAACTGGTGGATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................GGTGAAAAACTGGTGGATGAC......................2111.0010100
..................................................................................................................................................................................................................................................................................................................................................GAAAAACTGGTGGATGACAT....................2011.0010010
droYak3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATCGGCCGGCGAGAAACTAGTGGATGACATAAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................ACAGATCGGCCGGCGAGAAAC.................................2111.00110000000000
..................................................................................................................................................................................................................................................................................................................................................GAGAAACTAGTGGATGACAT....................2011.00101000000000
droEre2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGATCGGCCGGCGAGAAACTAGTGGATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................ACATCAAAAAGGAGGCCAAGA...2111.0010000100
................................................................................................................................................................................................................................................................................................................................................................TGACATCAAAAAGGAGGCCAAGAA..2411.0010010000
...............................................................................................................................................................................................................................................................................................................................................GGCGAGAAACTAGTGGAT.........................1811.0010000100
..................................................................................................................................................................................................................................................................................................................................................GAGAAACTAGTGGATGAC......................1811.0010000010
dp5
CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCCACAGGTCGGCCGCCGAACAGATCGTTCATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................CTCTCCACAGGTCGGCCGCC........................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................AACAGATCGTTCATGACATCA..................2111.0010000000010
..................................................................................................................................................................................................................................................................................................................................................GAACAGATCGTTCATGACATCAAAAAGGA...........2911.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGGCCAAGAAGA1811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................ATCAAAAAGGAGGCCAAG....1811.0010100000000
droPer2
CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCCACAGGTCGGCCGCTGAACAGATCGTTCATGACATCAAAAAGGAGGCCAAGAAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................CAGATCGTTCATGACATC...................1813.003300000
.............................................................................................................................................................................................................................................................................................................................................................TCATGACATCAAAAAGGAGGCC.......2211.001100000
droWil2
TA--AATTTAGA------------------------------------------------TGTTTT---------------TC---------GAGACTCATTACAAGTT-----------------------------------------------AG---CATAAA-CAGTTTTTATTTCAATGTAATCA-------------TTTTTACTACTACTTACCTA--------------------------------------------------------------------CATATATTTC----GATCTGT-----GGATTTTCAGATCGCCGGCTGAGCAATTGGTGAGCGACATCAAAAAAGAGGCCAAGAAGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................TTTTCAGATCGCCGGCTGAGC....................................2112.00202000
......................................................................................................................................................................................................................................................................................................................TGT-----GGATTTTCAGATCGCCGG..........................................2111.00101000
....................................................................................................................................................................................................................................................................................................................................TCAGATCGCCGGCTGAGCAAT.................................2111.00100100
.......................................................................................................................................................................................................................................................................................................................GT-----GGATTTTCAGATCGCCGGC.........................................2111.00101000
............................................................................................................................................................................................................................CCTA--------------------------------------------------------------------CATATATTTC----GATCTGT-----............................................................2111.00100001
..............................................................................................................................................................................................................................................................................................................................GGATTTTCAGATCGCCGGCTG.......................................2111.00101000
.....................................................................................................................................................................................................................................................................................................ATATATTTC----GATCTGT-----GGAT........................................................2011.00110000
...............................................................................................................................................................................................................................................................................................................................GATTTTCAGATCGCCGGCTGA......................................2111.00101000
..........................................................................................................................................................................................................................................................................................................................................CGCCGGCTGAGCAATTGGTGAGC.........................2311.00100010
droVir3
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTATTCACAGAACGCCCGTCGAACAAATTGTGCACGATATCAAAAAGGAGGCGAAAAAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................CGTCGAACAAATTGTGCACGA.......................2111.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATATCAAAAAGGAGGCGA......1811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CGATATCAAAAAGGAGGC........1811.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ACGCCCGTCGAACAAATTGTGCACGATA.....................2811.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................CGCCCGTCGAACAAATTGTG............................2011.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GAACAAATTGTGCACGAT......................1811.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................GCACGATATCAAAAAGGAGGC........2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
TG--T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTCTTCGCAGATCGCCAACCGAACAGATAGTGCATGATATCAAAAAGGAGGCCAAAAAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATTCACAGAACACCAGTCGACCAAATTGTGCACGATATCAAAAAGGAAGCGAAAAAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:23 AM