ID:

dan_2728

 Coordinate:

scaffold_13337:19470572-19470722 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.8 -0.8 -0.3

Flybase annnotation

CDS [Dana\GF10852-cds]; exon [dana_GLEANR_10810:3]; intron [Dana\GF10852-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAATCGGAAACCAAATGGCCCTGGTGGTTTGGAACAGCAGCCACAGCAGGTAATGAATTAATCACACCAGAAACTACAACAGAAACATCATCGCTAAAGCAAAACTACGATAACATCTGATTAGTTTAACAAGAAAAATAAACATGCATTACCCCAGCGCGACAAAAAGAGCAGCATCAATAGTAACAACGTCTACGATTGCATCTTGGTGGCGGCCAATTAAAAGAACTAACTAACCCAAATGCGTTGC
******************************************************************************************************((((((..............))))))...............................******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V106
head
 M044
female body
 V105
male body		 V039
embryo
 V055
head
..............AATGGCCCTGGTGGTTTGGAACAGC.................................................................................................................................................................................................................... 25 0 1 3.00 3 0 3 0 0 0 0
......................................................................................................AAACTACGATAACATCTGATTAGT............................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0
AGAATCGGAAACCAAATGGCCCTGGT................................................................................................................................................................................................................................. 26 0 1 2.00 2 1 0 1 0 0 0
.......................GGTGGTTTGGAACAGCAGCC................................................................................................................................................................................................................ 20 0 1 2.00 2 0 0 0 2 0 0
...............ATGGCCCTGGTGGTTTGGAACAGC.................................................................................................................................................................................................................... 24 0 1 2.00 2 1 0 0 1 0 0
.....................CTGGTGGTTTGGAACAGCAGCC................................................................................................................................................................................................................ 22 0 1 2.00 2 0 1 0 1 0 0
......................................................................................................................................................................................................................................TAACTAACCCAAATGCGTTGC 21 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................AAATAAACATGCATTACCCCAGC............................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................TACGATAACATCTGATTAGTTTAAC........................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................CAACGTCTACGATTGCATCTTGGT........................................ 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................AGCGCGACAAAAAGAGCA............................................................................. 18 0 1 1.00 1 0 0 0 0 1 0
...............ATGGCCCTGGTGGTTTGGAACAGCA................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................ATTGCATCTTGGTGGCGGCCA................................ 21 0 1 1.00 1 0 1 0 0 0 0
........AAACCAAATGGCCCTGGTGGT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.........AACCAAATGGCCCTGGTGGTTTG........................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
..........................GGTTTGGAACAGCAGCCACAGCAGGT....................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................TAAACATGCATTACCCCAGCGCGACAAA.................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1
.............................TTGGAACAGCAGCCACAGCAGA........................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................ATAAACATGCATTACCCCAGCGC.......................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..............AATGTCCCTGGTGGTTTGGAACATC.................................................................................................................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................AACGTCTACGATTGCATCTTGGTGGC..................................... 26 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................ACTAACCCAAATGCGTTGC 19 0 1 1.00 1 0 1 0 0 0 0
..................................................................................GAAACATCATCGCTAAAGCAAAACT................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................AGCGCTAAAGCAAAACTACGATAACATCT.................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................GTCTACGATTGCATCTTGGTGGCGGC.................................. 26 0 1 1.00 1 1 0 0 0 0 0
.................GGCCCTGGTGGTTTGGAACAGCAGC................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0
.....CTGAAACCAAATGGCCCTGGTG................................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.................GGCCCTGGTGGTTTGGAACAGCAG.................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
................TGGCCCTGGTGGTTTGGAACAGCA................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.GAATCGGAAACCAAATGGCCCTGGTGGC.............................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
............................TTTGGAACAGCAGCCACAGCAGAAC...................................................................................................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
............................................................AATCACACCAGAAACTAC............................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
.....................CTGGTGGTTTGGAACAGCAGC................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
.........................................................................ACTACAACAGAAACATCATCGCTAAAGC...................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
................TGGCCCTGGTGGTTTGGA......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................................................................................................AGAACTAACTAACCCAAATGCGTTGC 26 0 1 1.00 1 0 0 0 0 1 0
.................GGCCCTGGTGGTTTGGAACAGC.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
...........................GTTTGGAACAGCAGACACAGC........................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......................TGGTGGTTTGGAACAGCAGC................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0
.............................................................................CAACAGAAACATCATCGCTAAAGC...................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................CAACGTCTACGATTGCATCTTGGTGGC..................................... 27 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................GCATCTTGGTGGCGGCCAATTAAAAG........................ 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................GGTGGCGGCCAATTAAAAGAACTAAC................. 26 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................................ATTAAAAGAACTAACTAACCCAAATGC..... 27 0 1 1.00 1 1 0 0 0 0 0
...........................GTTTGGAACAGCAGCCACAGC........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................................................................CGATTGCATCTTGGTGGCGGC.................................. 21 0 1 1.00 1 0 0 0 0 1 0
................................................................................................AAAGCAAAACTACGATAACATCT.................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..........................................................TTAATCACACCAGAAACTACAAC.......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..............AATGGCCCTGGTGGTTTGGAACAGCA................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................................AAAATAAACATGCATTACCCCAGC............................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................GAACTAACTAACCCAAATGCGT... 22 0 1 1.00 1 0 0 0 0 0 1
...............................................................................................................................................................................................GTCTACGATTGCATCTTGGT........................................ 20 0 1 1.00 1 1 0 0 0 0 0
..........ACCAAATGGCCCTGGTGGTTTGGAACA...................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0
.......................................................................AAACTACAACAGAAACATC................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................CATTACCCCAGCGCGGCAAAAAGAGCG............................................................................. 27 2 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................TACCCCAGCGCGACAAAAAGAGCAGC........................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
..............................................................................AACAGAAACATCATCGCTAAA........................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..........................................CACAGCAGGTAATGAATT............................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................AATAAACATGCATTACCCC............................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................................................GAAACATGATCGCTAAAGAA..................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 1 0
.....CGGAAACCAAAAGGCGTTGGT................................................................................................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0 0
................................................................................CAGAAACGTCAGCGCTAAA........................................................................................................................................................ 19 2 3 0.33 1 0 0 0 0 0 1
.......................................................................................................................GATTAGTTTAACAGGACA.................................................................................................................. 18 2 6 0.17 1 1 0 0 0 0 0
...............................GTAACAGCAGCCACAGCAG......................................................................................................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0
...........................GTCTGAAAAAGCAGCCACAGC........................................................................................................................................................................................................... 21 3 9 0.11 1 1 0 0 0 0 0
..............................TGAAACGGCTGCCACAGCAGG........................................................................................................................................................................................................ 21 3 10 0.10 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................AGAAGAATAAACTAACCCAAA........ 21 3 19 0.05 1 1 0 0 0 0 0
........................................................................................................................ATTAATTTAAGAAGAAAAATA.............................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

TCTTAGCCTTTGGTTTACCGGGACCACCAAACCTTGTCGTCGGTGTCGTCCATTACTTAATTAGTGTGGTCTTTGATGTTGTCTTTGTAGTAGCGATTTCGTTTTGATGCTATTGTAGACTAATCAAATTGTTCTTTTTATTTGTACGTAATGGGGTCGCGCTGTTTTTCTCGTCGTAGTTATCATTGTTGCAGATGCTAACGTAGAACCACCGCCGGTTAATTTTCTTGATTGATTGGGTTTACGCAACG
********************************************************************************************((((((..............))))))...............................****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V055
head
..................................TGACGTCGATGTCGTTCATTAC................................................................................................................................................................................................... 22 3 2 0.50 1 0 1 0
...............................................................................................................................................................................................................ACCACCGGAAGTTAATTTTCT....................... 21 3 8 0.25 2 2 0 0
.........................ACCAAACCTCCTCGTCGATGT............................................................................................................................................................................................................. 21 3 5 0.20 1 1 0 0
.............................................................................................................CTATTGTCGACCAAACAAAT.......................................................................................................................... 20 3 13 0.08 1 0 0 1
................................................................................................................................................................................................................CCACCGGAAGTTAATTTTCT....................... 20 3 17 0.06 1 1 0 0
....................................................................................................................................................GATTGGGGTCGCGCTGC...................................................................................... 17 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:19470522-19470772 + dan_2728 AGAATCGGAAACCAAATGGCCCTG------GTGGTTTGGAACAGCAG---------CCACAGCAGGTAATGAATTAATCACA---C----------------------------------CAGA--AACTACAAC-AGAA---ACATCATCGCTAAAGCAAA-----------------------------ACTACGATAA---------CATCTG-ATTAGTTTAACAAGAAAAATAAAC---ATGCA--TTACCC----------------C--------AGCGCGACA--------------AAAA--GAGC-----AGCA-TCA------------ATAGTAA---C---AACGTCTACG---ATTG-------CATCT-------TGGTGGCGGCCAA--T----------------TAAAA-G------AACTA-------------------ACTAACCC-AAAT--GCGTTGC--
droBip1 scf7180000396360:664932-665189 + AGAATCGGAAACCAAATGGCCCTG------GTGGTTTGGAACAGCAG---------CCACAGCAGGTAATGAATTAATCACA---C----------------------------------CAGA--AACTACAAA-AGAAACTACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA---------CATCTG-ATTAGTTTAACAAGAAAAAAAAAC---ATGCA--CTATTC-------------------------AGAGCGAAA------------GC----ATTATC-----TGCA-TTA------------ATAATAA---C---AACGTCTACG---ATAG-------GAGCA----TCTTGGTGGCGGCCAA--T-----------------AAAA-AC--AAAAACTA-------------------ACC----CAAAAT--GCGTTCAAA
droKik1 scf7180000302391:696543-696790 + AGAATCGGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG------CCGCCACAGCAGGTAATGAACTAATCAC----ACGA-------------------------------CAGAACA---ACAACTTGAA---ACATCTTTGCCAAAGCAAAAAAAAAAAAGAACATGAAAT---------ACTACGATAACA----CAGCATCT--------------------------------------------------------------------------------------------------GC-----GGCA-ACT-TAACAACC---ACAACAACAGCAACAGTATCTACA--AATAA-------CAACCT------GGGTGTCGGTCACACT----------------TGAA--AT--------TATAAGAAAATA---------A-----------C--AACTTAA-A
droFic1 scf7180000454113:2520367-2520591 + AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---ACAA-------------------------------CCGA--A---ACAAC-TGAA---ACATCTTCGCCAAAGTAAA-----------------------------ACTACGATAAC------AACATCTG-ACTAGTA--------------A-----------------------------------AC---ATC--------------------GGCAACAGCCAGT-----GGCA-GCC------------ATAACAA---C---AAGGTCTAC-------------------A------TGGGTGGTGGCCAC--T----------------TAAAAAAACGAAAAACTA-------------------ACT----A-AAGT--GCACTGA--
droEle1 scf7180000491193:4054973-4055176 - AGAATCGGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AGAA-------------------------------CAAA--A---ACAGT-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA---------CATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------GGCAACAACCGGC-----GGCA-ACC------------ATAACAA---C---AA-----------------------------------GGTGGCGGTCAC--T----------------TGAA--------AAACTA-------------------ACT----A-AAAT--GCATTGC--
droRho1 scf7180000773422:146696-146913 + AGAATCGGAAACCGAATGGTCCCGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AGAA-------------------------------CAAA--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------GGCAACAACCAGC-----GGCA-ACC------------A-------------AAAGTCTACA---ACAA-------TAACA-------TGGTGGCGGTCAC--T----------------TGAA--------AAACTA-------------------ACT----A-AAGT--GCATTGC--
droBia1 scf7180000302428:4367059-4367284 - AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---ACAA-------------------------------CAGA--A---ACAAC-CGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAACA-CCACAACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAACCATC-----GGCA-GCC------------ATAGCAA---C---AAGGTCTACG---ATAA-------TAACA-------CGGTGGCGGTC----T----------------TAG---------AAACGA-------------------ACT----A--AAT--GCATTAC--
droTak1 scf7180000415254:490641-490877 + AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCAAC---ACAA-------------------------------CAGC--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ATTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGCCAGC-----GGCA-AACTAAAC---A---ACAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGCGGTCTC--T----------------TGAAA-ACT-AAAGACTA-------------------ACA----A-CAAT--GCATTAC--
droEug1 scf7180000409466:4206064-4206295 - AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---ACAG-------------------------------CAGA--A---ACAAC-TGAA---ACTTCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-AATAGTA--------------A-----------------------------------AC---ATC--------------------AACTACAACTAGC-----GGCA-ACT------------ATAACAA---C---AAAGTCTACA---ATAA-------TAACA-------TGGTGGAGGTCTC--T----------------TTACA-AATGAAAGACTT-------------------ACT----A-AAAT--GCATTAC--
dm3 chr3L:12115582-12115825 - AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCAGAGAAGGTAATGAACTAATCACC---AG-------------------CATCATCACAACAGCAGA--A---ACAAC-TGAA---ACATCTTCGCCGAAACAAA-----------------------------CCTACGATAAC------AACATCTAAATTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAGT-----CGCA-AGC------------ATAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGAAGGCGTC--T----------------TAAAA-ACTAAACAACTA-------------------ACT----A-AAGT--GCATTGTGT
droSim2 3l:11814126-11814369 - dsi_6527 AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AG-------------------CACCACCACGACAGCAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------AACATCTAAACTAGTA--------------A-----------------------------------AC---ATC------------------ACAGCAACAGTCAGC-----GGCA-AGC------------CTAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGAGGCGTC--T----------------TGAAA-ACCGAACAACTA-------------------ACT----A-AAGT--GCATTGC--
droSec2 scaffold_0:4300341-4300584 - AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AG-------------------CACCACCACGACAGCAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------AACATCTAAACTAGTA--------------A-----------------------------------AC---ATC------------------ACAGCAACAGTCAGC-----GGCA-AGA------------CTAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGAGGCGTC--T----------------TGAAA-ACTGAACAACTA-------------------ACT----A-AAGT--GCATAGC--
droYak3 3L:12163502-12163734 - dya_774 AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCAGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACCACCACGA-------------------------------CAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAGC-----GGCATACC------------ATAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGAGGCCTT--T----------------TGAAA-ACTGAAAAACTA-------------------ACT----A-AAGT--GCATTAC--
droEre2 scaffold_4784:12105280-12105473 - AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACCAGCACGA-------------------------------CAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAAC-----GGCA-ACC------------ATAACAA---C---AAGGTCTA-------------------------------------------------------------------------AACTA-------------------AC-----A-AAGT--GCATTAC--
dp5 XR_group6:5904957-5905178 - dps_3067 AGAATCGGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAGCCACAGCAGGTAATGAACTAATCACC---AC----------------------------------TGA--C---ACAAATAGAA-----AACATCGCCAAAGCAAC-------------------------------------------------ATCCA-ACC---GTAACAACAAAAAAGAAC---AACCA--CTAATC---------------------------------------------AGCA--TGGCGGC-----GGCA-ACA------------ACAACAG---C---AAGAAATA----------------CTACT-------TGGTGTCGGCAAC--A----------------TAGAA-ATAGAAACACTC-------------------CC-------------------A--
droPer2 scaffold_47:405132-405353 - dpe_1717 AGAATCGGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAGCCACAGCAGGTAATGAACTAATCACC---AC----------------------------------TGA--C---ACAAATAGAA-----AACATCGCCAAAGCAAC-------------------------------------------------ATCCA-ACC---GTAACAACAAAAAAGAAC---AACCA--CTAATC---------------------------------------------AGCA-----TGGC-----GGCA-GCA------------A---CAA---C---AACAGCAACA---AATA-------CTACT-------TGGTGTCGGCAAC--A----------------TAGAA-ATAGAAACACTC-------------------CC-------------------A--
droWil2 scf2_1100000004511:8563580-8563869 - dwi_668 CGAATCGGAAACCAAATGGCCCTGGTG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATCAACTAAAAACC---AAA-------------------ACCAGCCATC------A--AGCTACAAC-AACAACAACAATTTAACAACAAC--A-----------------------------ACCACGATAGC------AACAA-TA-AC----------------------------CA--CTA-TCAGCATATAGAGAAGTGC--------AGCGC---------------GGTAAAAG-CAGC-----GGCA----------------GTAACAA---C---AACATCTACA---ACAACAAACATCAACA-------TGGTGGCGGCAACACTAACAACAAATATAAACTAAA--------AAAACA-ACTA-----AAACCACTAACT----AAAGATGCGCATTAG-G
droVir3 scaffold_13049:22947348-22947605 + dvi_21063 AGAATCGTAAACCCAATGGACCTGGCGGCGGCGGCATGGAGCAGCAG---------TCACAGCAGGTAATGAACTAAAAGCC---AAA----------------------------------CA--A---ACAAACAAAA-----AA---------AGAAAA--------------ACAAACAAACATACACCGACGATAACAAGCACATCATCA-------------------------------------------------------------------AGAACAACAACATCTTTAACAACAACAACTAGCAGCACTGCA-AGA---AC---AACAA---AAA---C---AATAACTATAACAACAA-------GAACATGGCTTTCGGTGGCGGCAAC--T----------------A----------CAAACTA-------------------ACG----A-AAAT--GCATTAA--
droMoj3 scaffold_6680:17559030-17559271 + dmo_2521 AAAATCGTAAGCCCAATGGACCTGGCGGCGGTGGCATGGAACAACAG---------TCACAGCAGGTAATGAACTAAAAGCC---AAA-------------------AGCA-------------------------------------------------A-----------------------ACAAACACCAACGATAACAACCACAACATC-------ATC--------AACAACAACAACTACTACT-----------------------AC---ATC--------------------TTTAACAACAAGCAGTACTGCA-AAA---AC---AACAATAATAA---C---AACATCAACA---ACAA-------CAGGGTGGCTTTCGGTGGCGGCAAC--T----------------A----------CAAACTA-ACGAG---------------A----A-TAAT--ACATTA---
droGri2 scaffold_15110:18221205-18221425 + AGAATCGTAAGCCCAATGGACCTGGAG---GTGGCATGGAGCAGCAG---------CCACAGCAGGTAATCAACTAGAAGCC---AAACCAAAAACAAATCACCAACCCGTT-------------------------------------------------A-----------------------------ACAACAAAAAC------AACAACCA-AT-------------------------------------------------------ACATCATC--------------------AACAACAACTAGCAGCCCTGCA-ACA---AC---AACAATA------------------------ATAA-------CAACTTGGCTTTCGGTGGCGGCAAA----------------------CA-ACACAAAAACTA-ACGA----------------A----A-AAAC--GCATTGA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGAATCGGAAACCAAATGGCCCTG------GTGGTTTGGAACAGCAG---------CCACAGCAGGTAATGAATTAATCACA---C----------------------------------CAGA--AACTACAAC-AGAA---ACATCATCGCTAAAGCAAA-----------------------------ACTACGATAA---------CATCTG-ATTAGTTTAACAAGAAAAATAAAC---ATGCA--TTACCC----------------C--------AGCGCGACA--------------AAAA--GAGC-----AGCA-TCA------------ATAGTAA---C---AACGTCTACG---ATTG-------CATCT-------TGGTGGCGGCCAA--T----------------TAAAA-G------AACTA-------------------ACTAACCC-AAAT--GCGTTGC--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............AATGGCCCTG------GTGGTTTGGAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003000003
................................................................................................................................................................AA-----------------------------ACTACGATAA---------CATCTG-ATTAGT....................................................................................................................................................................................................................................................................2412.002020000
AGAATCGGAAACCAAATGGCCCTG------GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002110000
.......................G------GTGGTTTGGAACAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000020
...............ATGGCCCTG------GTGGTTTGGAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002010010
.....................CTG------GTGGTTTGGAACAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000011
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-------------------ACTAACCC-AAAT--GCGTTGC--2111.001000010
.........................................................................................................................................................................................................................................AAATAAAC---ATGCA--TTACCC----------------C--------AGC......................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................TACGATAA---------CATCTG-ATTAGTTTAAC...............................................................................................................................................................................................................................................................2511.001000001
..............................................................................................................................................................................................................................................................................................................................................................C---AACGTCTACG---ATTG-------CATCT-------TGGT.........................................................................................2411.001010000
..........................................................................................................................................................................................................................................................................................AGCGCGACA--------------AAAA--GAGC-----A..................................................................................................................................................................1811.001001000
...............ATGGCCCTG------GTGGTTTGGAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................ATTG-------CATCT-------TGGTGGCGGCCA.................................................................................2111.001000001
........AAACCAAATGGCCCTG------GTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........AACCAAATGGCCCTG------GTGGTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................GGTTTGGAACAGCAG---------CCACAGCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................TAAAC---ATGCA--TTACCC----------------C--------AGCGCGACA--------------AA................................................................................................................................................................................2811.001000100
...................................TTGGAACAGCAG---------CCACAGCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................ATAAAC---ATGCA--TTACCC----------------C--------AGCGC....................................................................................................................................................................................................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................AACGTCTACG---ATTG-------CATCT-------TGGTGGC......................................................................................2611.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAACCC-AAAT--GCGTTGC--1911.001000001
.........................................................................................................................................GAA---ACATCATCGCTAAAGCAAA-----------------------------ACT.................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................GTCTACG---ATTG-------CATCT-------TGGTGGCGGC...................................................................................2611.001010000
.................GGCCCTG------GTGGTTTGGAACAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.................GGCCCTG------GTGGTTTGGAACAGCAG---------...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................TGGCCCTG------GTGGTTTGGAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.GAATCGGAAACCAAATGGCCCTG------GTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..................................TTTGGAACAGCAG---------CCACAGCAGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................AATCACA---C----------------------------------CAGA--AACTAC...............................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................CTG------GTGGTTTGGAACAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................ACTACAAC-AGAA---ACATCATCGCTAAAGC....................................................................................................................................................................................................................................................................................................................................2811.001010000
................TGGCCCTG------GTGGTTTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................A-G------AACTA-------------------ACTAACCC-AAAT--GCGTTGC--2611.001001000
.................GGCCCTG------GTGGTTTGGAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
......................TG------GTGGTTTGGAACAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................CAAC-AGAA---ACATCATCGCTAAAGC....................................................................................................................................................................................................................................................................................................................................2411.001010000
..............................................................................................................................................................................................................................................................................................................................................................C---AACGTCTACG---ATTG-------CATCT-------TGGTGGC......................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................G-------CATCT-------TGGTGGCGGCCAA--T----------------TAAAA-G------................................................2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCGGCCAA--T----------------TAAAA-G------AACTA-------------------AC......................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................A--T----------------TAAAA-G------AACTA-------------------ACTAACCC-AAAT--GC.......2711.001010000
.................................GTTTGGAACAGCAG---------CCACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................................................................................................................................................................................................................................................................................................................................CG---ATTG-------CATCT-------TGGTGGCGGC...................................................................................2111.001001000
..........................................................................................................................................................AAAGCAAA-----------------------------ACTACGATAA---------CATCT............................................................................................................................................................................................................................................................................2311.001010000
.........................................................................TTAATCACA---C----------------------------------CAGA--AACTACAAC-...........................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............AATGGCCCTG------GTGGTTTGGAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................AAAATAAAC---ATGCA--TTACCC----------------C--------AGC......................................................................................................................................................................................................2411.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................G------AACTA-------------------ACTAACCC-AAAT--GCGT.....2211.001000100
.....................................................................................................................................................................................................................................................................................................................................................................GTCTACG---ATTG-------CATCT-------TGGT.........................................................................................2011.001010000
..........ACCAAATGGCCCTG------GTGGTTTGGAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................A--AACTACAAC-AGAA---ACATC...............................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................................................................................................................................................................................................................TACCC----------------C--------AGCGCGACA--------------AAAA--GAGC-----AGC................................................................................................................................................................2611.001100000
....................................................................................................................................AAC-AGAA---ACATCATCGCTAAA......................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................CACAGCAGGTAATGAATT........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..........................................................................................................................................................................................................................................AATAAAC---ATGCA--TTACCC----------------C--------.........................................................................................................................................................................................................1911.001010000
droBip1
AGAATCGGAAACCAAATGGCCCTG------GTGGTTTGGAACAGCAG---------CCACAGCAGGTAATGAATTAATCACA---C----------------------------------CAGA--AACTACAAA-AGAAACTACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA---------CATCTG-ATTAGTTTAACAAGAAAAAAAAAC---ATGCA--CTATTC-------------------------AGAGCGAAA------------GC----ATTATC-----TGCA-TTA------------ATAATAA---C---AACGTCTACG---ATAG-------GAGCA----TCTTGGTGGCGGCCAA--T-----------------AAAA-AC--AAAAACTA-------------------ACC----CAAAAT--GCGTTCAAASizeHit CountTotal NormTotal
No Reads
droKik1
AGAATCGGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG------CCGCCACAGCAGGTAATGAACTAATCAC----ACGA-------------------------------CAGAACA---ACAACTTGAA---ACATCTTTGCCAAAGCAAAAAAAAAAAAGAACATGAAAT---------ACTACGATAACA----CAGCATCT--------------------------------------------------------------------------------------------------GC-----GGCA-ACT-TAACAACC---ACAACAACAGCAACAGTATCTACA--AATAA-------CAACCT------GGGTGTCGGTCACACT----------------TGAA--AT--------TATAAGAAAATA---------A-----------C--AACTTAA-ASizeHit CountTotal NormTotal
No Reads
droFic1
AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---ACAA-------------------------------CCGA--A---ACAAC-TGAA---ACATCTTCGCCAAAGTAAA-----------------------------ACTACGATAAC------AACATCTG-ACTAGTA--------------A-----------------------------------AC---ATC--------------------GGCAACAGCCAGT-----GGCA-GCC------------ATAACAA---C---AAGGTCTAC-------------------A------TGGGTGGTGGCCAC--T----------------TAAAAAAACGAAAAACTA-------------------ACT----A-AAGT--GCACTGA--SizeHit CountTotal NormTotal
No Reads
droEle1
AGAATCGGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AGAA-------------------------------CAAA--A---ACAGT-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA---------CATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------GGCAACAACCGGC-----GGCA-ACC------------ATAACAA---C---AA-----------------------------------GGTGGCGGTCAC--T----------------TGAA--------AAACTA-------------------ACT----A-AAAT--GCATTGC--SizeHit CountTotal NormTotal
No Reads
droRho1
AGAATCGGAAACCGAATGGTCCCGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AGAA-------------------------------CAAA--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------GGCAACAACCAGC-----GGCA-ACC------------A-------------AAAGTCTACA---ACAA-------TAACA-------TGGTGGCGGTCAC--T----------------TGAA--------AAACTA-------------------ACT----A-AAGT--GCATTGC--SizeHit CountTotal NormTotal
No Reads
droBia1
AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---ACAA-------------------------------CAGA--A---ACAAC-CGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAACA-CCACAACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAACCATC-----GGCA-GCC------------ATAGCAA---C---AAGGTCTACG---ATAA-------TAACA-------CGGTGGCGGTC----T----------------TAG---------AAACGA-------------------ACT----A--AAT--GCATTAC--SizeHit CountTotal NormTotal
No Reads
droTak1
AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCAAC---ACAA-------------------------------CAGC--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ATTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGCCAGC-----GGCA-AACTAAAC---A---ACAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGCGGTCTC--T----------------TGAAA-ACT-AAAGACTA-------------------ACA----A-CAAT--GCATTAC--SizeHit CountTotal NormTotal
No Reads
droEug1
AGAATCGGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---ACAG-------------------------------CAGA--A---ACAAC-TGAA---ACTTCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-AATAGTA--------------A-----------------------------------AC---ATC--------------------AACTACAACTAGC-----GGCA-ACT------------ATAACAA---C---AAAGTCTACA---ATAA-------TAACA-------TGGTGGAGGTCTC--T----------------TTACA-AATGAAAGACTT-------------------ACT----A-AAAT--GCATTAC--SizeHit CountTotal NormTotal
No Reads
dm3
AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCAGAGAAGGTAATGAACTAATCACC---AG-------------------CATCATCACAACAGCAGA--A---ACAAC-TGAA---ACATCTTCGCCGAAACAAA-----------------------------CCTACGATAAC------AACATCTAAATTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAGT-----CGCA-AGC------------ATAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGAAGGCGTC--T----------------TAAAA-ACTAAACAACTA-------------------ACT----A-AAGT--GCATTGTGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................AACAGTCAGT-----CGCA-AGC------------ATAACAA---C---.................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AA-------TAACA-------TGGTGAAGGCGTC--T----------------T............................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AA-ACTAAACAACTA-------------------ACT----A-AA.............2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TAACA-------TGGTGAAGGCGTC--T----------------TA...........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGAAGGCGTC--T----------------TAA..........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000001000000000000000000
..........................................................AGAGAAGGTAATGAACTAATC....................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AACATCTAAATTAGTA--------------A-----------------------------------AC---ATC--------------------AGC..................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGCCCTGGCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................C---ATC--------------------AGCAACAGTCAGT-----CG.................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCAACAGTCAGT-----CGCA-AGC------------...............................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................A-----------------------------------AC---ATC--------------------AGCAACAGTCAGT-----CG.................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CA-------TGGTGAAGGCGTC--T----------------TAAA.........................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAG.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............ATGGCCCTGGCG---GTGGTTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................A-------TGGTGAAGGCGTC--T----------------TAAAA-ACTAAAC................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................G---GTGGTTCGGAGCAGCAG---------CCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................CG---GTGGTTCGGAGCAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................CG---GTGGTTCGGAGCAGCAG---------CCAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................G---GTGGTTCGGAGCAGCAG---------CCAGAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TACA---ATAA-------TAACA-------TGGTGAAGGCGTC--T----------------T............................................................2812.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGCCCTGGCG---GTGGTTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................G---GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................A-------TAACA-------TGGTGAAGGCGA.................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................A-------TGGTGAAGGCGTC--T----------------TAAAA-ACT....................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCCTGGCG---GTGGTTCGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGAAGGCGTC--..............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGGAGCAGCAG---------CCAGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGCA-AGC------------ATAACAA---C---AAG..............................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGAAG.....................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CAAC-TGAA---ACATCTTCGCCGA.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CG---GTGGTTCGGAGCAGCAG---------...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TACA---ATAA-------TAACA-------TGGTGAAGGCGTC--..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATGGCCCTGGCG---GTGGTTCGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCTGGCG---GTGGTTCGGAGCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAACTA-------------------ACT----A-AAGT--GCATTG...2411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................A-----------------------------------AC---ATC--------------------AGCAACAGTCAGT-----CGC................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............AAATGGCCCTGGCG---GTGGTTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCAACAGTCAGT-----CGCA-AGC------------A..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCTGGCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AGGTAATGAACTAATCACC---A.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TCGGAGCAGCAG---------CCAGAGAAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCCCTGGCG---GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTCGGAGCAGCAG---------CCAGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................ACC---AG-------------------CATCATCACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTGGTTCGGAGCAGCAG---------CCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAAGGCGTC--T----------------TAAAA-AC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................GGCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................CAGT-----CGCA-AGC------------ATAACAA---C---.................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ACA-------TGGTGAAGGCGTC--T----------------TAAAA-ACT....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............AAATGGCCCTGGCG---GTGGTTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................C---AG-------------------CATCATCACAACAGCAGA--A---AC...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAATGGCCCTGGCG---GTGGTTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................ATCATCACAACAGCAGA--A---A................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CA---ATAA-------TAACA-------TGGTGAA......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAATGGCCCTGGCG---GTGGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AC-TGAA---ACATCTTCGCCGAAACA...................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAGTCAGT-----CGCA-AGC------------ATAACAA---.....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CAACAGCAGA--A---ACAAC-TGAA---A...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTCGGAGCAGCAG---------CCAGAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............AAATGGCCCTGGCG---GTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................GCG---GTGGTTCGGAGCAGCAG---------CCAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAGT-----CG.................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................A---ATAA-------TAACA-------TGGTGAAGGCG..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCG---GTGGTTCGGAGCAGCAG---------...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATAA-------TAACA-------TGGTGAAGGCGTC--..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AA-------TAACA-------TGGTGAAGGCGTC--..............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TCTAAATTAGTA--------------A-----------------------------------AC---ATC--------------------AGC..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCAAATGGCCCTGGCG---GTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATAA-------TAACA-------TGGTGAAGGCGT.................................................................................2111.0010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................A-------TAACA-------TGGTGAAGGCGTC--T----------------T............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGCGTC--T----------------TAAAA-A......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCTGGCG---GTGGTTCGGAGCAGCAG---------CCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AATCACC---AG-------------------CATCATCACAACAGC..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCAAATGGCCCTGGCG---GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAACCAAATGGCCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................A---ATAA-------TAACA-------TGGTGAAGGCGTC--T----------------T............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTCGGAGCAGCAG---------CCAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAACCAAATGGCCCTGGCG---GTGGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................TGGCCCTGGCG---GTGGTTCGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................CCCTGGCG---GTGGTTCGGAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AACCAAATGGCCCTGGCG---GTGGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................G---GTGGTTCGGAGCAGCAG---------CCAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................GTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCA..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................TGGTTCGGAGCAGCAG---------CCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................C---AAGGTCTACA---ATAA-------TAACA-------T............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AACCAAATGGCCCTGGCG---GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGCCCTGGCG---GTGGTTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGGTCTACA---ATAA-------TAACA-------TGG..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCCTGGCG---GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCA-AGC------------ATAACAA---C---AAGGT............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
AGA---GGAAACCAAATGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCG---GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AGT-----CGCA-AGC------------ATAACAA---C---AAG..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................A-------TGGTGAAGGCGTC--T----------------TAAAA-A......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCCTGGCG---GTGGTTCGGAGCAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGGAGCAGCAG---------CCAGAGAAGGTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................CTGGCG---GTGGTTCGGAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ACA---ATAA-------TAACA-------TGGTGAAGG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CGCA-AGC------------ATAACAA---C---AAGGTC...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GCAGCAG---------CCAGAGAAGGTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AC---ATC--------------------AGCAACAGTCAGT-----CG.................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................GCCCTGGCG---GTGGTTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
AGA---GGAAACCAAATGGCCCTGGCG---G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CA-------TGGTGAAGGCGTC--T----------------TAAAA-ACTA...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AGAGAAGGTAATGAACTAATCACC---A.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGAAGGCGTC--T----------------T............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TACA---ATAA-------TAACA-------TGGTGA.......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGCG---GTGGTTCGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TCACC---AG-------------------CATCATCACAACAG...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AG-------------------CACCACCACGACAGCAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------AACATCTAAACTAGTA--------------A-----------------------------------AC---ATC------------------ACAGCAACAGTCAGC-----GGCA-AGC------------CTAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGAGGCGTC--T----------------TGAAA-ACCGAACAACTA-------------------ACT----A-AAGT--GCATTGC--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................CCTGGCG---GTGGTTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
..............AATGGCCCTGGCG---GTGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
..................................................................................................................................................................................................ACGATAAC------AACATCTAAACTAGTA--------------.....................................................................................................................................................................................................................................................2411.00100010000000000000
......................................................................................................................................................................................................................TAAACTAGTA--------------A-----------------------------------AC---ATC------------------ACAGC..................................................................................................................................................................................2111.00100000100000000000
...................................................................................................................................................CTTCGCCAAAACAAA-----------------------------ACTACGAT............................................................................................................................................................................................................................................................................................2311.00100010000000000000
AGA---GGAAACCAAATGGCCCTGGCG---GTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
......................TGGCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
..............AATGGCCCTGGCG---GTGGTTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..................................................................................................................................................TCTTCGCCAAAACAAA-----------------------------ACTAC...............................................................................................................................................................................................................................................................................................2111.00100000100000000000
................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCGTC--T----------------TGA..........................................................2511.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCGTC--T----------------TGAA.........................................................2611.00100000000000010000
...................................................................................................................................................................................................................................................................................C---ATC------------------ACAGCAACAGTCAGC-----GG.................................................................................................................................................................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................A-------TGGTGGAGGCGTC--T----------------TGAAA-ACCGA..................................................2511.00100010000000000000
......................................................................................................................................................................................................................................................................................................................TCAGC-----GGCA-AGC------------CTAACAA---C---AAGGTC...........................................................................................................................2611.00100000000001000000
.......................................................................AACTAATCACC---AG-------------------CACCACCAC................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................TACA---ATAA-------TAACA-------TGGTGGAGGCGTC--T----------------.............................................................2711.00100000001000000000
............................................................................................................CCACCACGACAGCAGA--A---AC...............................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
AGA---GGAAACCAAATGGCCCTGGCG---GTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
..............................................................................................................ACCACGACAGCAGA--A---ACAAC-TGAA---AC..................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
................................GGTTCGGAGCAGCAG---------CCACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................................................................................................................................AACAGTCAGC-----GGCA-AGC------------CTAACAA---C---A................................................................................................................................2611.00100000000001000000
droSec2
AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACC---AG-------------------CACCACCACGACAGCAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------AACATCTAAACTAGTA--------------A-----------------------------------AC---ATC------------------ACAGCAACAGTCAGC-----GGCA-AGA------------CTAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGAGGCGTC--T----------------TGAAA-ACTGAACAACTA-------------------ACT----A-AAGT--GCATAGC--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................A-------TAACA-------TGGTGGAGGCGTC--T----------------TGAAA-A......................................................2611.0010010
.................................GTTCGGAGCAGCAG---------CCACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGGAGGCGTC--T----------------TGAAA-AC.....................................................2511.0010100
.................................................................................................................................................................................................................................................................................................................................................................................AA-------TAACA-------TGGTGGAGGCGTC--T----------------.............................................................2111.0010100
.........................CG---GTGGTTCGGAGCAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.............AAATGGCCCTGGCG---GTGGTTCGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.......................................................................................................................................................................................................................................................................................................................................................................CTACA---ATAA-------TAACA-------TGGTGGAGGC...................................................................................2411.0010010
.......................................................................................................................................................................................................................................................................................ATC------------------ACAGCAACAGTCAGC-----GGCA-AGA------------CT.............................................................................................................................................2711.0010010
.....................................................................................................................................................................................................................................................................................................................GTCAGC-----GGCA-AGA------------CTAACAA---C---AAGGT............................................................................................................................2611.0010010
.....................CTGGCG---GTGGTTCGGAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCG..................................................................................1911.0010010
.................................................................................................................................................................................................................................................................................................................................GCA-AGA------------CTAACAA---C---AAGGT............................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................ACA---ATAA-------TAACA-------TGGTGGAGG....................................................................................2111.0011000
.....................................................................................................................................AC-TGAA---ACATCTTCGCCAA.......................................................................................................................................................................................................................................................................................................................................1911.0011000
..........................G---GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGCGTC--T----------------TGAAA-ACTG...................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................................................................................ATAA-------TAACA-------TGGTGGAGGC...................................................................................1911.0010010
..............................GTGGTTCGGAGCAGCAG---------CCACAGCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
.....................................................................................................................................................................................................ATAAC------AACATCTAAACTAGTA--------------.....................................................................................................................................................................................................................................................2111.0010010
droYak3
AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCAGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACCACCACGA-------------------------------CAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAGC-----GGCATACC------------ATAACAA---C---AAGGTCTACA---ATAA-------TAACA-------TGGTGGAGGCCTT--T----------------TGAAA-ACTGAAAAACTA-------------------ACT----A-AAGT--GCATTAC--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................GTCAGC-----GGCATACC------------ATAACAA---C---AAGGT............................................................................................................................2712.00202000000000
..............................................................................................................................................................................................................................................A-----------------------------------AC---ATC--------------------AGCAACAGTCAGC-----GGC................................................................................................................................................................2211.00100000010000
...........................................................................AATCACCACCACGA-------------------------------CAGA--A---A................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................................................................................................C---ATC--------------------AGCAACAGTCAGC-----GGC................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCCTT--T----------------TGAAA-ACTGAAAAAC.............................................2511.00110000000000
...................................................................................................................................................................................................................................................................................C---ATC--------------------AGCAACAGTCAGC-----GGCA...............................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGGAGGCCTT--T----------------TGAAA-ACTG...................................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-ACTGAAAAACTA-------------------ACT----A-AA.............2111.00100100000000
.................................GTTCAGAGCAGCAG---------CCACAGCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................AGC-----GGCATACC------------ATAACAA---C---AAGGTCTAC........................................................................................................................2811.00101000000000
............................................................AGCAGGTAATGAACTAATCACCACC..............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
................................GGTTCAGAGCAGCAG---------CCACAGCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................TCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGT............................................................................................................................................................................2611.00101000000000
...............................................................................................................................................................AAA-----------------------------ACTACGATAAC------AACATC.............................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCCT.................................................................................2011.00100010000000
..........................................AGCAG---------CCACAGCAGGTAATGAACTAATC....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
............CAAATGGCCCTGGCG---GTGGTTCAGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................TACA---ATAA-------TAACA-------TGGTGGAGGC...................................................................................2311.00100100000000
.......................................................................................................................................................................................................................................................................................ATC--------------------AGCAACAGTCAGC-----GGC................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................................................................................................................................................................GTCAGC-----GGCATACC------------ATAACAA---C---.................................................................................................................................2211.00101000000000
............CAAATGGCCCTGGCG---GTGGTTCAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
....................................CAGAGCAGCAG---------CCACAGCAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
droEre2
AGA---GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAGCAG---------CCACAGCAGGTAATGAACTAATCACCAGCACGA-------------------------------CAGA--A---ACAAC-TGAA---ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAAC-----GGCA-ACC------------ATAACAA---C---AAGGTCTA-------------------------------------------------------------------------AACTA-------------------AC-----A-AAGT--GCATTAC--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............ATGGCCCTGGCG---GTGGTTCGGAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................28154.005400000054
..............AATGGCCCTGGCG---GTGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..........................G---GTGGTTCGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......GAAACCAAATGGCCCTGGCG---GTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...............ATGGCCCTGGCG---GTGGTTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................CTGGCG---GTGGTTCGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
........................................................................ACTAATCACCAGCACGA-------------------------------CAGA--A---A................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
.......................................................................................................................................................................................................................................................................................ATC--------------------AGCAACAGTCAAC-----GGC................................................................................................................................................................1911.0010100000
..............................................................................................................................A---ACAAC-TGAA---ACATCTTCGCG.........................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................TA--------------A-----------------------------------AC---ATC--------------------AGCAACAGTCAAC-----...................................................................................................................................................................2111.0010001000
.................GGCCCTGGCG---GTGGTTCGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................A-----------------------------------AC---ATC--------------------AGCAACAGTCAAC-----GGCA-ACC------------AT.............................................................................................................................................2811.0011000000
...................................................................AATGAACTAATCACCAGCACG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
............................................................AGCAGGTAATGAACTAATCACCACTG.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000
........................................................................................................................................................................................................AC------AACATCTA-ACTAGTA--------------A-----------------------------------AC---ATC--------------------A....................................................................................................................................................................................2411.0010001000
...........................................................................AATCACCAGCACGA-------------------------------CAGA--.....................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
..........ACCAAATGGCCCTGGCG---GTGGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
.......................................................................................................................................................................................................................................................................................ATC--------------------AGCAACAGTCAAC-----GGCA-..............................................................................................................................................................2011.0010000010
..................GCCCTGGCG---GTGGTTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..............................................................................................................................................................................................................................................................................................................AGCAACAGTCAAC-----GGCA-ACC------------AT.............................................................................................................................................2211.0010001000
dp5
AGAATCGGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAGCCACAGCAGGTAATGAACTAATCACC---AC----------------------------------TGA--C---ACAAATAGAA-----AACATCGCCAAAGCAAC-------------------------------------------------ATCCA-ACC---GTAACAACAAAAAAGAAC---AACCA--CTAATC---------------------------------------------AGCA--TGGCGGC-----GGCA-ACA------------ACAACAG---C---AAGAAATA----------------CTACT-------TGGTGTCGGCAAC--A----------------TAGAA-ATAGAAACACTC-------------------CC-------------------A--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................CTACT-------TGGTGTCGGCAAC--A----------------TA...........................................................2112.0020200000000
............CGAATGGTCCTGGCG---GTGGTCTGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.GAATCGGAAGCCGAATGGTCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
......................................................................GAACTAATCACC---AC----------------------------------TGA--C---ACA..............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....CGGAAGCCGAATGGTCCTGGCG---GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................GCAGCAGCAGCAGCCACAGCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................CAACAG---C---AAGAAATA----------------CTACT-------TGGT.........................................................................................2411.0010010000000
.......GAAGCCGAATGGTCCTGGCG---GTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
.............................................................................................................................................................................................................................................................AATC---------------------------------------------AGCA--TGGCGGC-----GGCA-AC............................................................................................................................................................2111.0010010000000
....................................................................................................................................................................................................................................AACAAAAAAGAAC---AACCA--CTA.....................................................................................................................................................................................................................................2111.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................AATA----------------CTACT-------TGGTGTCGG....................................................................................1811.0010100000000
..........GCCGAATGGTCCTGGCG---GTGGTCTGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
..............AATGGTCCTGGCG---GTGGTCTGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
......................TGGCG---GTGGTCTGGAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
..............................................................................................................................................................CAAC-------------------------------------------------ATCCA-ACC---GTAACAACAAAAAAG.....................................................................................................................................................................................................................................................2711.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................AGAAATA----------------CTACT-------TGGTGTC......................................................................................1911.0010100000000
...ATCGGAAGCCGAATGGTCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000000
...........................................................................................................................................................................................................................................................CTAATC---------------------------------------------AGCA--TGGCGGC-----GGCA-..............................................................................................................................................................2111.0010100000000
.........................................................................................................................................GAA-----AACATCGCCAAAGCAAC-------------------------------------------------ATCCA-AC........................................................................................................................................................................................................................................................................2711.0010010000000
.............GAATGGTCCTGGCG---GTGGTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
............................................................................ATCACC---AC----------------------------------TGA--C---ACAAATAGAA-----..................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
........................GCG---GTGGTCTGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.0010000000100
.................................GTCTGGAGCAGCAGCAGCAGCAGCCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.....CGGAAGCCGAATGGTCCTGGCG---GTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................GGCG---GTGGTCTGGAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..............................................................................................................................................................................................................................................................ATC---------------------------------------------AGCA--TGGCGGC-----GGCA-A.............................................................................................................................................................1911.0010010000000
............................................................................................................................................................................................................................................................TAATC---------------------------------------------AGCA--TGGCGGC-----GGCA-..............................................................................................................................................................2011.0010100000000
................TGGTCCTGGCG---GTGGTCTGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................AATA----------------CTACT-------TGGTGTCGGCAAC--..............................................................................2211.0010100000000
.........................CG---GTGGTCTGGAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
AGAATCGGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAGCCACAGCAGGTAATGAACTAATCACC---AC----------------------------------TGA--C---ACAAATAGAA-----AACATCGCCAAAGCAAC-------------------------------------------------ATCCA-ACC---GTAACAACAAAAAAGAAC---AACCA--CTAATC---------------------------------------------AGCA-----TGGC-----GGCA-GCA------------A---CAA---C---AACAGCAACA---AATA-------CTACT-------TGGTGTCGGCAAC--A----------------TAGAA-ATAGAAACACTC-------------------CC-------------------A--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...ATCGGAAGCCGAATGGTCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.007700000
...............................................................................................................................................................................................................................................................................................................................................................................AATA-------CTACT-------TGGTGTCGGC...................................................................................1914.004400000
.................GGTCCTGGCG---GTGGTCTGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
.................................................................GTAATGAACTAATCACC---AC----------------------------------T.........................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.............................................................................................................................................................................................................................................................................................................................................................................................CT-------TGGTGTCGGCAAC--A----------------TAGAA-AT.....................................................2313.003300000
................................................................................................................................................................................................................................................................................................................................................................................ATA-------CTACT-------TGGTGTCGGC...................................................................................1813.003300000
...............................................................................................................................................................................................................................................................................................................................................................................AATA-------CTACT-------TGGTGTCGGCAAC--..............................................................................2213.003300000
..................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA---AATA-------CTACT-------TGGTGTCGGC...................................................................................2913.003300000
..........................................................................................................................................................................................................................................................................................................................................................................CA---AATA-------CTACT-------TGGTGTCGGC...................................................................................2112.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................CTACT-------TGGTGTCGGCAAC--A----------------TAGAA-.......................................................2412.002200000
.................................................................................................................................................................................................................................................................................................................................................................................TA-------CTACT-------TGGTGTCGGCA..................................................................................1812.002200000
................................................................................................................................................................................................................................................C---AACCA--CTAATC---------------------------------------------AGCA-----TGGC-----GGCA-GC............................................................................................................................................................2611.001001000
...................................................................................................................................................................................................................................CAACAAAAAAGAAC---AACCA--CT......................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................AACA---AATA-------CTACT-------TGGTGTCGGC...................................................................................2311.001100000
.......................................................................................................................................................................................................................................................CA--CTAATC---------------------------------------------AGCA-----TGGC-----GGCA-G.............................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AATA-------CTACT-------TGGTGTCGGCAAC--A----------------TAGAG-.......................................................2811.001100000
............................................................................................................................................................................................................................................AGAAC---AACCA--CTAATC---------------------------------------------AGCA-----T...........................................................................................................................................................................2111.001001000
.......................................................................................................................................TAGAA-----AACATCGCCAAAGC....................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................ACA---AATA-------CTACT-------TGGTGTCGGC...................................................................................2211.001100000
.......................................................................................................................................................................................................................................................................................................................................................................CAACA---AATA-------CTACT-------TGGTGTCGGCAAC--..............................................................................2711.001010000
..............................GTGGTCTGGAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..................................................................................................................................................................................................................................................................................................................................................................................A-------CTACT-------TGGTGTCGGCAAC--A----------------T............................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................ATA-------CTACT-------TGGTGTCGGCAAC--A----------------TAGA.........................................................2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA---AATA-------CTACT-------TGGTGTCGGC...................................................................................2811.001100000
...ATCGGAAGCCGAATGGTCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............GAATGGTCCTGGCG---GTGGTCTGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.................................................................................C---AC----------------------------------TGA--C---ACAAATAGAA-----AACATCGCC.........................................................................................................................................................................................................................................................................................................................................2611.001100000
.............GAATGGTCCTGGCG---GTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................................................................................................................................................................................................................A---AATA-------CTACT-------TGGTGTCGGCAAC--A----------------TAGAA-.......................................................2911.001100000
............................................................................................................................................................AGCAAC-------------------------------------------------ATCCA-ACC---GTAACAACA...........................................................................................................................................................................................................................................................2311.001010000
droWil2
CGAATCGGAAACCAAATGGCCCTGGTG---GTGGTTTGGAGCAGCAG---------CCACAGCAGGTAATCAACTAAAAACC---AAA-------------------ACCAGCCATC------A--AGCTACAAC-AACAACAACAATTTAACAACAAC--A-----------------------------ACCACGATAGC------AACAA-TA-AC----------------------------CA--CTA-TCAGCATATAGAGAAGTGC--------AGCGC---------------GGTAAAAG-CAGC-----GGCA----------------GTAACAA---C---AACATCTACA---ACAACAAACATCAACA-------TGGTGGCGGCAACACTAACAACAAATATAAACTAAA--------AAAACA-ACTA-----AAACCACTAACT----AAAGATGCGCATTAG-GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGT...................................................................................................................................................................................................................1812.00200020
......................TGGTG---GTGGTTTGGAGCAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200011
..............................................................................................................................................................................................................................................................................GTGC--------AGCGC---------------GGTAAAAG-CAGC-----GGCA----------------...............................................................................................................................................2512.00200110
.........................................................................................................................................................................................................................................................................GAGAAGTGC--------AGCGC---------------GGTAAAAG-CAGC-----...................................................................................................................................................................2611.00100010
..........................................................................................................................................................................................................................C----------------------------CA--CTA-TCAGCATATAGAGAAGTGC--------A........................................................................................................................................................................................................2611.00100010
................................................................................................................................................CAATTTAACAACAAC--A-----------------------------ACCACGAT............................................................................................................................................................................................................................................................................................2411.00100010
.................................GTTTGGAGCAGCAG---------CCACA......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...............................................................................................................................................................................................................................................................................TGC--------AGCGC---------------GGTAAAAG-CAGC-----GGCA----------------...............................................................................................................................................2411.00100100
.................................................................................................................................................................................................................................................................................................................AAAAG-CAGC-----GGCA----------------GTAACAA---C---AAC..............................................................................................................................2411.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................CAACA-------TGGTGGCGGCAACACTAACAAC.......................................................................2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................TCTACA---ACAACAAACATCAACA-------TGGTGG.......................................................................................2811.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................CAACA-------TGGTGGCGGCAACAC..............................................................................2011.00100010
.........................................................................................................................................................................................................................AC----------------------------CA--CTA-TCAGCATATAGAGAAG....................................................................................................................................................................................................................2311.00101000
........................................................................................................................................................................................................................................................A--CTA-TCAGCATATAGAGAAG....................................................................................................................................................................................................................2011.00100010
CGAATCGGAAACCAAATGGCCCTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
................TGGCCCTGGTG---GTGGTTTGGAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
....................................................................................................................................................................................................................................................................ATATAGAGAAGTGC--------AGCGC---------------GGT..................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................................................................................................................AGCGC---------------GGTAAAAG-CAGC-----GGC................................................................................................................................................................2011.00100010
....................................................................................................................................................TTAACAACAAC--A-----------------------------ACCACGATA...........................................................................................................................................................................................................................................................................................2111.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTAACT----AAAGATGCGCA......1911.00100010
................................................................................................................................................................................................................................................................CAGCATATAGAGAAGTGC--------.........................................................................................................................................................................................................1811.00100010
...................................TTGGAGCAGCAG---------CCACAGCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA-----AAACCACTAACT----AAAGATGC.........2311.00100010
.............................................................................................................................................................................................................................................................................AGTGC--------AGCGC---------------GGTAAAAG-CAGC-----GGC................................................................................................................................................................2511.00100010
.....................CTGGTG---GTGGTTTGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.................................................................................................................................................................................................................................................................................................................AAAAG-CAGC-----GGCA----------------GTAACAA---C---.................................................................................................................................2111.00100010
............................................................................................................................................................................................................................................................................AAGTGC--------AGCGC---------------GGTAAAAG-CAGC-----...................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACTAACT----AAAGATGCGC.......2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----AAACCACTAACT----AAAGATGCGCATTA...2811.00100010
.....CGGAAACCAAATGGCCCTGGTG---GTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.......................GGTG---GTGGTTTGGAGCAGCAG---------...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.............................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGTG..................................................................................................................................................................................................................1911.00100010
.................................GTTTGGAGCAGCAG---------CCACAGCAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................CATCAACA-------TGGTGGCGGCAACACT.............................................................................2411.00100010
.............................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGTGC--------.........................................................................................................................................................................................................2011.00100010
..........................................................................................................................................................ACAAC--A-----------------------------ACCACGATAGC------AACAA-T............................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................CAATTTAACAACAAC--A-----------------------------ACCACGATAGC------A..................................................................................................................................................................................................................................................................................2811.00100010
.............................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGTGC--------A........................................................................................................................................................................................................2111.00100010
......................TGGTG---GTGGTTTGGAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................................................................................................................GC--------AGCGC---------------GGTAAAAG-CAGC-----GGCA----------------...............................................................................................................................................2311.00100100
..............................................................................................................................................................................................................................................................................................................GGTAAAAG-CAGC-----GGCA----------------GTAACAA---C---AAC..............................................................................................................................2711.00100010
..................................................................................................................................................................................................................CAA-TA-AC----------------------------CA--CTA-TCAGCA..............................................................................................................................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................GC--------AGCGC---------------GGTAAAAG-CAGC-----...................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----AAACCACTAACT----AAAGATGCGC.......2311.00100010
.................................................................................................................................................................................................................................................................................................................AAAAG-CAGC-----GGCA----------------GTAACAA---.....................................................................................................................................2011.00100010
....................................................................................................................................................................................................................................................................................................................................................................................AAACATCAACA-------TGGTGGCGGC...................................................................................2111.00100010
........................................................................ACTAAAAACC---AAA-------------------ACCAGCCATC------........................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..............................................................................................................................................................................................................................................................................................................GGTAAAAG-CAGC-----GGCA----------------GT.............................................................................................................................................1811.00100010
.....................CTGGTG---GTGGTTTGGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............................................................................................................................................................................................................................................................................GTGC--------AGCGC---------------GGTAAAAG-CAGC-----GGC................................................................................................................................................................2411.00100010
.................................................................................................................................................................A-----------------------------ACCACGATAGC------AACAA-T............................................................................................................................................................................................................................................................................1811.00100010
......................................................................................................................................................................................................................................................................ATAGAGAAGTGC--------AGCGC---------------GG...................................................................................................................................................................................1911.00100100
........................GTG---GTGGTTTGGAGCAGCAG---------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................GTGGTTTGGAGCAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............................TGGTTTGGAGCAGCAG---------CC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................................................................................AAAAG-CAGC-----GGCA----------------GTAACAA---C---AACA.............................................................................................................................2511.00100100
...................................TTGGAGCAGCAG---------CCACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010
....................................................................................................................C------A--AGCTACAAC-AACAACAACA.................................................................................................................................................................................................................................................................................................................................................2130.33100010
droVir3
AGAATCGTAAACCCAATGGACCTGGCGGCGGCGGCATGGAGCAGCAG---------TCACAGCAGGTAATGAACTAAAAGCC---AAA----------------------------------CA--A---ACAAACAAAA-----AA---------AGAAAA--------------ACAAACAAACATACACCGACGATAACAAGCACATCATCA-------------------------------------------------------------------AGAACAACAACATCTTTAACAACAACAACTAGCAGCACTGCA-AGA---AC---AACAA---AAA---C---AATAACTATAACAACAA-------GAACATGGCTTTCGGTGGCGGCAAC--T----------------A----------CAAACTA-------------------ACG----A-AAAT--GCATTAA--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................TGGCGGCGGCGGCATGGAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000000000000000000000000000000000000000000000010
...................................ATGGAGCAGCAG---------TCACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000010000000000000000000000000000000000010
.........AACCCAATGGACCTGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000001000000000000000000000000000000000000000000000000000
...................ACCTGGCGGCGGCGGCATGGAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
................TGGACCTGGCGGCGGCGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
......................TGGCGGCGGCGGCATGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................GGACCTGGCGGCGGCGGCATGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000010000000000000000000000000000000000000000000000000000
..........ACCCAATGGACCTGGCGGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CTATAACAACAA-------GAACATGGCTTT.............................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................ACCGACGATAACAAGCACATC................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................................GATAACAAGCACATCATCA-------------------------------------------------------------------AGA......................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAAACATACACCGACGATAACAAGCACAT.................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GAAAA--------------ACAAACAAACATACACCGACG..............................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CAACAA-------GAACATGGCTTTCGGTGGCGG....................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTTAACAACAACAACTAGC........................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................AATGAACTAAAAGCC---AAA----------------------------------CA--A---AC...............................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CAACATCTTTAACAACAACAA.............................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CGACGATAACAAGCACATC................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................AGCACTGCA-AGA---AC---AACAA---AAA---C---.................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CATCTTTAACAACAACAACTAGC........................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACTAGCAGCACTGCA-AGA---AC---A..................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..........................................................ACAGCAGGTAATGAACTAAAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ATCTTTAACAACAACAACTA..........................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...............ATGGACCTGGCGGCGGCGGCATGGAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AA-------GAACATGGCTTTCGGT.........................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CATGGCTTTCGGTGGCGGC...................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
................................GGCATGGAGCAGCAG---------TCACAGCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CTGCA-AGA---AC---AACAA---AAA---C---A................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................TGGACCTGGCGGCGGCGGCATGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................ATAACAAGCACATCATCA-------------------------------------------------------------------AG.......................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CATGGCTTTCGGTGGCGGCAAC--T----------------A----------..................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............AATGGACCTGGCGGCGGCGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................CTGGCGGCGGCGGCATGGAGCAGCAG---------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CACATCATCA-------------------------------------------------------------------AGAACAACA................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................ACAAACATACACCGACGATA...........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
......................................GAGCAGCAG---------TCACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000100000000000000000000000000000000000000000000000000000000
....................................TGGAGCAGCAG---------TCACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
....................................................................ATGAACTAAAAGCC---AAA----------------------------------C........................................................................................................................................................................................................................................................................................................................................................................1870.141010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AACAACAACAACTAGCAGG.....................................................................................................................................................................19170.061000000000001000000000000000000000000000000000000000000000000000
droMoj3
AAAATCGTAAGCCCAATGGACCTGGCGGCGGTGGCATGGAACAACAG---------TCACAGCAGGTAATGAACTAAAAGCC---AAA-------------------AGCA-------------------------------------------------A-----------------------ACAAACACCAACGATAACAACCACAACATC-------ATC--------AACAACAACAACTACTACT-----------------------AC---ATC--------------------TTTAACAACAAGCAGTACTGCA-AAA---AC---AACAATAATAA---C---AACATCAACA---ACAA-------CAGGGTGGCTTTCGGTGGCGGCAAC--T----------------A----------CAAACTA-ACGAG---------------A----A-TAAT--ACATTA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................TACTACT-----------------------AC---ATC--------------------TTTAACAACA...........................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................ATCAACA---ACAA-------CAGGGTGGCT...............................................................................................2111.001100000
...............................................................................................................................................................................................................................C--------AACAACAACAACTACTACT-----------------------AC---ATC--------------------TTT..................................................................................................................................................................................2811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................GGCAAC--T----------------A----------CAAACTA-ACGAG---------------A----.................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................AACA---ACAA-------CAGGGTGGCTTTCGGTG........................................................................................2511.001100000
......................................................................................................................................................................................................TAACAACCACAACATC-------ATC--------AAC........................................................................................................................................................................................................................................................2211.001100000
........................................................TCACAGCAGGTAATGAACTAAAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................GACCTGGCGGCGGTGGCATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................ACAACAG---------TCACAGCAGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGGCGGCAAC--T----------------A----------CAAACT............................................2311.001100000
........................................ACAACAG---------TCACAGCAGGTAATGAACT........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................ACAGCAGGTAATGAACTAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................AAA-------------------AGCA-------------------------------------------------A-----------------------ACAAACACCAAC...............................................................................................................................................................................................................................................................................................2011.001100000
...........................................................CAGCAGGTAATGAACTAAAAGCC---..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...ATCGTAAGCCCAATGGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.AAATCGTAAGCCCAATGGACCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................AATAA---C---AACATCAACA---ACAA-------C........................................................................................................2180.131100000
droGri2
AGAATCGTAAGCCCAATGGACCTGGAG---GTGGCATGGAGCAGCAG---------CCACAGCAGGTAATCAACTAGAAGCC---AAACCAAAAACAAATCACCAACCCGTT-------------------------------------------------A-----------------------------ACAACAAAAAC------AACAACCA-AT-------------------------------------------------------ACATCATC--------------------AACAACAACTAGCAGCCCTGCA-ACA---AC---AACAATA------------------------ATAA-------CAACTTGGCTTTCGGTGGCGGCAAA----------------------CA-ACACAAAAACTA-ACGA----------------A----A-AAAC--GCATTGA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGCTTTCGGTGGCGGCAAA----------------------CA-.......................................................2711.00110
...............ATGGACCTGGAG---GTGGCATGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101

Generated: 05/18/2015 at 05:14 AM