ID:

dan_2711

 Coordinate:

scaffold_13337:18182653-18182803 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.8 -6.5 -6.5 -6.5

Flybase annnotation

exon [dana_GLEANR_10730:2]; CDS [Dana\GF10772-cds]; intron [Dana\GF10772-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAAAAAAATATGTGAAATGAGAGTTCTTTACTTTTGAATTGTTTTTAAATTATTTTTTGAGAAAACTGCTGAGCATAGTAATATTCAATCAATATAAGTCTATATATTTATTATTTTAATGAAGTCTACAGTGAGAGACTTTGCTGATTAAATTATTCACCAAATTAATTCAATGGCTTTGTTTTTTTTTTTAATTTTTAGACAAACGAAGAGGGCGAGGGTAATGCCGAGGATGAGCCCATCATCAATGG
********************************************************...((............(((.(((...((((......((((((......))))))........))))...))).))).....))*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 M044
female body
 V106
head
 V055
head
 M058
embryo
TAAAAAAATATGTGAAATGAGAGTTCTT............................................................................................................................................................................................................................... 28 0 1 6.00 6 6 0 0 0 0
...............................................................................................................................................................................................TAATTTTTAGACAAACGAAGAGGGC................................... 25 0 1 4.00 4 4 0 0 0 0
TAAAAAAATATGTGAAATGAGAGTTC................................................................................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0
TAAAAAAATATGTGAAATGAGAGTTCT................................................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0
........................................................TTGAGAAAACTGCTGAGCATAGTAATA........................................................................................................................................................................ 27 0 1 2.00 2 1 1 0 0 0
.................................................TTATTTTTTGAGAAAACTGCTGAGCA................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................................TTAGACAAACGAAGAGGGCGAGGG.............................. 24 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................TTTAATTTTTAGACAAACGAAGAGGGC................................... 27 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................TTTAGACAAACGAAGAGGGCGAGG............................... 24 0 1 2.00 2 1 0 0 1 0
....................................................................CTGAGCATAGTAATATTCAATCAATA............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................TTAGACAAACGAAGAGGGCGAGGGTA............................ 26 0 1 1.00 1 0 0 1 0 0
...............AATGAGAGTTCTTTACTTTTGAATTGT................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................GAGGGCGAGGGTAATGCCGAGG................... 22 0 1 1.00 1 0 1 0 0 0
TAAAAAAATATGTGAAATGATAGTTCTT............................................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................CGAAGAGGGCGAGGGTAA........................... 18 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................GGCGAGGGTAATGCCGAGGATG................ 22 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................GCGAGGGTAATGCCGAGGATGA............... 22 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................................TGCCGAGGATGAGCCCATC........ 19 0 1 1.00 1 0 1 0 0 0
.....................................................................TGAGCATAGTAATATTCAATCAATATA........................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................TTAATTTTTAGACAAACGAAGAGGGC................................... 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................TAGACAAACGAAGAGGGCGAG................................ 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................CGAGGGTAATGCCGAGGATGAGCC............ 24 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................AATGCCGAGGATGAGCCCATCATCAAT.. 27 0 1 1.00 1 1 0 0 0 0
........................................................TTGAGAAAACTGCTGAGCATAGTAAT......................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................GAGGGCGAGGGTAATGCCGAGGATGA............... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................CAAACGAAGAGGGCGAGGGTAAT.......................... 23 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................CAGACAAACGAAGAGGGCGAGGGTA............................ 25 1 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................GCCGAGGATGATCCCATCATCA.... 22 1 1 1.00 1 0 0 1 0 0
............................................................................................................................................................................................................AACGAAGAGGGCGAGGGTAATGCCGA..................... 26 0 1 1.00 1 1 0 0 0 0
..................................................................TGCTGAGCATAGTAATATTCAATCAATA............................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................TGCCGAGGATGAGCCCATCATCAAT.. 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................TTTAATGAAGTCTACAGTGAGAGACT............................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................AACGAAGAGGGCGAGGGTAATGC........................ 23 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................TTTTTTAATTTTTAGACAAACGAAGAGG..................................... 28 0 1 1.00 1 1 0 0 0 0
...............................................................................................................TATTTTAATGAAGTCTACAGCGAGAGA................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................ACGAAGAGGGCGAGGGTAAT.......................... 20 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................GGTAATGCCGAGGATGAG.............. 18 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................AACGAAGATGGCGAGGGTAAT.......................... 21 1 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................................................GAAGAGGGCGAGGGTAATGCCG...................... 22 0 1 1.00 1 0 0 1 0 0
........................................................................................................................................................................................................GACAAACGAAGAGGGCGAGGGT............................. 22 0 1 1.00 1 0 1 0 0 0
......................................................TTTTGAGAAAACTGCTGAGCATAG............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.TAAAAAATATGTGAAATGAGAGTTCT................................................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................GAAGAGGGCGAGGGTAATGC........................ 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................TTTTTAGACAAACGAAGAGGGCGAG................................ 25 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................GACAAACGAAGAGGGCGAG................................ 19 0 1 1.00 1 0 1 0 0 0
..................................................TATTTTTTGAGAAAACTGCTGAGCATAG............................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
.....................................................TTTGTGAGAATACTGCTGAG.................................................................................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0
....................................................GTTTGTGAGAATACTGCTGA................................................................................................................................................................................... 20 3 14 0.21 3 3 0 0 0 0
...........................................................................................................................................TTTACTGATAAAATTACTCACC.......................................................................................... 22 3 5 0.20 1 0 0 0 0 1
.............................................TACATCATTTTTTGAGAAAACC........................................................................................................................................................................................ 22 3 8 0.13 1 0 0 0 0 1
......................................................................................................................................................................................TTCTTTTTTTAAGTTTTAGAC................................................ 21 2 9 0.11 1 0 0 0 0 1
......................................................................................................................................................................................................................GCGAGGGTAAGCCCGAGG................... 18 2 12 0.08 1 0 0 0 1 0
.........................................................TGAGAAAACTGCGGGGGATA.............................................................................................................................................................................. 20 3 16 0.06 1 0 0 0 1 0
...........................................................................................................................................................................................................ACACAAAGAGGGCGAGCGT............................. 19 3 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................AAGACAAAAGAAGAGGGC................................... 18 2 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................TACGAAGAGGGCTAGCGT............................. 18 3 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................................ATACGAAGAGGGCTAGCG.............................. 18 3 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

ATTTTTTTATACACTTTACTCTCAAGAAATGAAAACTTAACAAAAATTTAATAAAAAACTCTTTTGACGACTCGTATCATTATAAGTTAGTTATATTCAGATATATAAATAATAAAATTACTTCAGATGTCACTCTCTGAAACGACTAATTTAATAAGTGGTTTAATTAAGTTACCGAAACAAAAAAAAAAATTAAAAATCTGTTTGCTTCTCCCGCTCCCATTACGGCTCCTACTCGGGTAGTAGTTACC
***************************************************************************************************************...((............(((.(((...((((......((((((......))))))........))))...))).))).....))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V055
head
..................................................................ACGACTGGTATCATTATA....................................................................................................................................................................... 18 1 1 1.00 1 0 1 0
..............................................................................................................................................................................CCGAAACAAAAAAAAAAA........................................................... 18 0 2 0.50 1 1 0 0
..............................................................................................................................................................................CCGAAACAAAAAGAAAAAT.......................................................... 19 1 3 0.33 1 1 0 0
.....................................................................................................................................................................................................................................TCCTACTTGGATAGTAGT.... 18 2 4 0.25 1 0 0 1
.........................................................................................................................................................................AGCTACCGAAACAAAAAAAGA............................................................. 21 2 4 0.25 1 1 0 0
........................................................................................................................................................................AAGTCACCCAAACAAAAAAAA.............................................................. 21 2 6 0.17 1 1 0 0
.................ACACTCAAGAAATGACAAT....................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:18182603-18182853 + dan_2711 TAAAAAAA--TATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAGAGTTCTTTACTTTTGAATTGTTTTTAAATTATTTTTTGAGAAAACTGCTGAGCATAGTAATATTCAATCAATATAAGTCTATATATTTATTATTTTAATGAAGTCTACAGTGAGAGACTTTGCTGATTAAATTATTCACCAAATTAATTCAATGGCTTTGTTTTTTT---TTTTAATTTTTAGACAAACGAAGAG---------------------GGCGAGGGTAATGCCGAGGATGAGCCCATCATCAATGG
droBip1 scf7180000396741:1365586-1365819 + TAA-------TCTGTGATCCTAGACGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------ACCATT--------------GCT---------GAT-----------------------CAAATGAATTAA-------------GCGAACCAGCCTTAAAT-ATTTTT--------------------------TTCATTTAATATAAATATTT-TGTTTGTGTGTTTGAAAAAGTCTAAGGGGAAAGTCTTTTCTGATTGAGTTATTCACCAAACTAATTCACGGGTTT---TTCTTT---TTCGCATTTTTAGACAAACGAAGAG---------------------GGCGAGGGCAATGCTGAGGATGAGCCCATCATCAATGG
droKik1 scf7180000302686:904676-904770 - ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-----------T-----------------------------------------------TATAAACATTTTCTAATAAGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---TATTTTCTTACAGACAACCGAGGAA---------------------GGCGAGGGCAATGCCGAAGATGAGCCCATTATTAATGG
droFic1 scf7180000453824:666923-666974 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCAATCATCAATGG
droEle1 scf7180000491249:6572623-6572683 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGACAACCGAGGAG---------------------GGCGAGGGCAATGCGGAGGATGAGCCCATCATCAATGG
droRho1 scf7180000779614:51691-51751 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGACAACCGAGGAG---------------------GGCGAGGGCAATGCGGAGGATGAGCCCATCATCAATGG
droBia1 scf7180000302529:197597-197648 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCAATCATCAATGG
droTak1 scf7180000413087:19526-19577 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGTGAGGGCAATGCGGAGGATGAGCCAATCATTAATGG
droEug1 scf7180000409471:189263-189314 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCCGAGGACGAGCCGATCATCAATGG
dm3 chr3L:19278151-19278202 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCGATCATAAATGG
droSim2 3l:18937796-18937946 - ATA-------TATGTAATCTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGG-AAAAATCAAAAATGAGTTATATTATATGGC--------TTGTTATAGTCTATACATTGAAAACTAATTGAGTGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTCCGCAGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCGATCATAAATGG
droSec2 scaffold_19:1231854-1231935 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------CAAAACTAATTGAGTGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTTTGCAGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCGATCATAAATGG
droYak3 3L:21281064-21281199 + TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATATGGGTGG-AGA----------------TGCTACTTGGCAATATTATTTATTACATTATATAAATTCTAAACTAATTGAGCATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTCCGCAGACAACCGAGGAA---------------------GGCGAGGGCAACGCGGAGGACGAGCCAATCATAAATGG
droEre2 scaffold_4784:19089985-19090047 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTCCGTAGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGACGAGCCAATCATAAATGG
dp5 XR_group8:7365062-7365130 - G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---CTCTTTTTTGCAGGCAAACGAGGAG---------------------GGCGCGGAAAATCCCGAGGACGAGCCCATCATAAATGG
droPer2 scaffold_48:155173-155241 - G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---CTCTTTTTTGCAGGCAAACGAGGAG---------------------GGCGCGGAAAATCCCGAGGACGAGCCCATCATAAATGG
droWil2 scf2_1100000004540:566250-566358 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------AAATTTGTTGAATCTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTC---TTTTAATTATCAGAACAACGAGGTGGACGGCAGCGGAGGAGTCGGCGGCGCTGGTAATGCTGAGGCAGAGCCCATCATAAATGG
droVir3 scaffold_13049:12855909-12855977 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTTTTTTGAAATGCAGACCAACGAGGAG---------------------GGCG---CCAATGCAGAGGATGAACCTATTATAAATGG
droMoj3 scaffold_6680:14555269-14555559 + GAAAAAAAAAGTTTTGTTTTTAAATATACATATTTTAGCCAGGTTCTTTTATTTTAATTAAAATTATTATTTTATTATATTATTTTAAAATTTTTAATTAAAATTTGGATAATTTATGTATATTAATTGCATATATTTGCATTATAATTTAAAAATAATTTTATAGCTTAAGCTTCCAAGCTTTAATTTTCTTGATAATTAATCAGCTCTCTTTTGATCCATCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---TTCTCTGCTGCAGACGAACGAGGAG---------------------GGCGTTGCCAATGCAGAGGATGAGCCGATTATAAATGG
droGri2 scaffold_15110:23508320-23508422 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACAAAAT------A------------------------------TTTAATCTTTTTTATTTTTTTTATATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAAATGCAGGCGAACGAGGAT---------------------GCCGCAACAAATGCAGAGGATGAGCCCATTATAAATGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TAAAAAAA--TATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAGAGTTCTTTACTTTTGAATTGTTTTTAAATTATTTTTTGAGAAAACTGCTGAGCATAGTAATATTCAATCAATATAAGTCTATATATTTATTATTTTAATGAAGTCTACAGTGAGAGACTTTGCTGATTAAATTATTCACCAAATTAATTCAATGGCTTTGTTTTTTT---TTTTAATTTTTAGACAAACGAAGAG---------------------GGCGAGGGTAATGCCGAGGATGAGCCCATCATCAATGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
TAAAAAAA--TATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAGAGTTCTT.......................................................................................................................................................................................................................................................2816.006000060
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTTTAGACAAACGAAGAG---------------------GGC...................................2514.004000040
TAAAAAAA--TATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAGAGTTC.........................................................................................................................................................................................................................................................2613.003000030
TAAAAAAA--TATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGAGAGTTCT........................................................................................................................................................................................................................................................2712.002000020
.........................................................................................................................................................................................................................................................................................................................................................TTGAGAAAACTGCTGAGCATAGTAATA................................................................................................................................................................................................2712.002100010
..................................................................................................................................................................................................................................................................................................................................................TTATTTTTTGAGAAAACTGCTGAGCA........................................................................................................................................................................................................2612.002000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGACAAACGAAGAG---------------------GGCGAGGG..............................2412.002000020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTTTTAGACAAACGAAGAG---------------------GGC...................................2712.002000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGACAAACGAAGAG---------------------GGCGAGG...............................2412.002000110
.....................................................................................................................................................................................................................................................................................................................................................................CTGAGCATAGTAATATTCAATCAATA.....................................................................................................................................................................................2611.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGACAAACGAAGAG---------------------GGCGAGGGTA............................2611.001000001
................................................................................................................................................................................................................................................................................................................AATGAGAGTTCTTTACTTTTGAATTGT.........................................................................................................................................................................................................................................2711.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG---------------------GGCGAGGGTAATGCCGAGG...................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAG---------------------GGCGAGGGTAA...........................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGGGTAATGCCGAGGATG................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGGTAATGCCGAGGATGA...............2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATGAGCCCATC........1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................TGAGCATAGTAATATTCAATCAATATA...................................................................................................................................................................................2711.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTTTTAGACAAACGAAGAG---------------------GGC...................................2611.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAAACGAAGAG---------------------GGCGAG................................2111.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGGTAATGCCGAGGATGAGCC............2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCCGAGGATGAGCCCATCATCAAT..2711.001000010
.........................................................................................................................................................................................................................................................................................................................................................TTGAGAAAACTGCTGAGCATAGTAAT.................................................................................................................................................................................................2611.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG---------------------GGCGAGGGTAATGCCGAGGATGA...............2611.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGAAGAG---------------------GGCGAGGGTAAT..........................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAAGAG---------------------GGCGAGGGTAATGCCGA.....................2611.001000010
...................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCATAGTAATATTCAATCAATA.....................................................................................................................................................................................2811.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATGAGCCCATCATCAAT..2511.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGAAGTCTACAGTGAGAGACT.......................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAAGAG---------------------GGCGAGGGTAATGC........................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TTTTAATTTTTAGACAAACGAAGAG---------------------G.....................................2811.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGAG---------------------GGCGAGGGTAAT..........................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAATGCCGAGGATGAG..............1811.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAG---------------------GGCGAGGGTAATGCCG......................2211.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAACGAAGAG---------------------GGCGAGGGT.............................2211.001100000
.......................................................................................................................................................................................................................................................................................................................................................TTTTGAGAAAACTGCTGAGCATAG.....................................................................................................................................................................................................2411.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAG---------------------GGCGAGGGTAATGC........................2011.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAGACAAACGAAGAG---------------------GGCGAG................................2511.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAACGAAGAG---------------------GGCGAG................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................TATTTTTTGAGAAAACTGCTGAGCATAG.....................................................................................................................................................................................................2811.001000010
droBip1
TAA-------TCTGTGATCCTAGACGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------ACCATT--------------GCT---------GAT-----------------------CAAATGAATTAA-------------GCGAACCAGCCTTAAAT-ATTTTT--------------------------TTCATTTAATATAAATATTT-TGTTTGTGTGTTTGAAAAAGTCTAAGGGGAAAGTCTTTTCTGATTGAGTTATTCACCAAACTAATTCACGGGTTT---TTCTTT---TTCGCATTTTTAGACAAACGAAGAG---------------------GGCGAGGGCAATGCTGAGGATGAGCCCATCATCAATGGSizeHit CountTotal NormTotal
No Reads
droKik1
ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-----------T-----------------------------------------------TATAAACATTTTCTAATAAGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---TATTTTCTTACAGACAACCGAGGAA---------------------GGCGAGGGCAATGCCGAAGATGAGCCCATTATTAATGGSizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCAATCATCAATGGSizeHit CountTotal NormTotal
No Reads
droEle1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGACAACCGAGGAG---------------------GGCGAGGGCAATGCGGAGGATGAGCCCATCATCAATGGSizeHit CountTotal NormTotal
No Reads
droRho1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGACAACCGAGGAG---------------------GGCGAGGGCAATGCGGAGGATGAGCCCATCATCAATGGSizeHit CountTotal NormTotal
No Reads
droBia1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCAATCATCAATGGSizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGTGAGGGCAATGCGGAGGATGAGCCAATCATTAATGGSizeHit CountTotal NormTotal
No Reads
droEug1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCCGAGGACGAGCCGATCATCAATGGSizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCGATCATAAATGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGAG---------------------GGCGAGGGCA............................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCGAGGAG---------------------GGCGAGGG..............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCGAGGAG---------------------GGCGAG................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGAGGATGAGCCGATCA.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACGCGGAGGATGAGCCG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGGAGGATGAGCCGA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCAACGCGGAGGATGAGCCG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGAGGATGAGCCGATC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGAGGAG---------------------GGCGAGGGCAACGCG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGATGAGCCGATCATAAA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCGGAGGATGAGCCGATCATA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGA...............3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCGAGGAG---------------------GGCGAGGGC.............................2211.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCGAGGAG---------------------GGCGAGGG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGAG---------------------GGCGAGGGCAACGC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAG---------------------GGCGAGGGCAACGCGGA.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCAACGCGGAGGATGAGCCGATCATA.....3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGGATGAGCCGATC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGAGGAG---------------------GGCGAGGGCA............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGGATGAGCCGATC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
ATA-------TATGTAATCTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGG-AAAAATCAAAAATGAGTTATATTATATGGC--------TTGTTATAGTCTATACATTGAAAACTAATTGAGTGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTCCGCAGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCGATCATAAATGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------------------------------------------CAAAACTAATTGAGTGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTTTGCAGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGATGAGCCGATCATAAATGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGGAGGATGAGCCGATCATAA....2511.0010100
droYak3
TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATATGGGTGG-AGA----------------TGCTACTTGGCAATATTATTTATTACATTATATAAATTCTAAACTAATTGAGCATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTCCGCAGACAACCGAGGAA---------------------GGCGAGGGCAACGCGGAGGACGAGCCAATCATAAATGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCGAGGAA---------------------GGCGAGGGC.............................2221.00200000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACGCGGAGGACGAGCC............2120.50101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGGAGGACGAGCCAATCATA.....2420.50100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGAGGACGAGCCAATCATAAAT..2620.50100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACGCGGAGGACGAG..............1920.50100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAACGCGGAGGACGAGC.............2020.50100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------GGCGAGGGCAACGCGGAGGA..................2120.50101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGGAGGACGAGCCAAT.........2020.50100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGAGGAA---------------------GGCGAGGGCAACGC........................2420.50100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGAA---------------------GGCGAGGGCAACGCGG......................2520.50100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGAGGACGAGCCAATC........2020.50100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGGACGAGCCAATCATAAATG.2520.50100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCGGAGGACGAGCCAATCATA.....2620.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGACGAGCCAATCATAAA...2220.50100000010000
droEre2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------ACTCCGTAGACAACCGAGGAG---------------------GGCGAGGGCAACGCGGAGGACGAGCCAATCATAAATGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGAGGACGAGCCAATCA.......2112.0022000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCGAGGAG---------------------GGCGAGGGC.............................2212.0022000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGAG---------------------GGCGAGGGCA............................1912.0021000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCAACGCGGAGGACG................1812.0021000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAG---------------------GGCGAGGGCAACGCGGA.....................2411.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCGAGGAG---------------------GGCGAGGGCAAC..........................2511.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCGGAGGACGAGCCAA..........2111.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCGGAGGACGAGCCAATCA.......2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGAG---------------------GGCGAGGGCA............................1811.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGAGGAG---------------------GGCGAGGGC.............................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAG---------------------GGCGAGGGCAACG.........................1811.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGGCAACGCGGAGGACGAGCCA...........2511.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGAG---------------------GGCGAGGGCAACG.........................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCAACGCGGAGGACGA...............2011.0011000000
dp5
G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---CTCTTTTTTGCAGGCAAACGAGGAG---------------------GGCGCGGAAAATCCCGAGGACGAGCCCATCATAAATGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGAGGAG---------------------GGCGCGGAAAA...........................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGGAG---------------------GGCGCGGAAA............................1911.0010000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCGAGGACGAGCCCATCA.......2211.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAACGAGGAG---------------------GGCGCGGA..............................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCGAGGACGAGCCCATCATA.....2311.0010000000010
droPer2
G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---CTCTTTTTTGCAGGCAAACGAGGAG---------------------GGCGCGGAAAATCCCGAGGACGAGCCCATCATAAATGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCGAGGACGAGCCCATCAT......2211.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGGAG---------------------GGCGCGGAA.............................1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAG---------------------GGCGCGGAAAATCC........................2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGGAG---------------------GGCGCGGAAAA...........................2011.001000001
droWil2
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------AAATTTGTTGAATCTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTC---TTTTAATTATCAGAACAACGAGGTGGACGGCAGCGGAGGAGTCGGCGGCGCTGGTAATGCTGAGGCAGAGCCCATCATAAATGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGGCAGCGGAGGAGTCGGCGGCG..................................2712.00200200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGTGGACGGCAGCGGAGG.............................................2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGGCGCTGGTAATGCTGAGGCA.................2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAGCGGAGGAGTCGGC......................................1911.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACGAGGTGGACGGCAGCG.................................................2311.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGGCAGAGCCCATCATAAAT..2411.00100100
droVir3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTTTTTTGAAATGCAGACCAACGAGGAG---------------------GGCG---CCAATGCAGAGGATGAACCTATTATAAATGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGGATGAACCTAT.........1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGACCAACGAGGAG---------------------GGCG---...............................2311.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGGAG---------------------GGCG---CCAATG.........................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACGAGGAG---------------------GGCG---CCAA...........................2111.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCAACGAGGAG---------------------GGCG---C..............................2011.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
GAAAAAAAAAGTTTTGTTTTTAAATATACATATTTTAGCCAGGTTCTTTTATTTTAATTAAAATTATTATTTTATTATATTATTTTAAAATTTTTAATTAAAATTTGGATAATTTATGTATATTAATTGCATATATTTGCATTATAATTTAAAAATAATTTTATAGCTTAAGCTTCCAAGCTTTAATTTTCTTGATAATTAATCAGCTCTCTTTTGATCCATCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---TTCTCTGCTGCAGACGAACGAGGAG---------------------GGCGTTGCCAATGCAGAGGATGAGCCGATTATAAATGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGGATGAGCCGATTATA.....2211.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGGATGAGCCGATTATAA....2311.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG---------------------GGCGTTGCCAATGCAGAGGAT.................2411.001001000
droGri2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACAAAAT------A------------------------------TTTAATCTTTTTTATTTTTTTTATATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAAATGCAGGCGAACGAGGAT---------------------GCCGCAACAAATGCAGAGGATGAGCCCATTATAAATGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:12 AM