ID:

dan_27

Coordinate:

scaffold_13266:2579731-2579788 +

Confidence:

Known Ortholog

Class:

Canonical miRNA

Genomic Locale:

intron

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.3 -32.2

Flybase annnotation

intron [Dana\GF12641-in]; utr3 [utr3_minus_2846]

No Repeatable elements found

Sense Strand Reads

GGGGTTTTAATGGAATCAGTAAGTGGAAAGGTGTACTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATAGGTATTTGATCATCCCCTTGTTGCAAACCTCACGCCCAAGGTGCTTTCCAACGGCAACATATCAGCAAGGAAGACTAAGATTAAA

***********************************.(((((((((((((((((...((((((((((...(((.(((.....))))))...))))))))))...)))))))))))))...))))***********************************
Read size # Mismatch Hit Count Total Norm Total M058

embryo

M044

female body

V106

head

V105

male body
V055

head

V039

embryo

......................................................................................CCCCTTGTTGCAAACCTCACGC.................................................. 22 0 1 7701.00 7701 4818 2600 100 14 105 64
......................................................................................CCCCTTGTTGCAAACCTCACG................................................... 21 0 1 2345.00 2345 705 1090 285 32 149 84
..................................................GTGTGATTTGTGGCAAAGTGA....................................................................................... 21 0 1 610.00 610 3 119 115 355 15 3
......................................................................................CCCCTTGTTGCAAACCTCACGT.................................................. 22 1 1 342.00 342 71 115 61 33 51 11
......................................................................................CGCCTTGTTGCAAACCTCACGC.................................................. 22 1 1 332.00 332 331 1 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGAT...................................................................................... 22 0 1 318.00 318 8 75 119 100 14 2
.......................................................................................CCCTTGTTGCAAACCTCACGC.................................................. 21 0 1 284.00 284 36 243 0 0 4 1
......................................................................................CCCCTTGTTGCAAACCTCAC.................................................... 20 0 1 196.00 196 128 49 8 3 5 3
......................................................................................CCACTTGTTGCAAACCTCACGC.................................................. 22 1 1 189.00 189 188 1 0 0 0 0
......................................................................................CCCTTTGTTGCAAACCTCACGC.................................................. 22 1 1 177.00 177 177 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTG........................................................................................ 20 0 1 167.00 167 0 23 61 74 9 0
.......................................................................................CCCTTGTTGCAAACCTCACG................................................... 20 0 1 113.00 113 8 99 2 0 4 0
......................................................................................CCCCTTGTTGCAAACCTCACGCT................................................. 23 1 1 105.00 105 59 41 3 0 2 0
......................................................................................CCCCTTGTGGCAAACCTCACGC.................................................. 22 1 1 96.00 96 0 96 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCA................................................. 23 1 1 75.00 75 58 11 1 0 0 5
..................................................GTGTGATTTGTGGCAAAGT......................................................................................... 19 0 1 75.00 75 0 9 16 48 1 1
.........................................................................................CTTGTTGCAAACCTCACGC.................................................. 19 0 1 73.00 73 42 29 0 0 0 2
...............................TGTACTGGACATTTTGGGT............................................................................................................ 19 0 1 73.00 73 1 15 44 7 3 3
......................................................................................CGCCTTGTTGCAAACCTCACG................................................... 21 1 1 57.00 57 57 0 0 0 0 0
...................................................TGTGATTTGTGGCAAAGTGA....................................................................................... 20 0 1 54.00 54 1 15 18 14 6 0
......................................................................................CCCCTTGTGGCAAACCTCACG................................................... 21 1 1 52.00 52 0 52 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGATT..................................................................................... 23 1 1 49.00 49 1 13 19 16 0 0
...................................................TGTGATTTGTGGCAAAGTGAT...................................................................................... 21 0 1 46.00 46 2 10 20 10 4 0
......................................................................................CCCCTTGTTGCAAACCTCACGCC................................................. 23 0 1 45.00 45 35 9 1 0 0 0
......................................................................................CCCCTTGTAGCAAACCTCACGC.................................................. 22 1 1 42.00 42 0 42 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGA.................................................. 22 1 1 38.00 38 17 19 1 0 1 0
......................................................................................CCACTTGTTGCAAACCTCACG................................................... 21 1 1 38.00 38 33 1 3 0 1 0
......................................................................................CCCCTTGTTGCAAACCTCACAC.................................................. 22 1 1 37.00 37 36 1 0 0 0 0
......................................................................................TCCCTTGTTGCAAACCTCACGC.................................................. 22 1 1 36.00 36 33 1 0 1 1 0
.....................................................................................CCCCCTTGTTGCAAACCTCACGC.................................................. 23 1 1 35.00 35 32 3 0 0 0 0
......................................................................................CTCCTTGTTGCAAACCTCACGC.................................................. 22 1 1 35.00 35 34 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCAA................................................ 24 2 1 34.00 34 34 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGATA..................................................................................... 23 0 1 32.00 32 2 5 20 5 0 0
......................................................................................CCCCTTGTTGAAAACCTCACGC.................................................. 22 1 1 28.00 28 28 0 0 0 0 0
......................................................................................CCCTTTGTTGCAAACCTCACG................................................... 21 1 1 28.00 28 27 1 0 0 0 0
........................................................................................CCTTGTTGCAAACCTCACGC.................................................. 20 0 1 28.00 28 17 11 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCA..................................................... 19 0 1 28.00 28 17 7 2 1 1 0
..........................................................................................TTGTTGCAAACCTCACGC.................................................. 18 0 1 25.00 25 16 9 0 0 0 0
......................................................................................CCCCTTGTAGCAAACCTCACG................................................... 21 1 1 23.00 23 0 23 0 0 0 0
......................................................................................CCCCTTGTTGCACACCTCACGC.................................................. 22 1 1 19.00 19 19 0 0 0 0 0
......................................................................................CCCCTTTTTGCAAACCTCACGC.................................................. 22 1 1 19.00 19 18 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGTT................................................. 23 2 1 19.00 19 2 15 2 0 0 0
......................................................................................CCCCTTGTCGCAAACCTCACGC.................................................. 22 1 1 19.00 19 5 14 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCTT................................................ 24 2 1 17.00 17 2 13 1 0 0 1
......................................................................................CCCCTTGTTGCAAAACTCACGC.................................................. 22 1 1 17.00 17 17 0 0 0 0 0
..................................................GTGTGATTTGTAGCAAAGTGAT...................................................................................... 22 1 1 17.00 17 1 16 0 0 0 0
......................................................................................CCCCTTGTTGCAAACTTCACGC.................................................. 22 1 1 15.00 15 15 0 0 0 0 0
......................................................................................CCGCTTGTTGCAAACCTCACGC.................................................. 22 1 1 15.00 15 14 0 1 0 0 0
.......................................................................................CCCTTGTTGCAAACCTCACGT.................................................. 21 1 1 15.00 15 1 10 0 1 3 0
......................................................................................TCCCTTGTTGCAAACCTCACG................................................... 21 1 1 15.00 15 11 1 1 0 2 0
......................................................................................CCCCTTGCTGCAAACCTCACGC.................................................. 22 1 1 13.00 13 9 2 0 0 1 1
.........................................................................................CTTGTTGCAAACCTCACG................................................... 18 0 1 13.00 13 5 7 1 0 0 0
......................................................................................CCTCTTGTTGCAAACCTCACGC.................................................. 22 1 1 12.00 12 11 1 0 0 0 0
......................................................................................CGCTTTGTTGCAAACCTCACGC.................................................. 22 2 1 12.00 12 12 0 0 0 0 0
......................................................................................CCCCTGGTTGCAAACCTCACGC.................................................. 22 1 1 11.00 11 11 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACTC.................................................. 22 1 1 11.00 11 5 1 1 0 3 1
......................................................................................CCCCTTGTTGCAAACCTCACGG.................................................. 22 1 1 11.00 11 0 10 1 0 0 0
......................................................................................CCCCTTGTCGCAAACCTCACG................................................... 21 1 1 11.00 11 1 9 0 1 0 0
..................................................GTGTGATTTGTGGCAAAG.......................................................................................... 18 0 1 10.00 10 0 2 4 2 2 0
...................................................TGTGATTTGTGGCAAAGTGATA..................................................................................... 22 0 1 9.00 9 0 3 3 2 0 1
..................................................GTGTGATTTGTGGCAAAGTGATAGGT.................................................................................. 26 0 1 9.00 9 0 1 0 8 0 0
......................................................................................CCCCTTGTTTCAAACCTCACGC.................................................. 22 1 1 9.00 9 7 1 0 0 0 1
.......................................................................................CCCTTGTTGCAAACCTCACGCT................................................. 22 1 1 9.00 9 1 7 0 0 1 0
...................................................TGTGATTTGTGGCAAAGTG........................................................................................ 19 0 1 8.00 8 0 3 4 1 0 0
......................................................................................CCCCTTGTTGCAAACCTCACC................................................... 21 1 1 8.00 8 5 2 0 0 0 1
......................................................................................ACCCTTGTTGCAAACCTCACG................................................... 21 1 1 8.00 8 0 3 2 0 3 0
..................................................GTGTGATTTGTGGCAAAGTGC....................................................................................... 21 1 1 8.00 8 0 0 1 6 1 0
........................................................................................CCTTGTTGCAAACCTCACG................................................... 19 0 1 8.00 8 2 6 0 0 0 0
......................................................................................CCACTTGTTGCAAACCTCAC.................................................... 20 1 1 7.00 7 7 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAAACTCACG................................................... 21 1 1 7.00 7 4 1 1 0 1 0
......................................................................................CTCCTTGTTGCAAACCTCACG................................................... 21 1 1 7.00 7 7 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACT................................................... 21 1 1 7.00 7 1 1 5 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCATGC.................................................. 22 1 1 7.00 7 6 0 1 0 0 0
......................................................................................CCCCTTGTGGCAAACCTCACGT.................................................. 22 2 1 7.00 7 0 7 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACCC.................................................. 22 1 1 7.00 7 5 0 0 0 1 1
......................................................................................CCCCTTGTTGCAAGCCTCACGC.................................................. 22 1 1 7.00 7 4 3 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGATC..................................................................................... 23 1 1 7.00 7 0 2 4 1 0 0
......................................................................................CGCCTTGTTGCAAACCTCAC.................................................... 20 1 1 7.00 7 7 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCCA................................................ 24 1 1 6.00 6 6 0 0 0 0 0
......................................................................................CCTCTTGTTGCAAACCTCACG................................................... 21 1 1 6.00 6 4 1 1 0 0 0
......................................................................................CCCTTTGTTGCAAACCTCAC.................................................... 20 1 1 6.00 6 6 0 0 0 0 0
......................................................................................GCCCTTGTTGCAAACCTCACG................................................... 21 1 1 6.00 6 1 3 0 0 1 1
......................................................................................CCCCTTGTTGCAAACCTCGCGC.................................................. 22 1 1 6.00 6 3 3 0 0 0 0
......................................................................................CCCCTTGTTGCACACCTCACG................................................... 21 1 1 6.00 6 4 0 0 0 1 1
......................................................................................CCCATTGTTGCAAACCTCACG................................................... 21 1 1 6.00 6 0 0 5 0 1 0
........................................................................................CCTTGTTGCAAACCTCACGCTT................................................ 22 2 1 6.00 6 3 2 1 0 0 0
.....................................................................................TCCCCTTGTTGCAAACCTCACG................................................... 22 0 1 6.00 6 1 5 0 0 0 0
..........................................................................................TGGTTGCAAACCTCACGC.................................................. 18 1 1 6.00 6 6 0 0 0 0 0
..................................................GTGTGATTTGTTGCAAAGTGA....................................................................................... 21 1 1 6.00 6 0 1 2 2 1 0
......................................................................................CCCCTTGTTGAAAACCTCACG................................................... 21 1 1 6.00 6 4 0 1 0 1 0
..................................................GTGTGATTTGTGGCAAAGTGT....................................................................................... 21 1 1 6.00 6 0 1 1 4 0 0
......................................................................................CCCCTCGTTGCAAACCTCACGC.................................................. 22 1 1 6.00 6 4 2 0 0 0 0
........................................................................................CCCCTTTGCAAACCTCACGC.................................................. 20 3 2 5.50 11 7 4 0 0 0 0
......................................................................................CGCCTTGTTGCAAACCTCACGCT................................................. 23 2 1 5.00 5 5 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCCCACGC.................................................. 22 1 1 5.00 5 4 1 0 0 0 0
.........................................................................................CGTGTTGCAAACCTCACGC.................................................. 19 1 1 5.00 5 5 0 0 0 0 0
......................................................................................CCCCCTGTTGCAAACCTCACGC.................................................. 22 1 1 5.00 5 4 0 0 0 1 0
..................................................GTGTGATTTGTAGCAAAGTG........................................................................................ 20 1 1 5.00 5 0 3 2 0 0 0
......................................................................................CCACTTGTTGCAAACCTCACGT.................................................. 22 2 1 5.00 5 4 0 1 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCTA................................................ 24 2 1 5.00 5 4 0 0 0 0 1
......................................................................................TGCCTTGTTGCAAACCTCACGC.................................................. 22 2 1 5.00 5 5 0 0 0 0 0
......................................................................................GCCCTTGTTGCAAACCTCACGC.................................................. 22 1 1 5.00 5 0 5 0 0 0 0
......................................................................................CCGCTTGTTGCAAACCTCACG................................................... 21 1 1 5.00 5 2 0 2 0 0 1
.....................................................................................CCCCCTTGTTGCAAACCTCACG................................................... 22 1 1 5.00 5 4 1 0 0 0 0
.......................................................................................CCCTTGTTGCAAACCTCAC.................................................... 19 0 1 5.00 5 1 4 0 0 0 0
..................................................GTGTGATTTGTGTCAAAGTGA....................................................................................... 21 1 1 5.00 5 0 2 1 1 1 0
.................................................TGTGTGATTTGTGGCAAAGTG........................................................................................ 21 0 1 4.00 4 0 0 2 0 2 0
..................................................GTGTGATTTGTAGCAAAGTGA....................................................................................... 21 1 1 4.00 4 0 3 1 0 0 0
......................................................................................CTCCTTGTTGCAAACCTCAC.................................................... 20 1 1 4.00 4 4 0 0 0 0 0
..................................................GCGTGATTTGTGGCAAAGTGA....................................................................................... 21 1 1 4.00 4 0 1 0 2 1 0
......................................................................................CCCCTTGTTGCAAACCTCCCG................................................... 21 1 1 4.00 4 0 0 0 0 4 0
..................................................GTGTGATTTGTGGCAAAGTGAC...................................................................................... 22 1 1 4.00 4 0 2 2 0 0 0
......................................................................................CGCCTTGTTGCAAACCTCACAC.................................................. 22 2 1 4.00 4 4 0 0 0 0 0
......................................................................................CGCCTTGTTGCAAACCTCACGCA................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACA................................................... 21 1 1 4.00 4 3 0 1 0 0 0
......................................................................................CACCTTGTTGCAAACCTCACGC.................................................. 22 1 1 4.00 4 1 0 3 0 0 0
.........................................................................................CTTGTTGCAAACCTCACGT.................................................. 19 1 1 4.00 4 2 1 0 0 0 1
.....................................................................................GCCCCTTGTTGCAAACCTCACGC.................................................. 23 1 1 4.00 4 0 4 0 0 0 0
.......................................................................................CCCTTGTTGCAAACCTCACGCTT................................................ 23 2 1 4.00 4 1 3 0 0 0 0
..................................................GTGTGATTTGTGACAAAGTGA....................................................................................... 21 1 1 4.00 4 0 0 0 4 0 0
......................................................................................CCCCTTTTTGCAAACCTCACG................................................... 21 1 1 4.00 4 4 0 0 0 0 0
......................................................................................CCCCTTCTTGCAAACCTCACGC.................................................. 22 1 1 4.00 4 2 2 0 0 0 0
......................................................................................CCCCTTGTTTCAAACCTCACG................................................... 21 1 1 4.00 4 1 0 1 0 0 2
...................................................TGTGATTTGTGGCAAAGTGATT..................................................................................... 22 1 1 4.00 4 0 1 1 2 0 0
......................................................................................ACCCTTGTTGCAAACCTCACGC.................................................. 22 1 1 4.00 4 1 2 0 0 1 0
.......................................................................................CCCTTGTTGCAAACCTCACGCC................................................. 22 0 1 4.00 4 4 0 0 0 0 0
......................................................................................CCCTTTGTTGCAAACCTCACGCC................................................. 23 1 1 3.00 3 3 0 0 0 0 0
......................................................................................CCCCTTGTTGCAGACCTCACGC.................................................. 22 1 1 3.00 3 0 3 0 0 0 0
...................................................................................ATCCCCCTTGTTGCAAACCTCACGC.................................................. 25 3 1 3.00 3 3 0 0 0 0 0
......................................................................................CCCCTTGTTGCAACCCTCACGC.................................................. 22 1 1 3.00 3 0 1 0 1 1 0
..................................................GTTTGATTTGTGGCAAAGTG........................................................................................ 20 1 1 3.00 3 0 0 3 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCGCG................................................... 21 1 1 3.00 3 1 1 1 0 0 0
..................................................GTGTGATTCGTGGCAAAGTGA....................................................................................... 21 1 1 3.00 3 0 1 1 1 0 0
......................................................................................CCCCTTGTTGCAAACCTCACAT.................................................. 22 2 1 3.00 3 0 1 1 1 0 0
......................................................................................CCCCTTGTTGCACAACTCACGC.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
..................................................GTGTGATTTGTGGCAGAGTGA....................................................................................... 21 1 1 3.00 3 0 0 1 2 0 0
...................................................TGTGATTTGTAGCAAAGTGAT...................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0
......................................................................................CCCCTTGATGCAAACCTCACG................................................... 21 1 1 3.00 3 1 1 0 0 1 0
..................................................GGGTGATTTGTGGCAAAGTGAT...................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0
......................................................................................CCCCTTGTTCCAAACCTCACGC.................................................. 22 1 1 3.00 3 1 1 1 0 0 0
......................................................................................CCCCTGGTTGCAAACCTCACG................................................... 21 1 1 3.00 3 0 0 0 0 0 3
......................................................................................CACCTTGTTGCAAACCTCACG................................................... 21 1 1 3.00 3 0 0 2 0 1 0
....................................................................................TCCCCCTTGTTGCAAACCTCACGC.................................................. 24 2 1 3.00 3 2 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCCCACG................................................... 21 1 1 3.00 3 0 0 0 0 3 0
......................................................................................CCCCTTGTTGCAAACCTTACGC.................................................. 22 1 1 3.00 3 3 0 0 0 0 0
......................................................................................CCCCTTGTTGCGAACCTCACGC.................................................. 22 1 1 3.00 3 1 1 1 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGATAG.................................................................................... 24 0 1 3.00 3 0 1 0 2 0 0
..............................GTGTACTGGACATTTTGGGT............................................................................................................ 20 0 1 3.00 3 1 0 2 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCAT.................................................... 20 1 1 3.00 3 2 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCAAA............................................... 25 2 1 3.00 3 3 0 0 0 0 0
......................................................................................CTCTTTGTTGCAAACCTCACGC.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
.......................................................................................CCCTTGTTGCAAACCTCACGCA................................................. 22 1 1 3.00 3 0 3 0 0 0 0
......................................................................................CCCCTTGATGCAAACCTCACGC.................................................. 22 1 1 3.00 3 2 1 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTT........................................................................................ 20 1 1 3.00 3 0 1 1 1 0 0
.................................................TGTGTGATTTGTGGCAAAGTGA....................................................................................... 22 0 1 3.00 3 0 2 1 0 0 0
..................................................GTGTGATTTGCGGCAAAGTG........................................................................................ 20 1 1 3.00 3 0 0 1 0 2 0
..................................................GTGCGATTTGTGGCAAAGTGA....................................................................................... 21 1 1 3.00 3 0 1 0 1 1 0
..................................................GTGTGATTGGTGGCAAAGTGA....................................................................................... 21 1 1 3.00 3 0 2 0 1 0 0
........................................................................................CCCTGTTGCAAACCTCACGC.................................................. 20 1 1 3.00 3 3 0 0 0 0 0
......................................................................................CCCCTTGTCGCAAACCTCACGT.................................................. 22 2 1 3.00 3 0 3 0 0 0 0
......................................................................................CCCCTTGTTGCAAAACTCATGC.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
......................................................................................CGCCTTGTTGCAAACCTCACGT.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCG................................................. 23 1 1 3.00 3 1 2 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCTTT............................................... 25 3 1 2.00 2 0 2 0 0 0 0
.......................................................................................CCCTTGTTGCAAACCTCACGTT................................................. 22 2 1 2.00 2 0 2 0 0 0 0
.......................................................................................CCCTTGTTTCAAACCTCACG................................................... 20 1 1 2.00 2 0 2 0 0 0 0
..................................................GTGTGATTAGTGGCAAAGTGA....................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
......................................................................................CCCTTTGTTGCAAACCTCACAC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GAGTGATTTGTGGCAAAGTGA....................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
..................................................GTGTGATTTCTGGCAAAGTG........................................................................................ 20 1 1 2.00 2 0 0 2 0 0 0
......................................................................................CCCCTTGTTGAAAACCTCAC.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGTGATTTGCGGCAAAGTGA....................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
..................................................GTGTGATTTGTGGCAAAGTTAT...................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0
.......................................................................................CCCCTGTTGCAAACCTCACGC.................................................. 21 1 1 2.00 2 0 1 0 0 0 1
......................................................................................CCACTTGTTGCAAACCTCACGCAA................................................ 24 3 1 2.00 2 2 0 0 0 0 0
......................................................................................CGCCTTGTCGCAAACCTCACG................................................... 21 2 1 2.00 2 2 0 0 0 0 0
......................................................................................CCGCTTGTTGCAAACCTCAC.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
......................................................................................CCCCGTGTTGCAAACCTCACG................................................... 21 1 1 2.00 2 1 0 0 0 1 0
......................................................................................CCCCTTGTTGCAAACCTCACGAA................................................. 23 2 1 2.00 2 1 1 0 0 0 0
......................................................................................CCCTTTGCTGCAAACCTCACGC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
...............................TGTACTGGACATTTTGGGC............................................................................................................ 19 1 1 2.00 2 2 0 0 0 0 0
......................................................................................CCATTTGTTGCAAACCTCACGC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACGCCT................................................ 24 1 1 2.00 2 0 2 0 0 0 0
......................................................................................CCCCTTGTTGCAACCCTCACG................................................... 21 1 1 2.00 2 0 0 0 0 1 1
......................................................................................CCCCTTATTGCAAACCTCACG................................................... 21 1 1 2.00 2 1 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAACATCACGC.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
.................................................TGTGTGATTTGTAGCAAAGTGA....................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..................................................GTGTGATTTGTGGCAAAATGAT...................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
.....................................................................................GCCCCTTGTTGCAAACCTCACG................................................... 22 1 1 2.00 2 0 2 0 0 0 0
.....................................................................................ACCCCTTGTTGCAAACCTCACGC.................................................. 23 1 1 2.00 2 1 1 0 0 0 0
.....................................................................................TCCCCTTGTTGCAAACCTCACGC.................................................. 23 0 1 2.00 2 1 1 0 0 0 0
......................................................................................CCCCTTATTGCAAACCTCACGC.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACGTCACGC.................................................. 22 1 1 2.00 2 1 0 0 0 1 0
......................................................................................CCCTTTTTTGCAAACCTCACGC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGATAGGTA................................................................................. 27 0 1 2.00 2 0 1 0 1 0 0
...................................................TGTGATTTATGGCAAAGTGAT...................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
......................................................................................CCCCTTGCTGCAAACCTCACGT.................................................. 22 2 1 2.00 2 0 1 0 0 0 1
......................................................................................CCCTTTGTTGCAAACCTCACGCA................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..................................................GGGTGATTTGTGGCAAAGTGA....................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
......................................................................................CGCCTTGTTGCAAACCTCACGCAA................................................ 24 3 1 2.00 2 2 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACATCACGA.................................................. 22 2 1 2.00 2 0 0 2 0 0 0
......................................................................................CCCCTTGTTGCAAGCCTCACG................................................... 21 1 1 2.00 2 1 0 0 0 1 0
..................................................GTGTGATTGGTGGCAAAGTG........................................................................................ 20 1 1 2.00 2 0 2 0 0 0 0
......................................................................................CCCCTTGTGGCAAACCTCACGA.................................................. 22 2 1 2.00 2 0 2 0 0 0 0
......................................................................................CGCCTTGTTGCACACCTCACGC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAGGTG........................................................................................ 20 1 1 2.00 2 0 1 1 0 0 0
..................................................GTGTGATTTGTGACAAAGTGAT...................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
.......................................................................................CCCTTGTTGCAAACCTCACGCAA................................................ 23 2 1 2.00 2 1 0 0 0 0 1
........................................................................................CCTTGTTGCAAACCTCACGT.................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGGT...................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
......................................................................................CCCCTTGTTGCATACCTCACG................................................... 21 1 1 2.00 2 0 0 0 1 1 0
......................................................................................CCCCTTGTTGCAAACCTCACTT.................................................. 22 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGTGATTTGTGCCAAAGTG........................................................................................ 20 1 1 2.00 2 0 0 2 0 0 0
......................................................................................CCCCGTGTTGCAAACCTCACGC.................................................. 22 1 1 2.00 2 1 0 0 0 1 0
....................................................GTGATTTGTGGCAAAGTGA....................................................................................... 19 0 1 2.00 2 0 1 0 1 0 0
.......................................................................................CGCTTGTTGCAAACCTCACGC.................................................. 21 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGATG..................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0
................................GTACTGGACATTTTGGGT............................................................................................................ 18 0 1 2.00 2 0 0 2 0 0 0
......................................................................................CCACTTGTTGCAAACCTCACGCA................................................. 23 2 1 2.00 2 2 0 0 0 0 0
......................................................................................CCCCTGGTTGCAAACCTCACGT.................................................. 22 2 1 2.00 2 0 0 0 0 2 0
......................................................................................CCCCTTGGTGCAAACCTCACGC.................................................. 22 1 1 2.00 2 1 0 0 0 1 0
......................................................................................CCCCTTGTTGCAAACATCACG................................................... 21 1 1 2.00 2 0 0 1 0 1 0
..................................................GTGTGATTTGTGGCAAAGTGATAGG................................................................................... 25 0 1 2.00 2 0 0 0 2 0 0
.......................................................................................CCCTTTTTGCAAACCTCAC.................................................... 19 1 1 2.00 2 0 2 0 0 0 0
......................................................................................CGCCTTGTTGCAAACCTCA..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
......................................................................................CGCCTTGTTGAAAACCTCACGC.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
......................................................................................CCCCTTGATGCAAACCTCAC.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
......................................................................................CGCCTTGTTGCAAACCTCACGA.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAAGTGG....................................................................................... 21 1 2 1.50 3 0 2 0 1 0 0
......................................................................................CCCCGTTTTGCAAACCTCACG................................................... 21 2 1 1.00 1 0 0 0 0 0 1
...............................TGTACTGGACATTTTGAGT............................................................................................................ 19 1 1 1.00 1 0 0 0 0 1 0
......................................................................................TCCCTTGTTGCAAACCTCAC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTGCTGCAAACCTCACGCC................................................. 23 1 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAAGCTCACG................................................... 21 1 1 1.00 1 0 0 0 0 0 1
..........................................................................................TTGTTGCAAACCTCACAC.................................................. 18 1 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTGGTTGCATACCACACGC.................................................. 22 3 1 1.00 1 0 0 0 0 1 0
......................................................................................CCCCTTGTTGCAAACCTCACGCAAT............................................... 25 3 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGATTTGTGGCAAGGTGAT...................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..................................................GAGTGATTTGTGGCATAGTGA....................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0
..................................................TTGTGATTTGTGGCAAAGTGA....................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................................CCCCTTTTTTCAAACCTCACGC.................................................. 22 2 1 1.00 1 0 0 0 0 1 0
.......................................................................................CGCTTGTTGCAAACCTCACGCT................................................. 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCACTCA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCTTTGTTGCAAACCTCACGT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................CCCTTGTTTCAAACCTCACGC.................................................. 21 1 1 1.00 1 0 1 0 0 0 0
......................................................................................CGACTTGTTGCAAACCTCACGC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
...................................................TGTGTTTTGTGGCAAAGTGAT...................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTATCGCAAACCTCACG................................................... 21 2 1 1.00 1 0 0 0 0 1 0
.....................................................................................GACCCTTGTTGCAAACCTCACGC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................ATTTGATCATCCCCTTGTTGCAAACC........................................................ 26 0 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGATTTGTAGCAAAGTGATT..................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................................................TCCTCTTGTTGCAAACCTCACG................................................... 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTCGTTGCAAACCTCACGCA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TTGTGATTTGTGGCAAAGTG........................................................................................ 20 1 1 1.00 1 0 0 1 0 0 0
..................................................GTCTGATTTGTGGCAAAGTGA....................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................CGCCTTTTGCAAACCTCACGC.................................................. 21 3 2 1.00 2 2 0 0 0 0 0
......................................................................................CCCTTTATTGCAAACCTCACGC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCACTTGTTTCCAACCTCACGCC................................................. 23 3 1 1.00 1 0 0 0 0 0 1
......................................................................................CACCTTGTTGCAAACATCACG................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.....................................................................................CCCCCTTGTTGCAAACCTCAC.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTTGTTGCAGACCTCACGC.................................................. 19 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGATTTGTGTCAAAGT......................................................................................... 19 1 1 1.00 1 0 0 0 1 0 0
......................................................................................ACCCTTGTTGCACACCTCACG................................................... 21 2 1 1.00 1 0 0 0 0 1 0
.......................................................................................TCCTTGTTGCAAACCTCACGC.................................................. 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTGTTGCACACCTCATGCA................................................. 23 3 1 1.00 1 1 0 0 0 0 0
.................................................CGTGTGATTTGTGGCAAAGTGA....................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................CCCTTGTTGCAAACCTCACGTTT................................................ 23 3 1 1.00 1 0 0 1 0 0 0
......................................................................................CCCCTCGTTGCAAACCTCACCC.................................................. 22 2 1 1.00 1 0 0 0 0 1 0
..................................................GTGTGATTTGTGGCAAAGGG........................................................................................ 20 1 1 1.00 1 0 0 0 0 1 0
.........................GAAAGGTGTACTGGACATTTTGGGT............................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTCCCGC.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
......................................................................................TCCCTTGTTGCAAACCGCACG................................................... 21 2 1 1.00 1 0 0 0 0 1 0
..........................................................................................TTCTTGCAAACCTCACGC.................................................. 18 1 1 1.00 1 1 0 0 0 0 0
...............................TGGACTGGACATTTTGGGT............................................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
..................................................GTGTGGTTTGTGTCAAAGTG........................................................................................ 20 2 1 1.00 1 0 0 0 0 1 0
......................................................................................CCCCTTGTTGCAAATCTCAC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
......................................................................................TCACTTGTTGCAAACCTCACGC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCCTGTTGCAAACCTCAC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGATTAGTGGCAAAGTGAT...................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAAACTCACGT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCTTATTCCCAACCTCACGC.................................................. 22 3 1 1.00 1 0 0 0 0 1 0
......................................................................................CCCCTTGTTGCAAACCTCACGCTC................................................ 24 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CTGTTGCAAACCTCACGC.................................................. 18 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGATTTGTGACAAAGTGATAGGTA................................................................................. 27 1 1 1.00 1 0 0 0 1 0 0
..................................................GTGTGATTTGTGGCAAAGTGCTT..................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
................................................................AAAGGGAAGGGTATTTGATCA......................................................................... 21 3 2 1.00 2 0 1 0 1 0 0
......................................................................................CCCATTGATACAAACCTCACGC.................................................. 22 3 1 1.00 1 0 0 0 0 0 1
......................................................................................CCCCTTGTTGCAAAACCCACGC.................................................. 22 2 1 1.00 1 0 0 0 0 1 0
...................................................................................GCCCCCCTTGTTGCAAACCTCACG................................................... 24 3 1 1.00 1 0 1 0 0 0 0
........................................................................................TCTTGTTGCAAACCTCACGC.................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................CACTTGTTGCAAACCTCACG................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................GCCCCTTGCTGCAAACCTCACGT.................................................. 23 3 1 1.00 1 0 1 0 0 0 0
......................................................................................CCACTCGTTGCAAACCTCACG................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..................................................GTGTGATTTGTGGGAAAGTGA....................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
......................................................................................CCCCTGGGTGCAAACCTCACGC.................................................. 22 2 1 1.00 1 0 0 0 0 1 0
..................................................GTGTGATTTGTGCCAAAGTGA....................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
......................................................................................CACTTTGTTGCAAACCTCACGC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
........................................................................................CCTTGTTGGAAACCTCACGC.................................................. 20 1 1 1.00 1 0 1 0 0 0 0
......................................................................................CCCCTTGTTGCAAACCTAACGC.................................................. 22 1 1 1.00 1 0 0 0 0 1 0
......................................................................................CCCCTTGTTGAAAACCGCACGA.................................................. 22 3 1 1.00 1 1 0 0 0 0 0
......................................................................................CCCCATGTTGCAAACCTCACGC.................................................. 22 1 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

CCCCAAAATTACCTTAGTCATTCACCTTTCCACATGACCTGTAAAACCCACACACTAAACACCGTTTCACTATCCATAAACTAGTAGGGGAACAACGTTTGGAGTGCGGGTTCCACGAAAGGTTGCCGTTGTATAGTCGTTCCTTCTGATTCTAATTT

***********************************.(((((((((((((((((...((((((((((...(((.(((.....))))))...))))))))))...)))))))))))))...))))***********************************
Read size # Mismatch Hit Count Total Norm Total V055

head

M044

female body

V105

male body
V106

head

............................................................................................................GGTTGCACGACAGGTTGCCGC............................. 21 3 1 1.00 1 0 1 0 0
.........................................................................................................GCGGGTTACACGAAAGGTT.................................. 19 1 1 1.00 1 1 0 0 0
........................................................................................................TGCGGGTTCCATGCAAGGT................................... 19 2 1 1.00 1 1 0 0 0
.........................................................................................................GCGAGTTCCACGCAAGGTT.................................. 19 2 5 0.20 1 1 0 0 0
.......................................................................................................GGGCGGCTTCCACGAAATGTT.................................. 21 3 5 0.20 1 0 0 1 0
..........................................................................................................CGGCTTCCACGAAATGTTA................................. 19 3 20 0.10 2 0 0 0 2
..........................................................................................................CGAGTTCCACGAAAGGTC.................................. 18 2 10 0.10 1 1 0 0 0
........................................................................................................GGCGGCTTCCACGAAATGT................................... 19 3 15 0.07 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:2579681-2579838 + dan_27 confident GGGGT-TTTAAT-----------------G-G------------AAT-------------------------C--------AG--TAAGTGGAA-------------------------------------------AGGT-GTACTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATAGGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--CAAGGTGC-TTTCC-AA----CGGC---AACATATCAGCAA---GG-------------------A-----A-----------------------GA---CT---AAGA-----------------TTAAA
droBip1 scf7180000396759:1640696-1640860 + GAGGT-CTCTAA-----------------G-G------------GTT-------------------------G--------AA--T-AGTGAAC-----AGG----TTT-------------------------------T-TTACTGGACATTTTGGGTGTGTGATTTGTGGCAATGTGATAGGTATTTGAT--AATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TATCC-ATAT---AGC---AACGTT-----ATTAA-G-------------------------G--TCACC---------AAAGT--GAAT--------GA-----------------TTTAA
droKik1 scf7180000302367:405212-405372 + AAGGATT---------------TATTCT-G-AG------------CT-GA-----AA---------T-------------C---------------------TTGG-CATTTGTGA----------------CTA-----T-CAAGTGGGCATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGTATTTGAT--GATCCCCTTGTTGCAAACCTCACGCC--AAAGATGGAATCCT-AT----CCAC---ATC--------AA---GG------AAGTGCATCC----------------------------------------------A-----------------GTGAA
droFic1 scf7180000453809:442541-442698 - AAAGATGTTTAT-----------------A-A------------AAT-------------------------A--------AT--T-GGTGTAG-----GGG----ATATT---------------------------AAAGTATCTGGGCGTTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGG-ATCCC-ACAT---AAC---ATC--------AA----------------------ATG-----A-------------AAT-----AA------------GC----T-------------GAAG
droEle1 scf7180000491214:3580534-3580720 - AAAGATC---------------T--GTTTA-A------------GAT-------------------------C--------AG--T----TTGCACACGAGG----ATTTT---------------------------CCG-GTTCAGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-GACCT-ATGA---AAC---AACATT-----AGTTAGAGTGATGTATTG-GTGCTTTG-----C-------------TCA-----AAGA---CT-----TT-----------------TTAAA
droRho1 scf7180000779932:485522-485692 - AAATT---------------TCT--AAAGA-A------------TAT-------------------------C--------AG--T----GAAC-----AAATTGGATTGT---------------------------CCG-ACTCTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-GTCCC-ACAA---AAC---AACATT-----AATTAAA-----------------------------GTGG-------------T--AAATGTT---------------ATAT-----TTAAC
droBia1 scf7180000302292:862269-862426 - AAGGATA---------------T--GGATA-CGATTGAAAAAAATGT---CTTCA--------A------C-------------------------------------TCT---------------------------TCA-GTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-GTCCG-TT----AAAC---ATCAC-----CAA----------------------ACG---------------------------A-------A-----TA-----------------TCAAA
droTak1 scf7180000415260:195620-195781 + AGAGATCTCAA--------------------------------------------TATCTC-----------AATAGGATTTGAAT-AAATA-----------------T---------------------------AGCA-GTTCAGGACATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-ATCCG-AA----ATAC---AAC-----GCCAA----------------------ATG-----A-----------------------------T-----ATTCATA------------GTGAC
droEug1 scf7180000409462:417366-417522 + AAAAT-ATTAATTTTATAAATCC--GAATA-AATT--------------------------------------------------------------------------CC---------------------------TCG-GCAATGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGATGA-GTTCC-AT----AAAC---AACCCG-----AATAG-G-------------------------A--AAAGG-------------C--AAGT------------------------------GA
dm3 chr2R:8046348-8046509 - dme-mir-988 Known_mirbase ATAAA--------------GTTG--GAACT-GGTTTCAAAAGAACAT---AGTTG--------A------C------------------------------------------------------------------GGCG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TCTGCGAA----ATAC---A-C----AGTG---------------------------GTATGGAAAAAA------------------------------A----A-------------GGAA
droSim2 2r:8750748-8750921 - dsi-mir-988 Known_mirbase ATAA---------------GTTT--GAACA-AGCTACTAGAGAACAT---TTTTG--------A------T------------------------------------------------------------------GGCG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TCTGAGAA----ATAC---A-C----AGTG---------------------------ATATGAAACAAA------------------------------A----AGGAATATAGAACCCCTT
droSec2 scaffold_1:5591393-5591566 - dse_24 confident ATAA---------------GTTT--GAACA-AGCTGCTAGAGAACAT---TTTTG--------A------T------------------------------------------------------------------GGCG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TCTGCGAA----ATAC---A-C----AGTG---------------------------TTTTGGAACAAA------------------------------A----AGGAATATAAAACCCCTT
droYak3 2R:8904820-8904990 + dya_25 confident ATAA---------------GTCT--GAACA-AGCTTCTAAATAACAT---TTTTC--------A------T------------------------------------------------------------------GGCG-TTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGA-CCTGCGAA----ATAC---A-C----AGGG---------------------------ATATGTAAAAAAG-------------A--CAGTGCT-----TT-----------------TTAAG
droEre2 scaffold_4845:17747718-17747887 + der_31 confident AAGAT-C---------------T--AAACA-AGCTTCAGAAAAACAT---ATTTG--------A------T------------------------------------------------------------------GACG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGA-CCTGCGAA----ATAC---A-C----AGTG---------------------------TTATGGAAAAAAG-------------A--AAGTGCT-----CT-----------------TCAAG
dp5 3:405609-405799 - dps-mir-988 Known_mirbase AGAA---------------GCTA--GA-TA-AG-------AAAAAGT---TTTTATATCCCGGATAA-------------C---------------------TGGG-TATCCAGGAATC-------------------CAG-ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGA-ATCCC-ACAC--CTAC---A-C----TCTCAT----------ATAATG-ATCATGTG-----A-------------ACG-----AA------------AA----C-------------AAAA
droPer2 scaffold_2:590047-590238 - dpe_339 confident AGAA---------------GCTA--GA-TA-AG-------AA--AAAAGTTGTTATATCCCGGATAA-------------C---------------------TGGG-TATCCAGGAATC-------------------CAG-ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGA-ATCCC-ACAC--CTAC---A-C----TCTCAG----------ATAATG-ATCATGTG-----A-------------ACG-----AA------------AA----C-------------AAAA
droWil2 scf2_1100000004954:3254332-3254505 + dwi_37 confident AGTA---------------GAA---------AGATTCTA--------------AATATCTT-----------AAGTACATTTGTTT-AGTTAAA-------------------------------------------ACGA-ATTGTGGGCATTTCGGGCGTGTGATTTGTAGCAAAGTGATATGTACTTGAT--AATCCCCTTGTTGCAAACCTCACGCCGGAAAGATGT-CTCC--AA----ATAC---ATC--------AG----------------------TCGATATCCAGAA----------------T--CAG---------TT----T-------------GCAA
droVir3 scaffold_12875:19840338-19840489 + dvi-mir-988 Known_mirbase GTGAT-T---------------TATGCACA-G-------------AT-CA-----TG------------------------------------------------------------TCCAGAGTGTGT--------AATA-TATCTGCGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC-TTGGATTCCATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGG-CGC-----ATTTAACC---AGCAAT-----AT--------------------------------------------------------------------------------AAAGATTCAT
droMoj3 scaffold_6496:6364089-6364252 - dmo_36 confident AGAGC------------------------AGAGCCTTT------C-----------ATTTTGGATAAAGACTA-----------------TT---------------------------CGGAGTGTTATATCTATCATGTGTATTTGCGCATTTTGGTCGTGTGATTTGTGGCAAAGTGATGAGC-TATGATTCCATCCCCTTGTTGCAAACCTCACGCT--GAAGGTGA-CGC-----AT---AGCAGCAAC--------A--------------------------------------------------------------------A-----------------TTGAA
droGri2 scaffold_15245:18189013-18189192 + dgr_15 confident AGCGT----------------TT--GTTTC-TTCTTTTAAAGCATAT---T------------------------------AA--A----TT---------------------------CCGAGTGT----------GGTA-TTTCTGTGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC--TTGATTCCATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGG-CGC-----ATCTAAGC---AACAAT-----AT----T-------------------------A--ATATACAAGTTTCCACTA--------TTATT--AA-----------------T--TA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGGGT-TTTAAT-----------------G-G------------AAT-------------------------C--------AG--TAAGTGGAA-------------------------------------------AGGT-GTACTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATAGGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--CAAGGTGC-TTTCC-AA----CGGC---AACATATCAGCAA---GG-------------------A-----A-----------------------GA---CT---AAGA-----------------TTAAASizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................2217701.007701260048186410514100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2112345.00234510907058414932285
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................211610.006101193315355115
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221342.003421157111513361
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................221318.00318758214100119
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211284.00284243361400
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201196.00196491283538
................................................................................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................201167.00167230097461
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201113.001139980402
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................231105.0010541590203
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................23175.007511585001
................................................................................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................................19175.007590114816
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19173.007329422000
............................................................................................................................................T-GTACTGGACATTTTGGGT..................................................................................................................................................................................................19173.007315133744
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................20154.0054151061418
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................23149.0049131001619
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................21146.0046102041020
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................23145.00459350001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22138.003819170101
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--A..................................................................................................................................24134.00340340000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................23132.00325200520
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20128.002811170000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19128.00287170112
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18125.00259160000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................23119.00191520002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................24117.00171321001
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21115.00151010310
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18113.0013750001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................22111.00111000001
................................................................................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................................18110.0010200224
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................2219.009301023
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAGGT........................................................................................................................................................................2619.009100080
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2219.009710100
.................................................................................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................................1918.008300014
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................2118.008251000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGC.............................................................................................................................................................................2118.008000161
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................1918.008620000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................2117.007110005
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................2317.007200014
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2416.006060000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2216.006230001
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2216.006510000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................................2116.006100041
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--A..................................................................................................................................2415.005041000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................1915.005410000
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................2114.004000202
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAC............................................................................................................................................................................2214.004200002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................2114.004030001
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGT......................................................................................................................................1914.004121000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2314.004310000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2214.004100021
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2214.004040000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACAT......................................................................................................................................2213.003100011
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAG..........................................................................................................................................................................2413.003100020
...........................................................................................................................................GT-GTACTGGACATTTTGGGT..................................................................................................................................................................................................2013.003010002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................2013.003120000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2213.003300000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................................2013.003100011
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................2213.003200001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2313.003210000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TT.................................................................................................................................2512.002200000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGTT--...................................................................................................................................2212.002200000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................................2312.002110000
............................................................................................................................................T-GTACTGGACATTTTGGGC..................................................................................................................................................................................................1912.002020000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2412.002200000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2312.002110000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAGGTA.......................................................................................................................................................................2712.002100010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--A..................................................................................................................................2312.002011000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................................2012.002020000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................2212.002110000
..................................................................................................................................................................GTGATTTGTGGCAAAGTGA.............................................................................................................................................................................1912.002100010
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................................2312.002000002
..............................................................................................................................................GTACTGGACATTTTGGGT..................................................................................................................................................................................................1812.002000002
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAGG.........................................................................................................................................................................2512.002000020
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGG.............................................................................................................................................................................2121.503200010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--AT.................................................................................................................................2511.001010000
..........................................................................................................................................................................................ATTTGAT--CATCCCCTTGTTGCAAACC............................................................................................................................................2611.001010000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGTT--T..................................................................................................................................2311.001000001
...........................................................................................GAA-------------------------------------------AGGT-GTACTGGACATTTTGGGT..................................................................................................................................................................................................2511.001010000
droBip1
GAGGT-CTCTAA-----------------G-G------------GTT-------------------------G--------AA--T-AGTGAAC-----AGG----TTT-------------------------------T-TTACTGGACATTTTGGGTGTGTGATTTGTGGCAATGTGATAGGTATTTGAT--AATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TATCC-ATAT---AGC---AACGTT-----ATTAA-G-------------------------G--TCACC---------AAAGT--GAAT--------GA-----------------TTTAASizeHit CountTotal NormTotal
No Reads
droKik1
AAGGATT---------------TATTCT-G-AG------------CT-GA-----AA---------T-------------C---------------------TTGG-CATTTGTGA----------------CTA-----T-CAAGTGGGCATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGTATTTGAT--GATCCCCTTGTTGCAAACCTCACGCC--AAAGATGGAATCCT-AT----CCAC---ATC--------AA---GG------AAGTGCATCC----------------------------------------------A-----------------GTGAASizeHit CountTotal NormTotal
No Reads
droFic1
AAAGATGTTTAT-----------------A-A------------AAT-------------------------A--------AT--T-GGTGTAG-----GGG----ATATT---------------------------AAAGTATCTGGGCGTTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGG-ATCCC-ACAT---AAC---ATC--------AA----------------------ATG-----A-------------AAT-----AA------------GC----T-------------GAAGSizeHit CountTotal NormTotal
No Reads
droEle1
AAAGATC---------------T--GTTTA-A------------GAT-------------------------C--------AG--T----TTGCACACGAGG----ATTTT---------------------------CCG-GTTCAGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-GACCT-ATGA---AAC---AACATT-----AGTTAGAGTGATGTATTG-GTGCTTTG-----C-------------TCA-----AAGA---CT-----TT-----------------TTAAASizeHit CountTotal NormTotal
No Reads
droRho1
AAATT---------------TCT--AAAGA-A------------TAT-------------------------C--------AG--T----GAAC-----AAATTGGATTGT---------------------------CCG-ACTCTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-GTCCC-ACAA---AAC---AACATT-----AATTAAA-----------------------------GTGG-------------T--AAATGTT---------------ATAT-----TTAACSizeHit CountTotal NormTotal
No Reads
droBia1
AAGGATA---------------T--GGATA-CGATTGAAAAAAATGT---CTTCA--------A------C-------------------------------------TCT---------------------------TCA-GTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-GTCCG-TT----AAAC---ATCAC-----CAA----------------------ACG---------------------------A-------A-----TA-----------------TCAAASizeHit CountTotal NormTotal
No Reads
droTak1
AGAGATCTCAA--------------------------------------------TATCTC-----------AATAGGATTTGAAT-AAATA-----------------T---------------------------AGCA-GTTCAGGACATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-ATCCG-AA----ATAC---AAC-----GCCAA----------------------ATG-----A-----------------------------T-----ATTCATA------------GTGACSizeHit CountTotal NormTotal
No Reads
droEug1
AAAAT-ATTAATTTTATAAATCC--GAATA-AATT--------------------------------------------------------------------------CC---------------------------TCG-GCAATGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGATGA-GTTCC-AT----AAAC---AACCCG-----AATAG-G-------------------------A--AAAGG-------------C--AAGT------------------------------GASizeHit CountTotal NormTotal
No Reads
dm3
ATAAA--------------GTTG--GAACT-GGTTTCAAAAGAACAT---AGTTG--------A------C------------------------------------------------------------------GGCG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TCTGCGAA----ATAC---A-C----AGTG---------------------------GTATGGAAAAAA------------------------------A----A-------------GGAASizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................211383318.003833180000812391525575194723262538021200100125443742041912019481751200341178309338862546744873117967293206169307567731293112600181040000000000000000092897670978034312285381364151717998332684335212813186711149211568164214785537855131636052651950818672253451698036004708266416698312334323284993111702310401701268511220633029210233935621024916354938524634437026724040331644314224872377989219291294013237234661365218720290925512584910168115622032591941996009801011290000074113001100215244176100555526541941612295108238144219471248422042194693738411514321800001251337220257469109195317832504438392524005291057052309791214023491822836838128688038511771023115870352526001125112294617330119299128553593226543841829721117421239940516654223764252913831243795835986103351168839466211989203174295274817549724735849230313501067425213310222075887268521030
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................221313658.003136582000148464973175112411454611362645912212044491522562311157059142260228631126215169511704417334413925191167137158333356244410009134230000000000000000043742732438241411265231683364910133318628859233422851032225138221171915195584631094248647642466065533365331493525882852358998123049414931289621291164060311242117311438588532616644821751891821087413357932618728044617120225220214291811161334140932631226585020285128819462611562936364370898236524737422730295592477549102203311613011557620000017915211567531420632988968131375389542981010522298091595241691818248223710000184173121342042548684951445133263394155142239152335270774521193396553103982842245613631751121391730022295041051757381062573659524921023595922023815814514339159011923174501729361965180483463040342024991333484037112683525354713242723132040718382856239768858982502887276000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................221103296.001032960000422110000101000021561139710183635252815414911102514519756701952637176365108401924301504900000000000000000120142901228101476346312117523136125103744447830468286987154208206359111232332931425131120610240325601596451437303191341178877553011692611543098214812778254776834203928311315632642360236438199518058432732075747095731252219326586413563408131706153201722423111883031735712010121892351427240314728214384931708321014988509241640116230204972100783774740118391534901554543310826758854320215212724011392601844918612602451387394656338292251167291491910318517901130140766162060266211351931211129130207510627811252639412043512111201125411955516627021995159629132805313976884011565107420674891131272792836749557576217075175291286181430
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................21172974.007297400008121010326012110125921861744529312651024101376141243711155289586483211564560197370000000000000000056735388549462244200380311080269401117310030185710416150176213305461488191113558321180700360136461022301020010707177669393425849178661454077936372182785376153147824613245015919801272389478734113521997702215612887280141220387043134013406511151231769868539546144355248524022191190401186640118946036726576679619624811000281710362313543164891101265745366231224209145444821125337614105222495118514442013336383638355351675341411658223412561048882130450047355475789815316112428518312443286376153186696216157267344136340015811180109417071383814497179845589528529389036916320521827376840149384423290
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................22132129.003212900005520152521510012001812451561415500000000162416423732341814343421323767191300000000000000000000000272719207275182928444223244325411739458710174110618829871107759610112475156125570410000110201200000000604705434243783756158118555293450000010347439632598120501212361552340114337069117501204120059183701000434700215010595698249815521289336209476331405414129113272000019172838331023614327516626116727522920121123135192826358737100651035544372173130512215342973289117314934411064298446677492275784127337441043312553902565382518734731839110160815963701012894592145285803582897115739721237711500
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................20130958.0030958000087933416041222410127141102244412131020283653112112222828119248400017310000000000000000025031118123738914513111810410299202814144626561461972763391182448382173228952231964349509352547334181940610000000727500010000003201181872314101019613141101001612691114129315701115561101213549369330116060216149161320060370100001000000775129542443911102159542211591128958793348155231245000011804712374312415201421441630622546126189132563627534029502891641653959562746152167692415401945907013335552521171214252241722816351326510141292128268650
................................................................................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................20123997.00239970000400000000324610050230641109362751636788483711111721910738252621113140038060000000000000000011935250323133011106153761100271911819314411230011412040712010002238126672061011429167181030172425129143492651576419157113798891222930901082511260813201462049276109105531803201115171029001301500610047516000242152112376025493211711584232296491431471200001042015356625864620312826239286084370106458281401153379147539104414224820733060326194831420623839931425442279559142018101222124710204315020637821470109141013379193184326114139810842115749058971194137661702152873746460
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................23110031.001003100000000000100000000301000044902102411020411402416811200170190100000000000000000101201002358204207510000000552121300003012400000701112100120200003632161122962511714202715711505540101680815506100451310801004113126315313184411300517031000061391013113713339771291684986101592326710100550902126611803413381021142279843293221730227820244132410130402181339792721242631532192622182481227127391402164511197813493131122861776443201711117991201064165152153224110292462135120881343610
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................1917609.007609000000000000000001003201420150248510421002011112002502100028311000000000000000007258495882732116285342878826275106735641021291141588989620464549614734621454608001000103237000000000022100241324015701000183525061342081018741021910270052720672078100103000000000000003018207610930155191072441325000052114223002329112241211200446611432011122902314561208021231534109022000100912111004136472700912100422170
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................2114542.00454200001940454131821304004014001220000003713427113012233910610000000000000000000000010108532111495933311341249811823329368129979112632110064010015040510000000020145042972892101220011008821018110622188442132225110131065202310000000000000000000102740147012519110044817145925961496345000024602814201924871115509331312559111327101774241059191696104255608321582007031205020084342751344110222320121000314312160
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................2013488.00348800009401141321810200065010010000000048101141782083351014102000000000000000000000005136503362124027113111068200371090851845513180110141701100010101014000000010031404448646371280000006020456032074140278000000324231000200000000200000004221013011831281065919613321720552231632000012012121816131919668072084212684114314141411948169196330185186061830331110500063415141300101945313262263329005104212111313340
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................2312980.002980000000010000000000000010000000000000000220410030023000000000000000000000000015150407120101210110100000020250600211000100000502020001000000005813057330125713220200510037028130481322000000000001100000000000471003000234781414715385556272144121820600001002147199142093711124581237660724289111160011130013615832443326414510212588879255348753933233022765710810657311674250901440763418591261221539930
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2112322.0023220000000000000000000001310041000000026112011101123531121000010000000000000000004242100001250012002320001013820140000010800101120401000000210500344239115354710011201170220859070116311090270020201432120001043000003100000002913651635403124925749138113311000005200321188241450441764111354114183224112414114543486754124191611151017272316141110183165512301532912524204826102621519839373419564195125101691013671
................................................................................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................................1912100.002100000000000000000020002020040400000000010000201000214020002000000000000000000054450000001000000000000002000220000000003000000100020108120000021520425022730000171241008007210917602200017520814020250312030030003241311010010005161381148144541051292760000013103656107031022307556615901023471116267020000006752315323121284892125313311287346268222261423123423124108229243221391969101881181214370
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................2111651.00165100000000010002000000000600400000000011001501103201012000000000000000000000002435041912529734202101334000013183241288103153010102950110000000212400000000000110001212300010000091100230001003001010100032013000000000000000000000000021010113351041523242615122200000003007641341150207032021000010014130716958141421210121141101600301000026010010000000000000011000460
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................2211568.001568000000010000000000000100001100000021130002111014354150203400000000000000000000000000300100100000100100010042300000000003201002800020000000000031146030327387452401000000550111221501040000103031100010330000312002000611151031372111494436114521001700003105114960323304340320441108513729462422012336408101553489102618851621938939412411272504254224485532183011610106811575767430
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................2211285.0012850000125481173323103300010410000000000010010006000006160100000000000000000000000454519045824263082153824001314437435785109361352061000212020220000000000000101110110000000001032008120412510208212400130321020100102500000010000000010000474523235970427340041010001010021501100110000002010022646119201121244580500000210000012100110134200010100000101001000001200
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--TC.................................................................................................................................2511082.0010820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901181000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................G-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................1911020.00102000000000000000000000010000000000000021040010111000120000000000000000000000000000000000110000000100000001811101000100011000000000000000000000301402323114131000003000000100000000000000100000000000000000000000030001142310227599214149700100000102204147011013363325491615414121005000000200424063104421241901564112521402101765544177312331318142115534454521581126150
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................211887.008870000528332000120000000002800000000000311020111000003200000000000000000000000000310144222422120022405277015125565960621220126081900001000000000000000000000000012100100000000205031210010320000010000007000000000150000000000000000000021401581832123781260000100000221001101033030010011012010042514643250200001200000203001000013100000101100000000001000020
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................231877.00877000000010000000010000001000000000000100000002001000101000000000000000000000001601474010718110215914111110086222142023257405631602000010102013000000000000200000000001200000000000540200101020411000000026001000000100000002000000000210046202722713559424201134000100000211100001000000120001101051000170419460020200010000201101010166001202100302300120300001010
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................221859.008590000200111100100000000050010000000001101013100011041000000000000000000000000011011514136221101142128600052137615427913120284000000000000000000000000000001211010000000000000300000102101000000000010000000000000000010000002004810464523235960453220021600001000001100000000100200502002000321685958482120100001000101400000102012000100000000000011031030
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................231856.00856000000002100000140000001500000000000000001010011100000000000000000000000000002333200161108261185025418005193411316234742901416180110001010101000000000000201000010001000000000001001500003204043730100018000100000100000001000000000100129232317321923125212100000010001317021101000320032003235841036032121801400000100011001002310622000025401023200000000212850
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................231782.0078200000012301100007000000200000000000000000100000000000000552160000000000000000011111215392464103113032130024001171727570150111002000000000000010000000000001220102001000000000001100000011000020000000010000000000000000000000002100672029248427411717897000010011401210102002002100121110521100000040100001010040001011010200163100311000111000000000110000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................201689.0068900000000000003004200000500000000000001001102000102000000000000000000000000003202010020103002003223000001242532650201010010000000000101000000001000000201101000000032071002303001153011121040001001010000000000000000000161010044101616292436217345150000001100013010000110110030000202223263113352310101000100000002020000640200000102001000200000031240
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................221687.0068700000000000000000000100000000000001000000110000001010000000000000000000000003122010003232004000000000010000090110100000001000000000000010000410111101110214202222360000001210234025001200000000010210000000000013000000832002018513920136130352010010000101011000200001203422029544210413010025115351239201101111290500010141684689414162495110330011321620
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................181615.006150000000000000000520001010000000101000000000100000000000022100000000000000000911671107314221103202585003600576512645721214116603010000001900004800000000000000000000000000000000020010010002100000003000000000020000000000000201001040304021013100000000000000010100000400101100221435000000020800000100000000000000030000000000000000000000000110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................211610.006100000100000000300000000050000000000011000021100010125020000000000000000000000011125218000112302150100000010810244223000015000000000010000000000000020001230212000000000013051210000100000000000003001300000010000000000000000000020986117151210000000000101014011022045110120001110015401356210141095130420200131000204020040000100200000000300101000003100
...........................................................................................................................................CG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................201500.00500000000000001000000000000000000000000000300220010010002400000000000000000000000000030000200020020000000004210010000000100000010000000010100200110013421000210000000020000000000000000000001000000000000000000000000020030016211823213003000000000122100003023200022212020201100100000037813001121001405206130601301824156102419110206192261457032913330
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................................211491.00491000000000000000000000000000000000000100010100000110100000000000000000000000001100000000020050010100000232400000000204100000000010001100000000000130210100300010010000562022200401440300000001000001000000000000000050200010226211301520000000003351030023000000432020651252020000000008163481313200160000021113120320737541473711052310511513860
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................201476.0047600000000000000000000000100200000000001000000000000000000000000000000000000001200020000510000000000000104420000000000000000010003200000000000000000010100000131100600032011013210507000120010110001000000001010000102500400240202081233000030122211226113401022121240011350222702110028431791492343615305024721313253434513104352327402137022210
................................................................................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................................181465.004650000000000000000000010000101000000000000000001000002000010000000000000000000108390000003300310051000001100100300000001000000000000004200000100100010403000000132500200170231014005200301001000000000000111361000000006000131015401112715300000111011200101010010001314111523221130000000101513211136817002101041433001302520012003002035330113130000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................201464.0046400000001000002000000000200000000000000000000000000000000000000000000000000004233000100292150020111200000061681464122000034000000000000000000000000000000000000000000003000300300001000000000014100000000000000000000000000000100025010302411400000010000100000010000100000000000100000000000000000000000000000010000000000000000001000100000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................231415.004150000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000100000000110230000000000000000000000002000001021000000010000000000001000000200020003000000001010100001000000010040000601200621210332214000020000213200109222101103152031500500000000008113504462103126030190110019116625936244521131771040612126110
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................191410.0041000000000000000000000000000000000000120000010000000110000000000000000000000001410030003561011001100011402173628112101000000000000000000000000000000000101322000000003030070100000202001100020000100200001000000000000000005000119118178271342720000101000103000001010002001001000211193800014150200100001000000100000081200000000000100000010011000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................211404.0040400000001001000000000110000200000000000010100121113211000000000000000000000000000000000100000001000000006250010000000000000000000000000000001010020120510600000010023001000000000002000050000100000035000000000000010110011134523711301000000000012120110300100100121011101101731619646214340001001000010031201101914123609204034123100011922190
..............................................................................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................................181401.004010000000000000000000000000000000000003014000100000000100000000000000000000000000000001020000000000000000238002001010000000000000000000000000002012102001601000000091000000000100000200000000101000000210000000000001040000370013000500500000231021320011035041543322003313012000000002350300003200222043607170121223717030502300310310011442010
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................231379.00379000010000000000000000000000000000000020000210000001000000000000000000000000001100000101000100000000000010200000000001000001100011000000000000000022111000001000300000010200020000010000103202100000110000001000000020140212621165513100200000100021042000000000000215211273212180442233461005443401501413216606467269733916620034452202112100
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................211367.0036700000000000000002100000300010000000010001110000000000000000000000000000000001200010020200000000020000001440000010200100000000000010000000000000000002000000000005000000000100200140000000010000000000000000000000010010006926172062192321011112000000000101000000000000000000000010000000011000000000000000010000000150600000000000000001000100040
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................191356.003560000000000000000000011020001000000010000100000001000000000000000000000000000110000053011102000012000100357180100113000000000000001000000000010160235515217000000000000210111142400300000001000100000000000000000000552110040201303014100001000001000000010012102000000234253316012212903101201302014002000011558152201300441001010000011010
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................231346.003460000001021000000000000030010000000000000000000000200000000000000000000000000010015081027401200204200339019132022622011630000000000000000000000000000001000000000000000000000000011010010003000100000000000000000000000000002002471213261217141023500001000001010002000000001000001110202000001121000000000000100000000010000000000000000010000000000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................181323.0032300000000000000000000000000000000000001001000001000100000000000000000000000004925000002630010000110020011391041600001000000000000000000100000022106074673000100000000008100010022200100000200001000000000000000000000753020042210011100100000000000000000120100000101000111141926145255121620010033000000201010044222110210000000000100120120
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGC.............................................................................................................................................................................211320.00320000010000000000000000000000000000000000002300010235000000000000000000000000000000000000000120000000000011000000000001300000000030001000000002210001000203100010001000120010002000400010000000010000000100000000000512000000000102000000000000115710000100110200030001653141130000001872620061010052822274014430161622301420200111001114230
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................251311.0031100000000000000000000003000000000000300000040003022011000301000000000000000000000000001000000000000000000000000000030000000000000000000000010410010212010020000000000000000000000000000000000000000000000000400000002020011220211100000000001000000000000000000000001003000000000000000200002300021011010020002145480100502500202404114102100
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................221293.0029300000000000000000000000000000000000200000000000120000000010000000000000000002000000000010000000000000100000000000000000000000000000000000000010000010020000001010000000000000001000100001000000000000000000200000000411000020514141001000000001012102102200113003102101451121701061859402652631313003282742050564465215823008302004249100
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................................221249.002490000000000000000000000000000000000000000000000000030000000000000000000000000010000000000000100000000000010000000010000000010000000000000000000000000000000000000000000301000010011200010000000050000000000000000000720111020103212030100000000000101010211000001242001251003010000001871741425600021324131700170374403631230322010120310320
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................201240.002400000200000010000000010029001000000000000000200000000000000000000000000000000020010407021101011010380010101694000000000000000000000000000000000000000000000000000000900004000010000000000000000000000010000000000000000000006184010335121001100000000000000000100000000000000000002711412100000000010000100000000010011000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................231218.0021800000000000002000100000120000000000000000010000001000000000000000000000000000100210000171000002112000100917151236000030001000000000100000000000020000000000000000000400001100002100001300000042010000100000000000000002000001410101314300110000000021023130000000310000001030110010102100400010010010000100100103200000101010000210000011450
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................221214.002140000000000000000000000000000100000000100000000000000000010000000000000000000112100000010000000100000000234110100002000000000000000000000000000000000100020000000000000000000000112000000000000000000000000000000000001000401210544161231542000000000000000000000000001100000101000000000000001101110001001000000140000000000100000100000000100
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................191210.0021000000000000000000000000000100000000000000000010001100000000000000000000000001105000000410000001030000001010195400000200000000000101000000000000000001100001000000000610102000011000010000000120000000000000000000000001202000131232156147214100000000010000020000100000001001010100140012010100000000000000000000012000000100000100000100000010
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAATC..........................................................................................................................................................................241204.00204000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013271000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAT--C..................................................................................................................................241177.00177000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014828000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................................231150.0015000000000000000000000000000000000000000000000000000100000000000000000000000001101000000100000000000000000000000000000000000000000000010000000010000000000100000020000000010000100010000000000001000000000000000000000100002010000213111919000100000200000100000200001000101010000000011031210003000401300190010024024610411112141110112130
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................221150.00150000000000000000000000000000000000000000000000000000000000000000000000000000011010020017310200102100001043320001000000000000000001000000000000000000000000000000200000100020112101330010004000000000000000000000000000000017222961270621000000000010200000010000000000010000000000000000000110100000000000000131000100000100000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................221140.001400000000000000100100000000000000000000000000000010010000000000000000000000000030221010003100101001000080043300001010000000000000000000000000001000000000010000000100010100021000042300004040000000000000000000000001000000120022250003000000010000100001000000001000001110102510212401221000110100000100101210000000200000000000000011220
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................241128.0012800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110020000000000000000000000000000200011000050010000000000000000000000000000010000000000000000000000020020001113611300001100000000000000000000000001000122211001010000000210000210121012603000031021185111431100000000011030
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAG............................................................................................................................................................................221125.001250000000000000000000000000200000000000000000001000000000000000000000000000000001000000001400000000000200000000000000000000000000000000000000111000100000000100000000000101120040173100000010000100000000000010000001100000000010001210000000000001000000000000000000002100100000000003584235310001211010702300000120012000001100020100010
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAATC........................................................................................................................................................................261120.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................................201118.001180000000000000000000000000000000000000010000000001000000000000000000000000000011000000000000000000000000000000000000000000000000100000000000000000030010000000001000003170200000000000000000000000000000000000000000000200000010000000100000000101920100200540403011002170230000000000303111120100510000010010000200100100002200000001030
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................................211116.001160000000000000000000000000000000000000000000000000000000000000000000000000000011010000043000101001000030215000000000010000000000000000000000011000100000000010001000002100330130105010000000000000000000000000000000000000313863520570000010000000000000001000000100000000000000000000000001000000000000000150010000100000000000000000020
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................................211111.00111000000000000000000000000000000000000100000100000110000000000000000000000000000000000000100010000000001000010100000000000000000010000100000001000000000000000100000200000100000003700000000000010000000000000000000010200000000000030000000000002100100210000000210100111020000000000044301041001300000020060010313411912100010000100220
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCATT.......................................................................................................................................211110.0011000000000100001000000000000100000000000000000000000001000000000000000000000000000000001920001000000003009261754500000300000000000000000000000000000000000000000000000040010000000000000000000000000000000000000000000000000016001002100000000000000000000100000000000000000000010000000100100000000100000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATC.........................................................................................................................................................................251110.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................................211100.001000000000000000000000000000000000000000000002000000000000000000000000000000000000000001014000000011000000612957200001000000000000000000000000001010000000030000000000000000000000000000000001000000000000000000000000000000058335722100100000000000100010000000000000000100000010000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................22195.00950000000000000000000000000000000000000000000000000000000000000000000000000000100100000020000000011000000103503000010000000002000000000000000001000000100000000000000001000000020000100000040000000000000000000000000000100123427263104100000010000020000000000000000000101210000002000000000000000100000000012000000000001000000000200010
..................................................................................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................................20193.0093000000000000000000000000010010000000000000000000000000000000000000000000000000100000000100000001000000002000000000000000000000000001000000100000000002000010000400045000020033110100000010101000000000001002000000200010010231011000100000000000000000000000000000000110000000001000202010141000000100001010000112010510100201000101040
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18183.00830000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000301000000000000000000000000000000000000000101020030000000000000200000000000000000010000000000000000000000000102200100011010120000004000000000000100000000000013131001411031101000010100000000000000191001003000000000000000000200
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................................20178.0078000000000000000000001000001000000000000001000000000000000000000000000000000000100000001000000000000000000400000000000000000000000000000000000000101000000000000000000000110000000100000130100020000000000000000000051000010000010004000000010000000100000100000100000000100030202202010001000000000001000000010322000011000301011021070
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................24178.0078000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001002000000000000000000000000000000000000000000000000000000000001000000000020010222030000000000010001200000000000010000000100040000113100010000021100001202000000041110321201501101310112020
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................22177.00770000000000000000000010020030000000002100010100000100000000000000000000000000000001111010000000000000000109200000001000000000000000000000000000000000010000100000300011000000000000000000000000000000000000000000000010000001010402000000001000000001100000000000000000000000120002001410101101000000000001000000000000000000100100000010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................24174.00740000000000000000000000000000000000000000000000000000000093300000000000000000000000000000000000000000000000100001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000924321573000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000
droSim2
ATAA---------------GTTT--GAACA-AGCTACTAGAGAACAT---TTTTG--------A------T------------------------------------------------------------------GGCG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TCTGAGAA----ATAC---A-C----AGTG---------------------------ATATGAAACAAA------------------------------A----AGGAATATAGAACCCCTTSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2216017.00601745213215334423325498485163312753952145138314
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2115486.00548647080169471148179730717654482662401110213000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................2214981.0049815757525538313321883785453538529721164159000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................2112476.0024761062516173483082451964664561071117156002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................2012028.002028651716366809355870465732727000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2311854.0018542190738110110110000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................2011410.001410521611518635516393215193713245000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................2311053.0010531336214831918147120248111261044000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................191780.00780133172814285113917200000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................181747.00747811027244842119000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................221276.00276371622013595444249511000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221269.002691746100084231412624330000
................................................................................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................................181265.002653196010010023248000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................................191234.002341919245066176151814121000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................211227.00227112067202540475010225000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................221223.00223703100482790363008000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................231192.00192341414100231453265008000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................21185.008550127146111681104000
................................................................................................................................................................GTGTGATTTGTAGCA...................................................................................................................................................................................15181.008100000040195512000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................20170.0070000380363324812000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................22161.006112000044161721410000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................23152.005230100091114120011000
......................................................................................................................................................................................................CCCCTTGTTGCAAACC............................................................................................................................................16142.0042000000001041000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................................21141.0041500000322100028000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................20138.003831013462731007000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................23135.00350000003220100000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................................24135.00350000005513120000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................................22130.0030165400001013000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................................21123.0023183100010000000000
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................23123.002340101034550000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................................25122.002200000070861000000
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................22121.002111000038420011000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................22120.0020100071200000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................23120.002071200021202201000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18119.0019000000140014000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................24118.0018000071100000000000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19117.001700020052015011000
......................................................................................................................................................................................................CCCCTTGTTGCAAAC.............................................................................................................................................15117.0017000000200015000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................24116.001600000011750011000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................21116.001610000035511000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................23116.001631400041102000000
................................................................................................................................................................GTGTGATTTGTAGCAA..................................................................................................................................................................................16115.001500000040434000000
................................................................................................................................................................GTGTGATTTGTAGCAAA.................................................................................................................................................................................17114.001400000024143000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCT...........................................................................................................................................17114.0014000000100013000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................21114.001441016200000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................23114.001432020000000007000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................21114.001441120013001001000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACG.......................................................................................................................................17113.0013000000000012001000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22113.001300021010203310000
............................................................................................................................................................................................................GTTGCAAACCTCACG.......................................................................................................................................15113.0013000000000013000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19112.001201023011112000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................24112.001200400041020100000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................22112.001240000001610000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................................23111.001140300020110000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................2019.00900012002010300000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................1919.00900013400100000000
............................................................................................................................................G-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................1919.00900000000008100000
.....................................................................................................................................................................ATTTGTAGCAAAGTGAT............................................................................................................................................................................1718.00800000000008000000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................1818.00810100000004002000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATAAAA........................................................................................................................................................................2518.00800000001520000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGTA............................................................................................................................................................................2218.00800000001000007000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2017.00700001011013000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAG............................................................................................................................................................................2217.00710000001113000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................................1917.00700021111010000000
...........................................................................................................................................................................................................TGTTGCAAACCTCACG.......................................................................................................................................1616.00600000000015000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................2116.00600020000002200000
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................2416.00600000032100000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2216.00630200000001000000
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................2116.00600000014010000000
....................................................................................................................................................................GATTTGTAGCAAAGTGAT............................................................................................................................................................................1815.00500000000005000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGT...............................................................................................................................................................................1815.00500001100003000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................................1815.00500010400000000000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................................1914.00400000001003000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................................2114.00400020002000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2314.00400001001100100000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCA.........................................................................................................................................2014.00400001300000000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATAT..........................................................................................................................................................................2314.00400000100110001000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................................2314.00420000000020000000
......................................................................................................................................................................TTTGTAGCAAAGTGAT............................................................................................................................................................................1613.00300000000003000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................2013.00300010000110000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2413.00300003000000000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGC.............................................................................................................................................................................2113.00320000010000000000
.....................................................................................................................................................................ATTTGTAGCAAAGTGA.............................................................................................................................................................................1613.00300000000003000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................................1813.00300001200000000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAAAA........................................................................................................................................................................2613.00300000010110000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................2113.00300010001000100000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................2013.00330000000000000000
..........................................................................................................................................GCG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................2113.00300000000003000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................................2013.00302000000000001000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2513.00300000001100010000
................................................................................................................................................................GTGTGATTTGTAGCAAAA................................................................................................................................................................................1813.00300000010020000000
...........................................................................................................................................................................................................TGTTGCAAACCTCACGT......................................................................................................................................1713.00300000000003000000
.............................................................................................................................................................................................................TTGCAAACCTCACGC......................................................................................................................................1512.00200000000002000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTA..............................................................................................................................................................................2012.00200000001000001000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--GT.................................................................................................................................2512.00200000000002000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCT...........................................................................................................................................1812.00200002000000000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................2212.00201000000001000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATGTAT......................................................................................................................................................................2812.00200000000000002000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2312.00210000000100000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACA.......................................................................................................................................2012.00200010000100000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................2112.00200000000110000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAT--T..................................................................................................................................2412.00200000000000002000
.............................................................................................................................................................GGTGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................2312.00200000002000000000
...................................................................................................................................................................TGATTTGTAGCAAAGTGATA...........................................................................................................................................................................2012.00211000000000000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAT..........................................................................................................................................................................2412.00200000100000001000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATGTA.......................................................................................................................................................................2712.00200000001000010000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................2212.00200020000000000000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGT......................................................................................................................................1812.00200000000001001000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATTAA.........................................................................................................................................................................2512.00200000000200000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2212.00220000000000000000
...........................................................................................................................................CG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................2012.00200000000002000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATTC..........................................................................................................................................................................2412.00200000000000002000
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCT...........................................................................................................................................1912.00200000200000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--C..................................................................................................................................2212.00220000000000000000
............................................................................................................................................................................................................GTTGCAAACCTCACGC......................................................................................................................................1612.00200000000002000000
..............................................................................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................................1812.00200000000002000000
............................................................................................................................................................................................................GTTGCAAACCTCACGT......................................................................................................................................1622.00400000000004000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGACT...........................................................................................................................................................................2312.00200100000010000000
................................................................................................................................................................GTGTGATTTGTAGCAAAAA...............................................................................................................................................................................1931.67500000000000005000
................................................................................................................................................................GTGTGATTTGTAGCAAT.................................................................................................................................................................................1721.50300000000120000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCATT.......................................................................................................................................2111.00100000000001000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATGGT.........................................................................................................................................................................2511.00100000000001000000
....................................................................................................................................................................GATTTGTAGCAAAGTGATA...........................................................................................................................................................................1911.00100000000001000000
....................................................................................................................................................................GATTTGTAGCAAAGTGA.............................................................................................................................................................................1711.00100000000001000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--G..................................................................................................................................2211.00100010000000000000
droSec2
ATAA---------------GTTT--GAACA-AGCTGCTAGAGAACAT---TTTTG--------A------T------------------------------------------------------------------GGCG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGA-TCTGCGAA----ATAC---A-C----AGTG---------------------------TTTTGGAACAAA------------------------------A----AGGAATATAAAACCCCTTSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2114137.004137246165675936
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................2213734.003734277547397515
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2211339.001339250588143358
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................211840.0084014931790284
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221685.00685119101114351
................................................................................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................201629.0062912315312341
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211252.002522311614
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201210.0021015412827
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201210.0021018121314
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................231141.0014121662628
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................211107.0010730202532
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................23171.00711830617
................................................................................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................................19157.0057420429
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19154.00541341324
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................22148.00481413156
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................21142.004239012
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................20140.0040118318
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22136.003633201
............................................................................................................................................G-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................19133.0033131910
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................................21129.0029215012
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19120.002018011
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21120.002010244
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................23117.001713112
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................23116.001614011
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................23115.00156207
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20115.001514001
.................................................................................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................................19113.001311101
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22111.00119110
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18111.00118111
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................19110.00109001
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................23110.00102224
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................1819.0099000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2319.0099000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................1919.0097020
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................2318.0080215
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................2118.0087001
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................2218.0086110
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................2216.0062121
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2516.0060411
................................................................................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................................1816.0062004
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2215.0055000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................................2115.0055000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................2214.0043100
..................................................................................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2014.0043001
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2314.0044000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................2114.0043001
..................................................................................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................................1913.0031011
................................................................................................................................................................GTGTGATTTGTAGCAAAGTAT.............................................................................................................................................................................2113.0031200
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2113.0033000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................2213.0031101
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................................2513.0031110
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................2113.0030102
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2213.0033000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTC..............................................................................................................................................................................2013.0030003
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2213.0032001
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2213.0032001
..............................................................................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................................1813.0030030
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................................2012.0021001
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2412.0021100
...........................................................................................................................................CG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................2012.0021001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--T..................................................................................................................................2412.0021010
..................................................................................................................................................................GTGATTTGTAGCAAAGTG..............................................................................................................................................................................1812.0022000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................2412.0021100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2412.0021010
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................2112.0022000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACAT......................................................................................................................................2212.0022000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................................2012.0022000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2212.0020002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................1812.0021001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................2012.0022000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGTT--...................................................................................................................................2212.0022000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2312.0022000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................2311.0010010
..............................................................................................................................................................GTGTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................................2311.0010001
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--TT.................................................................................................................................2311.0011000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................................2311.0010100
..................................................................................................................................................................GTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................2111.0011000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACC.......................................................................................................................................2011.0011000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGCC--A..................................................................................................................................2111.0011000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................................2011.0010100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2411.0011000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCA--C..................................................................................................................................2211.0011000
....................................................................................................................................................................GATTTGTAGCAAAGTGAT............................................................................................................................................................................1811.0011000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTA--T..................................................................................................................................2411.0011000
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2411.0010001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--AT.................................................................................................................................2511.0010010
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGTT--...................................................................................................................................2111.0011000
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2311.0011000
droYak3
ATAA---------------GTCT--GAACA-AGCTTCTAAATAACAT---TTTTC--------A------T------------------------------------------------------------------GGCG-TTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGA-CCTGCGAA----ATAC---A-C----AGGG---------------------------ATATGTAAAAAAG-------------A--CAGTGCT-----TT-----------------TTAAGSizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................22117535.001753521872119440232155253241010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2116807.00680710542851534342189312400000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211757.0075716965160300000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201456.004561719822216840000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................221423.00423859095231127920000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201378.0037803491681400000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221323.0032331517232934220000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................231251.0025167315934510000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................211185.0018519511313536480000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................231121.001217610620000000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19174.00740433010000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................23163.00632871750150000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22161.00611262922100000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20161.00610421700110000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18160.00600332610000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................20147.00470136639100000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................23147.00470271910000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................23147.0047972160130000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19141.0041036500000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................21138.0038115702760000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19127.0027331811100000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................23125.0025019600000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................21124.0024011800410000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................19123.0023021200000000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18122.0022012720010000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................22122.0022021100000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................24121.0021071300010000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................22120.002015631040000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22120.0020013700000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................21117.001719400300000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................22115.0015011300100000
................................................................................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................................19115.001515002070000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................................22114.0014101300000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................23112.001207400010000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................21111.0011001100000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2219.00908100000000
............................................................................................................................................G-TTACTGGGCATTTTGGGT..................................................................................................................................................................................................1917.00701320010000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2217.00702500000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................2116.00605000010000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................2016.00615000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2215.00503200000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................1815.00503100100000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2515.00503010010000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................2114.00401300000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................................2314.00420200000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................................2314.00403100000000
...........................................................................................................................................CG-TTACTGGGCATTTTGGGT..................................................................................................................................................................................................2014.00401110010000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................................1813.00302100000000
................................................................................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................................1813.00320100000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................................2113.00330000000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................2213.00301200000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................................2112.00202000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2412.00201100000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................2312.00210010000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................................2012.00202000000000
............................................................................................................................................G-TTACTGGGCATTTTGGGC..................................................................................................................................................................................................1912.00200200000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................................2112.00202000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TT.................................................................................................................................2512.00202000000000
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................2212.00200100100000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................2212.00201001000000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................................1911.00100100000000
...................................................................................................................................................................................................CATCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2411.00101000000000
droEre2
AAGAT-C---------------T--AAACA-AGCTTCAGAAAAACAT---ATTTG--------A------T------------------------------------------------------------------GACG-GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGA-CCTGCGAA----ATAC---A-C----AGTG---------------------------TTATGGAAAAAAG-------------A--AAGTGCT-----CT-----------------TCAAGSizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................22111100.001110078252239169106726890
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2117009.00700952363761401441179960
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................221915.009151397361035934420
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211677.006776461424380
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................211500.005004702742052170
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201416.004163923240150
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221408.0040814810226591630
................................................................................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................201355.00355370150792240
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201295.00295205394215300
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................23184.0084374212020
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................22180.0080602022500
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................23165.0065715324250
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................21162.006254000080
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................23161.0061401131060
................................................................................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................................19156.0056901032140
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................21155.00551616017150
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20149.0049381100000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19146.004629210860
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................23139.0039101211690
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19136.003625900110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................23132.003230100010
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19126.002622100030
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22125.002519401010
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................20123.002380002130
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22123.002316420010
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................21122.002220208100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................21120.002017100020
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................22119.00198101720
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21119.00199100360
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18118.001814200020
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................19117.001717000000
...............................................................................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................23117.00172020670
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18116.001613201000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................21114.001413100000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................23112.001211100000
...................................................TTTG--------A------T------------------------------------------------------------------GACG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................28111.001100000011
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................................21110.00100010630
................................................................................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................................1819.0090010260
.................................................................................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................................1916.0066000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................2216.0063001110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2216.0065100000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................2016.0066000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2515.0051000400
................................................................................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................................2015.0052000120
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2215.0054010000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................2315.0050001130
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2414.0041000120
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................2114.0043100000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2013.0033000000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................................1913.0032000010
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2413.0032000010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................2313.0032010000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2113.0033000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGG......................................................................................................................................2113.0033000000
............................................................................................................................................G-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................1913.0030000030
......................................................G--------A------T------------------------------------------------------------------GACG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................2512.0020000002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................2212.0022000000
...........................................................................................................................................CG-GTACCGGGCATTTTGGGT..................................................................................................................................................................................................2012.0020000110
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................................2012.0022000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................................2112.0021100000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2212.0022000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2212.0022000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--A..................................................................................................................................2412.0020100010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2412.0022000000
..............................................................................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................................1812.0020000200
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................2012.0021100000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--...................................................................................................................................2112.0022000000
...................................................................................................................................................................TGATTTGTAGCAAAGTGAT............................................................................................................................................................................1912.0022000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2212.0022000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................................1812.0022000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2412.0022000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................................2012.0020000020
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2212.0022000000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTTT.............................................................................................................................................................................2112.0020000110
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................2212.0022000000
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAG............................................................................................................................................................................2111.0011000000
dp5
AGAA---------------GCTA--GA-TA-AG-------AAAAAGT---TTTTATATCCCGGATAA-------------C---------------------TGGG-TATCCAGGAATC-------------------CAG-ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGA-ATCCC-ACAC--CTAC---A-C----TCTCAT----------ATAATG-ATCATGTG-----A-------------ACG-----AA------------AA----C-------------AAAASizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................22115118.0015118360915234321019922133451864
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2116757.006757148925787092901664139356
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211702.0070206152552251011
................................................................................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................201436.0043612560233510351912
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221401.0040102055720374831300
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201400.00400037658621020
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201365.00365016952134531010
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................221352.003521130295172842321652
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................211288.0028801452161842131744
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................211130.001300687252215245
................................................................................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................................191123.00123080211623046
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................231112.001120245829100000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................201105.0010504910016106914
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................23197.00970473216010010
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19191.00910562011300001
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20186.00860541219000100
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22169.006904399420200
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................................21165.0065039220316300
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................23164.0064038157100030
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22158.0058034159000000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18153.0053035710100000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................................20251.50103076000419022
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18147.004704042100000
................................................................................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................................18131.003101410120148
.................................................................................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................................19130.003002800001100
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................22129.00290901374113
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................23129.002905610121112
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19124.002402211000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19121.002101224111000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGT.............................................................................................................................................................................20118.00180700037100
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................23116.001601132000000
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................22115.00150700024020
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21113.001301300000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................21111.001101010000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................................22111.001101100000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................23111.00110810001010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................21111.00110514100000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................19110.00100800000020
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................24110.00100721000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................23110.00100503101000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................22110.00100400020310
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................2319.0090300210210
............................................................................................................................................G-ACTGTGGACATTTTGGGT..................................................................................................................................................................................................1918.0080201401000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................2118.0080152000000
..................................................................................................................................................................GTGATTTGTGGCAAAGTGAT............................................................................................................................................................................2017.0070700000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2217.0070421000000
..........................................................................................................................................CAG-ACTGTGGACATTTTGGGT..................................................................................................................................................................................................2116.0060000000501
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................2116.0060100040100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................2116.0060402000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2216.0060501000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTTT.............................................................................................................................................................................2145.002001400032100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2215.0050211100000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2415.0050401000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2215.0050311000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................................2214.0040100001020
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2314.0040301000000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGT......................................................................................................................................1814.0040400000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................2314.0041200001000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2314.0040400000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................1814.0040211000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................2013.0030300000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................................2113.0030021000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2413.0030210000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGC...............................................................................................................................................................................1913.0030000001002
...........................................................................................................................................AG-ACTGTGGACATTTTGGGT..................................................................................................................................................................................................2013.0030100000101
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATATG.........................................................................................................................................................................2513.0030000000030
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2113.0030300000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................2212.0020011000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATAA..........................................................................................................................................................................2312.0020000200000
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2312.0020200000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGC.............................................................................................................................................................................2112.0020001100000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAC............................................................................................................................................................................2212.0020010100000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................................1812.0020200000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGTT--...................................................................................................................................2212.0020200000000
..................................................................................................................................................................GTGATTTGTGGCAAAGTGA.............................................................................................................................................................................1912.0020200000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGG.............................................................................................................................................................................2112.0020200000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................................2312.0020100001000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................................2212.0020010100000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAA............................................................................................................................................................................2112.0020100010000
.................................................................................................................................................................TGTGATTTGTGGCAAAGT...............................................................................................................................................................................1812.0020200000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTA..............................................................................................................................................................................2041.7570700000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTT..............................................................................................................................................................................1941.5060600000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................................2311.0010100000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCT.........................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCT.........................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGT......................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGTT--...................................................................................................................................2111.0010100000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................................2411.0010100000000
...................................................................................................................................................................TGATTTGTGGCAAAGTGA.............................................................................................................................................................................1811.0010100000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAC............................................................................................................................................................................2111.0010010000000
droPer2
AGAA---------------GCTA--GA-TA-AG-------AA--AAAAGTTGTTATATCCCGGATAA-------------C---------------------TGGG-TATCCAGGAATC-------------------CAG-ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGA-ATCCC-ACAC--CTAC---A-C----TCTCAG----------ATAATG-ATCATGTG-----A-------------ACG-----AA------------AA----C-------------AAAASizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2111375.001375217869821524510
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................2211294.00129424829331372674
................................................................................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................201497.0049721721727432
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................211339.003390821331285
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................221250.0025001261736179
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................................211150.0015007056132
................................................................................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................................191146.00146051514121
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221134.00134029639564
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................211131.001310121114562
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................21198.00980892160
................................................................................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................................20296.50193460918156
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................20183.008304092743
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................20167.00670621130
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................20160.006013349121
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGT.............................................................................................................................................................................20119.00190202510
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................23116.0016222109
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................22116.0016011266
.................................................................................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................................19115.0015040137
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................23115.00150021210
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19115.0015020562
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22112.0012071220
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................22111.0011011423
................................................................................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................................18111.0011011315
............................................................................................................................................G-ACTGTGGACATTTTGGGT..................................................................................................................................................................................................19110.0010000109
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2319.009051210
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................2218.008070100
................................................................................................................................................................GTGTGATTTGTGGCAAAGTC..............................................................................................................................................................................2017.007000106
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................1817.007070000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTTT.............................................................................................................................................................................2146.50260002222
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................................2216.006000015
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGTC............................................................................................................................................................................2216.006000006
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2316.006000015
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................1915.005030110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2315.005041000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................1914.004040000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2214.004020002
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................2014.004040000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATATGC........................................................................................................................................................................2614.004000004
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGTA............................................................................................................................................................................2213.003000003
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................1813.003030000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATATG.........................................................................................................................................................................2513.003000003
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................1913.003011100
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATTC..........................................................................................................................................................................2413.003000003
................................................................................................................................................................GTGTGATTTGTGGCAAAGTCT.............................................................................................................................................................................2112.002000002
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATCG..........................................................................................................................................................................2412.002000002
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................2312.002000002
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2212.002010010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................2112.002020000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2312.002110000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATATG.........................................................................................................................................................................2412.002000002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--G..................................................................................................................................2412.002200000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2212.002020000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATCC..........................................................................................................................................................................2412.002000002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................2112.002010010
................................................................................................................................................................GTGTGATTTGTGGCAAAGTA..............................................................................................................................................................................2031.334010021
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................2111.001000100
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAAA.........................................................................................................................................................................2511.001000001
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................................1811.001000010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................2111.001000010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACAT......................................................................................................................................2211.001001000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATATGCA.......................................................................................................................................................................2711.001000001
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2211.001010000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................................2411.001000001
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................................2011.001010000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................2411.001010000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCG.........................................................................................................................................1911.001010000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................................2311.001010000
..................................................................................................................................................................GTGATTTGTGGCAAAGTGAT............................................................................................................................................................................2011.001010000
...............................................................................................................................................................TGTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2411.001000100
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGG.............................................................................................................................................................................2011.001000010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2211.001010000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2311.001000010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................2111.001000010
...................................................................................................................................................................................................CATCCCCTTGTTGCAAACCT...........................................................................................................................................2011.001000010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2211.001001000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2311.001001000
....................................................................................................................................................................GATTTGTGGCAAAGTGAT............................................................................................................................................................................1811.001000100
droWil2
AGTA---------------GAA---------AGATTCTA--------------AATATCTT-----------AAGTACATTTGTTT-AGTTAAA-------------------------------------------ACGA-ATTGTGGGCATTTCGGGCGTGTGATTTGTAGCAAAGTGATATGTACTTGAT--AATCCCCTTGTTGCAAACCTCACGCCGGAAAGATGT-CTCC--AA----ATAC---ATC--------AG----------------------TCGATATCCAGAA----------------T--CAG---------TT----T-------------GCAASizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................2215587.005587493400441646403
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................2113774.003774196215023712693
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................221890.0089022913355301172
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211325.0032523001148
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221297.00297286149798
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................211283.0028335573211643
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201176.0017601590107
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201109.0010996921019
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT.....................................................................................................................................23191.009195701312
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................23187.00875362224
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................23170.00703286195
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19167.0067067000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................................20166.006621061929
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................22158.00581271362
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................................21153.00533263129
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC.....................................................................................................................................23145.00451526040
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18132.0032031010
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................................23131.0031178303
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19129.002915689
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20126.0026025001
................................................................................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................................19124.0024431340
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA.....................................................................................................................................23123.0023115070
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18119.0019018001
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19116.0016013021
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22114.0014011021
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................................22113.0013101101
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................................20111.001114222
..........................................................................................................................................CGA-ATTGTGGGCATTTCGGGC..................................................................................................................................................................................................21111.001141042
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21110.001004132
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCTT....................................................................................................................................2419.00908001
............................................................................................................................................A-ATTGTGGGCATTTCGGGC..................................................................................................................................................................................................1919.00930033
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2319.00908010
..................................................................................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................................2018.00843010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCAA....................................................................................................................................2418.00805030
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2217.00706100
................................................................................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................................1817.00770000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG.....................................................................................................................................2317.00704003
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT.....................................................................................................................................2216.00603012
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................................2216.00620130
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................................2116.00660000
..............................................................................................................................................ATTGTGGGCATTTCGGGC..................................................................................................................................................................................................1816.00620022
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCCA....................................................................................................................................2415.00503020
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................1915.00505000
...........................................................................................................................................GA-ATTGTGGGCATTTCGGGC..................................................................................................................................................................................................2015.00530002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................2114.00403010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCCT....................................................................................................................................2414.00413000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................................1813.00303000
.........................................................................................................................................ACGA-ATTGTGGGCATTTCGGGC..................................................................................................................................................................................................2213.00310002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................2113.00300021
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................................2213.00302001
.................................................................................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................................1913.00302001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT.....................................................................................................................................2313.00303000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC.....................................................................................................................................2213.00312000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................2113.00300012
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................2312.00200011
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA.....................................................................................................................................2212.00202000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................2012.00220000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2212.00202000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCTT....................................................................................................................................2212.00202000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCCC....................................................................................................................................2412.00211000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................................2112.00201001
.................................................................................................................................................................TGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................2211.00101000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATCC..........................................................................................................................................................................2411.00110000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................................2411.00100010
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGACC...........................................................................................................................................................................2311.00110000
...................................................................................................................................................................TGATTTGTAGCAAAGTGA.............................................................................................................................................................................1811.00101000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGATA...........................................................................................................................................................................2111.00101000
.................................................................................................................................................................TGTGATTTGTAGCAAAGT...............................................................................................................................................................................1811.00101000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGCA.....................................................................................................................................2011.00101000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGT......................................................................................................................................1911.00101000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTG..........................................................................................................................................1811.00110000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................................2511.00100010
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGCT.....................................................................................................................................1911.00101000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCA.....................................................................................................................................2111.00101000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2111.00101000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGCT.....................................................................................................................................2411.00101000
...................................................................................................................................................................................GATATGTACTTGAT--AATCCCCTTGTTGCA................................................................................................................................................2911.00101000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................................2511.00100010
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGT......................................................................................................................................1811.00101000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCTA....................................................................................................................................2411.00101000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGTAA....................................................................................................................................2111.00101000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCCG....................................................................................................................................2411.00100001
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCTC....................................................................................................................................2411.00101000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................................2311.00100010
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCCT....................................................................................................................................2211.00110000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGACT...........................................................................................................................................................................2311.00100010
...................................................................................................................................................................................................AATCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2511.00101000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................................2011.00101000
..................................................................................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................................1911.00100010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCCC....................................................................................................................................2311.00101000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACAA......................................................................................................................................2211.00101000
................................................................................................................................................................GTGTGATTTGTAGCAAAGTGATAG..........................................................................................................................................................................2411.00100100
...............................................................................................................................................................................................................................................A----ATAC---ATC--------AG----------------------TCGATATCCAG.........................................................2111.00100010
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCCA....................................................................................................................................2211.00101000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCTTT...................................................................................................................................2511.00101000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCCCCC..................................................................................................................................2611.00100001
...............................................................................................................................................................CGTGTGATTTGTAGCAAAG................................................................................................................................................................................1911.00110000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCGT....................................................................................................................................2411.00110000
droVir3
GTGAT-T---------------TATGCACA-G-------------AT-CA-----TG------------------------------------------------------------TCCAGAGTGTGT--------AATA-TATCTGCGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC-TTGGATTCCATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGG-CGC-----ATTTAACC---AGCAAT-----AT--------------------------------------------------------------------------------AAAGATTCATSizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................22113847.0013847461616835131583353221758115714824926515327507062124104112173152109117541197543706438561183937933127714152026184320939544912534368117158765832033314914925329646213170121169
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................21111493.0011493298849133928442435127619195471868726719958811301021921261081701171741738616810465115851169915364004001213023234121135120257731365101126801591361089513410181323281211217
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221881.008810211618461131253110619641792251077510181929101491382415141115832002000110000001000001082200521552653756335
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201845.0084518403510430100528210515601333119310291669591278481100000001000001002116516041820361264753581118
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................221778.0077805706222244211610024551213412121513202925161015241064103000013001011100000171350019181099414023282927746610
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................211693.00693006396010000002031020000330123300011000100000000000000000000000022900001003101002
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................231532.00532451478461000001014721923596451161011454165382701011102212121100384320151945410521104453610
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201441.00441003964000000000110101000401022510210300040000000000000000000011100310002001000101
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................211386.0038601332615201281010013415204027877991441010000107000000000010000000032746037543121122134734411
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................................221325.0032500372524030015621040050454296510245321453200000000002000000011291700111211421100016972730
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................231324.0032451519367500000010002001402212221911718030000290000112001110000000032901000027191420272000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................231241.00241323244000000001000000021100020002504000110001110014222231000210000010022211019142404110
..............................................................................................................................................TATCTGCGCATTTTGGGC..................................................................................................................................................................................................181213.00213962500000000000000100000011012203001201220000000000000000000010000305302651328700000
............................................................................................................................................A-TATCTGCGCATTTTGGGC..................................................................................................................................................................................................191182.0018243062000000001000001010025332120100111321000000000000000000014102052525146917840042
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................231152.0015200911020001011011100100322272203030122220001221010113001000007036031714113131111021
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................231134.0013420702100010000100100000003330200101001510000001010110010001305000020139716111740042
................................................................................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................201134.001340128111300010002102005013001128260600000100000000001000000000132900000340402000010
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................211127.00127008104300300010221101015021135450000120200000000000000000001390116211001000904911
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................231122.00122104716000000011100000130114100000020023100110000000010020000122004101000103036025
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19186.008601193000100005021000032021210241523001030000000000000112000031000020031201002111
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................24184.0084002122000000000001010002000002300100010101010000000110001000110001000204405402000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................19178.007800655000000010001000000000000000111100010000000000000000000000000010000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................................24175.0075000200000000000000000000000000110100000002220310100302010020000000001297431500100
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................18173.007300534000000000020010002000010010000000000000000000000000000000000000013023000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................20170.007000604000000000000000100000100000000101001000000000000000000000000000001000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................22162.006200256010000000010000200001001400100200100000000000000000000021100000020030104021
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................22161.006100249000000000000000000000000000000001200000000000000000000000002102000000005735
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................20150.005000100110100001000100000000000132200001002000000000000000000008400013100000020014
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................24145.00450072000000000000000000000000000000000100010001010011000000100000021055030503311
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18142.004200331000000000000100100001110010000000010000000000000000000000000010000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................19140.004000380000000000000000010010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................23137.003700244000000000010000000000001010000000020000000000000000000001000000100000001010
................................................................................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................................18136.00360010001000000000000000001010001001000000000000100000010000001000001057412700000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................21135.003500141010000002101000000000001000000001010010000000000000000000000110000000004212
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................21133.003311202000000000001000000010000001000000001000000000001000010000000010001000000100
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19129.002900241000000000010000100000000000110000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................20128.002800121000000003000000000000010000013000111000000000000000000000000010000000002100
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................22126.00260000000000000200000000001001000000000000000000000000000000000000134300000021161
...........................................................................................................................................TA-TATCTGCGCATTTTGGGC..................................................................................................................................................................................................20124.00241330100000000000000000000000000000010000000000000000000000000000110007022200000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................23121.00210060000000001000000010201021001200101000000010000000010000000000000000000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................................22119.00190020000000000000000031102001100020010100000000000000000000000000001001000000101
................................................................................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................................19119.00190220000000000000010001120000010200000001000000000000000000021100000020000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21119.001900120101000001000000001000001000000000010000000000000000000000000000010000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................22115.00150381000000000000000010100001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--C..................................................................................................................................24115.00150015000000000000000000000000001000001000000000000000000000000000000000120400000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................21115.00150053000000000011000010010000010000000000000000000000000000010000000000010000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................22115.00150021032000000000000000000000110102000000000000000000000000000200000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................18114.00140251010000000000000000000000000000000000000000000000000100000000000000031000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................................22114.00140001002000000000000000000000010000000000000000000000000000000000000021000010033
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATGAGC-.......................................................................................................................................................................26113.00130000002000022000000000000102000000000100000000000000000000000000000002000000010
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................................21111.00110041000000000010010000000102001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................................22111.00110020000000000000000000000311000001001100000000000000000000000000000010000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................................23110.00100010002000000000000000000001000000000000000000000000000000000100000011021000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATGA..........................................................................................................................................................................2319.0090000000000000000000000000101000000000000000000000000000000000200010000001012000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................................2118.0080000031000000010000000000000000000000000000000000000000000000300000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2318.0080021000000000000000000000000000000100020000000000000000000000000100100000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--...................................................................................................................................2118.0080031000000000000000000001000001000000000000000000000000010000000000100000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2217.0070200000000010000000001000000000000100000000010000100000000000000000000000000000
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2416.0060050000000000000000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACAA......................................................................................................................................2216.0060050000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2216.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAAA.......................................................................................................................................2115.0050030000000000000000000000000010100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................2215.0051120000000000000000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAAA...........................................................................................................................................................................2324.5090000000000000000000000000130000000000000000000000100000000000100000002000010000
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGCT--...................................................................................................................................1914.0040020000000000001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................2214.0040011000000000000000000000000000000000000000000000000000000000000000020000000000
..................................................................................................................................................................GTGATTTGTGGCAAAGTGAT............................................................................................................................................................................2014.0040030000000000000000000000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAT--...................................................................................................................................2314.0040002000000000000000000000000000000001000000000000000000000000000000100000000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATGT..........................................................................................................................................................................2314.0040000000000000000000000010011000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................................1814.0040030000000000000000000000000000000000000000000000000000000001000000000000000000
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................2114.0040010000000000000000000000000100000000100000000000000000000000000000000000100000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATTC..........................................................................................................................................................................2414.0040000000000000000000000000001100000000000000000000000000000000000000000020000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATCC..........................................................................................................................................................................2414.0041000000000000000000010000000010000000000000000000000000000000001000000000000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................................1923.5070000010000000000000000010000100100000002000000000000000000001000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGG.............................................................................................................................................................................2123.5070010000000000000000000000000000000000000000000000000000000000000000000123000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................................2213.0030110000000000000000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGA...............................................................................................................................................................................1913.0030020000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................................2013.0030010000000000000000100000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACCT......................................................................................................................................2213.0030020000000000000000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACC.......................................................................................................................................2013.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--G..................................................................................................................................2413.0030001000000000000000000000000000000000000000000000000000000000000000010000100000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATGAG.........................................................................................................................................................................2513.0030000000000000000000000010000000000000010000000000000000000000000010000000000000
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGCT--...................................................................................................................................2013.0030021000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--T..................................................................................................................................2413.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTA--...................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000010000000002000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--AA.................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000003000000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2113.0030020000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................................2313.0030000100000000000000000000000000000000010000000000000000000000000000000000000010
..........................................................................................................................................ATA-TATCTGCGCATTTTGGGC..................................................................................................................................................................................................2113.0032000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2213.0030001000000000000000000000000000000000000000000000000000000000100100000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................2012.0020000000000000001000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................C--AAAGGTGG-CGC-----ATTTAAC...........................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCA.........................................................................................................................................2012.0020010000000000001000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACA.......................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................................1812.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATGA..........................................................................................................................................................................2412.0020000000000000000000000000000000000001000000000000000000000000000000001000000000
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACC.......................................................................................................................................2212.0020010000000000000000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--G..................................................................................................................................2412.0020000001000000000000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTC..............................................................................................................................................................................2012.0020000000000000000000100000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATTT..........................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000002000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATGAAA-.......................................................................................................................................................................2512.0020000000000000000000000000010000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGCT--T..................................................................................................................................2112.0020010000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATCT..........................................................................................................................................................................2312.0020000000000000000000000000000100000000000000000000000000000000100000000000000000
................................................................................................................................................................................................TTCCATCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000020000000000000000
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAA........................................................................................................................................1912.0020010000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000101
....................................................................................................................................................................................................ATCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2312.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
AGAGC------------------------AGAGCCTTT------C-----------ATTTTGGATAAAGACTA-----------------TT---------------------------CGGAGTGTTATATCTATCATGTGTATTTGCGCATTTTGGTCGTGTGATTTGTGGCAAAGTGATGAGC-TATGATTCCATCCCCTTGTTGCAAACCTCACGCT--GAAGGTGA-CGC-----AT---AGCAGCAAC--------A--------------------------------------------------------------------A-----------------TTGAASizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................22166929.006692997412292282415646921
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................21111192.00111925386179205255513928
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2311685.00168521095514542
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................2111204.0012048562333400
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................201849.0084932218105035
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................................231793.00793200017720
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................................221597.005978373449697204
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................221561.0056117313163231413
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................231559.005591060004530
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................221544.00544190143103270
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................201496.00496458113330
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................211384.003848117419550100
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................191315.00315351002790
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................201315.00315540002610
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................221305.003054821123188105
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................................221246.00246682001751
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................201219.0021944533611363
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................181212.00212300001820
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................231171.00171420001290
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................241169.00169291211360
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................211113.001132013811952
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................23178.0078124104021
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................19163.006314211450
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................18153.005334000190
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................................21150.005014210330
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................19147.004725000220
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................22137.003723100130
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................................21133.00333000300
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................23132.00324300205
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................23131.00318003416
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................................24131.00310100300
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--A..................................................................................................................................24129.00295200220
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................................24124.00242000220
................................................................................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................20124.0024512709
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................................21122.00229110110
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAC............................................................................................................................................................................22121.00210100191
.............................................................................................................................................GTATTTGCGCATTTTGGTC..................................................................................................................................................................................................19119.00192600101
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................24118.00181000170
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--C..................................................................................................................................24116.00163100120
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCA.........................................................................................................................................20116.00161100050
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................21116.00161310011
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................................23115.00152000130
.................................................................................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................................19114.0014015305
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................19114.00141300010
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................................22114.00143000110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................................22114.00141000130
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................22112.0012800040
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................................22112.0012400008
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................................22111.0011500060
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................22111.0011502103
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................21111.0011302060
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................................21111.00111000100
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................................20110.0010700030
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGAC--...................................................................................................................................2319.009000090
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATGT..........................................................................................................................................................................2319.009012312
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTC--...................................................................................................................................2319.009201141
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--A..................................................................................................................................2418.008200060
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATGAGC-.......................................................................................................................................................................2618.008200006
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGCT--...................................................................................................................................2018.008000080
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--C..................................................................................................................................2418.008000080
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................2217.007110032
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGCC--...................................................................................................................................2017.007000070
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2117.007700000
................................................................................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................................1917.007310111
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2416.006300030
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................................2316.006100050
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGCC--...................................................................................................................................1916.006100050
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................................2216.006100140
............................................................................................................................................TGTATTTGCGCATTTTGGTC..................................................................................................................................................................................................2016.006120030
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGCT--...................................................................................................................................2116.006100050
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGA......................................................................................................................................2315.005200030
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................................2215.005210011
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAC............................................................................................................................................................................2115.005001040
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATTT..........................................................................................................................................................................2414.004210010
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................................2014.004000040
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................................1814.004000040
droGri2
AGCGT----------------TT--GTTTC-TTCTTTTAAAGCATAT---T------------------------------AA--A----TT---------------------------CCGAGTGT----------GGTA-TTTCTGTGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC--TTGATTCCATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGG-CGC-----ATCTAAGC---AACAAT-----AT----T-------------------------A--ATATACAAGTTTCCACTA--------TTATT--AA-----------------T--TASizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................................211720.0072069921
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................................221697.006976907
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................................20163.0063621
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................................20157.0057552
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................................21154.0054540
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................................23151.0051510
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................22138.00381622
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................................22128.0028199
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................21112.0012210
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................................2419.00990
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................................1919.00981
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2316.00633
..........................................................................................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................................1816.00660
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................................2016.00660
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................................2115.00541
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................................2314.00440
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................................2214.00440
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................................2213.00312
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................................1813.00330
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................................1913.00330
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................................2213.00330
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................................2313.00330
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2312.00220
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TT.................................................................................................................................2512.00220
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................................2112.00220
.........................................................................................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................................1912.00220
........................................................................................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................................1912.00220
............................................................................................................................................A-TTTCTGTGCATTTTGGGC..................................................................................................................................................................................................1911.00110
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCG--A..................................................................................................................................2311.00110
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................................2211.00110
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................................2111.00110
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................................2011.00101
.....................................................................................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................................2311.00110
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................................2111.00110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--TG.................................................................................................................................2511.00110
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATTT..........................................................................................................................................................................2411.00101
................................................................................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................................2311.00110
.................................................................................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................................2211.00110
................................................................................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................................1911.00110
................................................................................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................................2011.00101
.......................................................................................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................................2011.00110
......................................................................................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TG.................................................................................................................................2511.00110
..............................................................................................................................................TTTCTGTGCATTTTGGGC..................................................................................................................................................................................................1820.50110

Generated: 10/20/2015 at 07:36 PM