ID:

dan_2667

 Coordinate:

scaffold_13337:16094586-16094742 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.1 -20.8 -20.7

Flybase annnotation

exon [dana_GLEANR_10587:6]; CDS [Dana\GF10633-cds]; exon [dana_GLEANR_10587:5]; CDS [Dana\GF10633-cds]; intron [Dana\GF10633-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCGCCCCAGAGCCCCGACAGTCCTGTTGTGCCAAATGTGCCCGCTAATGGTAGGTGACAGTGTCCTGTAGATGATATTTCTCTGCCTTCTACTGAACCAACTCACCGTACTAATGTTTCCTTTTCTCTATTTTTGATTTTTGTGTTAACTTGACTAAAATCCACAACCGAAACTCCAAAACATCCCGATCCAAAACCCCATCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAAAGGTCGGACAACAACCTCTAC
**************************************************(((((((((((((....(((((.((....)))))))....))))).......))))).)))..((((((.......((.......((((((.((.........)).)))))).......)).......)))))).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V106
head
 V055
head
..................................................GTAGGTGACAGTGTCCTGTAGAT........................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0
................GACAGTCCTGTTGTGCCA............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0
..........................TTGTGCCAAATGTGCCCGCTAATG............................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................CGATACAACACCCCATCCCA................................................... 20 2 1 1.00 1 0 1 0 0 0
..................................................GTAGGTGACAGTGTCCTGTAGATG....................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................................................CGATCGACCACCAAGAAGGAGC....................... 22 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................GATCGACCACCAAGAAGG.......................... 18 0 1 1.00 1 1 0 0 0 0
........................................................................................TCTACTGAACCAACTCACCGTAA.................................................................................................................................................. 23 1 1 1.00 1 0 0 0 1 0
..........................................................................................TAATGAAACAACCCACCGTACT................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 1
....................................................................................................................................................................................................................CGATCGACAACCGAGAAGGAGC....................... 22 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................GGAGCAAGGGTCGGACAA.......... 18 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................CCACCAAGAAGGAGCAAAGGTCGGA............. 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................GTCGATCGACCACCAAGAA............................ 19 0 1 1.00 1 1 0 0 0 0
....................GTCCTGTTGTGCCAAATGTGCCC...................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................GATCGACCACCAAGAAGGAG........................ 20 0 1 1.00 1 1 0 0 0 0
.................................................GGTAGGAGACAGTGTCAGGTAG.......................................................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0
.................................................GGTAGGAGACAGTGTCAGGT............................................................................................................................................................................................ 20 3 5 0.40 2 2 0 0 0 0
..............................................................................................GTACCAACTCACCGGACGA................................................................................................................................................ 19 3 8 0.13 1 0 0 0 0 1
..............................................................................................................................TCTATGGTTGATTTTTGTG................................................................................................................ 19 2 9 0.11 1 0 0 0 0 1
............................................................................................................................................................AAAAACCACAAACGAAACACCAAAA............................................................................ 25 3 11 0.09 1 0 1 0 0 0
..............................................................................................................................................................................................CAAAAACCCCATACCAGT................................................. 18 2 16 0.06 1 0 1 0 0 0
.................................................GGTAGGAGACAGTGTCAGG............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0
................................................................................................ACCAACTCACCGGCCGAAT.............................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GAGCGGGGTCTCGGGGCTGTCAGGACAACACGGTTTACACGGGCGATTACCATCCACTGTCACAGGACATCTACTATAAAGAGACGGAAGATGACTTGGTTGAGTGGCATGATTACAAAGGAAAAGAGATAAAAACTAAAAACACAATTGAACTGATTTTAGGTGTTGGCTTTGAGGTTTTGTAGGGCTAGGTTTTGGGGTAGGGTCAACCAGCTAGCTGGTGGTTCTTCCTCGTTTCCAGCCTGTTGTTGGAGATG
**************************************************(((((((((((((....(((((.((....)))))))....))))).......))))).)))..((((((.......((.......((((((.((.........)).)))))).......)).......)))))).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 V055
head
 M044
female body
 V105
male body		 M058
embryo
....................................................................................CGTAAGATGACTTGGTGG........................................................................................................................................................... 18 2 4 1.75 7 7 0 0 0 0
................................GTTTACACGGGCGATTACCATC........................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................................CTAGCTGGTTGTTCTTGCACG....................... 21 3 2 0.50 1 0 1 0 0 0
GAGGGGGGTCTCGGGGC................................................................................................................................................................................................................................................ 17 1 3 0.33 1 0 1 0 0 0
......................................................................................................................AAGAAAAGAGATAGAAACTA....................................................................................................................... 20 2 3 0.33 1 0 0 0 1 0
....................................................................................................................AGAGGAAAAGAGATACAAATTA....................................................................................................................... 22 3 4 0.25 1 0 0 0 1 0
........................................................................................................TGGCATGATAACAAGGGATAA.................................................................................................................................... 21 3 6 0.17 1 0 1 0 0 0
GAGCGGGGTCTCGGGTGT............................................................................................................................................................................................................................................... 18 2 9 0.11 1 0 1 0 0 0
..............TGCGGTCAGGACAACGCGG................................................................................................................................................................................................................................ 19 3 10 0.10 1 0 0 1 0 0
..................................................................................................................................................................................................................CAGCTTGCTGGAGGTTCTG............................ 19 3 11 0.09 1 0 0 0 0 1
......................................................................................................................AGGAAAAGAGATAAAAAG......................................................................................................................... 18 1 13 0.08 1 0 0 0 0 1
....................................................................................CGTAAGATGACTTGGTGGC.......................................................................................................................................................... 19 3 18 0.06 1 0 0 1 0 0
...............................................................................................................................................ACCATGGAACAGATTTTAG............................................................................................... 19 3 19 0.05 1 0 0 0 0 1
GAGCGGGGTCTGGGGGA................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 1 0 0 0
.....................................................................................AGGAGATGACTTGGTTGAA......................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................................................................TCGAGCCTGTTGATGGAGT.. 19 3 20 0.05 1 0 1 0 0 0
GACCGGGGTCTTGGGGC................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 1 0 0 0
...................ACAGGACAACAGGGTTTAG........................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
...........................................................................................................................................................................................................TGGCAACCAGCGAGCTGG.................................... 18 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:16094536-16094792 + dan_2667 CTCGCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGA-CA--GT-GT--CC-TGTAG--------ATG--------AT--------------------------------------------------ATT-TC------------TCTGCCTTCT------ACTGAACCAACTCACCGTACTAATGT-------------T------------TC--C-----TTT--TCTC-----TAT---TTTT------------GATTTTT--GTGTTAACTTGACTAAAATCCACA---------------------------------------------------------ACCGAAACTCCAAAACATCCCG-ATCCAAAA-------C-CCCA--------------TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAAAGGTCGGACAACAACCTCTAC
droBip1 scf7180000396589:340267-340525 - CTCGCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGCCAG--GGTCC--TT-TGGGG--------ATT--------AT----------------------------------------------------T-TT------------TATGCTTCTT------ACTGATCC-ACTCACCGTACTAATGT-------------T------------TC--C-----TTC--TCTC-TA--TTT---TTTT------------GATTTTT--GTGTTAACTCGACTAAA-TCCA---------------------------------------------------------ACACCGAAACTCCGCCACAACCCA-ATCCAAAA-------ACCCCA---------T----TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAGAGGTCGGACAACAATCTCTAT
droKik1 scf7180000302274:257045-257308 - CTCGCCCCAAAGCCC------------CGACAGCAGTCCAATTGTGCCAAATGTGC---CCGCAAATGGTATGTGC-AG--AG-AT--CG-CAGGG--------AAT--------TT--------------------------------------------------ATG-CC------------TTTGCTTACTTTACATTCTTAACC-GCTTACCATACTAATTTC------------T------------TT--C----------ACTT-----TTC---TTTT------------GATTTTTGTGTGTTAACTCGACTAAA-AACAA--------------------------------------------------------ACTCTGC--CACCGA-ACAACCCAAATCCAAAT-------TCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTTTAC
droFic1 scf7180000454065:241897-242144 - CTCGCCCCAAAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-AG--GA-AT--CT-CAAGG--------ATC--------TC--------------------------------------------------AAT-CC------------TCTGGTTACT------ACTCAACC-GCTCACCGTACTAATGT-------------T------------TC--C----------GCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-ACA-AA---------------------------------------------CAA------------------ACGA-ACAACCCA-ATCCAAAA-------CCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droEle1 scf7180000490993:1969129-1969382 + CTCGCCCCAAAGTCC------------CGACAGCAGTCCCGTCGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TT-GATGG--------ATC--------AC-------------------ACACACAC-----------------------ACA-CC------------TCTGCTAGCT------ACTCAACC-GCTTACCGTACTAATGT-------------T------------TCCTC----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAA--------------------------------------------------------------------CCGA-ACAACCCC-ATCCAAAA-------TCCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAGCAGCGCTCGGATAACAATCTCTAC
droRho1 scf7180000779160:13563-13819 + CTCGCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAACGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TG-GAAGG--------AAC--------AC--------------------------------------------------TTT-CC------------TCTGCTTACC------ACTCAACC-GCTTACCGTACTAATGT-------------T------------TC--C----------ACTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAAAA-------------------------------------------------------ACACCGAAACACCGA-ACAACCCC-ATCCAAAT-------CTCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAACAGCGCTCGGATAACAATCTCTAC
droBia1 scf7180000302428:3020061-3020329 - CTCGCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TC-CGAGG--------ATC------CAAC--------------------------------------------------ATG-CC------------TATGCTCACT------ACTCAAGC-GCTCACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-AACAAA---------------------------------------------CAAACAAAAAACACCGAAACTCCGA-ACCACCCA-ATCCAAAT-------CCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droTak1 scf7180000415352:257369-257627 - CTCGCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-TG--GG-AT--TT-CAAGG--------AAC--------AC--------------------------------------------------ATC-CC------------TCGGCTTTCT------ACTCAACT-GCTCACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TCTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAAAA------C-----------------------------------------------AACACCGAAACTCCGA-ACCACCCA-ACCCAAAT-------CCCCGA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droEug1 scf7180000409524:720382-720642 + CTCACCCCAAAGTCC------------AGACAGTAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTATGTTC-AG--GG-GT--CT-CGACG--------ACC--------AT--------------------------------------------------ATT-CC------------TTTACTTACT------ACTGAACC-GCTTACCATACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAAAA------CA---------------------------------------------AAACACCGAAACTTCGA-ACAACCCA-ATCCAAAT-------TCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCAGATAACAATCTCTAC
dm3 chr3L:7925193-7925453 - CTCGCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AGTTGGCGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CA------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droSim2 3l:7742701-7742961 - dsi_12766 CTCGCCTCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AGTTGGTGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CG------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droSec2 scaffold_0:219240-219500 - dse_385 CTCGCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTAT-AGTTGGTGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CG------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGGTCGGACAACAATCTCTAC
droYak3 3L:8513123-8513403 - CTCGCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-TG--GGTG---TT-TGAAA--------ATC--------AC--------------------------------------------------AACCTT------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATCT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAAACAC--CAA------------------------------------CACAC-AAAAACACCGAAACTCCGA-ACAACCCA-ATCCAATCCAACCAACCCCAA--------------ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droEre2 scaffold_4784:3434423-3434694 + der_708 CTCGCCCCAGAGTCC------------CGACAGCAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AG--GGTG---TT-TGTAA--------ATT--------AC--------------------------------------------------TAC-CG------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAAACAC--CA---------------------------------------------AAACACCGAACCTCCGA-ACAACCCA-ATCCAACCCAACCAAC--CCA---------TA---ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
dp5 XR_group8:1565453-1565730 + CTCGCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATTATCTTCCAC---------------------------------------------------------------------TCTG----CC------ACTCA-----CACACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCG----AC---------------------------------------CAAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTAC
droPer2 scaffold_24:1487935-1488212 - CTCGCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATTATCTTCCAC---------------------------------------------------------------------TCTG----CC------ACTCA-----CACACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCG----AC---------------------------------------CAAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTAC
droWil2 scf2_1100000004768:2702561-2702891 - TTCGCCAAACAGTCCGCTCAATGATGATGACAGTAGTCCCATTGTGCCAAATGTAC---CCGCAAATGGTAAGCAG-AA--GA-AT--AT-CATC------------------CATTCTTATTTTCATCCTGCCCGCCACACATCCATTTTAGTTAAACCTGATATCCAC-TTTTTAGTTG--------------------------------CACTTTACTAATCTCAATCTCTAATCTCTCTCTCTCTCTCTT--T----ACTTCCCCCCTTT--TTTTTTTTTTGGTTATGCTCTTG-CGTGT--GTGCTAACTCTAATA-----CTAAAAAT--CA---------------------------------------------AATCA---------------------------------------CCTG---------TCTTGTACCAGTTGGTCGTTCCACTACCAAAAAGGAGCAACGCACGGATAATAATCTATAC
droVir3 scaffold_13049:20742925-20743200 - dvi_20826 CTCGCCGCAGAGTCC------------AGATATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--C------------------------------------------------------------------------------TAC-CATCTGGCTGAACC---TTTAGCT----------AACC-TGCAACTCTACTAATTT-------------T------------CC--AACAAATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTCACTAAA-AAAAAA-AAC--CAAACAAAAACAAAACGAACCCGCCAATA----CATAAA----------AT---------------------A----AACCCG------AACCAA--------------TCCAAGTTGGTCGTTCGACCACCAAAAAGGAACAGCGCTCGGACAATAATCTATAC
droMoj3 scaffold_6680:8452264-8452516 - CTCGCCGCAGAGTCC------------CGACATAAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--CT------------------------------------------------------------------------------AC-CAAATGGCTGAACC---TTTAGCT----------AACC-TGCAACTGTACTAATTT-------------T------------CC--A----ATATTCTATTTTCTTTTG---TGTT------------TGTGTTT--GTGTTAACTTCACTAAA-AACGAA----TC---------------------C----ATA----TATAAA----------ACA--------------AAACCCA-A---------------CCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAGAAGGAGCAACGCTCGGACAACAATCTGTAC
droGri2 scaffold_15110:11787532-11787815 + CTCGCCACAGAGTCC------------AGACATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAAGTGA-TG--GG----------AGG--------CTC--------T---------------------------------------------------TAC-CAACTGGCTGCTCCTCTTTTAGCT------AACCTACT-GCAACTCGTACTAATTT-------------T------------CC--A---AATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTAACTAAA-CAAAAA-ACC--GTAACGAAACCAACCCAAAAAATTCAATACAAATATAAA---------AAT---------------------A----A-----------AACCAA--------------TCCCAGTTGGTCGTTCGACTACCAAAAAGGAGCACCGCTCGGACAATAATCTCTAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTCGCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGA-CA--GT-GT--CC-TGTAG--------ATG--------AT--------------------------------------------------ATT-TC------------TCTGCCTTCT------ACTGAACCAACTCACCGTACTAATGT-------------T------------TC--C-----TTT--TCTC-----TAT---TTTT------------GATTTTT--GTGTTAACTTGACTAAAATCCACA---------------------------------------------------------ACCGAAACTCCAAAACATCCCG-ATCCAAAA-------C-CCCA--------------TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAAAGGTCGGACAACAACCTCTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................GTAGGTGA-CA--GT-GT--CC-TGTAG--------AT.............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................GAC---AGTCCTGTTGTGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.........................................TTGTGCCAAATGTGC---CCGCTAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................................................................GTAGGTGA-CA--GT-GT--CC-TGTAG--------ATG--------....................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGACCACCAAGAAGGAGC.......................2211.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACCACCAAGAAGG..........................1811.001100000
................................................................................................................................................................................................TCT------ACTGAACCAACTCACCGTAA..........................................................................................................................................................................................................................................................................................2311.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAAGAAGGAGCAAAGGTCGGA.............2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGACCACCAAGAA............................1911.001100000
...................................GTCCTGTTGTGCCAAATGTGC---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACCACCAAGAAGGAG........................2011.001100000
droBip1
CTCGCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGCCAG--GGTCC--TT-TGGGG--------ATT--------AT----------------------------------------------------T-TT------------TATGCTTCTT------ACTGATCC-ACTCACCGTACTAATGT-------------T------------TC--C-----TTC--TCTC-TA--TTT---TTTT------------GATTTTT--GTGTTAACTCGACTAAA-TCCA---------------------------------------------------------ACACCGAAACTCCGCCACAACCCA-ATCCAAAA-------ACCCCA---------T----TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAGAGGTCGGACAACAATCTCTATSizeHit CountTotal NormTotal
No Reads
droKik1
CTCGCCCCAAAGCCC------------CGACAGCAGTCCAATTGTGCCAAATGTGC---CCGCAAATGGTATGTGC-AG--AG-AT--CG-CAGGG--------AAT--------TT--------------------------------------------------ATG-CC------------TTTGCTTACTTTACATTCTTAACC-GCTTACCATACTAATTTC------------T------------TT--C----------ACTT-----TTC---TTTT------------GATTTTTGTGTGTTAACTCGACTAAA-AACAA--------------------------------------------------------ACTCTGC--CACCGA-ACAACCCAAATCCAAAT-------TCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTTTACSizeHit CountTotal NormTotal
No Reads
droFic1
CTCGCCCCAAAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-AG--GA-AT--CT-CAAGG--------ATC--------TC--------------------------------------------------AAT-CC------------TCTGGTTACT------ACTCAACC-GCTCACCGTACTAATGT-------------T------------TC--C----------GCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-ACA-AA---------------------------------------------CAA------------------ACGA-ACAACCCA-ATCCAAAA-------CCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droEle1
CTCGCCCCAAAGTCC------------CGACAGCAGTCCCGTCGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TT-GATGG--------ATC--------AC-------------------ACACACAC-----------------------ACA-CC------------TCTGCTAGCT------ACTCAACC-GCTTACCGTACTAATGT-------------T------------TCCTC----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAA--------------------------------------------------------------------CCGA-ACAACCCC-ATCCAAAA-------TCCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droRho1
CTCGCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAACGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TG-GAAGG--------AAC--------AC--------------------------------------------------TTT-CC------------TCTGCTTACC------ACTCAACC-GCTTACCGTACTAATGT-------------T------------TC--C----------ACTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAAAA-------------------------------------------------------ACACCGAAACACCGA-ACAACCCC-ATCCAAAT-------CTCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAACAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droBia1
CTCGCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TC-CGAGG--------ATC------CAAC--------------------------------------------------ATG-CC------------TATGCTCACT------ACTCAAGC-GCTCACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-AACAAA---------------------------------------------CAAACAAAAAACACCGAAACTCCGA-ACCACCCA-ATCCAAAT-------CCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droTak1
CTCGCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-TG--GG-AT--TT-CAAGG--------AAC--------AC--------------------------------------------------ATC-CC------------TCGGCTTTCT------ACTCAACT-GCTCACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TCTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAAAA------C-----------------------------------------------AACACCGAAACTCCGA-ACCACCCA-ACCCAAAT-------CCCCGA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droEug1
CTCACCCCAAAGTCC------------AGACAGTAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTATGTTC-AG--GG-GT--CT-CGACG--------ACC--------AT--------------------------------------------------ATT-CC------------TTTACTTACT------ACTGAACC-GCTTACCATACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAAAA------CA---------------------------------------------AAACACCGAAACTTCGA-ACAACCCA-ATCCAAAT-------TCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCAGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
dm3
CTCGCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AGTTGGCGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CA------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................TAGGTGC-AGTTGGCGT--TT-TAAG........................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100
...................................................................GGTAGGTGC-AGTTGGCGT--TT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................CT------ACTCATCC-GCTGACCGTA...........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---CCCCAGTTGGTCGCTCGACTACC.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CTTACT------ACTCATCC-GCTGACCGT............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGAGCAGCGCTCGGA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TAC-CA------------TCTGCTTACT------ACTCATCC-GCT..................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGAGCAGCGCT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................GTCCCGTTGTGCCAAATGTGC---AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGTCCCGTTGTGCCAAATGTGC---CCACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGGAGCAGCGCTCGGATA...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCGTTGTGCCAAATGTGC---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACCAAAAAGGAGCAGCGCTCGGA.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTCGACTACCAAAAAG...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTACCAAAAAGGAGCAGCGCTCGGA.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGCTCGGATAACAATCTCTAC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGTCCCGTTGTGCCAAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCGTTGTGCCAAATGTGC---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TAGGTGC-AGTTGGCGT--TT-TAAGA--------...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACCAAAAAGGAGCAGCGCTCGG..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GCCAAATGTGC---CCACAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TAGGTGC-AGTTGGCGT--TT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................GCGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CA------------TCTGC.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TA--------AC--------------------------------------------------TAC-CA------------TCTGCTTACT------AC............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GTAGGTGC-AGTTGGCGT--TT-TAAGA--------ATA--------....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CA-ATCCAAAC-------T-CCCA---------TA---CCCCA...................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCTCGGATAACAATCTCTA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAAAGGAGCAGCGCTC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACCAAAAAGGAGCAGC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................AGGTGC-AGTTGGCGT--TT-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................CCCGTTGTGCCAAATGTGC---............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACCAAAAAGGAGCAGCGCTCGGA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................AC--------------------------------------------------TAC-CA------------TCTGCTTACT------ACT...........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GGTGC-AGTTGGCGT--TT-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........AGTCC------------CGACAGCAGTCCCGTTGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGAGCAGCGCTCGGATAAC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAAAGGAGCAGCGCTCGG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AGTCCCGTTGTGCCAAATGTGC---CCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................A-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTG...............................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TA--------AC--------------------------------------------------TAC-CA------------TCTGCTTACT------ACT...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TTACT------ACTCATCC-GCTGACCG.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGCGCTCGGATAACAATCTC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GTAGGTGC-AGTTGGCGT--TT-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................C-AGTTGGCGT--TT-TAAGA--------AGT--------....................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTCGCCTCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AGTTGGTGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CG------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................AGA--------ATA--------AC--------------------------------------------------TAC-CG------------TCTGC.........................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.......................................CGTTGTGCCAAATGTGC---CCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................CACCGAAACTCCGA-ACAACCC.............................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGCTCGACTACC.................................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGCAGCGCTCGGATAAC.........2311.00100010000000000000
........AGAGTCC------------CGACAGCAGTCCCGTTGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
............................................................................................................................................................................................................................................................................................TTT------------GATTTTT--GTGTT..............................................................................................................................................................................................1560.33200000000020000000
droSec2
CTCGCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTAT-AGTTGGTGT--TT-TAAGA--------ATA--------AC--------------------------------------------------TAC-CG------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGGTCGGACAACAATCTCTACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAGCGGTCGG..............2411.0010100
................................GCAGTCCCGTTGTGCCAAATGTGC---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
......................................CCGTTGTGCCAAATGTGC---CCACAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGCAGCGGTCGGACA...........2111.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAGC....................1811.0010010
droYak3
CTCGCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-TG--GGTG---TT-TGAAA--------ATC--------AC--------------------------------------------------AACCTT------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATCT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAAACAC--CAA------------------------------------CACAC-AAAAACACCGAAACTCCGA-ACAACCCA-ATCCAATCCAACCAACCCCAA--------------ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...GCCCCAGAGTCC------------CGACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................AGCAGTCCCGTTGTGCCAAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGCAGCGCTCGGATAAC.........2211.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGCGCTCGGATAACAATCT....2511.00100000010000
droEre2
CTCGCCCCAGAGTCC------------CGACAGCAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AG--GGTG---TT-TGTAA--------ATT--------AC--------------------------------------------------TAC-CG------------TCTGCTTACT------ACTCATCC-GCTGACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACAAAACAC--CA---------------------------------------------AAACACCGAACCTCCGA-ACAACCCA-ATCCAACCCAACCAAC--CCA---------TA---ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................GTAGGTGT-AG--GGTG---TT-TGTAA--------ATT--------AC--------------------------------------------------................................................................................................................................................................................................................................................................................................................................................2611.0010000100
......CCAGAGTCC------------CGACAGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
dp5
CTCGCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATTATCTTCCAC---------------------------------------------------------------------TCTG----CC------ACTCA-----CACACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCG----AC---------------------------------------CAAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........GTCCCCC---------CGACACCAGTCCCGTTGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
CTCGCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATTATCTTCCAC---------------------------------------------------------------------TCTG----CC------ACTCA-----CACACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCG----AC---------------------------------------CAAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTCGGACAATAATCTCTAC2312.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAAAAGGAGCAGCGCTCGGACA...........2612.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCTCGGACAATAATCTCT..2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGACCACCAAAAAGG..........................1911.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCTCGGACAATAATCTCT..2411.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCACCAAAAAGGAGCAGCGCTCGGACA...........2911.001100000
droWil2
TTCGCCAAACAGTCCGCTCAATGATGATGACAGTAGTCCCATTGTGCCAAATGTAC---CCGCAAATGGTAAGCAG-AA--GA-AT--AT-CATC------------------CATTCTTATTTTCATCCTGCCCGCCACACATCCATTTTAGTTAAACCTGATATCCAC-TTTTTAGTTG--------------------------------CACTTTACTAATCTCAATCTCTAATCTCTCTCTCTCTCTCTT--T----ACTTCCCCCCTTT--TTTTTTTTTTGGTTATGCTCTTG-CGTGT--GTGCTAACTCTAATA-----CTAAAAAT--CA---------------------------------------------AATCA---------------------------------------CCTG---------TCTTGTACCAGTTGGTCGTTCCACTACCAAAAAGGAGCAACGCACGGATAATAATCTATACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAACGCACGGAT............2611.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACTACCAAAAAGGAGCAACGCACG...............2711.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCACTACCAAAAAGGAG........................2011.00100010
....CCAAACAGTCCGCTCAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGCAACGCACGGATAATAAT......2511.00100010
.........................GATGACAGTAGTCCCATTGTGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTTCCACTACC.................................1811.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCACGGATAATAATCT....1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAACGCACGG..............2411.00100010
droVir3
CTCGCCGCAGAGTCC------------AGATATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--C------------------------------------------------------------------------------TAC-CATCTGGCTGAACC---TTTAGCT----------AACC-TGCAACTCTACTAATTT-------------T------------CC--AACAAATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTCACTAAA-AAAAAA-AAC--CAAACAAAAACAAAACGAACCCGCCAATA----CATAAA----------AT---------------------A----AACCCG------AACCAA--------------TCCAAGTTGGTCGTTCGACCACCAAAAAGGAACAGCGCTCGGACAATAATCTATACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............CC------------AGATATGAGTCCCGTTGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000100000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAACAGCGCTCGGACA...........2112.002000002000000000000000000000000000000000000000000000000000000000
....................................................................GTAGGTGG-AG--GC-GT--C------------------------------------------------------------------------------TAC-CAC.........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCACCAAAAAGGAACAGCGCTCGG..............2811.001000001000000000000000000000000000000000000000000000000000000000
.....CGCAGAGTCC------------AGATATGAGTCCCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGGAACAGCGCTCG...............1911.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGCTCGGACAATAA.......1911.001010000000000000000000000000000000000000000000000000000000000000
.....CGCAGAGTCC------------AGATATGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000001000000000000000000000000000000000000000000000000000
...............................ATGAGTCCCGTTGTGCCAAATGTGC---............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................AC-CATCTGGCTGAACC---TTTAGCT----------AACC-TGC..................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000010000
.............CC------------AGATATGAGTCCCGTTGTGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
........................................GTTGTGCCAAATGTGC---CCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................TATGAGTCCCGTTGTGCCAAATGTGC---............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAACAGCGCTCGGAC............1911.001000000000000000000000000000000000100000000000000000000000000000
..........AGTCC------------AGATATGAGTCCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
...............................ATGAGTCCCGTTGTGCCAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...........GTCC------------AGATATGAGTCCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGGAACAGCGCTCGGA.............2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................GTAGGTGG-AG--GC-GT--C------------------------------------------------------------------------------TAC-CC..........................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAACAGCGCTCGGACA...........2011.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TTC---TTTT------------G-TGTTT--GTGTTC.............................................................................................................................................................................................1950.201000000000000000000000000000000000000000000000000000000000000001
droMoj3
CTCGCCGCAGAGTCC------------CGACATAAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--CT------------------------------------------------------------------------------AC-CAAATGGCTGAACC---TTTAGCT----------AACC-TGCAACTGTACTAATTT-------------T------------CC--A----ATATTCTATTTTCTTTTG---TGTT------------TGTGTTT--GTGTTAACTTCACTAAA-AACGAA----TC---------------------C----ATA----TATAAA----------ACA--------------AAACCCA-A---------------CCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAGAAGGAGCAACGCTCGGACAACAATCTGTACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACGCTCGGACAAC.........1911.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAACGCTCGGACAAC.........2011.001000010
..................................AGTCCCGTTGTGCCAAATGTGC---CCGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....CGCAGAGTCC------------CGACATAAGTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................TAAGTCCCGTTGTGCCAAATGTGC---CCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
...............................ATAAGTCCCGTTGTGCCAAATGTGC---CCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACGCTCGGACAACAAT......2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCGACCACCAAGAAGGAGCAACGCT.................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAGAAGGAGCAACGCT.................2011.001000001
droGri2
CTCGCCACAGAGTCC------------AGACATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAAGTGA-TG--GG----------AGG--------CTC--------T---------------------------------------------------TAC-CAACTGGCTGCTCCTCTTTTAGCT------AACCTACT-GCAACTCGTACTAATTT-------------T------------CC--A---AATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTAACTAAA-CAAAAA-ACC--GTAACGAAACCAACCCAAAAAATTCAATACAAATATAAA---------AAT---------------------A----A-----------AACCAA--------------TCCCAGTTGGTCGTTCGACTACCAAAAAGGAGCACCGCTCGGACAATAATCTCTACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGCTCGGACAATAATCT....2111.00110

Generated: 05/18/2015 at 05:07 AM