ID:

dan_2646

 Coordinate:

scaffold_13337:14541874-14542024 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.3 0.0 0.5

Flybase annnotation

exon [dana_GLEANR_8653:1]; CDS [Dana\GF23888-cds]; intron [Dana\GF23888-in]

No Repeatable elements found

mature
  1. scaffold_12929:2719600-2719618 +
  2. scaffold_13337:10556557-10556575 +
  3. dan_2646  scaffold_13337:14541966-14541984 -
star
  1. scaffold_13337:11807307-11807324 +
  2. dan_2646  scaffold_13337:14541929-14541946 -
  3. scaffold_13340:13419086-13419103 +
  4. scaffold_13340:22589772-22589789 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGTCCAACCGAGCTCCCAAGTCTGGTTTCGCTGCCGAGGCTCAGCGCAAAGTAAGTACAATACAACCAAAATCCAAACCCCAAATACAAAAAAAAAAAACAAAACAACCCAGTAAACAAATTGCCAAAAAAAAAAAAGAAACAACTTTTTGGAGCGTGTGTGTGAGTGAGTTTTGGAGCTGCATTGACTTTATTTGGCAAGTTTTATCTCCAACCCAGTAAAAATTAGCTAAAAATGGTCTCAAAATTGCC
******************************************************************************************.....................((((.....))))......................********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V055
head
 V106
head
 V039
embryo
 V105
male body
.......................GGTTTCGCTGCCGAGGCTCAGCGC............................................................................................................................................................................................................ 24 0 1 3.00 3 1 2 0 0 0 0
...........GCTCCCAAGTCTGGTTTCGC............................................................................................................................................................................................................................ 20 0 1 2.00 2 1 1 0 0 0 0
................CAAGTCTGGTTTCGCTGCCGA...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................AAAACAAACAAAACAACCC............................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
.........GAGCTCCCAAGTCTGGTTC............................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
........................GTTTCGCTGCCGAGGCTC................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
.....AAACGAGCTCCCAAGTCTGAT................................................................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
.................AAGTCTGGTTTCGCTGCCGAGGCTCAGC.............................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
........................GTTTCGCTGCCGAGGCTCAGCGCAA.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
CGTCCAACCGAGCTCCCAAGTCTGGT................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0
.......................................................................................AAAAAAGAAAAACAAAACAACCCA............................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.GTCCAACCGAGCTCCCAAGTCTG................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.........GAGCTCCCAAGTCTGGTTTCGC............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
................CAAGTCTGGTTTCGCTGCCGAGGC................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.......CCGAGCTCCCAAGTCTGGTTTCG............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
..................ATCCTGGTTTCGCTGCCGAGGCT.................................................................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..............CCAAAGTCTGGTTTCGCTGCC........................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AAACCAACACAACCCGGTAAAC...................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0
...............................TGCCGAGGCGCAGCGCAAA......................................................................................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 1 0
..........................................................................................AAAAAAAAACAAACCAACCC............................................................................................................................................. 20 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................AAAACAAAACAACCCACCA......................................................................................................................................... 19 2 20 0.35 7 7 0 0 0 0 0
..........................................................................................AAAAAAAAACAAAACAACC.............................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0
.........................................................................................AAAAAAAAAACAAAACAACC.............................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0
............................................................................................AAAAAAACAAAACCACCCAGAAA........................................................................................................................................ 23 2 3 0.33 1 1 0 0 0 0 0
............................................................................................AAAAAAACAACACAACCCA............................................................................................................................................ 19 1 3 0.33 1 1 0 0 0 0 0
...............................................................................................AAAACAAAACAACCCAAAAAACA..................................................................................................................................... 23 2 4 0.25 1 1 0 0 0 0 0
................................................................................................................................AAAAAAAAAGAAACAACT......................................................................................................... 18 0 4 0.25 1 1 0 0 0 0 0
.....................................................................................................AAACAACCCAGGAGACAAA................................................................................................................................... 19 2 5 0.20 1 1 0 0 0 0 0
..........................................................................AAACCCCAAACACAAAAAAAA............................................................................................................................................................ 21 1 5 0.20 1 1 0 0 0 0 0
........................................................................................AAAAAAAAAAACAACACAACC.............................................................................................................................................. 21 1 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................ATTAGCCAAAGATGGTCT.......... 18 2 5 0.20 1 0 0 0 0 1 0
.......................................................................................AAAACAAAAAAACAAAACAACC.............................................................................................................................................. 22 1 5 0.20 1 1 0 0 0 0 0
............................................................................................AAAAAAACAAAACAGACCAGAAAACA..................................................................................................................................... 26 3 5 0.20 1 1 0 0 0 0 0
.......................................................................................................................................................................GAGCTTTGGAGCCGCATTGC................................................................ 20 3 6 0.17 1 0 0 1 0 0 0
...........................................................................................AAAAAAAACAAAACCACCC............................................................................................................................................. 19 1 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................AAAAAAAAGAAACAGCGTTTGGG................................................................................................... 23 3 6 0.17 1 0 0 1 0 0 0
...........................................................................................AAGAGAAACAAAACAACCC............................................................................................................................................. 19 2 7 0.14 1 1 0 0 0 0 0
.........................................................................................AAAAACAAAACAAAACAACC.............................................................................................................................................. 20 1 16 0.13 2 2 0 0 0 0 0
........................................................................................AAAAAAAAGAACAAAACACCCC............................................................................................................................................. 22 2 8 0.13 1 1 0 0 0 0 0
..........................................AGCGTAGAGTAAGTACACTA............................................................................................................................................................................................. 20 3 8 0.13 1 0 0 1 0 0 0
..........................................................................................AACAAGAAACAAAACAACCCAGA.......................................................................................................................................... 23 3 8 0.13 1 1 0 0 0 0 0
............................................................................................AAAAGAACAAAACTACCCA............................................................................................................................................ 19 2 9 0.11 1 1 0 0 0 0 0
.......................................................................................AACAAAAAAGAACAAAACAACC.............................................................................................................................................. 22 2 9 0.11 1 1 0 0 0 0 0
...........................................................................................AAAAAAAACAAAAGAACCC............................................................................................................................................. 19 1 10 0.10 1 1 0 0 0 0 0
.............................................................................................................................AAAAAAAAAAAAGAAACACC.......................................................................................................... 20 1 20 0.10 2 2 0 0 0 0 0
..........................................................................................AAAAACAAACAAAACAACC.............................................................................................................................................. 19 1 10 0.10 1 1 0 0 0 0 0
.............................................................................................AAAAAACAAAACTACCCCGGAA........................................................................................................................................ 22 3 12 0.08 1 1 0 0 0 0 0
.........................................................................................AAAAATAAAACAAAACAACC.............................................................................................................................................. 20 1 13 0.08 1 1 0 0 0 0 0
..........................................................................AAAACCCAAATACAAAGAAAAAAAAAA...................................................................................................................................................... 27 3 13 0.08 1 1 0 0 0 0 0
..........................................................................................AAAAAAAAACAACCCAACCCA............................................................................................................................................ 21 2 14 0.07 1 1 0 0 0 0 0
........................................................................................CATAAAAAAAACAATACAACCC............................................................................................................................................. 22 3 14 0.07 1 1 0 0 0 0 0
.............................................................................................AAAAAACAAAACAACCGA............................................................................................................................................ 18 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................CAAAAAAAAACAAAACAACC.............................................................................................................................................. 20 1 15 0.07 1 1 0 0 0 0 0
........................................................................................AAAAAAAGAAACAAAACAAC............................................................................................................................................... 20 1 15 0.07 1 1 0 0 0 0 0
......................................................................................AGAAAAAAAAAGACAAAACAACCC............................................................................................................................................. 24 3 16 0.06 1 1 0 0 0 0 0
.........................................................................................AAAAAAAAAACAAAACCACC.............................................................................................................................................. 20 1 16 0.06 1 1 0 0 0 0 0
.........................................................................AAAACCCCAAAGACAAAAAAAA............................................................................................................................................................ 22 2 16 0.06 1 1 0 0 0 0 0
..............................................................................................AAAAACAAACCAACCAAGTA......................................................................................................................................... 20 2 16 0.06 1 1 0 0 0 0 0
..........................................................................AAACCCCAATCACAAAAAAA............................................................................................................................................................. 20 2 16 0.06 1 1 0 0 0 0 0
..........................................................................................AAAAAAAAACAAAACAACGGAG........................................................................................................................................... 22 2 16 0.06 1 1 0 0 0 0 0
.....................................................................................................AAACAACCCAGGAAAGAA.................................................................................................................................... 18 2 16 0.06 1 1 0 0 0 0 0
..........................................................................................AAAAAAAAACGAATCAACCC............................................................................................................................................. 20 2 16 0.06 1 1 0 0 0 0 0
....................................................................................................AAAACCACCCAGAAAACAAA................................................................................................................................... 20 2 17 0.06 1 1 0 0 0 0 0
......................................................................................TAAAGAAGAAAAACAAAACAACC.............................................................................................................................................. 23 3 18 0.06 1 1 0 0 0 0 0
..............................................................................................AAAAACAAAACAACCCACCAAAAAA.................................................................................................................................... 25 3 18 0.06 1 1 0 0 0 0 0
.......................................................................................CAAAAAATAAAACAAAACACCCCA............................................................................................................................................ 24 3 18 0.06 1 1 0 0 0 0 0
...........................................................................................AAAAAAAACAAGACCACCCA............................................................................................................................................ 20 2 20 0.05 1 1 0 0 0 0 0
........................................................................................ACAAAAGAAAACAAAACAACC.............................................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
...........................................................................................AAAAAAAACAAACCTACCC............................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
...........................................................................................AAAAAACCCAAAACAACCC............................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
.........................................................................................AGAAAAAAACCAAAACAACC.............................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0 0
................................................................................................AAACAAAACAACCCAGCCACC...................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0
........................................................................................AAAAAACAAAACAAAACTACC.............................................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
............................................................................................AAAAAAACAAACCAACCCT............................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................AAAAAAGAACAAAACTACC.............................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................TGAGTTGTGGAGCTACATC.................................................................. 19 3 20 0.05 1 0 0 1 0 0 0
......................................................................................CAAAAAAAGAAAACAAAACACC............................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0
.................................................................................AAATACAAACAAAAAAAACAACA................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................CTGGATTGACTTTGTTTG....................................................... 18 2 20 0.05 1 0 0 0 0 0 1
....................................................................................................AAAACAACCCAGCAAAAAA.................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................AAAAAAAAAAAACAAAAAAACCC............................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
.........................................................................CAAACTCAGAATACAAAAAAAA............................................................................................................................................................ 22 3 20 0.05 1 1 0 0 0 0 0
................................................................................................AAACAAAACAACCCACCAAA....................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
............................................................................................AAAAAAACAAAAGAACCCAC........................................................................................................................................... 20 2 20 0.05 1 0 0 0 0 1 0
...........................................................................................AAAAAAAACAAAAAAACCCAGC.......................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0
.........................................................................................AAAATAAAAAGAAAACAACCC............................................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
...........................................................................................AAAAAAAACAACACAACCCACCA......................................................................................................................................... 23 3 20 0.05 1 1 0 0 0 0 0
....................................AGGCTCAGGGGGAAGTAAG.................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

GCAGGTTGGCTCGAGGGTTCAGACCAAAGCGACGGCTCCGAGTCGCGTTTCATTCATGTTATGTTGGTTTTAGGTTTGGGGTTTATGTTTTTTTTTTTTGTTTTGTTGGGTCATTTGTTTAACGGTTTTTTTTTTTTCTTTGTTGAAAAACCTCGCACACACACTCACTCAAAACCTCGACGTAACTGAAATAAACCGTTCAAAATAGAGGTTGGGTCATTTTTAATCGATTTTTACCAGAGTTTTAACGG
*********************************************************************************************************.....................((((.....))))......................****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 V106
head
 M044
female body
 V105
male body
..............................................................................................................................................................................................................................TTAGTCGAATTTTACTAGAGT........ 21 3 3 1.33 4 0 2 0 2
........................................................................................................GTTGGGTCATTGGTGTGACGGT............................................................................................................................. 22 3 2 1.00 2 2 0 0 0
.....TTGGCTCGAGGGTTCAGACCAATAA............................................................................................................................................................................................................................. 25 3 1 1.00 1 0 0 1 0
.............................................................................................................................................................................................................................TTTAGTCGAGTTTTACTAGAGT........ 22 3 3 0.33 1 0 1 0 0
.........................................................................................................TTGGCTCATTTGTTTGACGGA............................................................................................................................. 21 3 4 0.25 1 1 0 0 0
.........................................................................................................TTGGGTCATTGGTGTGACGGT............................................................................................................................. 21 3 4 0.25 1 1 0 0 0
.........................................................................................................TTGGTCCATTTGTGTAACGGT............................................................................................................................. 21 3 5 0.20 1 1 0 0 0
.........................................................................................................TTGGGCCATTGGTTTGACGGT............................................................................................................................. 21 3 6 0.17 1 1 0 0 0
.........................................................................................................TTGGTTCATTGGTTTGACGGT............................................................................................................................. 21 3 16 0.13 2 2 0 0 0
...............................................................................................................................................................................................................................TAGTCAAGTTTTACCAGAGT........ 20 3 14 0.07 1 0 1 0 0
...GGCTGGCTCGAGGGGCCAG..................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:14541824-14542074 - dan_2646 CGTCCAACCGAGCTCCCAAGTCTGGTTTCGCTGCCGAGGCTCAGCGCAAAGTAAGTACAATAC----A--ACCAAAATCCAA-----------ACCCCA-AA-----TACAAAAAAA-----------------------AAA----AA----------------------CAAAACAACCCAGTAAACAAATTGCCAA-AAAAAA--A-AAAGAAACAAC------------TTTTTG---------------------GAG---------------------------CG-TG----TGTGT--GAG---------TGA---GTTTTGGA------------GCTGCATTGACTTTATTTGGC-----------------AAGT-T-TTATCTC-----CA------------ACCCAGTAAAAATTAGCTAAAAATGGTCTCAAAATTGCC
droBip1 scf7180000396641:767190-767432 + CGTCCAACCGAGCTCCCAAGTCTGGTTTCGCTGCCGAGGCTCAGCGCAAAGTAAGTACAAT-------------------------------------C-CA-----GCCAAAAAAAAA----------------------AA----AA---------------CCTC---CAAAACAACACAGTAAACAAATTGCCAA-AAAAAA--A-------ACAGC------------TTTTTGGATAT--GC--------TGGGG----ATATGCTA-----------------TT-G------GTGT--TAG---------TGA---GT-TTGGA------------GCTGCATTGACTATATTTGGCA----------------AAGT-T-TTATCTG-----CTG------------GTTA--AAAAATTAGCTAAAAATGGTCTCGAAATTGCC
droKik1 scf7180000302383:501397-501605 - CATCCAACCGAGCAGCCAAGTCTGGGTTCGCCGCCGAGGCCCAGCGCAAAGTAAGT---------------------------------------------------------------------------------------------------------------------------------AAACAAATTGCCAA-AAAAAA--A------GTTCAC------------T-GT-----------------------GTT---------------------------TG-T------GTGT--GTG---------TGT---TG-TTGGA------------GCTGCATTGACTTTATTTGGTGCTT-T---TTGACGCCAACTTT-TAATGTGCTCCACTCGCGCCAA---ATGCCA--AAAAATTAGCTAAAAATGGTCTTGAAATTACG
droFic1 scf7180000454113:1350531-1350781 - CATCAAACCGTGCAGCCAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTAAGTACAACAA----AACTATAAC---------------------------------CAAAACCCCAAAAG-C----------CAAAATCA----AA----------------------CAAAACAACGAAATAAACAAATTGCCCA-AAAAA---A-------ACCTC------------T-TT-----------------------GGT---------------------------TG-G------------GAG---------TGA---GT-TTGGAG-----------CCTGCATTGCCTTTATTTGGCGCTC-C-----GACGCCAAGTTT-TAATCTG-----CTCGCGCCAA---ATGCCA--AAAAATTAGCTAAAAATGGTCTTGA-ATTGCC
droEle1 scf7180000491249:4973384-4973642 - CATCCAACCGAGCTGCTAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTAAGTACAACAA----A--AAAAACACCCA-----------------------------AAAAACAAAAAAG------------TAAAACCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCCCAAAA----A-------TCCGC------------T-TT-----------------------GCA---------------------------TG-GG----GGTTC--GAG---------TGA---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTA-C-----GACGCCAAGTTT-TTATCTG-----CTCGCGCCAA---ATGCCA--AAAAATTAGCTATAAATGGTCTTGAAATTGCC
droRho1 scf7180000779198:31862-32106 + CATCCAACCGAGCAGCTAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACAACAA----AAC-------------------------------A-----CCCAAAA----AAAAG------------T----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCC-AAAA----A-------TCCGC------------T-TC-----------------------GCA---------------------------TG-GG----TGTTC--GAG---------TGA---GT-TTGGGA-----------GCTGCATTGACTATATTTGGCGCTA-C-----GACGCCAAGTTT-TTATATG-----CTCGCGCCAA---ATGCCA--AAAAATTAGCCAGAAATGGTCTTGAAATTGCC
droBia1 scf7180000302428:820747-821016 - CTTCCAACCGTGCAGCAAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAGGTAAGTACAAAAG----CGT------------------AG---C-CCCACCTCCCCACC-AAG------TGAG-C----------C----CCA----AA----------------------CAAAACAGCCCGATGTACAAATTGCCCA-AAAAA---A-------GCCCA------------TTTT-----------------------GCC---------------------------TG-TG----TGTGC--GAGTGA-GTT--TGG-AGGC-CTGGAG-----------CCTGCAGTGACTCTATTTGGCGCTG-CGATACGACGCCAGG--T-TTATCTG-----CTCGCGCCAA---ATGCCA--AAAAACTAGCCAAAAATGGTCTCGAAACGGCC
droTak1 scf7180000415778:36837-37117 + CTTCCAACCGTGCAGCAAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTAAGTACAAAC-----AAAAAAAAAAACCCA-----AAG---A-CCCC-CT-----CCCAAGAAATATAAAC-CC---------C----CCA----AA----------------------CAAAACAGCACAATAAACAAATTGCCCA-AAAA----A-------TCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGTGC--GAGTGA-GTT--TGT-TACT-TTGGAA-----------GCAGCATTGACTTTATTTGGCGCTA-C-----GACGCCAAGTTTTTTATCTG-----CTCGCGCCAA---ATGCCA--AAAAATTTGCTAAAAATGGTCTTGAATTTGCC
droEug1 scf7180000409466:1888007-1888273 - CGTCCAACCGTGCAGCCAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTACGTACAAACT----A--------------------AG---C-CCCC-CTTTCCTTA-AAG------TAAACCCCACCAAAAACAA--AAC----A---A------------CAA----------CACACAATAAACAAATTGGCCG-AAAA----A-------TCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGTGCGAGAG---------TGA---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTA-C-----GACGCCAAGTTT-TTATCTC-----CGCGCGCCAA---ATGCCA--AAAAATTAGCTAAAAATGGTCTTGAAATTGCC
dm3 chr3L:4121935-4122205 - CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACCAAAT----AGCAACAACAACCGC-----------ACCCCC-CA-----CCCAAAAACCGAAGAG-C----------G----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCA-AAAAAA-AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGT--GCG---------TGA---GT-TTAGA------------GCTGCATTGACTTTATTTGGCGCTG-C-----GTTGTCAAGATT-TTATCTT-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAAATTGCC
droSim2 3l:4082271-4082538 - dsi_25825 CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACCAAAT----AGCAACAACAACCGC-----------ATCCCC-CA-----TCCAAAAACCGAAGAG-C----------G----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCA-AAAA----A-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGT--TCG---------TGA---GT-TTGGA------------GCTGCATTGACTTTATTTGGCGCTG-C-----GTTGCCAAGATT-TTATCTC-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAAATTGCC
droSec2 scaffold_2:4114448-4114717 - CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACCAAAT----AGCAACAACAACCGC-----------ACCCCC-CA-----CCCAAAAACCGAAGAG-C----------G----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCTCA-AAAA----A-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGTGTTCG---------TGA---GT-TTGGA------------GCTGCATTGACTTTATTTGGCGCTG-C-----GTTGCCAAGATT-TTATCTC-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAAATTGCC
droYak3 3L:4692844-4693147 - CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACAAAAT----AACAATAACAAC---AAGC--AG---ACCCCC-CA-----CCCAAAAAATATAAAG-C----------G----CCAAACAAACAACAACAGCAACAACAAC------AAGAGCACATTAAACAAATTGCCAA-AAAAAA--A-CCAAAATCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGTGC--GCA-----TT--AGT---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTG-C-----GATGCCAAGATT-TTATCTC-----CGCGCGCCAAA--ATGCCA--AAAAATTAGCCAAAAATGGTCTTGAAATTGCC
droEre2 scaffold_4784:6830698-6830983 - CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACAAAAT----AGCAACAACCAC---ATGCGAAGTGAACTCCC-CA-----CCCAAAAACTAAAAAG-C----------G----CCAAACAAACAA---------------------CAACAACACATTAAACAAATTGCCCA-AAAA----A-------TCCAC------------TTTT-----------------------GCA---------------------------TG-GGTGTGCGTGC--GCG---------TGA---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTG-C-----GATGCCAAGATT-TTATCTC-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAATTTGCC
dp5 XR_group8:8287828-8288099 - dps_3376 CGTCCAACCGTGCACCCAAGTCTGGTTTTGCCGCCGAGGCCCAACGCAAAGTAAGTACTAAAA------CAACTAC-----------------------------------------------------------------------------------------AAC-----AAACAGCAGAATAAACAAATTGCCGA-AAAACAGAAA-CAGAA---ACT------GAA---------------AC--------TGGGGCCCGACGTGCTATGGGAGTGTGGGGTGGTTGGGG----TG-----------------TGTG--CT-TTGGAGGCTGCTCGGCTGCATCATTGACTTTATTTGGCGATT-C-----GACGCCGAGT-T-TTATCTGC----CTCGCGCCAA---AAGCCAGCAAAAATAAACTAAAAATGGAATT---------
droPer2 scaffold_40:478375-478651 - dpe_1647 CGTCCAACCGTGCACCCAAGTCTGGTTTTGCCGCCGAGGCCCAACGCAAAGTAAGTACTAAAA------CAACTAC-----------------------------------------------------------------------------------------AAC-----AAACAGCAGAATAAACAAATTGCCGA-AAAACAGAAA-CAGAA---ACTGAAACTGAA---------------AC--------TGGGGCCCGACGTGCTATGGGAGTGTGGGGTGGTTGGGG----TG-----------------TGTG--CT-TTGGAGGCTGCTCGGCTGCATCATTGACTTTATTTGGCGATT-C-----GACGCCGAGT-T-TTATCTGC----CTCGCGCCAA---AAGCCAG-CAAAATAAACTAAAAATGGAATT---------
droWil2 scf2_1100000004762:4212479-4212750 - CGTCCAATCGTGCACCAAAGTCTGGTTTTGCCGCTGAGGCCCAGCGTAAAGTAAGTACAATAATAAAAGCAACAACAAC--------------------------------------------------------------------------------------AACAAACGA---AACACAGTAAACAAATTGCCAA-AAAATA-AA-------ACGTC--------AGGCT-GT-----GTATGTAGTGTGCTA---GCA---------------------------TG-TG----TGTGT--GTGTGGTGTT--TGT---AT-TTGGAA-----------GCTGCATTGACCAAATTTGGTCATTGA--------GTTGAGTTT-TTATCTG-----CTCGCGCCAAAAAAAGCGC--AAAATTTGACTGAAAATGGACTTGAAATTGCG
droVir3 scaffold_13049:1975339-1975534 - CGTCGAATCGTGCTCCAAAGAGTGGCTTTGCGGCCGAAGCGCAGCGCAAGGTAACCAAAAT----------------------------------------------------------------------------------------------------------------------------------TTTGCCAA-AAACAA--A-------TATAC------------TGTT-----------------------GAA---------------------------TG-CCTGTGTATGT--GTG---------TGT---GC-TTGTT-------AA---GCTGCATTGCCTTTATTTGGGCATT-T-----AAAGCCGAGTT--GCGTCTGCTC-TCGCGCGCCAA------------AAACCAGACTAAAAATGGTCTT---------
droMoj3 scaffold_6654:1859505-1859703 + CTTCGAATCGTGCTCCAAAGAGTGGCTTTGCGGCCGAAGCGCAGCGCAAGGTAACCAAATT----------------------------------------------------------------------------------------------------------------------------------TTTGCCAA-AAAACA--T-------AATAT------------TGT---------------ATGCAT---GCA---------------------------TG-TG----TGTGA--GTG-----TGTGTGA---CT-GTTA-A-----------GCTGCAATGCCTTTATTTGGGCATT-T-----GGAACCGAGTTG--CGTCTTTTC-TCGCGCGCCAA------------AATTCAGGCTAAAAATGGTCTT---------
droGri2 scaffold_15110:3037314-3037508 - CGTCGAATCGTGCTCCAAAGAGTGGCTTTGCCGCCGAAGCGCAGCGTAAGGTAACCAAATT-----------------------------------T----------------------------------------------------------------------------------------------CTTGCCAA-AAAAAT--A-------TATAT------------TGTT-GAATGT-----------AT---G--------------TGTGTA---------TG-TG----AATGTGTGTG---------TGT---GT-TTTGTT------AAACTGTTGCATTGACTTAATTTGGGCATT-T-----GAA-------------------------ACGCCGA---AAGCAA---AAACCAGGCTAAAAATGGTTTT---------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CGTCCAACCGAGCTCCCAAGTCTGGTTTCGCTGCCGAGGCTCAGCGCAAAGTAAGTACAATAC----A--ACCAAAATCCAA-----------ACCCCA-AA-----TACAAAAAAA-----------------------AAA----AA----------------------CAAAACAACCCAGTAAACAAATTGCCAA-AAAAAA--A-AAAGAAACAAC------------TTTTTG---------------------GAG---------------------------CG-TG----TGTGT--GAG---------TGA---GTTTTGGA------------GCTGCATTGACTTTATTTGGC-----------------AAGT-T-TTATCTC-----CA------------ACCCAGTAAAAATTAGCTAAAAATGGTCTCAAAATTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................GGTTTCGCTGCCGAGGCTCAGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2413.003210000
...........GCTCCCAAGTCTGGTTTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002110000
................CAAGTCTGGTTTCGCTGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........GAGCTCCCAAGTCTGGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................GTTTCGCTGCCGAGGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.................AAGTCTGGTTTCGCTGCCGAGGCTCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
........................GTTTCGCTGCCGAGGCTCAGCGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
CGTCCAACCGAGCTCCCAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.GTCCAACCGAGCTCCCAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........GAGCTCCCAAGTCTGGTTTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................CAAGTCTGGTTTCGCTGCCGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......CCGAGCTCCCAAGTCTGGTTTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................AAAA-----------------------AAA----AA----------------------CAAAACAACC.................................................................................................................................................................................................................................................................................1930.331010000
................................................................................................................AAAAA-----------------------AAA----AA----------------------CAAAACAACC.................................................................................................................................................................................................................................................................................2030.331010000
.........................................................................................................................................................................................................AAAAA--A-AAAGAAACAAC------------T............................................................................................................................................................................................................................1840.251010000
droBip1
CGTCCAACCGAGCTCCCAAGTCTGGTTTCGCTGCCGAGGCTCAGCGCAAAGTAAGTACAAT-------------------------------------C-CA-----GCCAAAAAAAAA----------------------AA----AA---------------CCTC---CAAAACAACACAGTAAACAAATTGCCAA-AAAAAA--A-------ACAGC------------TTTTTGGATAT--GC--------TGGGG----ATATGCTA-----------------TT-G------GTGT--TAG---------TGA---GT-TTGGA------------GCTGCATTGACTATATTTGGCA----------------AAGT-T-TTATCTG-----CTG------------GTTA--AAAAATTAGCTAAAAATGGTCTCGAAATTGCCSizeHit CountTotal NormTotal
No Reads
droKik1
CATCCAACCGAGCAGCCAAGTCTGGGTTCGCCGCCGAGGCCCAGCGCAAAGTAAGT---------------------------------------------------------------------------------------------------------------------------------AAACAAATTGCCAA-AAAAAA--A------GTTCAC------------T-GT-----------------------GTT---------------------------TG-T------GTGT--GTG---------TGT---TG-TTGGA------------GCTGCATTGACTTTATTTGGTGCTT-T---TTGACGCCAACTTT-TAATGTGCTCCACTCGCGCCAA---ATGCCA--AAAAATTAGCTAAAAATGGTCTTGAAATTACGSizeHit CountTotal NormTotal
No Reads
droFic1
CATCAAACCGTGCAGCCAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTAAGTACAACAA----AACTATAAC---------------------------------CAAAACCCCAAAAG-C----------CAAAATCA----AA----------------------CAAAACAACGAAATAAACAAATTGCCCA-AAAAA---A-------ACCTC------------T-TT-----------------------GGT---------------------------TG-G------------GAG---------TGA---GT-TTGGAG-----------CCTGCATTGCCTTTATTTGGCGCTC-C-----GACGCCAAGTTT-TAATCTG-----CTCGCGCCAA---ATGCCA--AAAAATTAGCTAAAAATGGTCTTGA-ATTGCCSizeHit CountTotal NormTotal
No Reads
droEle1
CATCCAACCGAGCTGCTAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTAAGTACAACAA----A--AAAAACACCCA-----------------------------AAAAACAAAAAAG------------TAAAACCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCCCAAAA----A-------TCCGC------------T-TT-----------------------GCA---------------------------TG-GG----GGTTC--GAG---------TGA---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTA-C-----GACGCCAAGTTT-TTATCTG-----CTCGCGCCAA---ATGCCA--AAAAATTAGCTATAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotal
No Reads
droRho1
CATCCAACCGAGCAGCTAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACAACAA----AAC-------------------------------A-----CCCAAAA----AAAAG------------T----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCC-AAAA----A-------TCCGC------------T-TC-----------------------GCA---------------------------TG-GG----TGTTC--GAG---------TGA---GT-TTGGGA-----------GCTGCATTGACTATATTTGGCGCTA-C-----GACGCCAAGTTT-TTATATG-----CTCGCGCCAA---ATGCCA--AAAAATTAGCCAGAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotal
No Reads
droBia1
CTTCCAACCGTGCAGCAAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAGGTAAGTACAAAAG----CGT------------------AG---C-CCCACCTCCCCACC-AAG------TGAG-C----------C----CCA----AA----------------------CAAAACAGCCCGATGTACAAATTGCCCA-AAAAA---A-------GCCCA------------TTTT-----------------------GCC---------------------------TG-TG----TGTGC--GAGTGA-GTT--TGG-AGGC-CTGGAG-----------CCTGCAGTGACTCTATTTGGCGCTG-CGATACGACGCCAGG--T-TTATCTG-----CTCGCGCCAA---ATGCCA--AAAAACTAGCCAAAAATGGTCTCGAAACGGCCSizeHit CountTotal NormTotal
No Reads
droTak1
CTTCCAACCGTGCAGCAAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTAAGTACAAAC-----AAAAAAAAAAACCCA-----AAG---A-CCCC-CT-----CCCAAGAAATATAAAC-CC---------C----CCA----AA----------------------CAAAACAGCACAATAAACAAATTGCCCA-AAAA----A-------TCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGTGC--GAGTGA-GTT--TGT-TACT-TTGGAA-----------GCAGCATTGACTTTATTTGGCGCTA-C-----GACGCCAAGTTTTTTATCTG-----CTCGCGCCAA---ATGCCA--AAAAATTTGCTAAAAATGGTCTTGAATTTGCCSizeHit CountTotal NormTotal
No Reads
droEug1
CGTCCAACCGTGCAGCCAAGTCTGGTTTCGCCGCCGAGGCCCAGCGCAAAGTACGTACAAACT----A--------------------AG---C-CCCC-CTTTCCTTA-AAG------TAAACCCCACCAAAAACAA--AAC----A---A------------CAA----------CACACAATAAACAAATTGGCCG-AAAA----A-------TCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGTGCGAGAG---------TGA---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTA-C-----GACGCCAAGTTT-TTATCTC-----CGCGCGCCAA---ATGCCA--AAAAATTAGCTAAAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotal
No Reads
dm3
CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACCAAAT----AGCAACAACAACCGC-----------ACCCCC-CA-----CCCAAAAACCGAAGAG-C----------G----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCA-AAAAAA-AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGT--GCG---------TGA---GT-TTAGA------------GCTGCATTGACTTTATTTGGCGCTG-C-----GTTGTCAAGATT-TTATCTT-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........TGCAGCGAAGTCTGGTTTTGCCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................25114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014
......ACCGTGCAGCGAAGTCTGGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCGAAGTCTGGTTTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....AACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000010000000000000000000001000000000000
.GTCCAACCGTGCAGCGAAGTCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GT--GCG---------TGA---GT-TTAGA------------GCTG..........................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................GAAGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................................TTGACTTTATTTGGCGCTG-C-----G.............................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAACCGTGCAGCGAAGTCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACCGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................A-----CCCAAAAACCGAAGAG-C----------G----C.........................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......ACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000
.GTCCAACCGTGCAGCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATTGACTTTATTTGGCGCTG-C-----..............................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTACCAAAT----AGCAACAACAACCGC-----------.........................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACCGTGCAGCGAAGTCTGGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGTGT--GCG---------TGA---GT-TTAGA------------GCT...........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010
...............................................................................................................................................................................................................AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGT........................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TTTGGCGCTG-C-----GTTGTCAG......................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
...CCAACCGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTCCAACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
....CAACCGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GTCCAACCGTGCAGCGAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CA---------------------------CG-GG----TGTGT--GCG---------TGA---..................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCGTGCAGCGAAGTCTGGTTTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................AAAA-AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-G................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCTGGTTTTGCCGCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.GTCCAACCGTGCAGCGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................ACCGAAGAG-C----------G----CCA----AA----------------------CAAAA......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................ATAAACAAATTGCCCA-AAAAA.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCTGGTTTTGCCGCCGAGGCCCAGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AA-AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----T..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAACCGTGCAGCGAAGTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGACTTTATTTGGCGCTG-C-----GTTGCT........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AAGATT-TTATCTT-----CGCGCGCC.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................AGTCTGGTTTTGCCGCCGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............AGCGAAGTCTGGTTTTGCCGCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GA---GT-TTAGA------------GCTGCATTGACT..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................AAGTCTGGTTTTGCCGCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................AAGTCTGGTTTTGCCGCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................C-CA-----CCCAAAAACCGAAGAG-C----------G----..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGGTCTTGAAATTGCC2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TT-----------------------GCA---------------------------CG-GG----TGTGT--GCG---------TGA---G.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGT--G...................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AGATT-TTATCTT-----CGCGCGCCAA---........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........GTGCAGCGAAGTCTGGTTTTGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CA-----CCCAAAAACCGAAGAG-..........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTTTTGCCGCCGAGGCCCAGCGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................CA-----CCCAAAAACCGAAGAG-C----------...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........CGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAAGTCTGGTTTTGCCGCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..TCCAACCGTGCAGCGAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.GTCCAACCGTGCAGCGAAGTCTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................ACCAAAT----AGCAACAACAACCG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................CAGCGCAAAGTAAGTACCAA.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAAATGGTCTTGAAATT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................T-----------------------GCA---------------------------CG-GG----TGTGT--GCG---------TGA---..................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................G---------TGA---GT-TTAGA------------GCTGCATTGA....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GCATTGACTTTATTTGGCGCT......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................AACCGAAGAG-C----------G----CCA----AA----------------------CAAAAC.....................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...CCAACCGTGCAGCGAAGTCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCGCTG-C-----GTTGTCAAGAT...................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................CA-----CCCAAAAACCGAAGAG-C----------G----C.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................ACCGAAGAG-C----------G----CCA----AA----------------------CAAA.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAA---ATGCCA---AAAAT..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GAGGCCCAGCGCAAAGTAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..TCCAACCGTGCAGCGAAGTCTGGTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGTGCAGCGAAGTCTGGTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCAGCGAAGTCTGGTTTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................AAGATT-TTATCTT-----CGCGCGCCAA---ATG.....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTCTGGTTTTGCCGCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GT--GCG---------TGA---GT-TTAGA------------GCTGCA........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATTGACTTTATTTGGCGCTG-....................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGAAGTCTGGTTTTGCCGCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................CA-----CCCAAAAACCGAAGAG-C----------G----CC........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............GCGAAGTCTGGTTTTGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGGTCTTGAAATTGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....AACCGTGCAGCGAAGTCTGGTTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....CAACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
CGTCCAACCGTGCAGCGAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................TTTTGCCGCCGAGGCCCAGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TG.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................A---------------------------CG-GG----TGTGT--GCG---------TGA---GT-TT.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACCGTGCAGCGAAGTCTGGTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................CG-GG----TGTGT--GCG---------TGA---GT-TTA............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCCAACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TTGGCGCTG-C-----GTTGTCAAGA....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGA---GT-TTAGA------------GCTGCATTGAC...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GAGGCCCAGCGCAAAGTAAGTACCAAAT----...................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................TTTTGCCGCCGAGGCCCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............CGAAGTCTGGTTTTGCCGCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................TTGCCGCCGAGGCCCAGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TGGCGCTG-C-----GTTGTCAAGATT-.................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCCA---AAAATTAGCCAAAA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AGCGCAAAGTAAGTACCA..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AGA------------GCTGCATTGACTTTATTTGGC.........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................AGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CA---------------------------CG-GG----TGTGT--GCG---------TGA---GT-...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................A-AA-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGT........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCAGCGAAGTCTGGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........TGCAGCGAAGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........CGTGCAGCGAAGTCTGGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.GTCCAACCGTGCAGCGAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................GCTGCATTGACTTTATTTGG..........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................GCCGCCGAGGCCCAGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................T-TTATCTT-----CGCGCGCCAA---ATG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATTTGGCGCTG-C-----GTTGTCAAGA....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.GTCCAACCGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCGAAGTCTGGTTTTGCCGCCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............CAGCGAAGTCTGGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTATTTGGCGCTG-C-----GTTGCT........................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACCAAAT----AGCAACAACAACCGC-----------ATCCCC-CA-----TCCAAAAACCGAAGAG-C----------G----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCCCA-AAAA----A-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGT--TCG---------TGA---GT-TTGGA------------GCTGCATTGACTTTATTTGGCGCTG-C-----GTTGCCAAGATT-TTATCTC-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................G----TGTGT--TCG---------TGA---GT-TTGGA------------GCT...........................................................................................................2211.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................TGACTTTATTTGGCGCTG-....................................................................................1811.00101000000000000000
.GTCCAACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......ACCGTGCAGCGAAGTCTGGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................CTTTATTTGGCGCTG-C-----GTT...........................................................................1911.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................TGCATTGACTTTATTTGGCG........................................................................................2011.00100000100000000000
.....AACCGTGCAGCGAAGTCTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
droSec2
CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACCAAAT----AGCAACAACAACCGC-----------ACCCCC-CA-----CCCAAAAACCGAAGAG-C----------G----CCA----AA----------------------CAAAACAACACAATAAACAAATTGCTCA-AAAA----A-------TCAAC------------TTTT-----------------------GCA---------------------------CG-GG----TGTGTGTTCG---------TGA---GT-TTGGA------------GCTGCATTGACTTTATTTGGCGCTG-C-----GTTGCCAAGATT-TTATCTC-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................GTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
...........................TTGCCGCCGAGGCCCAGCGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..................AGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..............GCGAAGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
............................TGCCGCCGAGGCCCAGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.GTCCAACCGTGCAGCGAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....AACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010010
droYak3
CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACAAAAT----AACAATAACAAC---AAGC--AG---ACCCCC-CA-----CCCAAAAAATATAAAG-C----------G----CCAAACAAACAACAACAGCAACAACAAC------AAGAGCACATTAAACAAATTGCCAA-AAAAAA--A-CCAAAATCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGTGC--GCA-----TT--AGT---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTG-C-----GATGCCAAGATT-TTATCTC-----CGCGCGCCAAA--ATGCCA--AAAAATTAGCCAAAAATGGTCTTGAAATTGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.GTCCAACCGTGCAGCGAAGTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00404000000000
.....AACCGTGCAGCGAAGTCTGGTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00201000010000
.....AACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200001010000
..................................................................................................................................................................................................................CCAAAATCCAC------------TTTT-----------------------GCA---------------------------TG-GG----TGT........................................................................................................................................................2511.00100000010000
.............AGCGAAGTCTGGTTTTGCCGCCGAG................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
....CAACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................GT-TTGGAA-----------GCTGCATTGACTTTATTTGG..........................................................................................2811.00100000010000
.GTCCAACCGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAATGGTCTTGAAATTGCC2211.00101000000000
......ACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.GTCCAACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000
.....AACCGTGCAGCGAAGTCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AA--ATGCCA--AAAAATTAGCC.....................1911.00100100000000
....................................................................................................................................................................................................................................................................................................................................GT-TTGGAA-----------GCTGCATTGACT..................................................................................................2011.00101000000000
.....................CTGGTTTTGCCGCCGAGGCCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGGTCTTGAAATTGCC2111.00100000010000
....CAACCGTGCAGCGAAGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................AACAGCAACAACAAC------AAGAGC..................................................................................................................................................................................................................................................................................2130.33100000010000
droEre2
CGTCCAACCGTGCAGCGAAGTCTGGTTTTGCCGCCGAGGCCCAGCGCAAAGTAAGTACAAAAT----AGCAACAACCAC---ATGCGAAGTGAACTCCC-CA-----CCCAAAAACTAAAAAG-C----------G----CCAAACAAACAA---------------------CAACAACACATTAAACAAATTGCCCA-AAAA----A-------TCCAC------------TTTT-----------------------GCA---------------------------TG-GGTGTGCGTGC--GCG---------TGA---GT-TTGGAA-----------GCTGCATTGACTTTATTTGGCGCTG-C-----GATGCCAAGATT-TTATCTC-----CGCGCGCCAA---ATGCCA---AAAATTAGCCAAAAATGGTCTTGAATTTGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............GCGAAGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030002010
................GAAGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
.........GTGCAGCGAAGTCTGGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000110
.............AGCGAAGTCTGGTTTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
...CCAACCGTGCAGCGAAGTCTGGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000
...CCAACCGTGCAGCGAAGTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.....AACCGTGCAGCGAAGTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................AGTCTGGTTTTGCCGCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................................................................................................................................GC--GCG---------TGA---GT-TTGGAA-----------GCTGCATTGACT..................................................................................................2811.0011000000
..................AGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.GTCCAACCGTGCAGCGAAGTCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...................GTCTGGTTTTGCCGCCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.....AACCGTGCAGCGAAGTCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.............AGCGAAGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.GTCCAACCGTGCAGCGAAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................GATT-TTATCTC-----CGCGCGCCAA---AT......................................2311.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................GATT-TTATCTC-----CGCGCGCCAA---........................................2111.0010001000
dp5
CGTCCAACCGTGCACCCAAGTCTGGTTTTGCCGCCGAGGCCCAACGCAAAGTAAGTACTAAAA------CAACTAC-----------------------------------------------------------------------------------------AAC-----AAACAGCAGAATAAACAAATTGCCGA-AAAACAGAAA-CAGAA---ACT------GAA---------------AC--------TGGGGCCCGACGTGCTATGGGAGTGTGGGGTGGTTGGGG----TG-----------------TGTG--CT-TTGGAGGCTGCTCGGCTGCATCATTGACTTTATTTGGCGATT-C-----GACGCCGAGT-T-TTATCTGC----CTCGCGCCAA---AAGCCAGCAAAAATAAACTAAAAATGGAATT---------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................CTCGGCTGCATCATTGACTTTATTTGGC.........................................................................................2812.0020000000002
..........................TTTGCCGCCGAGGCCCAACGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..........................TTTGCCGCCGAGGCCCAACGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
.................AAGTCTGGTTTTGCCGCCGAGGCCCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.GTCCAACCGTGCACCCAAGTCTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................TGGTTTTGCCGCCGAGGCCCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
....................TCTGGTTTTGCCGCCGAGGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................CAAGTCTGGTTTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................TTGCCGCCGAGGCCCAACGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........CGTGCACCCAAGTCTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....CAACCGTGCACCCAAGTCTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............CACCCAAGTCTGGTTTTGCCGCCGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..................AGTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............ACCCAAGTCTGGTTTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................TTGCCGCCGAGGCCCAACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CGTCCAACCGTGCACCCAAGTCTGGTTTTGCCGCCGAGGCCCAACGCAAAGTAAGTACTAAAA------CAACTAC-----------------------------------------------------------------------------------------AAC-----AAACAGCAGAATAAACAAATTGCCGA-AAAACAGAAA-CAGAA---ACTGAAACTGAA---------------AC--------TGGGGCCCGACGTGCTATGGGAGTGTGGGGTGGTTGGGG----TG-----------------TGTG--CT-TTGGAGGCTGCTCGGCTGCATCATTGACTTTATTTGGCGATT-C-----GACGCCGAGT-T-TTATCTGC----CTCGCGCCAA---AAGCCAG-CAAAATAAACTAAAAATGGAATT---------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................GTAAGTACTAAAA------CAACT............................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.......................................................................................................................................................................................................................A---ACTGAAACTGAA---------------AC--------TGGGGCCCGAC...........................................................................................................................................................................................2612.002200000
.................................................................................................................................................................................................................................................................................................................................G--CT-TTGGAGGCTGCTCGGC...............................................................................................................1912.002200000
....................................................................................................................................................................................................................................................................................GAGTGTGGGGTGGTTGGGG----T..........................................................................................................................................................2011.001000001
.................AAGTCTGGTTTTGCCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
......................................................................................................................................................................................................A-AAAACAGAAA-CAGAA---ACTGAAACT..................................................................................................................................................................................................................................2511.001010000
...................GTCTGGTTTTGCCGCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
....................................................................................................................................................................................................................AGAA---ACTGAAACTGAA---------------AC--------T.....................................................................................................................................................................................................1970.292200000
droWil2
CGTCCAATCGTGCACCAAAGTCTGGTTTTGCCGCTGAGGCCCAGCGTAAAGTAAGTACAATAATAAAAGCAACAACAAC--------------------------------------------------------------------------------------AACAAACGA---AACACAGTAAACAAATTGCCAA-AAAATA-AA-------ACGTC--------AGGCT-GT-----GTATGTAGTGTGCTA---GCA---------------------------TG-TG----TGTGT--GTGTGGTGTT--TGT---AT-TTGGAA-----------GCTGCATTGACCAAATTTGGTCATTGA--------GTTGAGTTT-TTATCTG-----CTCGCGCCAAAAAAAGCGC--AAAATTTGACTGAAAATGGACTTGAAATTGCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................AAATTTGGTCATTGA--------GTTGA......................................................................2011.00100100
................AAAGTCTGGTTTTGCCGCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....................................................................................................................................................................................................................................................................................................................................AT-TTGGAA-----------GCTGCATTGACC..................................................................................................2011.00100100
...................GTCTGGTTTTGCCGCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
CGTCGAATCGTGCTCCAAAGAGTGGCTTTGCGGCCGAAGCGCAGCGCAAGGTAACCAAAAT----------------------------------------------------------------------------------------------------------------------------------TTTGCCAA-AAACAA--A-------TATAC------------TGTT-----------------------GAA---------------------------TG-CCTGTGTATGT--GTG---------TGT---GC-TTGTT-------AA---GCTGCATTGCCTTTATTTGGGCATT-T-----AAAGCCGAGTT--GCGTCTGCTC-TCGCGCGCCAA------------AAACCAGACTAAAAATGGTCTT---------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................AAAGAGTGGCTTTGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1815.005100000000000000000003000000001000000000000000000000000000000000
....GAATCGTGCTCCAAAGAGTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000001000000000000000000000000000000000000000000000010
........CGTGCTCCAAAGAGTGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002001000010000000000000000000000000000000000000000000000000000000
....GAATCGTGCTCCAAAGAGTGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000010000000000000000000000000000000000000000000000000000000
.....................GTGGCTTTGCGGCCGAAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATT-T-----AAAGCCGAGTT--GCGTCTG..........................................................2211.001000000000000000000000000000100000000000000000000000000000000000
.GTCGAATCGTGCTCCAAAGAGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.....AATCGTGCTCCAAAGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
................AAAGAGTGGCTTTGCGGCCGAAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.....................GTGGCTTTGCGGCCGAAGCGCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
............................TGCGGCCGAAGCGCAGCGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
..........................TTTGCGGCCGAAGCGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000001000000000000000000000000000000000000000000
.....AATCGTGCTCCAAAGAGTGGCTTTGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
CGTCGAATCGTGCTCCAAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGCCGAGTT--GCGTCTGCTC-T.....................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................GAGTGGCTTTGCGGCCGAAGCGCAGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................ATTTGGGCATT-T-----AAAGCCGAGTT--GCG..............................................................2611.001000000000000000000000100000000000000000000000000000000000000000
....................AGTGGCTTTGCGGCCGAAGCGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..............CCAAAGAGTGGCTTTGCGGCCGAAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
CTTCGAATCGTGCTCCAAAGAGTGGCTTTGCGGCCGAAGCGCAGCGCAAGGTAACCAAATT----------------------------------------------------------------------------------------------------------------------------------TTTGCCAA-AAAACA--T-------AATAT------------TGT---------------ATGCAT---GCA---------------------------TG-TG----TGTGA--GTG-----TGTGTGA---CT-GTTA-A-----------GCTGCAATGCCTTTATTTGGGCATT-T-----GGAACCGAGTTG--CGTCTTTTC-TCGCGCGCCAA------------AATTCAGGCTAAAAATGGTCTT---------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................GGCCGAAGCGCAGCGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...................GAGTGGCTTTGCGGCCGAAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................GGCTTTGCGGCCGAAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
CGTCGAATCGTGCTCCAAAGAGTGGCTTTGCCGCCGAAGCGCAGCGTAAGGTAACCAAATT-----------------------------------T----------------------------------------------------------------------------------------------CTTGCCAA-AAAAAT--A-------TATAT------------TGTT-GAATGT-----------AT---G--------------TGTGTA---------TG-TG----AATGTGTGTG---------TGT---GT-TTTGTT------AAACTGTTGCATTGACTTAATTTGGGCATT-T-----GAA-------------------------ACGCCGA---AAGCAA---AAACCAGGCTAAAAATGGTTTT---------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................AAGAGTGGCTTTGCCGCCGAAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..............CCAAAGAGTGGCTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..............CCAAAGAGTGGCTTTGCCGCCGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
......ATCGTGCTCCAAAGAGTGGCTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
.................AAGAGTGGCTTTGCCGCCGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
......................TGGCTTTGCCGCCGAAGCGCAGCGTA......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
...........................TTGCCGCCGAAGCGCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...CGAATCGTGCTCCAAAGAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/18/2015 at 05:10 AM