ID:

dan_2612

 Coordinate:

scaffold_13337:13076217-13076367 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.6 -20.6 -20.5

Flybase annnotation

CDS [Dana\GF23980-cds]; exon [dana_GLEANR_8740:2]; intron [Dana\GF23980-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACTGTTTTCGACGATAAAATATTGCAATGTTCCACAGTACCCAATGAGAGGTGTCTTTATGACCAATATTAAATATTAACTTTCAATAAAGAGCATTTGAGCAGTTACTATTAGTTTCAGTTAATTTTCGCAACTCAAAGTCAATTGTCTAAATGCACAAATGCCCGACAATTGAGAATCACTTAGCATACATTTAAAAGTTTTCACTTTTAAGGCTTAACACATTCCTCTTCGGCACTCCCTTTGGTATC
**************************************************((((((((((.........................)))))))...((((((..((....(((((......)))))....))..)))))).(((((((((.....(((....)))..)))))))))....)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 M058
embryo
 V039
embryo
.....................................................................................ATAAAGAGCATTTGAGCAGTT................................................................................................................................................. 21 0 1 4.00 4 2 2 0 0
...................................................................................CAATAAAGAGCATTTGAGC..................................................................................................................................................... 19 0 1 2.00 2 0 2 0 0
.............................................................................AACTTTCAATAAAGAGCATTTGAGCAGT.................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0
............................................................................TAACTTTCTATAAAGAGCATTTGAGC..................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0
..........................................................................ATTAACTTTCAATAAAGAGC............................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0
....................................................................................AATAAAGAGCATTTGAGCAGTT................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0
.................................................................................TTCAATAAAGAGCATTTGAGAA.................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0
...................................AGTACCCAATGAGAGGTGTCTT.................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0
............................................................................TAACTTTCAATAAAGAGCATTTGAGCA.................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
.................................................................................TTCAATAAAGAGCATTTGAGCAGTTACT.............................................................................................................................................. 28 0 1 1.00 1 0 0 1 0
.............................................................................AACTTTCAATAAAGAGCATTTGAGC..................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................................................................ATAAAGAGCATTTGAGCAGT.................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
........................................................................................AACAGCATTTGAGCAGTTACA.............................................................................................................................................. 21 2 1 1.00 1 0 0 0 1
................................................................................................TTGGGCAGTTACAATTACTTT...................................................................................................................................... 21 3 7 0.14 1 0 0 0 1
................................................................................................TTCAGGAGTTACTATTAGC........................................................................................................................................ 19 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

TGACAAAAGCTGCTATTTTATAACGTTACAAGGTGTCATGGGTTACTCTCCACAGAAATACTGGTTATAATTTATAATTGAAAGTTATTTCTCGTAAACTCGTCAATGATAATCAAAGTCAATTAAAAGCGTTGAGTTTCAGTTAACAGATTTACGTGTTTACGGGCTGTTAACTCTTAGTGAATCGTATGTAAATTTTCAAAAGTGAAAATTCCGAATTGTGTAAGGAGAAGCCGTGAGGGAAACCATAG
**************************************************((((((((((.........................)))))))...((((((..((....(((((......)))))....))..)))))).(((((((((.....(((....)))..)))))))))....)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 V055
head
 V106
head
 V039
embryo
...................................................................................................................................................................................GTGAATCGTATGTAAATC...................................................... 18 1 1 11.00 11 6 0 3 2 0
..................................................................................................................................................................................GGTGAATCGTATGTAAATC...................................................... 19 2 5 6.00 30 8 21 1 0 0
...................................................................................................................................................................................GTGAATCGTATGTAAATCC..................................................... 19 2 8 4.38 35 24 9 2 0 0
..................................................................................................................................................................................GGTGAATCGTATGTAAAT....................................................... 18 1 2 3.00 6 4 1 1 0 0
............................................................................................................................................................................................................................GTGACAGGAGAAGACGTGAG........... 20 3 17 2.76 47 29 18 0 0 0
.................................................................................................................................................................................AGGTGAATCGTATGTAAAT....................................................... 19 2 6 2.17 13 3 9 1 0 0
..........................................................................................................................................................................TCACTCTTAGTCAATCGTA.............................................................. 19 2 2 0.50 1 0 0 0 0 1
..................................................................................................................................................................................GGTGAATCGTATGTAAA........................................................ 17 1 5 0.20 1 0 0 1 0 0
........................................................................................TTCTAGTAAACTCGTGAATT............................................................................................................................................... 20 3 14 0.14 2 1 0 0 0 1
....................................................................................................................................................................................TGAATCGTATGTAAATCCT.................................................... 19 2 7 0.14 1 0 0 1 0 0
.................................................................................................................................................................................................................................AGGAGAAGCCGTGAGTTCAA...... 20 3 9 0.11 1 0 1 0 0 0
.............................................................................................................................................................................................................................TGACAGGAGAAGACGTGAGG.......... 20 3 13 0.08 1 1 0 0 0 0
...........................................................................................................................................................................................TATGTAAATCTTCAAATG.............................................. 18 2 15 0.07 1 1 0 0 0 0
...................................................................................................................................................................................GTTAATCGTATGTAAATC...................................................... 18 2 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................CGAGCTGTAGACTCTTAGT...................................................................... 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:13076167-13076417 - dan_2612 ACT-----GTTTTCGACGATAAAATATTGCAATGTTCCACAGTACCCAATGAGAGGTGTCTTTATGACC--AATATTAAATATTAACTT-----TCAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGTTAC-TA----------------TTA----------------GTTTCAGTT-------------------------------------------AAT---TT-TCGCAACTCAAAGTCAATTGTCTAAATGCACAAATGCCCGACAATTGAGAATCACTTAGCATACATTT-AA-AAGTTTTCACTTTTAAGGCTTAACACAT--TCC-TCTTC-------------------------------GGCACTCCCTTTGGTATC
droBip1 scf7180000396589:956321-956572 + ACT-----GTCTTTGATGATGAGCTATTGCAATGCTCCGCAGTACCTAATGAGAGGTGTCTTTATGAGC--AATATTAAACAGTATCTT-----TTAAT--------------------------------------------------------------------AAAGATC--ATCTGAGCACTTAC-TA----------------TTT---------------GGTTTAAGTT-------------------------------------------AAT---TT-TCAACCCCCGAAGTAAATTGTCTAAATGCACAAATGCCCAGCAATTGAGAATCACTTAGCATACATTT-GA-AACTTTTCACTTTTAAGGCTTAACGCAT--TCG-CTTTCTAAA-------------------------------TTCCTTTCGGTATC
droKik1 scf7180000302266:67410-67499 + ACG-----ATCTTTGATGACAAATTGCTTCAGTGCACAGCAACACCCAATGAGAGGTGCCTATTTCTTT--CATTATAAATG-TATAAT-----TTAAT--------------------------------------------------------------------AAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454107:71475-71741 + ACA-----GTTTTTGATGAGAAACTTCTTCAGTGTACAGCTACGCCCAATGAAAGGTGTCTATTTGCTG--AATTTTAAGTAATATGAA-----TCAAT-----------------------------------------------------------------A--AAAAAAGCAAGCCCAGCAATA-CAAAG----------------TGTCGCCCCTTC-CG------------T------------------------------------------CCT--TTT-CCAACCCTCAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATTGAGAATCACT----------------------GCACTTCAAGTGCTTTATAAGT--CC--CTTTTTAAGTG--TTCAACATTTTAGGCATATACAGTGCTCCAGTTCTGGTATC
droEle1 scf7180000491268:945264-945607 + ACG-----GTATACGATGAGAAACTTCTTCGGTGCGCAGCTATGTCAAATGAGAGGTGCCTTCTAATGC--AATTTTAAAAAATATATA-----TTAAA--------------------------------------------------------------------CAAAAATTAGACACAGCTATA-CTGAGCCTAGAAGCGCCTAT-TATTTCCATGTA-TA------------ACATTTTGTGTCAATAAAAAAGAAAACATTAAGATTTTCGATTTCA---TT-CCACCGCTCAAAATCAATTGTGTAAGTGCACAAATGCTCAATCATTGAGAATCGCTTAACATATTTAT-TT-CATCCTTCTGTTCTACGGCTTCTTTAATGTCC--CCTTTTAAGTG--TTTAACACTTTAGACATATGCCTTGCTCCACTTCTGGTTTC
droRho1 scf7180000779528:65746-66046 + ACT-----GTTTTCGATGAGAAGCTTCTTGAGTGCACAGCACAGTCAAATGAGAGGTGTCTATTATTTC--AATTTTAAATGATATGTA-----CTAAT--------------------------------------------------------------------AAAGAAGTAATCAGAGCAATA-CTAAATG-AGAGGTGTCTGA-TTTTGCAATTTC-TT------------T------------------------------------------TCT---TT-CCACCCCTCAAAATCAATTGTGTAAGTGCACAAATGCTCAGTAATTGAGAAACGGTTATCATATTAAT-TTCACTTCTTTACTTATACGGCTTTTTTAAT--GCC-CTTTTTAAGTG--TTCAACGGTTTGGGTATATACCTTGCCCCATTTCTGGTATC
droBia1 scf7180000302428:1490519-1490810 - ATG-----GTCTTCGATGATAAGCTTCTTCAGTGCACAGCTATGCCAAATGAAAGGTGTCTGTATGTGG--ATTATTAAATAATATATA-----T------------------------------------------------------------AGTATGTATAATAAAATAGAATGAACAGCAATA-CTTC-------------------ACTTCATTAG-TT------------T------------------------------------------TCT--TTT-CTAACCCTCAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATTGAGAGTCGTTTATCCAATTTTA-TT-TGCCTCTCACTTCTAGGGCTTTTCAAAC--GCT-TTTTTGCAGTG--TTAAGCATTTAAGACATACACTTTGAACCAGTTATCGTATC
droTak1 scf7180000415857:4852-5140 - ACG-----GTCTTCGATGACAGGCTTCTTGGGTGCTCAGCTGTGCCCAATGAGAGGTGTCTATATGTGG--ATTATTAAATAATTTGAA-----TTAAT--------------------------------------------------------------------AAAGTCATACGAACAGCAATA-CTAAA---------------TC-TACCCAGTCCCTT------------T------------------------------------------TCT--TTC-CTACCCCACAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATCGAGAATCACTTAACATATTTTTGTT-CATCCGTCACTTCTAGGGCTTTTTAAAT--CCT-TTTTTTAAGTG--TTCAACATTTTAGACATATACTTTGCTCCAGTTATCGTATC
droEug1 scf7180000409466:3238021-3238291 + ACA-----GTTTTCGATGAGAAGCTTCTCCAATGCACAGCTATGACCAGTGAAAGGTGTCTGTACGTGG--ATTATTAAACA-TATGAT-----TTAAT--------------------------------------------------------------------AAAGCTAAAAGCAAAGCAATA-CTAAG-----------------TTAACTATTT------------------------------------------------------------CC---TT-TTTACCCTCAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATTGAGAATCGCTTAATGTATTCCT-TT-CATCCTTCACTTCTAAGGCTTTGTAAGT--CC--T-TTTTAAGTG--TTCAACTTTTTTCACATATACTTGG------TTGCAGTATC
dm3 chr3L:5476692-5476975 + ACG-----ATTTTCGATGATAATCTTCTTCAATGCACCTCTGTTCCCAATGAAAGGTGTCTTTTTATTG--AATTTTAAAAA-AATATA-----TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGCAATA-A-------------------TCTTTTCCATTTC-TG------------T------------------------------------------TCTTTTTG-CTACCCCAAAAAATCAATTGGGTAAATGCACAAATGCTCAATAGCTGGGAATCGCTTAACATATTCCT-CA-CACATTACACTTCTAGGGCTTTCTAAGT--CC--TTTTTTAAGTG--TTTCACTTTTTAGACATATACTTTGCTCCAGTTTTAGTATC
droSim2 3l:5390071-5390345 + ACG-----ATCTTCGATGATAAACTTCTTCAATGCACCTCTGTGCCCAATGAAAGGTGTATTTTCATTG--AATTTTAAAAA-TATATA-----TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGCAATA-A-------------------TCTTTCCCATTTC-TC------------T------------------------------------------TCTTTTTG-CTACCCCACAAAATCAATTGGGTAAATGCACAAATGCTCAATAGCTGGGAATCGCTTAACATATTCGT-TA-CTTTTAACACTTCT-GGGCTTTCTTAGT--CC--TTTTT----------TCACATTTTAGACATATACTTCGCTCCACTTTTGGTATC
droSec2 scaffold_2:5413050-5413333 + ACG-----ATCTTCGATGATAAACTTCTTCAATGCACCTCTGTGCCCAATGAAAGGTGTCTTTTCATTG--AATTTTAAAAA-AATATA-----TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGCAATA-A-------------------TCTTTCCCATTTC-TC------------T------------------------------------------TCTTTTTG-CTACCCCACAAAATCAATTGGTTAAATGCACAAATGCTCAATAACTGGGAATCGCTTAACATATTCCT-TA-CTTTTTACACTTCTAGGGCTTTCTTAGT--CC--TTTTTTAAGTG--TTTCACATTTTAGATATATACTTCGCTCCACTTTTGGTATC
droYak3 3L:6037510-6037795 + ACG-----ATCTTCAATGATGAACTTCTTCAATGCACCTCTGCGCCCAATGAAAGGTGTCTTTTCATTG--AATTTTAAAAA-AATGTA-----ATAAT--------------------------------------------------------------------AAAGCATACAGCAGAGCAATA-CCAA----------------TCTTTTTTATTTC-AG------------T------------------------------------------TCTTTTTG-CTACCCCACAAAATCAATTGGGTAAATGCACAAATGCTCAATAACTGAGAATCGCTTAATATATTCCT-TA-CTCCTTACACTACTAGGGCTTTGTAAGT--CC--TTTTTTAAGTG--TTGAATATGTTAGACATAAACTGC-CTCCTGCTTTGGTATC
droEre2 scaffold_4784:8161758-8162035 + ACG-----ATCTTCGATGATGAACTTCTTCAATGCACCTCTACGCCCAATGAAAGGTGTCTTTTCGTAG--AATTTTAAAAAATA--TA-----TTAAT--------------------------------------------------------------------GAAGC-------ACAGCAATG-CCAA----------------TCTGTTTCAATTC-TG------------T------------------------------------------TCTTTCTG-CTACCCCACAAAATCAATTGCGTAAATGCACAAATGCTCAATAACTGAGAACCGCTTAACATATTCCT-TA-CTTTTAACACTACTATGGCTTTAAAAGT--CC--TTTTTTAAGTG--GTTCGCATGTTAGACATATACTT-GCCACAGTTTCGGTATC
dp5 XR_group6:8449788-8450019 - ACC-----TTCTTTGATGACAGGCTGCTGCAATGTACATCAATTCCCACTCAAACCTGCATTTATAAAA--GAGCATAAATAATATGAGTATGTTCAAT--------------------------------------------------------------------AAAGAAT--AACCACGCTTTTAT-----------------------------------GTGAAATTGGTA-------------------------------------------GCT---TT-TTTCCATAAAAAATCAATTGTCTAAGTGCCCAAATGCTCAACCACTTAGGGT--------------------------ACACTTTTAGGGCTTTGGATACTGCCTATTTTTTGAATG--T------------------------------TACTGCTATC
droPer2 scaffold_27:271145-271377 + ACC-----TTCTTTGATGACAGGCTGCTGCAATGTACATCAATTCCCACTCAAAGTTGCATTTATAAAA--GAGCATAAATAATATGAGTAAATTCAAT--------------------------------------------------------------------AAAGAAT--AACCATGCATTTAT-----------------------------------GTGAAATTGGTA-------------------------------------------GCT--TTT-TTTCCCTAAAAAATCAATTGTCTAAGTGCCCAAATGCTCAACCACTTAGGGT--------------------------ACACTTTTAGGGCTTTGGATACTGCCTATTTTTTGAATG--T------------------------------TACTGCTATC
droWil2 scf2_1100000004511:4145993-4146101 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-CTCACTTGCCAAATCAATTGTCTAAATGCACAAATGCGTAAC---TCAG---------------------------TTACACTTTTAAGGCTTTGCAATT--GC--CTGTGTGTGTGTGTGTGTTACCT---------------------GAGGAGTATC
droVir3 scaffold_13049:11403541-11403833 + ACA-----GTGTTCGATGTAGAGTATCTGCAGTGCACAACCAACGGCAAAGGATCTTGCATTTAAAAAATAAAGCA-------TTAGAA-----ACCACGAATTCAATGCTCAAATCAAAAAGTTCCTTTTTTTGAAAATTGTATTTATATTTGAAGTATCAATAAAAATAAAGAAAGCACATGAATA-TCTAA--------------------------------CAAGGTGTGA-C------------------------------------------TCT---TT-CCCACTTGCGAAATCAATTGCCTAAATGCACAAATGCAAATCCATTTCAG-ACGCTT---------------TAACAGCAACTTTTAGGGCCTCTGAGAG--C---TA--------------------------------------CTCGAAGTGGTATC
droMoj3 scaffold_6680:9426422-9426713 - ACG-----CTGTTCGACGTTGAGTCTCTGCAGTGCAAAGCCAACCAAAATGCGAACTGTATATTTGAAG--AGTATTGAATACAAACT-------------ATTCCATACCTAAG-TATCGAGCTCCTTTTTATAAACAC----------TTCAAAGCAATCATAAATACAGAGAATGCTCATGTATA-ATGC--------------------------------ATGACGTGGGTC---------------------------GCTTACATTTCTGG--T----TTC-CCCACTTTCAGAATCAATTGTCTAAATGCACAAATGCAAATCCATTTCAG-TCGCTT---------------TAACGGCCACTTTTAGGGCCTCTGAGAC--TG---G--------------------------------------GTGGGGCGGGTATC
droGri2 scaffold_15110:7944550-7944705 - CAATAGAAATCTTTGAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGCTATT-TTCA----------------TTTTGTTCAGT----G------------T------------------------------------------TTTGACCCCCACTCTTATAGAATTAATTGACTAAATGCACAAATGCAAATCCATTTGAG-ACATTTACCAA---------------AGCACTTTAAAGGCCTCTGAGAG--ATT-TT--------------------------------------CTCGAACAGGTATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ACT-----GTTTTCGACGATAAAATATTGCAATGTTCCACAGTACCCAATGAGAGGTGTCTTTATGACC--AATATTAAATATTAACTT-----TCAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGTTAC-TA----------------TTA----------------GTTTCAGTT-------------------------------------------AAT---TT-TCGCAACTCAAAGTCAATTGTCTAAATGCACAAATGCCCGACAATTGAGAATCACTTAGCATACATTT-AA-AAGTTTTCACTTTTAAGGCTTAACACAT--TCC-TCTTC-------------------------------GGCACTCCCTTTGGTATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................AT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGTT.....................................................................................................................................................................................................................................................................2114.004200020
...............................................................................................CAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGC.........................................................................................................................................................................................................................................................................1912.002000020
....................................................................................AACTT-----TCAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGT......................................................................................................................................................................................................................................................................2811.001010000
.................................................................................ATTAACTT-----TCAAT--------------------------------------------------------------------AAAGAGC--.................................................................................................................................................................................................................................................................................2011.001000010
................................................................................................AAT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGTT.....................................................................................................................................................................................................................................................................2211.001100000
........................................AGTACCCAATGAGAGGTGTCTT...................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................TAACTT-----TCAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGCA........................................................................................................................................................................................................................................................................2711.001000010
........................................................................................T-----TCAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGTTAC-T.................................................................................................................................................................................................................................................................2811.001010000
....................................................................................AACTT-----TCAAT--------------------------------------------------------------------AAAGAGC--ATTTGAGC.........................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................AT--------------------------------------------------------------------AAAGAGC--ATTTGAGCAGT......................................................................................................................................................................................................................................................................2011.001100000
droBip1
ACT-----GTCTTTGATGATGAGCTATTGCAATGCTCCGCAGTACCTAATGAGAGGTGTCTTTATGAGC--AATATTAAACAGTATCTT-----TTAAT--------------------------------------------------------------------AAAGATC--ATCTGAGCACTTAC-TA----------------TTT---------------GGTTTAAGTT-------------------------------------------AAT---TT-TCAACCCCCGAAGTAAATTGTCTAAATGCACAAATGCCCAGCAATTGAGAATCACTTAGCATACATTT-GA-AACTTTTCACTTTTAAGGCTTAACGCAT--TCG-CTTTCTAAA-------------------------------TTCCTTTCGGTATCSizeHit CountTotal NormTotal
No Reads
droKik1
ACG-----ATCTTTGATGACAAATTGCTTCAGTGCACAGCAACACCCAATGAGAGGTGCCTATTTCTTT--CATTATAAATG-TATAAT-----TTAAT--------------------------------------------------------------------AAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACA-----GTTTTTGATGAGAAACTTCTTCAGTGTACAGCTACGCCCAATGAAAGGTGTCTATTTGCTG--AATTTTAAGTAATATGAA-----TCAAT-----------------------------------------------------------------A--AAAAAAGCAAGCCCAGCAATA-CAAAG----------------TGTCGCCCCTTC-CG------------T------------------------------------------CCT--TTT-CCAACCCTCAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATTGAGAATCACT----------------------GCACTTCAAGTGCTTTATAAGT--CC--CTTTTTAAGTG--TTCAACATTTTAGGCATATACAGTGCTCCAGTTCTGGTATCSizeHit CountTotal NormTotal
No Reads
droEle1
ACG-----GTATACGATGAGAAACTTCTTCGGTGCGCAGCTATGTCAAATGAGAGGTGCCTTCTAATGC--AATTTTAAAAAATATATA-----TTAAA--------------------------------------------------------------------CAAAAATTAGACACAGCTATA-CTGAGCCTAGAAGCGCCTAT-TATTTCCATGTA-TA------------ACATTTTGTGTCAATAAAAAAGAAAACATTAAGATTTTCGATTTCA---TT-CCACCGCTCAAAATCAATTGTGTAAGTGCACAAATGCTCAATCATTGAGAATCGCTTAACATATTTAT-TT-CATCCTTCTGTTCTACGGCTTCTTTAATGTCC--CCTTTTAAGTG--TTTAACACTTTAGACATATGCCTTGCTCCACTTCTGGTTTCSizeHit CountTotal NormTotal
No Reads
droRho1
ACT-----GTTTTCGATGAGAAGCTTCTTGAGTGCACAGCACAGTCAAATGAGAGGTGTCTATTATTTC--AATTTTAAATGATATGTA-----CTAAT--------------------------------------------------------------------AAAGAAGTAATCAGAGCAATA-CTAAATG-AGAGGTGTCTGA-TTTTGCAATTTC-TT------------T------------------------------------------TCT---TT-CCACCCCTCAAAATCAATTGTGTAAGTGCACAAATGCTCAGTAATTGAGAAACGGTTATCATATTAAT-TTCACTTCTTTACTTATACGGCTTTTTTAAT--GCC-CTTTTTAAGTG--TTCAACGGTTTGGGTATATACCTTGCCCCATTTCTGGTATCSizeHit CountTotal NormTotal
No Reads
droBia1
ATG-----GTCTTCGATGATAAGCTTCTTCAGTGCACAGCTATGCCAAATGAAAGGTGTCTGTATGTGG--ATTATTAAATAATATATA-----T------------------------------------------------------------AGTATGTATAATAAAATAGAATGAACAGCAATA-CTTC-------------------ACTTCATTAG-TT------------T------------------------------------------TCT--TTT-CTAACCCTCAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATTGAGAGTCGTTTATCCAATTTTA-TT-TGCCTCTCACTTCTAGGGCTTTTCAAAC--GCT-TTTTTGCAGTG--TTAAGCATTTAAGACATACACTTTGAACCAGTTATCGTATCSizeHit CountTotal NormTotal
No Reads
droTak1
ACG-----GTCTTCGATGACAGGCTTCTTGGGTGCTCAGCTGTGCCCAATGAGAGGTGTCTATATGTGG--ATTATTAAATAATTTGAA-----TTAAT--------------------------------------------------------------------AAAGTCATACGAACAGCAATA-CTAAA---------------TC-TACCCAGTCCCTT------------T------------------------------------------TCT--TTC-CTACCCCACAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATCGAGAATCACTTAACATATTTTTGTT-CATCCGTCACTTCTAGGGCTTTTTAAAT--CCT-TTTTTTAAGTG--TTCAACATTTTAGACATATACTTTGCTCCAGTTATCGTATCSizeHit CountTotal NormTotal
No Reads
droEug1
ACA-----GTTTTCGATGAGAAGCTTCTCCAATGCACAGCTATGACCAGTGAAAGGTGTCTGTACGTGG--ATTATTAAACA-TATGAT-----TTAAT--------------------------------------------------------------------AAAGCTAAAAGCAAAGCAATA-CTAAG-----------------TTAACTATTT------------------------------------------------------------CC---TT-TTTACCCTCAAAATCAATTGTGTAAATGCACAAATGCTCAGTAATTGAGAATCGCTTAATGTATTCCT-TT-CATCCTTCACTTCTAAGGCTTTGTAAGT--CC--T-TTTTAAGTG--TTCAACTTTTTTCACATATACTTGG------TTGCAGTATCSizeHit CountTotal NormTotal
No Reads
dm3
ACG-----ATTTTCGATGATAATCTTCTTCAATGCACCTCTGTTCCCAATGAAAGGTGTCTTTTTATTG--AATTTTAAAAA-AATATA-----TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGCAATA-A-------------------TCTTTTCCATTTC-TG------------T------------------------------------------TCTTTTTG-CTACCCCAAAAAATCAATTGGGTAAATGCACAAATGCTCAATAGCTGGGAATCGCTTAACATATTCCT-CA-CACATTACACTTCTAGGGCTTTCTAAGT--CC--TTTTTTAAGTG--TTTCACTTTTTAGACATATACTTTGCTCCAGTTTTAGTATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGC.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CCTCTGTTCCCAATGAAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droSim2
ACG-----ATCTTCGATGATAAACTTCTTCAATGCACCTCTGTGCCCAATGAAAGGTGTATTTTCATTG--AATTTTAAAAA-TATATA-----TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGCAATA-A-------------------TCTTTCCCATTTC-TC------------T------------------------------------------TCTTTTTG-CTACCCCACAAAATCAATTGGGTAAATGCACAAATGCTCAATAGCTGGGAATCGCTTAACATATTCGT-TA-CTTTTAACACTTCT-GGGCTTTCTTAGT--CC--TTTTT----------TCACATTTTAGACATATACTTCGCTCCACTTTTGGTATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................CCTCTGTGCCCAATGAAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
droSec2
ACG-----ATCTTCGATGATAAACTTCTTCAATGCACCTCTGTGCCCAATGAAAGGTGTCTTTTCATTG--AATTTTAAAAA-AATATA-----TTAAT--------------------------------------------------------------------AAAGCATAAATCACAGCAATA-A-------------------TCTTTCCCATTTC-TC------------T------------------------------------------TCTTTTTG-CTACCCCACAAAATCAATTGGTTAAATGCACAAATGCTCAATAACTGGGAATCGCTTAACATATTCCT-TA-CTTTTTACACTTCTAGGGCTTTCTTAGT--CC--TTTTTTAAGTG--TTTCACATTTTAGATATATACTTCGCTCCACTTTTGGTATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................AATGCACCTCTGTGCCCAATGAAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
...............................................AATGAAAGGTGTCTTTTC................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................TCTTCAATGCACCTCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.....................................CTCTGTGCCCAATGAAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................................................................................................T--------------------------------------------------------------------AAAGCATAAATCACAGCA........................................................................................................................................................................................................................................................................1911.0010010
..............................................CAATGAAAGGTGTCTTTTC................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................ATAAACTTCTTCAATGCACCTCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
droYak3
ACG-----ATCTTCAATGATGAACTTCTTCAATGCACCTCTGCGCCCAATGAAAGGTGTCTTTTCATTG--AATTTTAAAAA-AATGTA-----ATAAT--------------------------------------------------------------------AAAGCATACAGCAGAGCAATA-CCAA----------------TCTTTTTTATTTC-AG------------T------------------------------------------TCTTTTTG-CTACCCCACAAAATCAATTGGGTAAATGCACAAATGCTCAATAACTGAGAATCGCTTAATATATTCCT-TA-CTCCTTACACTACTAGGGCTTTGTAAGT--CC--TTTTTTAAGTG--TTGAATATGTTAGACATAAACTGC-CTCCTGCTTTGGTATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................CAATGCACCTCTGCGCCCAATGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
......................................................................................GTA-----ATAAT--------------------------------------------------------------------AAAGCATACAGCAGAGCAATA-....................................................................................................................................................................................................................................................................2911.00100000010000
.............................CAATGCACCTCTGCGCCCAAT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
...................................ACCTCTGCGCCCAATGAAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
droEre2
ACG-----ATCTTCGATGATGAACTTCTTCAATGCACCTCTACGCCCAATGAAAGGTGTCTTTTCGTAG--AATTTTAAAAAATA--TA-----TTAAT--------------------------------------------------------------------GAAGC-------ACAGCAATG-CCAA----------------TCTGTTTCAATTC-TG------------T------------------------------------------TCTTTCTG-CTACCCCACAAAATCAATTGCGTAAATGCACAAATGCTCAATAACTGAGAACCGCTTAACATATTCCT-TA-CTTTTAACACTACTATGGCTTTAAAAGT--CC--TTTTTTAAGTG--GTTCGCATGTTAGACATATACTT-GCCACAGTTTCGGTATCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................GAACTTCTTCAATGCACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................ATGAACTTCTTCAATGCAC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.......................................CTACGCCCAATGAAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
...........................................GCCCAATGAAAGGTGTCTTTTCGTAG--..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000
dp5
ACC-----TTCTTTGATGACAGGCTGCTGCAATGTACATCAATTCCCACTCAAACCTGCATTTATAAAA--GAGCATAAATAATATGAGTATGTTCAAT--------------------------------------------------------------------AAAGAAT--AACCACGCTTTTAT-----------------------------------GTGAAATTGGTA-------------------------------------------GCT---TT-TTTCCATAAAAAATCAATTGTCTAAGTGCCCAAATGCTCAACCACTTAGGGT--------------------------ACACTTTTAGGGCTTTGGATACTGCCTATTTTTTGAATG--T------------------------------TACTGCTATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..C-----TTCTTTGATGACAGGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
..............................................................................................TCAAT--------------------------------------------------------------------AAAGAAT--AACCACGCTT.......................................................................................................................................................................................................................................................................2211.0010010000000
..........................................................................................ATGTTCAAT--------------------------------------------------------------------AAAGAAT--AACCACG..........................................................................................................................................................................................................................................................................2311.0010010000000
droPer2
ACC-----TTCTTTGATGACAGGCTGCTGCAATGTACATCAATTCCCACTCAAAGTTGCATTTATAAAA--GAGCATAAATAATATGAGTAAATTCAAT--------------------------------------------------------------------AAAGAAT--AACCATGCATTTAT-----------------------------------GTGAAATTGGTA-------------------------------------------GCT--TTT-TTTCCCTAAAAAATCAATTGTCTAAGTGCCCAAATGCTCAACCACTTAGGGT--------------------------ACACTTTTAGGGCTTTGGATACTGCCTATTTTTTGAATG--T------------------------------TACTGCTATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................AAT--------------------------------------------------------------------AAAGAAT--AACCATGCATT......................................................................................................................................................................................................................................................................2111.001001000
.........TCTTTGATGACAGGCTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............TTGATGACAGGCTGCTGCAAT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droWil2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-CTCACTTGCCAAATCAATTGTCTAAATGCACAAATGCGTAAC---TCAG---------------------------TTACACTTTTAAGGCTTTGCAATT--GC--CTGTGTGTGTGTGTGTGTTACCT---------------------GAGGAGTATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ACA-----GTGTTCGATGTAGAGTATCTGCAGTGCACAACCAACGGCAAAGGATCTTGCATTTAAAAAATAAAGCA-------TTAGAA-----ACCACGAATTCAATGCTCAAATCAAAAAGTTCCTTTTTTTGAAAATTGTATTTATATTTGAAGTATCAATAAAAATAAAGAAAGCACATGAATA-TCTAA--------------------------------CAAGGTGTGA-C------------------------------------------TCT---TT-CCCACTTGCGAAATCAATTGCCTAAATGCACAAATGCAAATCCATTTCAG-ACGCTT---------------TAACAGCAACTTTTAGGGCCTCTGAGAG--C---TA--------------------------------------CTCGAAGTGGTATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................A-------TTAGAA-----ACCACGAATTCAATGCT..................................................................................................................................................................................................................................................................................................................................................2414.004001000000000000001000020000000000000000000000000000000000000000
.................................GCACAACCAACGGCAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................1914.004003000000000000000010000000000000000000000000000000000000000000
...........................................................................A-------TTAGAA-----ACCACGAATTCAATG....................................................................................................................................................................................................................................................................................................................................................2213.003003000000000000000000000000000000000000000000000000000000000000
.........................................................................GCA-------TTAGAA-----ACCACGAATTCAAT.....................................................................................................................................................................................................................................................................................................................................................2313.003002000000000000010000000000000000000000000000000000000000000000
...........................................................................A-------TTAGAA-----ACCACGAATTCAAT.....................................................................................................................................................................................................................................................................................................................................................2113.003002000000000001000000000000000000000000000000000000000000000000
............................................................................................................GCTCAAATCAAAAAGTTCCT.................................................................................................................................................................................................................................................................................................................................2013.003002000000000000000000000000000000000000000000000000000000000010
...................................................................................................GAATTCAATGCTCAAATCAAA.........................................................................................................................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
....................................................ATCTTGCATTTAAAAAATAAAGC......................................................................................................................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GTATTTATATTTGAAGTATCAAT.............................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGTTCCTTTTTTTGAAAATTGT..................................................................................................................................................................................................................................................................................................................2212.002001000000000000000000000000000000000000000000000000000000000010
..........GTTCGATGTAGAGTATCTGCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................AGTTCCTTTTTTTGAAAATT....................................................................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
....................GAGTATCTGCAGTGCACAACC........................................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000010000000000000000000000000000000000000000000000
..........................CTGCAGTGCACAACCAACGGCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000020000000000000000000000000000000000000000000
ACA-----GTGTTCGATGTAGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001000000000000000000000000000000000000000000010
........................................................................................................................................AAATTGTATTTATATTTGAAGTATCA...............................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................A-------TTAGAA-----ACCACGAATTCAATGCTCAAA..............................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AAAAGTTCCTTTTTTTGAAA.......................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
ACA-----GTGTTCGATGTAGAGTATCTGCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...............................GTGCACAACCAACGGCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ATTTATATTTGAAGTATCA...............................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................GTAGAGTATCTGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................GTATCTGCAGTGCACAACCAACGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................AACCAACGGCAAAGGATCTTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................GAATA-TCTAA--------------------------------CAAGGTGT.......................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACGAATTCAATGCTCAAATCAAAA........................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................AATTCAATGCTCAAATCAAAAA.......................................................................................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................ATATTTGAAGTATCAATAAAT.........................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................TTGAAGTATCAATAAAAATAAAGAAAGC..............................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................AAAAATAAAGAAAGCACATGA........................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................ACCAACGGCAAAGGATCTTGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AAAGTTCCTTTTTTTGAAAATTGT..................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................CTTGCATTTAAAAAATAAAGCA-------..............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................ATAAAGAAAGCACATGAATA-TCT.................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
............................................GGCAAAGGATCTTGCATT...................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................AAGTTCCTTTTTTTGAAAATTGTATT...............................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................AACCAACGGCAAAGGATCTTGCATTT..................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................ATCTGCAGTGCACAACCAACGGCAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................ATAAAGCA-------TTAGAA-----ACCACGAATT.........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................CAATGCTCAAATCAAAAAGTTCCT.................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................ATAAAAATAAAGAAAGCACATGAAT......................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................AAAAATAAAGCA-------TTAGAA-----ACCACG.............................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........GTTCGATGTAGAGTATCTGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
..............................AGTGCACAACCAACGGCAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............CGATGTAGAGTATCTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................CA-------TTAGAA-----ACCACGAATTCAAT.....................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TTTTTGAAAATTGTATTTAT............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAATAAAGAAAGCACATGA........................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................CACGAATTCAATGCTCAAATCAAAA........................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................AAAAATAAAGAAAGCACATG.........................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTGAAAATTGTATTTATATTT........................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................AA-----ACCACGAATTCAATGCT..................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................AAGTTCCTTTTTTTGAAAATTGTATTTAT............................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................AAATAAAGCA-------TTAGAA-----ACCACGAATTC........................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................AAGCACATGAATA-TCTAA--------------------------------A..............................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
....................GAGTATCTGCAGTGCACAACCAACGGC..................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
....................................................................ATAAAGCA-------TTAGAA-----ACCACGAATTCAAT.....................................................................................................................................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
....................................CAACCAACGGCAAAGGATCTTGCATT...................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............GATGTAGAGTATCTGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GA-C------------------------------------------TCT---TT-CCCACTTGCGA.....................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ATTGTATTTATATTTGAAGT...................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................AGTTCCTTTTTTTGAAAATTGTATTT..............................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................ATAAAGCA-------TTAGAA-----ACCACGA............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
....................................................ATCTTGCATTTAAAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................AACCAACGGCAAAGGATCTT........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..............................AGTGCACAACCAACGGCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
............................GCAGTGCACAACCAACGGCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
........................................................TGCATTTAAAAAATAAAGC......................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TGCTCAAATCAAAAAGTTCCT.................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................ATCTGCAGTGCACAACCAACGGC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATAAAAATAAAGAAAGCACAT..........................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................GCTCAAATCAAAAAGTTCC..................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................AAGCA-------TTAGAA-----ACCACGAATTCAAT.....................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................GCTCAAATCAAAAAGTTCCTT................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................GAGTATCTGCAGTGCACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................GCTCAAATCAAAAAGTTCCTTTT..............................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ATTGTATTTATATTTGAAGTATC................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
..............................................CAAAGGATCTTGCATTTAA................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................AAAGAAAGCACATGAATA-TCT.................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................CAACCAACGGCAAAGGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................CTTGCATTTAAAAAATAAAGC......................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................CTTGCATTTAAAAAATAAA........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................CCACGAATTCAATGCTCAA...............................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................AAAGAAAGCACATGAATA-T...................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................ATAAAGAAAGCACATGAATA-TCTAA--------------------------------A..............................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................GCTCAAATCAAAAAGTTCCTTTTT.............................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AAAAAGTTCCTTTTTTTGAAAATTGT..................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................GCACAACCAACGGCAAAGGATCTTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................GAGTATCTGCAGTGCACAACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................TTCAATGCTCAAATCAAAA........................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................CAATGCTCAAATCAAAAAGTTC...................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................CAACGGCAAAGGATCTTGC......................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................ATATTTGAAGTATCAATAA...........................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................A-----ACCACGAATTCAATGCTC.................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TTGTATTTATATTTGAAGTATCA...............................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................AACCAACGGCAAAGGATCTTGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................GCAGTGCACAACCAACGGC..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
......................................ACCAACGGCAAAGGATCTTGCATTT..................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................CTGCAGTGCACAACCAACGG...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................GTGCACAACCAACGGCAAAGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................CAAATCAAAAAGTTCCTTTTTTT...........................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
...................................................GATCTTGCATTTAAAAAATAAAGC......................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................A-------TTAGAA-----ACCACGAATTCAATGCTC.................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................A-------TTAGAA-----ACCACGAATTCA.......................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................ATAAAGAAAGCACATGAAA......................................................................................................................................................................................................................................................................1930.672000000000000001100000000000000000000000000000000000000000000000
droMoj3
ACG-----CTGTTCGACGTTGAGTCTCTGCAGTGCAAAGCCAACCAAAATGCGAACTGTATATTTGAAG--AGTATTGAATACAAACT-------------ATTCCATACCTAAG-TATCGAGCTCCTTTTTATAAACAC----------TTCAAAGCAATCATAAATACAGAGAATGCTCATGTATA-ATGC--------------------------------ATGACGTGGGTC---------------------------GCTTACATTTCTGG--T----TTC-CCCACTTTCAGAATCAATTGTCTAAATGCACAAATGCAAATCCATTTCAG-TCGCTT---------------TAACGGCCACTTTTAGGGCCTCTGAGAC--TG---G--------------------------------------GTGGGGCGGGTATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAATAGAAATCTTTGAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGCTATT-TTCA----------------TTTTGTTCAGT----G------------T------------------------------------------TTTGACCCCCACTCTTATAGAATTAATTGACTAAATGCACAAATGCAAATCCATTTGAG-ACATTTACCAA---------------AGCACTTTAAAGGCCTCTGAGAG--ATT-TT--------------------------------------CTCGAACAGGTATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:58 AM