ID:

dan_2603

 Coordinate:

scaffold_13337:12777789-12777939 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.8

Flybase annnotation

exon [dana_GLEANR_8752:2]; CDS [Dana\GF23992-cds]; intron [Dana\GF23992-in]

Repeatable elements

NameClassFamilyStrand
CT-richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTTGGGAATAAAAACAATGCTGGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCCAAGAAGAAGAAGAACACGACGAACAAGAGAATTCAAAAAAAAAAAAAAGAGAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCTGCCTGCCTGCCTGCTTGCCTCGTTGCTTTTCTTCGTCTCTGTCTTGGCCTGTGTTTCTTTGTGTCGCAATTTGCGAAATTTTCCATGCGCCCCCCAAGTCCCTGTCT
****************************************************************************************************.............(((.((.(((...............))).)).))).****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V055
head
 V039
embryo
 V106
head
..................TGCTGGCAAAATTGTGGGCGC.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................AAGAAGAGAAGCTGCTGCCTG...................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......AATAAAAACAATGCTGGCAAAA.............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................AAAAAAAAGAGAGGGGGAGGAGC................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................AAAGAAAAGAGAGGGGGAGG................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................AAAAAAGAGAGGGGGAGGAGC................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
............................ATTGTGGGCGCAAATGGACAT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................................................TTCTTCGTGTCTGTCTTGGCC.......................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................CTTCGTCTCTGTCTTGGCCTG........................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................TGTCTTGGCCTGTGTTTCTTTG.............................................. 22 0 1 1.00 1 1 0 0 0 0 0
............AAACAATGCTGGCAAAATTGTGGGC...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................AAAAAACAAAAGAGAGAGGGGGA..................................................................................................................................... 23 2 2 0.50 1 0 1 0 0 0 0
..........................................................................................................AAGAGAGGGGGAGGCGC................................................................................................................................ 17 1 2 0.50 1 0 0 0 1 0 0
............................................................AAGACGAAGAACAACACAACGA......................................................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0
......................................................................................................................................................................................CTGTCATGGCCTGTCTCTCTTTG.............................................. 23 3 2 0.50 1 0 0 0 1 0 0
.................................................................................................AAAAAAAAAAGGAGAGGGGGA..................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0
...........................................................AAATAAGAACAAGAACACGACGA......................................................................................................................................................................... 23 3 3 0.33 1 0 1 0 0 0 0
...............................................................................................ACAAATAAAAAAAGAGAGGGGGA..................................................................................................................................... 23 2 3 0.33 1 1 0 0 0 0 0
.....................................................AGTAGCGAAGATGAAGAAG................................................................................................................................................................................... 19 2 10 0.30 3 0 0 3 0 0 0
................................................................GGAAGAAGAACACCACGAAC....................................................................................................................................................................... 20 2 4 0.25 1 0 1 0 0 0 0
.....................................................AGTAGCGAAGATGAAGAAGA.................................................................................................................................................................................. 20 2 9 0.22 2 1 0 0 0 1 0
.....................................................................................................AAAAAAAGTGAAGGGGAGGA.................................................................................................................................. 20 2 5 0.20 1 0 1 0 0 0 0
...............................GTGGGCGCGAATGGACGT.......................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0
...............................................................................................AAAAAAAAAAAAAGCGAGGGG....................................................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0
.....................................GCAACTGGACGTGGTAAG.................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 1 0 0
....................................................AAGTAGCGAAGATGAAGAA.................................................................................................................................................................................... 19 2 9 0.11 1 1 0 0 0 0 0
..........................................................CAAAGAAGAACAAGAACAC.............................................................................................................................................................................. 19 2 12 0.08 1 0 1 0 0 0 0
..................................................................................................AAAAAAAAAAGAGAGGGTGACCA.................................................................................................................................. 23 3 12 0.08 1 0 0 0 0 1 0
............................................................AAGGAAAAGAAGAACACGA............................................................................................................................................................................ 19 2 13 0.08 1 0 0 0 0 1 0
..................................................................................................AAAAAAAAAAGAGAGGAGGA..................................................................................................................................... 20 1 13 0.08 1 0 1 0 0 0 0
.....................................................AGTAGCGAAGATGAAGAA.................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 1 0 0
...................................................................................CAAGAGAACCCAAAAAAAAAAAA................................................................................................................................................. 23 2 14 0.07 1 0 1 0 0 0 0
..............................................................GACGAAGAAGAACACCCCGA......................................................................................................................................................................... 20 3 15 0.07 1 0 1 0 0 0 0
........................................................................AACACCTCAAACAAGAGAAT............................................................................................................................................................... 20 3 18 0.06 1 0 0 0 0 1 0
.................................................................................AACAAGAGATTTCAGAAAA....................................................................................................................................................... 19 2 18 0.06 1 0 0 1 0 0 0
..........................................................................................ATTCAAAAGAGAAAAAAAGA............................................................................................................................................. 20 2 20 0.05 1 0 0 0 0 0 1
...........................................................................................................................................................................................AGGGCCGGTGTTTCTTTGT............................................. 19 3 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................ACATGAAGAAGGGCTGCTGC............................................................................................................ 20 3 20 0.05 1 0 1 0 0 0 0
...........................................................CAACAAGAAGTAGAACACGG............................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0
..............................................................................................AAAAAAAAAAAAAAGAGA........................................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0
........................................................AGACAAAAAGACGAAGAACAC.............................................................................................................................................................................. 21 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GAAACCCTTATTTTTGTTACGACCGTTTTAACACCCGCGTTTACCTGTACCATTCATCGGTTCTTCTTCTTCTTGTGCTGCTTGTTCTCTTAAGTTTTTTTTTTTTTTCTCTCCCCCTCCTCGTGTACTTCTTCTCTTCGACGACGGACGGACGGACGAACGGAGCAACGAAAAGAAGCAGAGACAGAACCGGACACAAAGAAACACAGCGTTAAACGCTTTAAAAGGTACGCGGGGGGTTCAGGGACAGA
******************************************************************************************************.............(((.((.(((...............))).)).))).**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V055
head
 V106
head
 V105
male body		 V039
embryo
................................................................................................................CCCCCTCCTCGTGTACTTCTTCT.................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................................................CCGGACACAAAGAAACACAGC......................................... 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................ACAAAGAAACACAGCGTTAAA................................... 21 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................AGGTACTCGGGGGGATCCGG...... 20 3 2 0.50 1 0 0 0 0 1 0
.........................................................................................................................................................................................AGAACCAGACTCAAAGAAA............................................... 19 2 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................AGGTACGAGGGGGGTCAAGGG..... 21 3 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................CGACGGACGGACGGGTGAA........................................................................................... 19 2 6 0.33 2 0 2 0 0 0 0
...................................................................................................................................................ACGTACGGACGAACGGGGC..................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0
...............................................TACCCTTCATCCGTTCTTC......................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 1
...............................................................................................................................................................................................................................AGAGGTACGCGGGGGGTA.......... 18 2 7 0.14 1 0 0 1 0 0 0
............................................................................................................................................................................................................................TTAAGGGGTACGCGGGGGTT........... 20 3 8 0.13 1 0 0 1 0 0 0
..............................................................................TGCTTTTTCTCTCAAGTTCTT........................................................................................................................................................ 21 3 8 0.13 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................GTGGGGGGTTCAGGGACG.. 18 2 10 0.10 1 0 0 1 0 0 0
..................................................................................................................................................................................................CACCAAGGACCACAGCGTTA..................................... 20 3 15 0.07 1 1 0 0 0 0 0
..........................................................................................................................................................................................GAAACGGACACAAAGATA............................................... 18 2 15 0.07 1 1 0 0 0 0 0
............................................................................................................................................................................................................................ACAAAAGGTACGCGGGGGGA........... 20 3 16 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................ACAAAAAGAAGCAAAGACAGT............................................................... 21 3 20 0.05 1 0 0 0 0 0 1
.....................................................................................................................................................................................................AAAAAAACACAGCGCTAA.................................... 18 2 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................................................................AGAGACAGCACACGACACAA.................................................... 20 3 20 0.05 1 0 0 0 0 0 1
...............................................................................................................................................................................................................................AGAGGTACTCGGGGGGGTC......... 19 3 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................AGAGGTACGCGCGGGG............ 16 2 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:12777739-12777989 - dan_2603 CTT-TGGGAATAAAAACAATGCT---GGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCC-----------------AAGAAGAAGAAGA--ACACG--------ACGAA-----CAAGAGAATTCAAAAAAAAAAAAA-------AGA-----------GAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCTGCCTGCCTGCCTGCTTGCCTCGTTGCTTTTCTTCGTCTCTGTCTTGGCCTG---------TGTTT---CTTTGTGTCGCAA--------T-------TTGCGAAATT-TTCCATGCGCCCCCC----AAG--T--CCCTGTC------------------T
droBip1 scf7180000396589:1245298-1245547 + CTT-CCCGAATAAAAACAACGCT---GGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCGAT-----GTGTT---GGAAGAAGAAGAAGA---------------------------AGAGAATACAAAAAAAAAA----------AGAGAGGAGAGTGGGAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCCTC-----------------GCGTTGCTTTTCTTCGTCTCTGTCTTTGCCTG---------TGTTT---CTTTGTGTCGCAA--------T-------TTGCGAAATT-TTCCATGCGCCCTGTTCCCCGA----CA--------TG--ATGCCCGTG-GAC
droKik1 scf7180000302686:60896-61105 + CCC-CA---ACAAAAACAATGCT---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTATTC-----------------AAGAAGAAGAGAAGGAGAAG--------AGACA---GAAA----------------------AGGAGAA------------------GAA-GTAGGAACTGCA-GAGAGAGGTTGCTGT------A---G--C-AAAAGTTAATTTTCTTCGCCTCCGTCTTGTTGTG---------TGTTTCTTCTTTGTGTCGCAA--------TGCTGTATTCGCAAAATT-TTACATGTGCC------------------------------------------
droFic1 scf7180000453929:1853417-1853597 - TTT-TGGTGGCAAAAACAACGCA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------A------------------------TAAAA--AA--------------------------------------------------------------AAA--------------ACGAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------T-------TTGCGCAATTTTTCCATGTGCTATAA----ATG--T--ATATATA------------------A
droEle1 scf7180000491268:1255216-1255397 + TTT-TGGTGGTAAAAACAACACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------C------------------------TAAAAAAAA--------------------------------------------------------------AAA--------------ATCAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------T-------TTGCGCAATC-TTCCATGTGCTATAC----ATA--T--CTATGTA------------------T
droRho1 scf7180000768851:41446-41622 + TTT-TGGTGGCAAAAACAACACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------C------A-----------A---A-------AAA--------------------------------------------------------------AAA--------------ACCAAGAGTTGC-TG-------------C-AGAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTC-TCTTTGTATGGCAA--------T-------TTGCGCAATC-TTCCATGTGCTATAC----ATA--T--TTATGTA------------------T
droBia1 scf7180000302193:3265694-3265906 + CTT-CGGTGGCAAAAGCAACACG---GGCAAAGTTGTGGGCGCAAACGGACATGGTGAGTAGAG--------C------A-----------G---GCG-------AGAAA-----------------------------------CGC--------------------ACA--------------CCGAAGAGTTGCCTG---C--AAGCG--C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAG--------T------TTTGCGCAATT-TTCCATGTGCCACATCC--ATC--T--CTATGTACACGCTGTGCCCCTGTGCC
droTak1 scf7180000415868:467116-467314 + TTT-TGGTGGCAAAAACCACACG---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--TGAGTGGGGTAAAA-----------------ATAAAACGA------------------------------------------TA-------------------AAA--------------CCGAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------T------TTTGCGCAATT-TTCCATGTGCTATATCT--ATA--C--ATATGTA------------------T
droEug1 scf7180000409466:3532824-3533007 + CTT-TGGTGGAAAAAACAACACA---GGCAAAGTTGTGGGCGCAAATGGGCATGGTGAGTAAAG--------CAT----A-----------A---A-------AAA--------------------------------------------------------------GAA--------------ACGAAAAGTTGCCTG-------------T-AAAAGTGGCTTTTCTTCGTCTCCACCTTCGTCTG---------TGTTT-TTCTTTGTGTGGCAA--------T-------TTGCGCAATT-TTCCATGTGCTATATCTATA----TATA--TG----AG--AT----------G
dm3 chr3L:5762984-5763174 + CTT-TAGTGGCAAAAACAATACA---GGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACAC-T-----GTGTAAAG-----------------ATACAACAA--------A------------------------------ATGTA-------------------AAA--------------TCCAAAAGTTGCTTG-------------C-AAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------TT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCA--------------------------------T
droSim2 3l:5676017-5676218 + dsi_9043 CTT-TAGTGGCAAAAACAATACA---GGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACAC-T-----GAGTAAAG-------------AT--ATACAACAA--------A-------------------------------TATA-------------------AAA--------------TCCAAAAGTTGCTTG-------------C-AAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------TT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCATA--T--ATATATA------------------T
droSec2 scaffold_2:5699850-5700041 + CTT-TAGTGGCAAAAACAATACA---GGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACAC-T-----GAGTAAAG-----------------ATACAACAA--------A-------------------------------TTTA-------------------AAA--------------TCCAAAAGTTGCTTT-------------C-AAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAC--------TT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCG------------TA------------------T
droYak3 3L:6332465-6332655 + CTT-TGGTGGCAAAAACAATACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------CGTAAAG-----------------ATACAGCAA--------A------------------------------ATATAA------------------AAA--------------TCCAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTTTCCGTCTGCGTCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA-------CTT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCA---------------------------------
droEre2 scaffold_4784:8453577-8453782 + CTT-TGGTGGCAAAAACAATACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------AGTAAAG-----------------CTACAACAA--------A------------------------------GTATAA------------------AAA--------------TCCAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------TTTT---TTTGCGCAATT-TTCCATGTGCTATATCTTCTTATATACATGTGT-------------------A
dp5 XR_group6:9790423-9790606 - CTT-TGGCAAC---------------AGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGCG--------T------A-----------G---GAGACG--------ACGAA--------------------------------------------------GAGGGGG--------------AAGAGAAGTTGCCCC------AATCGCTT-AGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCTCTCTCTTATGT---TTCTTTGTGTCGCAA--------T-------TTGAAAAATT-TTCCATGTGC-GTCTCTTGG--------------------------------T
droPer2 scaffold_61:65992-66173 - CTT-TGGCAAC---------------AGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGCG--------T------A-----------G---GAGACG--------ACGAA--------------------------------------------------GAGGGGG--------------AAGAGAAGTTGCCCC------AATCGCTT-AGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCT--CTCTTATGT---TTCTTTGTGTCGCAA--------T-------TTGAAAAATT-TTCCATGTGC-GTCTCTTGG--------------------------------T
droWil2 scf2_1100000004511:3791828-3791935 + ATAATGGTAACAGCAACAGCGCCGGCAGCAAAATTTTGGGCGCAAATGGTCACGGTGAGTAGAA--------A------A-----------A---AG--------AGAGACGCAATACGCA----------------------AGTAGAAAA----------------AAA--------------ACAAAAAG-------------------------------------------------------------------------------------------------------------------------------------------------AA------------------A
droVir3 scaffold_13049:8312859-8312910 + T--------GCAATTACAAAACAAATGGCAAGGCTGTGGGCTCCAATGGACATGGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:11966769-11966812 + TGC-TAG------------CACT---GGCAAAGCACTTAGCTCGAACGGGCATGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:7341355-7341521 + CGG-CAGCAACAAAACAAA---T---GGCAAATTTGGTGCCGGAAATGGACACGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------GCTTG-------------------ATGGTTA-TCGTCATCGACCTATCGGTTTATCGCGCCTATTTCCTTTTTTGATTTGGCATTACATAAATT-----TGTGTGCACTT-CTG--T---------TTACA----TTTG------CGTG--TTGTCAATG-TAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTT-TGGGAATAAAAACAATGCT---GGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCC-----------------AAGAAGAAGAAGA--ACACG--------ACGAA-----CAAGAGAATTCAAAAAAAAAAAAA-------AGA-----------GAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCTGCCTGCCTGCCTGCTTGCCTCGTTGCTTTTCTTCGTCTCTGTCTTGGCCTG---------TGTTT---CTTTGTGTCGCAA--------T-------TTGCGAAATT-TTCCATGCGCCCCCC----AAG--T--CCCTGTC------------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................TGCT---GGCAAAATTGTGGGCGC............................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................AAGAAGAGAAGCTGCTGCCTG............................................................................................................................................................2111.001100000
........AATAAAAACAATGCT---GGCAAAA......................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................AAAAAAA-------AGA-----------GAGGGGGAGGAGC......................................................................................................................................................................................2311.001010000
..........................................................................................................................................AAAAA-------AGA-----------GAGGGGGAGGAGC......................................................................................................................................................................................2111.001000010
................................ATTGTGGGCGCAAATGGACAT..................................................................................................................................................................................................................................................................................................................2111.001000010
....................................................................................................................................................................................................................................CTTCGTCTCTGTCTTGGCCTG---------.....................................................................................................2111.001100000
.............................................................................................................................................................................................................................................TGTCTTGGCCTG---------TGTTT---CTTTG........................................................................................2211.001100000
.............AAACAATGCT---GGCAAAATTGTGGGC..............................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................AAAAAAAAAAAAA-------AGA-----------GA.................................................................................................................................................................................................18200.051000100
droBip1
CTT-CCCGAATAAAAACAACGCT---GGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCGAT-----GTGTT---GGAAGAAGAAGAAGA---------------------------AGAGAATACAAAAAAAAAA----------AGAGAGGAGAGTGGGAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCCTC-----------------GCGTTGCTTTTCTTCGTCTCTGTCTTTGCCTG---------TGTTT---CTTTGTGTCGCAA--------T-------TTGCGAAATT-TTCCATGCGCCCTGTTCCCCGA----CA--------TG--ATGCCCGTG-GACSizeHit CountTotal NormTotal
No Reads
droKik1
CCC-CA---ACAAAAACAATGCT---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTATTC-----------------AAGAAGAAGAGAAGGAGAAG--------AGACA---GAAA----------------------AGGAGAA------------------GAA-GTAGGAACTGCA-GAGAGAGGTTGCTGT------A---G--C-AAAAGTTAATTTTCTTCGCCTCCGTCTTGTTGTG---------TGTTTCTTCTTTGTGTCGCAA--------TGCTGTATTCGCAAAATT-TTACATGTGCC------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTT-TGGTGGCAAAAACAACGCA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------A------------------------TAAAA--AA--------------------------------------------------------------AAA--------------ACGAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------T-------TTGCGCAATTTTTCCATGTGCTATAA----ATG--T--ATATATA------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
TTT-TGGTGGTAAAAACAACACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------C------------------------TAAAAAAAA--------------------------------------------------------------AAA--------------ATCAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------T-------TTGCGCAATC-TTCCATGTGCTATAC----ATA--T--CTATGTA------------------TSizeHit CountTotal NormTotal
No Reads
droRho1
TTT-TGGTGGCAAAAACAACACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------C------A-----------A---A-------AAA--------------------------------------------------------------AAA--------------ACCAAGAGTTGC-TG-------------C-AGAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTC-TCTTTGTATGGCAA--------T-------TTGCGCAATC-TTCCATGTGCTATAC----ATA--T--TTATGTA------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
CTT-CGGTGGCAAAAGCAACACG---GGCAAAGTTGTGGGCGCAAACGGACATGGTGAGTAGAG--------C------A-----------G---GCG-------AGAAA-----------------------------------CGC--------------------ACA--------------CCGAAGAGTTGCCTG---C--AAGCG--C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAG--------T------TTTGCGCAATT-TTCCATGTGCCACATCC--ATC--T--CTATGTACACGCTGTGCCCCTGTGCCSizeHit CountTotal NormTotal
No Reads
droTak1
TTT-TGGTGGCAAAAACCACACG---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--TGAGTGGGGTAAAA-----------------ATAAAACGA------------------------------------------TA-------------------AAA--------------CCGAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------T------TTTGCGCAATT-TTCCATGTGCTATATCT--ATA--C--ATATGTA------------------TSizeHit CountTotal NormTotal
No Reads
droEug1
CTT-TGGTGGAAAAAACAACACA---GGCAAAGTTGTGGGCGCAAATGGGCATGGTGAGTAAAG--------CAT----A-----------A---A-------AAA--------------------------------------------------------------GAA--------------ACGAAAAGTTGCCTG-------------T-AAAAGTGGCTTTTCTTCGTCTCCACCTTCGTCTG---------TGTTT-TTCTTTGTGTGGCAA--------T-------TTGCGCAATT-TTCCATGTGCTATATCTATA----TATA--TG----AG--AT----------GSizeHit CountTotal NormTotal
No Reads
dm3
CTT-TAGTGGCAAAAACAATACA---GGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACAC-T-----GTGTAAAG-----------------ATACAACAA--------A------------------------------ATGTA-------------------AAA--------------TCCAAAAGTTGCTTG-------------C-AAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------TT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCA--------------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................TG---------TGTTTCTTCTTTGTGTGGC..................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000010
....................................TGGGCGCAAATGGACATGGTG..............................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000
.................................TTGTGGGCGCAAATGGACATG.................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000010
......................................GGCGCAAATGGACATGGTGAG............................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTTGTGGGCGCAAATGGACA...................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000010000
..........................GGCAAACTTGTGGGCGCA...........................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................TT-----TTTGCGCAATT-TTCCATGT.............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CTG---------TGTTTCTTCTTTGTGTGG...................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................A---GGCAAACTTGTGGGCGCAAATGGAC....................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACA---GGCAAACTTGTGGGCGCA...........................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..........................GGCAAACTTGTGGGCGCAAATGGACA...................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................A---GGCAAACTTGTGGGCGC............................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........GGCAAAAACAATACA---GGCA.........................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CCGTCTGCGCCTTCGTCTG---------TG...................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................G---------TGTTTCTTCTTTGTGTGGCA.................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................T-TTTCCGTCTGCGCCTTCG..................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTGGGCGCAAATGGACATG.................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
..................ATACA---GGCAAACTTGTGGGCGCA...........................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCAAACTTGTGGGCGCAAATGGACA...................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................CCTTCGTCTG---------TGTTTCTTCTT..........................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CAAATGGACATGGTGAGTACA........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CGTCTGCGCCTTCGTCTG---------TGT..................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000
..................................TGTGGGCGCAAATGGACATG.................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000
..................ATACA---GGCAAACTTGTGGGCG.............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................CCGTCTGCGCCTTCGTCTG---------TGG..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATGGACATGGTGAGTACAC-T-----G...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AAACTTGTGGGCGCAAATGGAC....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AAAAGTTGCTTG-------------C-AAAAGTGG........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................CAAACTTGTGGGCGCAAATGG......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................TTTCTTCTTTGTGTGGCAA--------TT-----T................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................TACA---GGCAAACTTGTGGGCGCAAATG.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TCCGTCTGCGCCTTCGTCT...............................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................TCTG---------TGTTTCTTCTTTGTGTG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................AAACTTGTGGGCGCAAATGGA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......TGGCAAAAACAATACA---GGCAA........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTTGTGGGCGCAAATGGACATGAC...............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CA---GGCAAACTTGTGGGCGCAAATGGACA...................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCTTTGTGTGGCAA--------TT-----TTTGC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................GTGAGTACAC-T-----GTGTAAAG-----------------AT.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................TACA---GGCAAACTTGTGGGCGC............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................A---GGCAAACTTGTGGGCGCAAAT........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTGCTTG-------------C-AAAAGTGGCTT-TT..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................ATGGTGAGTACAC-T-----GTGTAAA.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................GTCTGCGCCTTCGTCTG---------TGTT.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................A---GGCAAACTTGTGGGCGCAAATGG......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AACTTGTGGGCGCAAATGGACA...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ACATGGTGAGTACAC-T-----GTGTA...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACA---GGCAAACTTGTGGGCGC............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................ACTTGTGGGCGCAAATGGA.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAGTGGCTT-TTTCCGTCTGCG........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................CGCAAATGGACATGGTGAGTACAC-T-----G...............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CTTCGTCTG---------TGTTTCTTCTTT.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................TGGGCGCAAATGGACATGGT...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................CTTGTGGGCGCAAATGGACAT..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AAAGTTGCTTG-------------C-AAAAGTGGC.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................A--------------TCCAAAAGTTGCTTG-------------C-AAAA............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................G---------TGTTTCTTCTTTGTGTGGC..................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AAACTTGTGGGCGCAAATG.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTTGTGTGGCAA--------TT-----TTTGCG...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................GGACATGGTGAGTACAC-T-----GT..............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................GTGGCTT-TTTCCGTCTGCGCC......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................TTTCTTCTTTGTGTGGCAA--------TT-----.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................GCAAATGGACATGGTGAGTAC.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................GTGGGCGCAAATGGACATC.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................ACTTGTGGGCGCAAATGGACATG.................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................AATACA---GGCAAACTTGTGGGCGCAAATG.......................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTGGGCGCAAATGGACATGAC...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................G-------------C-AAAAGTGGCTT-TTTCCGTC............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................CCTTCGTCTG---------TGTTTCTTCTTT.........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TTGTGTGGCAA--------TT-----TTTGCGCA.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AATACA---GGCAAACTTGTGGGCGC............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TAGTGGCAAAAACAATACA---GGC..........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................TGAGTACAC-T-----GTGTAAAG-----------------AT.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTGGGCGCAAATGGACATGGTGA.............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................A---GGCAAACTTGTGGGCGCAA..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TAGTGGCAAAAACAATACA---GG...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
droSim2
CTT-TAGTGGCAAAAACAATACA---GGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACAC-T-----GAGTAAAG-------------AT--ATACAACAA--------A-------------------------------TATA-------------------AAA--------------TCCAAAAGTTGCTTG-------------C-AAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------TT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCATA--T--ATATATA------------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................CCGTCTGCGCCTTCGTCTG---------TG...................................................................................................2111.00100000001000000000
...........................................................................................................................................................................................................................GTGGCTT-TTTCCGTCTGCGCC......................................................................................................................2111.00100010000000000000
..................................................................................................................................................ATA-------------------AAA--------------TCCAAAAGTTGCTTG-------------..................................................................................................................................................2111.00110000000000000000
......................................................................................................................................................................................................TG-------------C-AAAAGTGGCTT-TTTCCGTT............................................................................................................................2211.00100010000000000000
.................................................ACATGGTGAGTACAC-T-----GAGTA...........................................................................................................................................................................................................................................................................................2111.00100000100000000000
.................................................................................................................................................................................................TTGCTTG-------------C-AAAAGTGGCA......................................................................................................................................1811.00100000000010000000
.............................................ATGGACATGGTGAGTACAC-T-----G...............................................................................................................................................................................................................................................................................................2111.00110000000000000000
....................................................................................................................................................................................................................................TTCCGTCTGCGCCTTCGTCTG---------.....................................................................................................2111.00110000000000000000
...........................GCAAACTTGTGGGCGCAAATGGAC....................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
....................................................................................................................................................................................................................................................GTCTG---------TGTTTCTTCTTTGTG......................................................................................2011.00100000000001000000
....................ACA---GGCAAACTTGTGGGCGC............................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.............................AAACTTGTGGGCGCAAATGGAC....................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
...................................................................................................................................................................................................................................................CGTCTG---------TGTTTCTTCTTTGTG......................................................................................2111.00100000010000000000
....................ACA---GGCAAACTTGTGGGCGCAT..........................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
droSec2
CTT-TAGTGGCAAAAACAATACA---GGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACAC-T-----GAGTAAAG-----------------ATACAACAA--------A-------------------------------TTTA-------------------AAA--------------TCCAAAAGTTGCTTT-------------C-AAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAC--------TT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCG------------TA------------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................TTT-------------C-AAAAGTGGCTT-TTTCCG..............................................................................................................................2111.0011000
................................CTTGTGGGCGCAAATGGACAT..................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................................................................................................................................................TCTTTGTGTGGCAC--------TT-----TTTGC............................................................2111.0010001
droYak3
CTT-TGGTGGCAAAAACAATACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------CGTAAAG-----------------ATACAGCAA--------A------------------------------ATATAA------------------AAA--------------TCCAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTTTCCGTCTGCGTCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA-------CTT-----TTTGCGCAATT-TTCCATGTGCTATATCTTCA---------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................CAAAGTTGTGGGCGCAAATGG......................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................................................................................................................................................................................................GGCTTTTTTCCGTCTGCGTCT.....................................................................................................................2111.00101000000000
....TGGTGGCAAAAACAATACA---GG...........................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
CTT-TGGTGGCAAAAACAATACA---GGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAAG--------AGTAAAG-----------------CTACAACAA--------A------------------------------GTATAA------------------AAA--------------TCCAAAAGTTGCCTG-------------C-AAAAGTGGCTTTTTTCCGTCTGCGCCTTCGTCTG---------TGTTTCTTCTTTGTGTGGCAA--------TTTT---TTTGCGCAATT-TTCCATGTGCTATATCTTCTTATATACATGTGT-------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................TGGCTTTTTTCCGTCTGCGC.......................................................................................................................2011.0011000000
.............................................ATGGACATGGTGAGTAAAG--------AG.............................................................................................................................................................................................................................................................................................2111.0010000100
................................................................................................................................................................................................................................................CTTCGTCTG---------TGTTTCTTCTTTGTGT.....................................................................................2511.0010000010
.............................AAAGTTGTGGGCGCAAATGGA.....................................................................................................................................................................................................................................................................................................................2111.0010000010
..................ATACA---GGCAAAGTTGTGGGCGCAAAT........................................................................................................................................................................................................................................................................................................................2611.0010000100
...................................GTGGGCGCAAATGGACATGGT...............................................................................................................................................................................................................................................................................................................2111.0010000100
dp5
CTT-TGGCAAC---------------AGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGCG--------T------A-----------G---GAGACG--------ACGAA--------------------------------------------------GAGGGGG--------------AAGAGAAGTTGCCCC------AATCGCTT-AGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCTCTCTCTTATGT---TTCTTTGTGTCGCAA--------T-------TTGAAAAATT-TTCCATGTGC-GTCTCTTGG--------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................TGGTTTTCTCCGTATCCGTG......................................................................................................................2012.0020200000000
...............................................................................................................................................................................................................................................................................................................TT-TTCCATGTGC-GTCTCTTGG--------------------------------.2111.0010100000000
..T-TGGCAAC---------------AGCAAAGTTGTGG................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................GAGCAAATGGACACGGTGAGT...........................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................A-----------G---GAGACG--------ACGAA--------------------------------------------------GAGGGGG--------------..............................................................................................................................................................................2011.0010100000000
...................................GTGGGAGCAAATGGACACGG................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................TGGGAGCAAATGGACACGGTGT.............................................................................................................................................................................................................................................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................ATGT---TTCTTTGTGTCGCAA--------T-------T...............................................................2111.0010100000000
..................................................CACGGTGAGTAGCG--------T------A-----------G---GAGA....................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................GGTTTTCTCCGTATCCGTGTC....................................................................................................................2111.0010100000000
................................................................................................AGACG--------ACGAA--------------------------------------------------GAGGGGG--------------AAGA..........................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................CTT-AGTAGTTGGTTTTCTCCG..............................................................................................................................2111.0010100000000
......GCAAC---------------AGCAAAGTTGTGGGA..............................................................................................................................................................................................................................................................................................................................2011.0010000001000
.TT-TGGCAAC---------------AGCAAAGTTGTG.................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................TTTGTGTCGCAA--------T-------TTGAAAA.........................................................2011.0010100000000
droPer2
CTT-TGGCAAC---------------AGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGCG--------T------A-----------G---GAGACG--------ACGAA--------------------------------------------------GAGGGGG--------------AAGAGAAGTTGCCCC------AATCGCTT-AGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCT--CTCTTATGT---TTCTTTGTGTCGCAA--------T-------TTGAAAAATT-TTCCATGTGC-GTCTCTTGG--------------------------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........AC---------------AGCAAAGTTGTGGGAGC............................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
ATAATGGTAACAGCAACAGCGCCGGCAGCAAAATTTTGGGCGCAAATGGTCACGGTGAGTAGAA--------A------A-----------A---AG--------AGAGACGCAATACGCA----------------------AGTAGAAAA----------------AAA--------------ACAAAAAG-------------------------------------------------------------------------------------------------------------------------------------------------AA------------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.TAATGGTAACAGCAACAGCGC.................................................................................................................................................................................................................................................................................................................................................2111.00100001
..........................AGCAAAATTTTGGGCGCAAATG.......................................................................................................................................................................................................................................................................................................................2211.00100100
........AACAGCAACAGCGCCGGCAG...........................................................................................................................................................................................................................................................................................................................................2011.00100010
......................CGGCAGCAAAATTTTGGGCGC............................................................................................................................................................................................................................................................................................................................2111.00101000
........AACAGCAACAGCGCCGGC.............................................................................................................................................................................................................................................................................................................................................1821.00201010
ATAATGGTAACAGCAACA.....................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................................AAATGGTCACGGTGAGTAGAA--------...............................................................................................................................................................................................................................................................................................2111.00100010
.........................................................AGTAGAA--------A------A-----------A---AG--------AGAGACGCA.....................................................................................................................................................................................................................................................2111.00101000
...........AGCAACAGCGCCGGCAGCA.........................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
T--------GCAATTACAAAACAAATGGCAAGGCTGTGGGCTCCAATGGACATGGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................AAATGGCAAGGCTGTGGGCTCCA..........................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
TGC-TAG------------CACT---GGCAAAGCACTTAGCTCGAACGGGCATGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CGG-CAGCAACAAAACAAA---T---GGCAAATTTGGTGCCGGAAATGGACACGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------GCTTG-------------------ATGGTTA-TCGTCATCGACCTATCGGTTTATCGCGCCTATTTCCTTTTTTGATTTGGCATTACATAAATT-----TGTGTGCACTT-CTG--T---------TTACA----TTTG------CGTG--TTGTCAATG-TATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................AAATTTGGTGCCGGAAATGGACACG.................................................................................................................................................................................................................................................................................................................2511.00110

Generated: 05/18/2015 at 04:56 AM